HHsearch alignment for GI: 254780432 and conserved domain: PRK05093
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed.
Probab=100.00 E-value=0 Score=808.41 Aligned_cols=387 Identities=45% Similarity=0.763 Sum_probs=374.0
Q ss_pred CCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 31451558888748985010379967997646410226743578789999999999997314506875781899999865
Q gi|254780432|r 4 NDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHL 83 (392)
Q Consensus 4 ~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L 83 (392)
T Consensus 12 ~~~~~~~y~p~pivi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~I~~Ai~~Q~~~l~~~~~~~~~~~~~~lae~L 91 (403)
T PRK05093 12 DEVMVPNYAPAAFIPVRGEGSRVWDQQGREYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKL 91 (403)
T ss_pred HHHCCCCCCCCCCCEEEEECCEEEECCCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 86305879999830898562989979979999955088850328997999999999987557775741488999999998
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20101333123565554035677766543200134786002343546565432123455321134799986433322210
Q gi|254780432|r 84 IHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKF 163 (392)
Q Consensus 84 ~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~ 163 (392)
T Consensus 92 ~~~~~~drv~f~~SGSEAvE~AiklAr~~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~~g~~~~~~~~~p~~~~~~~~p~ 171 (403)
T PRK05093 92 VDATFAERVFFANSGAEANEAALKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF 171 (403)
T ss_pred HHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCEECCC
T ss_conf 64168775998386778999999999999997289987547777588688836877625880110277899977565563
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 02688754101233222233322221124621012322110223457213101100344445553101112454530210
Q gi|254780432|r 164 CDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTI 243 (392)
Q Consensus 164 ~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~ 243 (392)
T Consensus 172 ~d~~~l~~~~~~~iaAviiEPi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~ 251 (403)
T PRK05093 172 NDLAALKAVIDDKTCAVVVEPIQGEGGVIPATPEFLQGLRELCDKHNALLIFDEVQTGMGRTGDLYAYMHYGVTPDILTS 251 (403)
T ss_pred CCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 36888860337744799995766789975899999999998630168379860134268877775222368989988997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEE
Q ss_conf 34444443443210001112222233223453211110012334554320122210112100002688999988679707
Q gi|254780432|r 244 AKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMF 323 (392)
Q Consensus 244 gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v 323 (392)
T Consensus 252 gKglggG~Plsav~~~~~i~~~~~~~~~g~T~~g~pla~aaala~L~~i~~~~l~~~a~~~G~~l~~~L~~l~~~~~-~i 330 (403)
T PRK05093 252 AKALGGGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKAREQRFVDGLQKINEKYG-VF 330 (403)
T ss_pred CCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC-CE
T ss_conf 30015886427998728878650787726589858999999999999996344999999999999999999986289-82
Q ss_pred EEECCCEEEEEEEECCC----HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 55046400999872499----899999999689899626898899558986889999999999999999852
Q gi|254780432|r 324 LEVRGQGLLIGLKTVFS----PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 324 ~~vRG~Gl~~~ie~~~~----~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
T Consensus 331 ~~VRG~Glm~giel~~~~~~~a~~i~~~~~~~Gll~~~~g~n~irl~PPL~it~~eid~~l~~l~~al~eV~ 402 (403)
T PRK05093 331 SEIRGKGLLIGAELNEQYKGRARDFLYAAAEEGVMVLVAGPDVLRFAPSLVIPDADIDEGLARFEKAVAKVV 402 (403)
T ss_pred EEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 666541269999965875216999999999689289527999799978844899999999999999999985