HHsearch alignment for GI: 254780432 and conserved domain: COG2008
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism].
Probab=99.29 E-value=1.7e-10 Score=89.06 Aligned_cols=312 Identities=19% Similarity=0.227 Sum_probs=166.4
Q ss_pred EECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 64102267435787899999999999973145068757818-99999865201013331235655540356777665432
Q gi|254780432|r 35 LDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQ-QEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYH 113 (392)
Q Consensus 35 iD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~-~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~ 113 (392)
T Consensus 2 ~~f~SDn~----~g~~~~m~eam~~a~~---~~~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~--- 71 (342)
T COG2008 2 IDFRSDNV----AGPTPEMREALAAANA---VGDDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHC--- 71 (342)
T ss_pred CCCCCCCC----CCCCHHHHHHHHHCCC---CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHC---
T ss_conf 73555766----7879999999985524---5787778888999999999998577449992684388899999864---
Q ss_pred HCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC------CCCCCCCCCCCC
Q ss_conf 0013478600234354656543--21234553211347999864333222100268875410------123322223332
Q gi|254780432|r 114 YMAGKTNKFRIVTFEGAFHGRT--LATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQI------SNDTAAILIEPI 185 (392)
Q Consensus 114 ~~~g~t~r~~ii~~~~~yHG~t--~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~------~~~iAavi~Epv 185 (392)
T Consensus 72 ----~~~~~-vi~~~~a-Hi~~~E~Ga~~~------~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~ 139 (342)
T COG2008 72 ----QPGES-VICHETA-HIYTDECGAPEF------FGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENT 139 (342)
T ss_pred ----CCCCE-EEEECCC-CCEECCCCCHHH------HCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEC
T ss_conf ----89976-9985253-120235675888------73885430479877873999999763677765588750798613
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC-------CCCEEECCCCCCCCCCCCCCCC
Q ss_conf 222112462101232211022345721310110034444555310111245-------4530210344444434432100
Q gi|254780432|r 186 QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV-------KPDIMTIAKGMGGGFPIGACLA 258 (392)
Q Consensus 186 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi-------~PDi~~~gK~l~gG~P~sav~~ 258 (392)
T Consensus 140 ~te~Gt-Vy~l~el~~i~~~~k~~~l~LHmDGA-----R~~n--A~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~ 211 (342)
T COG2008 140 ATEGGT-VYPLDELEAISAVCKEHGLPLHMDGA-----RLAN--ALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVF 211 (342)
T ss_pred CCCCCE-ECCHHHHHHHHHHHHHHCCCEEECHH-----HHHH--HHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEE
T ss_conf 677866-64899999999999980995440408-----8988--998739888998742889999131477521325897
Q ss_pred -CCCCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHCCCCC----CHHHHHCCHHHHHHHHHHHHCCCE--EEEECCC
Q ss_conf -0111222223--322345321111001233455432012221----011210000268899998867970--7550464
Q gi|254780432|r 259 -TNEVAACMNQ--GSHGSTYGGNVLAMVLGEKVLNIIQSDGFL----ENVINIAKILFEGLTAIKNRFPNM--FLEVRGQ 329 (392)
Q Consensus 259 -~~~i~~~~~~--~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~----~~~~~~g~~l~~~L~~l~~~~~~~--v~~vRG~ 329 (392)
T Consensus 212 gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l----~~~~~~~~~~Han~mA~~La~~~~~~----~G~~~~~~~~tN 283 (342)
T COG2008 212 GNRDFAKRARRWRKRAGGLMRKARFLAAQGLYAL----EDDVWRLAADHANAMAARLAEGLEAK----PGVKLAFPVETN 283 (342)
T ss_pred CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHHHHHHHC----CCCEECCCCCCC
T ss_conf 3899999989999986562766548999999997----31588888788899999999765326----894343677662
Q ss_pred EEEEEEEECCC---HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 00999872499---89999999968989962689889955898688999999999999999
Q gi|254780432|r 330 GLLIGLKTVFS---PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 330 Gl~~~ie~~~~---~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
T Consensus 284 ~vf~~--l~~~~i~~l~~~~~~~~~~~~~~~~~-~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 284 MVFVR--LPESAIEALRLAGALFYRGVLIGAHG-EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred EEEEE--CCHHHHHHHHHHCHHHEEEEECCCCC-CEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 79997--77678899975152120012215777-558998502499999999999999964