HHsearch alignment for GI: 254780432 and conserved domain: PRK03715
>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional.
Probab=100.00 E-value=0 Score=771.40 Aligned_cols=384 Identities=41% Similarity=0.651 Sum_probs=361.0
Q ss_pred CCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 31451558888748985010379967997646410226743578789999999999997314506875781899999865
Q gi|254780432|r 4 NDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHL 83 (392)
Q Consensus 4 ~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L 83 (392)
T Consensus 8 ~~~~~~~~~rppivi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~~~~~~~~~~~~~~la~~L 87 (395)
T PRK03715 8 IDSLMYITNRPDIVFTHGKGSWLYDHTGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLL 87 (395)
T ss_pred CCCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 54356656999805998354889979879998823178877745896999999999997547677320278999999998
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20101333123565554035677766543200134786002343546565432123455321134799986433322210
Q gi|254780432|r 84 IHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKF 163 (392)
Q Consensus 84 ~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~ 163 (392)
T Consensus 88 ~~~~~~~~v~f~~sGsEAvE~AlKlAr~y~~~~-~~gr~~ii~~~~~yHG~T~~~~s~sg~~~~~~~~~p~~~~~~~~~~ 166 (395)
T PRK03715 88 TQHSCFDKVFFANSGAEANEGAIKLARKWGRKH-KNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAEL 166 (395)
T ss_pred HCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCC-CCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 415588879981875889999999999986246-8998459997578898740221046864445567898899675554
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 02688754101233222233322221124621012322110223457213101100344445553101112454530210
Q gi|254780432|r 164 CDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTI 243 (392)
Q Consensus 164 ~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~ 243 (392)
T Consensus 167 ~d~~~~~~~~~~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~ 246 (395)
T PRK03715 167 NDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELAGIEPDIMTL 246 (395)
T ss_pred CCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 55899997349980799993788877985298899999999995189735620110388866685300048999998997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEE
Q ss_conf 34444443443210001112222233223453211110012334554320122210112100002688999988679707
Q gi|254780432|r 244 AKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMF 323 (392)
Q Consensus 244 gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v 323 (392)
T Consensus 247 gKgl~gG~Pl~av~~~~~i~-~~~~g~~g~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~--i 323 (395)
T PRK03715 247 GKGIGGGVPLAALLAKAEVA-VFEAGDQGGTYNGNPLMTAVGYAVISQLVAPGFLEGVRARGEYLKEKLLELSAERG--L 323 (395)
T ss_pred CCHHHCCCCEEEEEECHHHC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC--C
T ss_conf 52442898528999826742-47789888798997189999999999996268999999999999999998650399--1
Q ss_pred EEECCCEEEEEEEECCCHH----HHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 5504640099987249989----9999999689899626898899558986889999999999999999852
Q gi|254780432|r 324 LEVRGQGLLIGLKTVFSPA----LLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 324 ~~vRG~Gl~~~ie~~~~~~----~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
T Consensus 324 ~~vRG~Gl~~~iel~~~~~~~~~~~~~~~~~~gll~~~~~~n~irl~PpL~it~~eid~~~~~l~~aL~~la 395 (395)
T PRK03715 324 EGERGEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTDEIDQMIAMLRSVLDKLA 395 (395)
T ss_pred EEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 357435589999967887089999999998399899228999899979943889999999999999999869