HHsearch alignment for GI: 254780432 and conserved domain: COG1168
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].
Probab=99.19 E-value=4e-09 Score=80.14 Aligned_cols=342 Identities=18% Similarity=0.234 Sum_probs=192.4
Q ss_pred EECCCEEEECCC-CEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCCCCCCCCCCH-HHHHHHHHHHHHCC----CCCC
Q ss_conf 501037996799-76464102267435787-89999999999997314506875781-89999986520101----3331
Q gi|254780432|r 20 KGKGAWLFSENG-IPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLWHVSNLYQST-QQEIFANHLIHSTF----ADRV 92 (392)
Q Consensus 20 ~a~G~~i~d~dG-~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~~~~~~~~~~-~~~~la~~L~~~~~----~~~v 92 (392)
T Consensus 11 ~~t~s~KWd~~~g~~--DvlPm-WVADMDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i 86 (388)
T COG1168 11 LGTNSLKWDAHPGNE--DVLPM-WVADMDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWI 86 (388)
T ss_pred CCCCCEECCCCCCCC--CCCEE-EEECCCCCCCHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 288750025568988--84134-32004678887999999999865877887-887789999999999713777885528
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 23565554035677766543200134786002343546565432123455321134799986433322210026887541
Q gi|254780432|r 93 FFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQ 172 (392)
Q Consensus 93 ~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~ 172 (392)
T Consensus 87 ~~~p~VVpgi~~~I~~~T-------~~g-d~Vvi~tPvY~PF-~~~i~~n~R~~i~---~pL~~~~~~y-~iD~~~LE~~ 153 (388)
T COG1168 87 VFVPGVVPGISLAIRALT-------KPG-DGVVIQTPVYPPF-YNAIKLNGRKVIE---NPLVEDDGRY-EIDFDALEKA 153 (388)
T ss_pred EECCCCHHHHHHHHHHHC-------CCC-CEEEECCCCCHHH-HHHHHHCCCEEEE---CCCCCCCCCE-EECHHHHHHH
T ss_conf 983751276999999837-------699-8269648886189-9987516967974---6643469847-7529999999
Q ss_pred CCCC--CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC-CCCCCCCCCCCCC-----EEEC-
Q ss_conf 0123--32222333222211246210123221102234572131011003444455-5310111245453-----0210-
Q gi|254780432|r 173 ISND--TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG-KLFAYEWANVKPD-----IMTI- 243 (392)
Q Consensus 173 ~~~~--iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG-~~f~~e~~gi~PD-----i~~~- 243 (392)
T Consensus 154 ~~~~~vkl~iLCnPHN-P~G-rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~--~a~ls~~~a~~~it~~s 229 (388)
T COG1168 154 FVDERVKLFILCNPHN-PTG-RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIP--FASLSERFADNSITLTS 229 (388)
T ss_pred HHCCCCCEEEEECCCC-CCC-CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC--HHHCCHHHHCCEEEEEE
T ss_conf 8437760899937999-998-6436999999999999839989830335661216987665--43269554323599840
Q ss_pred -CCCCC-CCCCCCCCCCCCC-CCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH----HHHHCCHHHHHHHHH
Q ss_conf -34444-4434432100011-1222223-32234532111100123345543201222101----121000026889999
Q gi|254780432|r 244 -AKGMG-GGFPIGACLATNE-VAACMNQ-GSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN----VINIAKILFEGLTAI 315 (392)
Q Consensus 244 -gK~l~-gG~P~sav~~~~~-i~~~~~~-~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~----~~~~g~~l~~~L~~l 315 (392)
T Consensus 230 aSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~--G~~WLd~L~~yl~~N~~~~~~~l~~- 306 (388)
T COG1168 230 ASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQ--GEPWLDELLEYLKDNRDYVADFLNK- 306 (388)
T ss_pred CCCCCCCHHHHHEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 5221560444421478348899999999998733799846889999999972--6499999999999989999999986-
Q ss_pred HHHCCCE-EEEECCCEEEEEEEE---CCCHHHHHHHHHHCC-E------EEEECCCCEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 8867970-755046400999872---499899999999689-8------9962689889955898688999999999999
Q gi|254780432|r 316 KNRFPNM-FLEVRGQGLLIGLKT---VFSPALLAAKFRDEC-L------LTAPSSDNVVRILPPLTITAEEIHEGLERIE 384 (392)
Q Consensus 316 ~~~~~~~-v~~vRG~Gl~~~ie~---~~~~~~~~~~l~~~G-l------l~~~~~~~~irl~Ppl~it~~eid~~i~~l~ 384 (392)
T Consensus 307 --~~P~v~v~~p~gTYL~W-LD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN--~acpr~~L~eal~ri~ 381 (388)
T COG1168 307 --HLPGVKVTEPQGTYLAW-LDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLN--FACPRAILEEALERLK 381 (388)
T ss_pred --HCCCCEEECCCCCEEEE-EECCCCCCCHHHHHHHHHHHHCEECCCCCCCCCCCCCEEEEE--CCCCHHHHHHHHHHHH
T ss_conf --59874786688756665-320023898578999999751571357875676787458886--3798899999999999
Q ss_pred HHHHHH
Q ss_conf 999985
Q gi|254780432|r 385 RTAIKL 390 (392)
Q Consensus 385 ~al~~L 390 (392)
T Consensus 382 ~al~~~ 387 (388)
T COG1168 382 RALKKR 387 (388)
T ss_pred HHHHCC
T ss_conf 998525