HHsearch alignment for GI: 254780432 and conserved domain: COG0076

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism].
Probab=97.87  E-value=0.00036  Score=47.74  Aligned_cols=289  Identities=16%  Similarity=0.121  Sum_probs=138.7

Q ss_pred             HHCCCCCCHHHHHHHHHHHHHCCCCC--CCCCCHHHHHHHHH----HHHHCCC-CC--CCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             43578789999999999997314506--87578189999986----5201013-33--1235655540356777665432
Q gi|254780432|r   43 VNSLGHSHPELVAILKSQSEKLWHVS--NLYQSTQQEIFANH----LIHSTFA-DR--VFFTNSGAESVECAIKTARRYH  113 (392)
Q Consensus        43 ~~~lGh~~p~i~~a~~~q~~~~~~~~--~~~~~~~~~~la~~----L~~~~~~-~~--v~f~~SGseA~e~Aiklar~~~  113 (392)
T Consensus        64 ~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~  143 (460)
T COG0076          64 ANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERW  143 (460)
T ss_pred             EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHH
T ss_conf             56763578886799999999987347998123831588899999999999579976606796170799999999999998


Q ss_pred             HCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CHHHHHHHHHCCCCCCC--CCC
Q ss_conf             0013------478600234354656543212345532113479998643332221---00268875410123322--223
Q gi|254780432|r  114 YMAG------KTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAK---FCDLQSLKNQISNDTAA--ILI  182 (392)
Q Consensus       114 ~~~g------~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~---~~d~~~l~~~~~~~iAa--vi~  182 (392)
T Consensus       144 ~~~~~~~~~~~~~~P~ii~s~-~aH~s~~Kaa~~---------lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~  213 (460)
T COG0076         144 RKRALAESGKPGGKPNIVCSE-TAHFSFEKAARY---------LGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVG  213 (460)
T ss_pred             HHHHHHCCCCCCCCCEEEECC-CCCEEHHHHHHH---------HCCCCEEEEEECCCEEECHHHHHHHHHHHCCCCEEEE
T ss_conf             766442023446887499457-431209999998---------1885237875247505689999999987464764999


Q ss_pred             CCCCCCCCCCCC-CHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC---C-CCCC-CCCEEECC-CCCCCC-CCCC
Q ss_conf             332222112462-1012322110223457213101100344445553101---1-1245-45302103-444444-3443
Q gi|254780432|r  183 EPIQGEGGVRKV-PEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY---E-WANV-KPDIMTIA-KGMGGG-FPIG  254 (392)
Q Consensus       183 Epv~g~~G~~~~-~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~---e-~~gi-~PDi~~~g-K~l~gG-~P~s  254 (392)
T Consensus       214 -----~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~---pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G  285 (460)
T COG0076         214 -----TAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLL---PFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCG  285 (460)
T ss_pred             -----ECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHH---HCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCE
T ss_conf             -----72688887778899999999976997898734400211---0247422535178882089988642778888706


Q ss_pred             CCCCCCC--CCC------CCCCC-C-CCCCCCCCCC--CHHHHHHHHHHHHCCCCCCHHH---HHCCHHHHHHHHHHHHC
Q ss_conf             2100011--122------22233-2-2345321111--0012334554320122210112---10000268899998867
Q gi|254780432|r  255 ACLATNE--VAA------CMNQG-S-HGSTYGGNVL--AMVLGEKVLNIIQSDGFLENVI---NIAKILFEGLTAIKNRF  319 (392)
Q Consensus       255 av~~~~~--i~~------~~~~~-~-~~~T~~gnpl--~~aaa~a~L~~l~~~~l~~~~~---~~g~~l~~~L~~l~~~~  319 (392)
T Consensus       286 ~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~--~  363 (460)
T COG0076         286 VVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLG--D  363 (460)
T ss_pred             EEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--C
T ss_conf             99996889846776123667787786663688505418999999999996788899999999999999999986478--8


Q ss_pred             CCEEEEECCCEEEEEEEECCC---HHHHHHHHHHCCE
Q ss_conf             970755046400999872499---8999999996898
Q gi|254780432|r  320 PNMFLEVRGQGLLIGLKTVFS---PALLAAKFRDECL  353 (392)
Q Consensus       320 ~~~v~~vRG~Gl~~~ie~~~~---~~~~~~~l~~~Gl  353 (392)
T Consensus       364 ~e~~~--~p~l~~V~fr~~~~~~~~~~~~~~~~~~gw  398 (460)
T COG0076         364 FELVN--EPELPIVAFRLKDDEDTLADLSERLDRRGW  398 (460)
T ss_pred             CEEEC--CCCCEEEEEECCCCCCCHHHHHHHHHHCCC
T ss_conf             27633--886507999657643202314789986297