HHsearch alignment of GI: 254780430 and MMDB domain: 1xhj_A_
>1xhj_A (A:) Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structure initiative, NESG, PSI; NMR {Staphylococcus epidermidis atcc 12228}
Probab=99.89 E-value=2.6e-23 Score=166.06 Aligned_cols=77 Identities=38% Similarity=0.713 Sum_probs=73.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 440268899999999987777875289759996433479999636646666689999999999999978970035539
Q gi|254780430|r 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189 (189)
Q Consensus 112 ~~~~~~~~~i~~~l~~~IrP~l~~dGG~i~~~~~~~g~v~v~~~GaC~~Cpss~~Tl~~gie~~l~~~vpev~~V~~v 189 (189)
.+++++.++|+++|++ |||+|++||||++++++++|+|||+|+|||+|||||..||+++||++||+++|++..|++|
T Consensus 3 ~~~~~~~~~I~~~Le~-IRP~L~~dGGdv~lv~v~~g~v~Vrl~GaC~gC~~s~~Tl~~~Ie~~L~~~ip~~~~V~~v 79 (88)
T 1xhj_A 3 TENPTMFDQVAEVIER-LRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEEVPGVIEVEQV 79 (88)
T ss_dssp CCCSCHHHHHHHHHHH-HHHHHHHHSCEEEEEECCSSEEEEEEESSCCSSCHHHHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred CCCHHHHHHHHHHHHH-HHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 8768899999999998-6689996799679986679999999647888980189999999999999878997779997