HHsearch alignment for GI: 254780431 and conserved domain: cd00090
>cd00090 HTH_ARSR Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.
Probab=90.18 E-value=0.68 Score=27.52 Aligned_cols=45 Identities=24% Similarity=0.350 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH---CCCCCC
Q ss_conf 7899999999998186588999996785434666677751---455445
Q gi|254780431|r 4 TVERIDKLKKFWSEGLSASQIAVQLGGVTRNAVIGKLHRL---FLSNRV 49 (178)
Q Consensus 4 Tderve~LkkLW~eG~SasqIA~~lGgvtRNAVIGK~hRL---gLs~R~ 49 (178)
T Consensus 6 ~~~r~~Il~~L~~~~~~~~eia~~l~-is~~~vs~hL~~L~~~Gli~~~ 53 (78)
T cd00090 6 DPTRLRILRLLLEGPLTVSELAERLG-LSQSTVSRHLKKLEEAGLVESR 53 (78)
T ss_pred CHHHHHHHHHHHHCCCCHHHHHHHHC-CCHHHHHHHHHHHHHCCCEEEE
T ss_conf 99999999999848906999987778-4878999999999988986899