HHsearch alignment for GI: 254780432 and conserved domain: PRK05939

>PRK05939 hypothetical protein; Provisional.
Probab=98.80  E-value=7.2e-08  Score=71.92  Aligned_cols=165  Identities=13%  Similarity=0.251  Sum_probs=111.5

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             50687578189999986520101333123565554035677766543200134786002343546565432123455321
Q gi|254780432|r   66 HVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL  145 (392)
Q Consensus        66 ~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~  145 (392)
T Consensus        38 ~~YsR~~nPT~~~le~~la~LEgg~~a~~~sSGMaAi~~~l~-~ll------~~Gd-~il~~~~~YG~t~~l-~---~~-  104 (396)
T PRK05939         38 FTYARQGTPTTAALEAKITEMEGGVGTVCFATGMAAIAAVFL-TLL------RAGD-HLVSSQYLFGNTNSL-L---GT-  104 (396)
T ss_pred             CEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-HHC------CCCC-EEEECCCCCCHHHHH-H---HH-
T ss_conf             634089986799999999998299749996579999999999-835------8898-899538869229999-9---98-


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
Q ss_conf             13479998643332221002688754101233222233322221124621012322110223457213101100344445
Q gi|254780432|r  146 QYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRT  225 (392)
Q Consensus       146 ~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRt  225 (392)
T Consensus       105 --l~~~GI---~v~~vd~~d~~~~~~ai~~~Tklv~~EspsNP~-l~v~D---i~~i~~ia~~~g~~~vVDNT~at----  171 (396)
T PRK05939        105 --LQGLGV---EVTMVDATDVQQVAAAIRPNTRMVFVETIANPG-TQVAD---LAGIGALCRERGLVYVVDNTMTS----  171 (396)
T ss_pred             --HHHCCE---EEEEECCCCHHHHHHHHCCCCCEEEEEECCCCC-CCCCC---HHHHHHHHHHCCCEEEEECCCCH----
T ss_conf             --653186---999988979899998618566189998089998-70758---99999999983997999777630----


Q ss_pred             CCCCCCCCCCCCCCEEE--CCCCCCCC-CCCCCCCC
Q ss_conf             55310111245453021--03444444-34432100
Q gi|254780432|r  226 GKLFAYEWANVKPDIMT--IAKGMGGG-FPIGACLA  258 (392)
Q Consensus       226 G~~f~~e~~gi~PDi~~--~gK~l~gG-~P~sav~~  258 (392)
T Consensus       172 --P~~~~Pl~~GaDivvhS~TKyi~GhsD~l~G~vv  205 (396)
T PRK05939        172 --PWLFRPKSVGASLVINSLSKYIAGHGNALGGAVT  205 (396)
T ss_pred             --HHHCCHHHHCCCEEEEECCCCCCCCCCEEEEEEE
T ss_conf             --4205855638988998343302588774769996