HHsearch results for GI: 254780430 and protein with PDBid: 1th5_A
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=99.78 E-value=1.1e-19 Score=142.42 Aligned_cols=68 Identities=22% Similarity=0.432 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHH-HCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 889999999998777787-5289759996433479999636646666689999999999999978970035539
Q gi|254780430|r 117 VVQRIKEVLDNRVRPAVA-RDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189 (189)
Q Consensus 117 ~~~~i~~~l~~~IrP~l~-~dGG~i~~~~~~~g~v~v~~~GaC~~Cpss~~Tl~~gie~~l~~~vpev~~V~~v 189 (189)
..++|+.+|+ +|||+|+ +||||++|+++++|+|+|+|+|||+||+ ||++|||++||+++|||+.|+.|
T Consensus 5 t~e~V~~vL~-eirP~L~a~dGGdvelv~i~~~~V~v~l~GaC~gC~----Tl~~~Ie~~L~~~iPei~~V~~v 73 (74)
T 1th5_A 5 NEENVEKVLN-EIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPAAVVR----TVRIAVSKKLREKIPSIQIVQLL 73 (74)
T ss_dssp SHHHHHHHHT-TTHHHHTTTTCCCCCCCEEETTEEEECCCSSSSSSS----SHHHHHHHHHHHHCTTCSEEEEC
T ss_pred CHHHHHHHHH-HHCCCHHHCCCCEEEEEEEECCEEEEEECCCCCCCH----HHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 8999999999-855223115897199999609999999737877626----69999999999979984089955