HHsearch alignment for GI: 254780432 and conserved domain: PRK05968
>PRK05968 hypothetical protein; Provisional.
Probab=99.00 E-value=6.1e-09 Score=78.93 Aligned_cols=282 Identities=14% Similarity=0.104 Sum_probs=165.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45068757818999998652010133312356555403567776654320013478600234354656543212345532
Q gi|254780432|r 65 WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 65 ~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
T Consensus 54 g~~YsR~~NPT~~~lE~~la~LEgg~~a~~~sSGmaAis~~l~-~ll------~~Gd~-iv~~~~~YggT~~l~~----- 120 (389)
T PRK05968 54 RPIYTRGDNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVL-SFV------EPGDR-IVAVRHVYPDAYRLFG----- 120 (389)
T ss_pred CCEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-HHH------CCCCE-EEECCCCCCCHHHHHH-----
T ss_conf 9614289886699999999998299638885488999999999-960------89998-9858876675899999-----
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 11347999864333222100268875410123322223332222112462101232211022345721310110034444
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
T Consensus 121 -~~l~~~GI---~v~~vd~~d~~~~~~~i~-~Tklv~~EtpsNP~-l~v~D---I~~ia~iA~~~g~~~vVDNTfa---- 187 (389)
T PRK05968 121 -TLLKRMGV---EVDYVDGRDEEAVAKALP-GAKLLYLESPTSWV-FELQD---IAALAALAKRHGVVTVIDNSWA---- 187 (389)
T ss_pred -HHHHCCCC---EEEEECCCCHHHHHHCCC-CCCEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCEEEEECCCC----
T ss_conf -88860784---699968999999996276-87289997899988-72738---9999999998399599977861----
Q ss_pred CCCCCCCCCCCCCCCEEE--CCCCCCC-C-CCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCHHHHHHHHHHHH--CC
Q ss_conf 555310111245453021--0344444-4-34432100011122222332---23453211110012334554320--12
Q gi|254780432|r 225 TGKLFAYEWANVKPDIMT--IAKGMGG-G-FPIGACLATNEVAACMNQGS---HGSTYGGNVLAMVLGEKVLNIIQ--SD 295 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~~--~gK~l~g-G-~P~sav~~~~~i~~~~~~~~---~~~T~~gnpl~~aaa~a~L~~l~--~~ 295 (392)
T Consensus 188 --tP~~~~Pl~~GaDivvhS~TKyi~GHsDvl~G~v~~~~~~~~~~~~~~~~~lG~~l--sP~~a~l~lRGL~TL~lRm~ 263 (389)
T PRK05968 188 --SPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGGKL--SPFEAWLLLRGLRTLPLRMK 263 (389)
T ss_pred --HHHHCCHHHHCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCC--CHHHHHHHHCCCCCHHHHHH
T ss_conf --16425842407987997045344689884426994569999999999998627778--85888999847986999999
Q ss_pred CCCCHHHHHCCHHHHHHHHHHHHCCCEEEE-------------ECCCEEEEEEEECCCHHHHHHHHHHCC-EEEE-----
Q ss_conf 221011210000268899998867970755-------------046400999872499899999999689-8996-----
Q gi|254780432|r 296 GFLENVINIAKILFEGLTAIKNRFPNMFLE-------------VRGQGLLIGLKTVFSPALLAAKFRDEC-LLTA----- 356 (392)
Q Consensus 296 ~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~-------------vRG~Gl~~~ie~~~~~~~~~~~l~~~G-ll~~----- 356 (392)
T Consensus 264 rh~~nA~~vA~~L--------~~hp~-V~~V~yPgL~shp~~~l~g~gg~~sf~l~~~~-~-~~~f~~~L~lf~~a~SlG 332 (389)
T PRK05968 264 AHEASALLIARRL--------KAHPV-VETVCHPALANHPPAGLSGTSGLFSFIFREGV-D-VRRFADALKLFRLGVSWG 332 (389)
T ss_pred HHHHHHHHHHHHH--------HHCCC-CCEEECCCCCCCHHHHCCCCCEEEEEEECCHH-H-HHHHHHHCCCCEEECCCC
T ss_conf 9999999999999--------61999-86633888522313421786437999957779-9-999998488075631668
Q ss_pred -------------------------ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -------------------------26898899558986889999999999999999852
Q gi|254780432|r 357 -------------------------PSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 357 -------------------------~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
T Consensus 333 g~eSLi~~~~~~~~~~~~~~~~~~~Gi~~~liRlS----VGlEd~eDLi~Dl~qAL~~a~ 388 (389)
T PRK05968 333 GHESLVVPAEVVLQQKAQPNSAARFGISPRSVRLH----VGLEGTEALWADLEQALAAAS 388 (389)
T ss_pred CCCCCCCCCHHHCCCCCCHHHHHHCCCCCCEEEEE----EEECCHHHHHHHHHHHHHHHC
T ss_conf 64302187066416779988998659694969999----310999999999999999843