HHsearch alignment for GI: 254780432 and conserved domain: COG0112
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism].
Probab=97.54 E-value=0.0095 Score=38.41 Aligned_cols=313 Identities=18% Similarity=0.200 Sum_probs=147.5
Q ss_pred CHHHHHHHHHHHHH-CCCC--CCC-CC-CH---HHHHHHH-HHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999999973-1450--687-57-81---8999998-6520101333123-5655540356777665432001347
Q gi|254780432|r 50 HPELVAILKSQSEK-LWHV--SNL-YQ-ST---QQEIFAN-HLIHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKT 119 (392)
Q Consensus 50 ~p~i~~a~~~q~~~-~~~~--~~~-~~-~~---~~~~la~-~L~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t 119 (392)
T Consensus 39 S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~-All------~p 111 (413)
T COG0112 39 SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYL-ALL------QP 111 (413)
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH-HHC------CC
T ss_conf 89999997457753011589976356787217999999999999984887504588875689999999-973------89
Q ss_pred CCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 860023435465654-321-234553211347999864333222100268875410123322223332222112462101
Q gi|254780432|r 120 NKFRIVTFEGAFHGR-TLA-TISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEE 197 (392)
Q Consensus 120 ~r~~ii~~~~~yHG~-t~~-a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~ 197 (392)
T Consensus 112 G-D~imgm~l~~GGHltHg~~v~~sG~~-~~~v~Y~vd~et~~IDyD~~~k~a~e~kPKl---ii---~G~-SaY~r~id 182 (413)
T COG0112 112 G-DTIMGLDLSHGGHLTHGSPVNFSGKL-FNVVSYGVDPETGLIDYDEVEKLAKEVKPKL---II---AGG-SAYSRPID 182 (413)
T ss_pred C-CEEEECCCCCCCCCCCCCCCCCCCCE-EEEEECCCCCCCCCCCHHHHHHHHHHHCCCE---EE---ECC-CCCCCCCC
T ss_conf 8-85750567878765579987766405-7767624063347517999999999849978---99---776-03554467
Q ss_pred HHHHHHCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCCCCCEE--ECCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCC
Q ss_conf 232211022345721310110-03444455531011124545302--1034444443443210-001-112222233223
Q gi|254780432|r 198 FLQQLRKICDDIDALLIFDEV-QTGYGRTGKLFAYEWANVKPDIM--TIAKGMGGGFPIGACL-ATN-EVAACMNQGSHG 272 (392)
Q Consensus 198 ~l~~l~~lc~~~g~llI~DEV-~tG~GRtG~~f~~e~~gi~PDi~--~~gK~l~gG~P~sav~-~~~-~i~~~~~~~~~~ 272 (392)
T Consensus 183 -~~~~reIad~VGA~L~~DmAHiaGLVA~G~~-p-~P~~-~AdvVTtTTHKTlrG--PrGG~Il~~~eel~kkin~aVFP 256 (413)
T COG0112 183 -FKRFREIADEVGAYLMVDMAHVAGLIAGGVH-P-NPLP-HADVVTTTTHKTLRG--PRGGIILTNDEELAKKINSAVFP 256 (413)
T ss_pred -HHHHHHHHHHHCCEEEEHHHHHHHHHHCCCC-C-CCCC-CCCEEECCCCCCCCC--CCCEEEEECCHHHHHHHHHHCCC
T ss_conf -8999999987193677217788888745667-9-9987-552675775347789--98417983629999876400077
Q ss_pred CCCCCCCCC--HHHHHHHHHHHHCCC---CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE-EEEEEEECC---CHHH
Q ss_conf 453211110--012334554320122---2101121000026889999886797075504640-099987249---9899
Q gi|254780432|r 273 STYGGNVLA--MVLGEKVLNIIQSDG---FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG-LLIGLKTVF---SPAL 343 (392)
Q Consensus 273 ~T~~gnpl~--~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G-l~~~ie~~~---~~~~ 343 (392)
T Consensus 257 g~qg-gpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~--G~-~vvs--GgTdnHl~lVDl~~~~~~Gk~ 330 (413)
T COG0112 257 GLQG-GPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER--GF-KVVS--GGTDNHLVLVDLRSKGLTGKK 330 (413)
T ss_pred CCCC-CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC--CC-EEEC--CCCCCEEEEEECCCCCCCHHH
T ss_conf 6678-8278889999999999728138999999999999999999976--98-6715--886444899972467987789
Q ss_pred HHHHHHHCCEEEE----E------CCCCEEEECCC-C---CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999996898996----2------68988995589-8---688999999999999999985
Q gi|254780432|r 344 LAAKFRDECLLTA----P------SSDNVVRILPP-L---TITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 344 ~~~~l~~~Gll~~----~------~~~~~irl~Pp-l---~it~~eid~~i~~l~~al~~L 390 (392)
T Consensus 331 ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~ 391 (413)
T COG0112 331 AEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGL 391 (413)
T ss_pred HHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 9999997097652688999998887876634066888635798899999999999999550