HHsearch alignment for GI: 254780432 and conserved domain: PRK04612
>PRK04612 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional.
Probab=100.00 E-value=0 Score=785.97 Aligned_cols=386 Identities=40% Similarity=0.700 Sum_probs=367.1
Q ss_pred CCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 31451558888748985010379967997646410226743578789999999999997314506875781899999865
Q gi|254780432|r 4 NDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHL 83 (392)
Q Consensus 4 ~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L 83 (392)
T Consensus 12 ~~~~~~~y~p~pivi~r~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Ai~~Q~~~l~~~~~~~~~~~~~~lae~L 91 (408)
T PRK04612 12 AHYYLPVYRPRQVVLERGQGSRVWDDQGREYLDLSSGIAVSGLGHNDPDLVAALTEQAGKLWHTSNVFFSAPPLKLAEEL 91 (408)
T ss_pred HHCCCCCCCCCCEEEEEEECCEEEECCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 87074657999716998563999969889999924507751225898999999999986525766752265899999999
Q ss_pred HHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20101-333123565554035677766543200134-7860023435465654321234553211347999864333222
Q gi|254780432|r 84 IHSTF-ADRVFFTNSGAESVECAIKTARRYHYMAGK-TNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQA 161 (392)
Q Consensus 84 ~~~~~-~~~v~f~~SGseA~e~Aiklar~~~~~~g~-t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~ 161 (392)
T Consensus 92 ~~~~~~~~~v~f~~SGsEAvE~AlKlAr~y~~~~G~~~~k~~ii~~~~syHG~t~~als~t~~~~~~~~~~p~p~~~~~~ 171 (408)
T PRK04612 92 VTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLASVTATAQPKYQEGYEPLPGGFRYV 171 (408)
T ss_pred HHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEC
T ss_conf 72268876699718746899999999999987328877776999985852598767422567843346888998852543
Q ss_pred CCHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 100268875410-1233222233322221124621012322110223457213101100344445553101112454530
Q gi|254780432|r 162 KFCDLQSLKNQI-SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDI 240 (392)
Q Consensus 162 ~~~d~~~l~~~~-~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi 240 (392)
T Consensus 172 ~~~d~~~le~~~~~~~iAAvivEPi~g~gG~~~~~~~yl~~l~~lc~~~gillI~DEV~TGfGRtG~~fa~~~~~v~PDi 251 (408)
T PRK04612 172 DFNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDI 251 (408)
T ss_pred CCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCE
T ss_conf 66749999971569978999997867888830689999999999997569469850122478867620355512899998
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCC
Q ss_conf 21034444443443210001112222233223453211110012334554320122210112100002688999988679
Q gi|254780432|r 241 MTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFP 320 (392)
Q Consensus 241 ~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 320 (392)
T Consensus 252 i~~gKglg~G~Pl~av~~~~~i~~~~~~~~h~~T~~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~- 330 (408)
T PRK04612 252 VTLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEF- 330 (408)
T ss_pred EEEEHHHCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC-
T ss_conf 9972322388762899986888851468997888873599999999999999866699999999999999999987407-
Q ss_pred CEEEEECCCEEEEEEEECCC----HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 70755046400999872499----89999999968989962689889955898688999999999999999985
Q gi|254780432|r 321 NMFLEVRGQGLLIGLKTVFS----PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 321 ~~v~~vRG~Gl~~~ie~~~~----~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
T Consensus 331 ~~i~~vRG~GLm~giel~~~~~~~~~~i~~~~~~~Gll~~~~g~~~irl~PPL~it~~eide~l~~l~~al~~~ 404 (408)
T PRK04612 331 GVFAQIRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRLALAAY 404 (408)
T ss_pred CCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 98883220446999995478862699999999978919931799979996883388999999999999999999