HHsearch results for GI: 254780431 and protein with PDBid: 2k27_A

>2k27_A Paired box protein PAX-8; paired domain, solution structure, triple frequency, 3D NMR, induced FIT, alternative splicing, developmental protein; NMR {Homo sapiens}

Probab=90.01  E-value=0.66  Score=26.18  Aligned_cols=43  Identities=19%  Similarity=0.283  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
Q ss_conf             99999999998186588999996785434666677751455445
Q gi|254780431|r    6 ERIDKLKKFWSEGLSASQIAVQLGGVTRNAVIGKLHRLFLSNRV   49 (178)
Q Consensus         6 erve~LkkLW~eG~SasqIA~~lGgvtRNAVIGK~hRLgLs~R~   49 (178)
                      |--++.-+|-.+|+|..+||++|| ||++.|..-+.|.--.+..
T Consensus        29 ~lR~rIv~l~~~G~s~r~IArrl~-VS~stV~kil~R~retG~~   71 (159)
T 2k27_A           29 VVRQRIVDLAHQGVRPCDISRQLR-VSHGCVSKILGRYYETGSI   71 (159)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHHHHT-CCSHHHHHHHCCSSTTSCC
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHC-CCHHHHHHHHHHHHHCCCC
T ss_conf             999999999986999999999889-5999999999999863887