HHsearch alignment for GI: 254780432 and conserved domain: PRK00854
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed.
Probab=100.00 E-value=0 Score=778.64 Aligned_cols=384 Identities=33% Similarity=0.589 Sum_probs=364.3
Q ss_pred CCCCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 84314515588887489850103799679976464102267435787899999999999973145068757818999998
Q gi|254780432|r 2 NKNDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFAN 81 (392)
Q Consensus 2 ~~~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~ 81 (392)
T Consensus 14 ~~~~~~~~~y~p~Pivi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~l~~ 93 (404)
T PRK00854 14 TEQRLGAHNYKPLDVVLTRGEGVWVWDTDGRRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYE 93 (404)
T ss_pred HHHHHCCCCCCCCCEEEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 99874588889898479985759999799999988262999775427979999999999856786555426579999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 652010133312356555403567776654320013--478600234354656543212345532113479998643332
Q gi|254780432|r 82 HLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAG--KTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFD 159 (392)
Q Consensus 82 ~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g--~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~ 159 (392)
T Consensus 94 ~l~~~~~~~~v~f~~SGsEAve~AiklAr~~~~~~~g~~tgr~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~ 173 (404)
T PRK00854 94 ELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFAPGFR 173 (404)
T ss_pred HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 99740376848855877999999999999987650378789855999645667860135434677433568889999815
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22100268875410123322223332222112462101232211022345721310110034444555310111245453
Q gi|254780432|r 160 QAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD 239 (392)
Q Consensus 160 ~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD 239 (392)
T Consensus 174 ~~p~~d~~~l~~~~~~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PD 253 (404)
T PRK00854 174 VVPFGDAAALEAAITPNTVAFLIEPIQGEAGVIIPPAGYFRRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEAD 253 (404)
T ss_pred EECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
T ss_conf 50566689999863987489999177577896179989999999999970764457500017863557414554248979
Q ss_pred EEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHH
Q ss_conf 021034444443-4432100011122222332234532111100123345543201222101121000026889999886
Q gi|254780432|r 240 IMTIAKGMGGGF-PIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNR 318 (392)
Q Consensus 240 i~~~gK~l~gG~-P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~ 318 (392)
T Consensus 254 ii~~gKgl~gG~~Pl~av~~~~~i~~~~~~~~h~~T~~gnpla~aaa~a~l~~i~~e~l~~~~~~~g~~l~~~L~~l~-- 331 (404)
T PRK00854 254 VTLIGKALSGGFYPVSAVLSNSEVLGVLRPGQHGSTFGGNPLACAVARAALRVLVEEGMIENAAEQGAYFLEGLRAIR-- 331 (404)
T ss_pred EEEECCCCCCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC--
T ss_conf 897564445887653202047999950679887788898989999999999999865899999999999999998504--
Q ss_pred CCCEEEEECCCEEEEEEEECCCH---HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 79707550464009998724998---99999999689899626898899558986889999999999999999
Q gi|254780432|r 319 FPNMFLEVRGQGLLIGLKTVFSP---ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 319 ~~~~v~~vRG~Gl~~~ie~~~~~---~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
T Consensus 332 ~-~~i~~VRG~Glm~gve~~~~~~~~~~~~~~~~~~Gll~~~~~~~~ir~~PPL~it~~eid~~l~~l~~~La 403 (404)
T PRK00854 332 G-NIVREVRGRGLMLAVELEPEAGGARQYCEALKARGLLAKDTHDHTIRLAPPLVITREQVDWAVSQIAKVLA 403 (404)
T ss_pred C-CCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 8-97276644455999998556677999999999799598748999899979957899999999999999966