HHSEARCH alignment of GI: 254780431 and SCOP domain: d1ijwc_

Alignment
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=95.70  E-value=0.0062  Score=37.93  Aligned_cols=33  Identities=12%  Similarity=0.346  Sum_probs=30.6

Q ss_pred             CCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHH
Q ss_conf             7789999999999818658899999678543466
Q gi|254780431|r    3 WTVERIDKLKKFWSEGLSASQIAVQLGGVTRNAV   36 (178)
Q Consensus         3 WTderve~LkkLW~eG~SasqIA~~lGgvtRNAV   36 (178)
                      -|||.++.+++|-.+|.|-+|||+.+| |||--+
T Consensus         6 lt~~q~~~a~~l~~~G~s~~~iA~~~g-VSr~Ti   38 (47)
T d1ijwc_           6 INKHEQEQISRLLEKGHPRQQLAIIFG-IGVSTL   38 (47)
T ss_dssp             SCHHHHHHHHHHHHTTCCHHHHHHHHT-CCHHHH
T ss_pred             CCHHHHHHHHHHHHCCCCHHHHHHHHC-CCHHHH
T ss_conf             999999999999988997999999979-699999


SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Recombinase DNA-binding domain
domain: HIN recombinase (DNA-binding domain)
species: Synthetic