HHsearch alignment for GI: 254780432 and conserved domain: PRK04073
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional.
Probab=100.00 E-value=0 Score=789.46 Aligned_cols=383 Identities=38% Similarity=0.661 Sum_probs=367.2
Q ss_pred CCCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 43145155888874898501037996799764641022674357878999999999999731450687578189999986
Q gi|254780432|r 3 KNDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANH 82 (392)
Q Consensus 3 ~~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~ 82 (392)
T Consensus 11 ~~~y~~~~y~~~P~~i~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~e~ 90 (396)
T PRK04073 11 TNHYGAHNYHPLPIVISEAEGVWVKDPEGNKYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEK 90 (396)
T ss_pred HHHHCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 87626788899996289736599998989999994517887630379799999999998417876653243478999999
Q ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 5201013331235655540356777665432001--34786002343546565432123455321134799986433322
Q gi|254780432|r 83 LIHSTFADRVFFTNSGAESVECAIKTARRYHYMA--GKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQ 160 (392)
Q Consensus 83 L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~--g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~ 160 (392)
T Consensus 91 l~~l~~~~~v~f~~sGseAvE~AlklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~p~~~~~~~ 170 (396)
T PRK04073 91 VAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEAEYKRGFGPMLPGIKK 170 (396)
T ss_pred HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEE
T ss_conf 99752836489618788899999999999987623788898779997775004532052226764334577899998232
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 21002688754101233222233322221124621012322110223457213101100344445553101112454530
Q gi|254780432|r 161 AKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDI 240 (392)
Q Consensus 161 ~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi 240 (392)
T Consensus 171 ~p~~d~~~l~~~~~~~~AAvi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDi 250 (396)
T PRK04073 171 IPYGDVEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVKPDM 250 (396)
T ss_pred CCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEECCCCCCCCCCEECCCCCCCE
T ss_conf 57521667886148975699998987778977899899999999999839935266341078865763001004689880
Q ss_pred EECCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHC
Q ss_conf 2103444444-344321000111222223322345321111001233455432012221011210000268899998867
Q gi|254780432|r 241 MTIAKGMGGG-FPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRF 319 (392)
Q Consensus 241 ~~~gK~l~gG-~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~ 319 (392)
T Consensus 251 v~~gK~l~gG~~P~~av~~~~~i~~~~~~~~h~~T~~gnpla~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l--~~ 328 (396)
T PRK04073 251 YILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALDVIEEEKLPERSLELGEYFKEQLKEI--DN 328 (396)
T ss_pred EECCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC--CC
T ss_conf 1025345578776058960789996166899760548898999999999999987579999999999999999825--89
Q ss_pred CCEEEEECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 970755046400999872499899999999689899626898899558986889999999999999999
Q gi|254780432|r 320 PNMFLEVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 320 ~~~v~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
T Consensus 329 ~-~i~~vRG~Gl~~giel~~~~~~~~~~~~~~Gll~~~~~~~~ir~~PpL~it~~eid~~l~~l~~~L~ 396 (396)
T PRK04073 329 P-MIKEVRGRGLFIGVELNEPARPYCEALKEEGLLCKETHETVIRFAPPLVISKEELDWALEKIKAVLS 396 (396)
T ss_pred C-CEEECCCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 9-7487233779999995875899999999499799527999899979936899999999999999859