HHsearch alignment for GI: 254780432 and conserved domain: PRK06939

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional.
Probab=99.97  E-value=6e-30  Score=216.27  Aligned_cols=342  Identities=18%  Similarity=0.237  Sum_probs=244.8

Q ss_pred             CCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCC-CHHHHHHHHHHHHHCCCCCC---C--CCCHHHHHHHHHH
Q ss_conf             5888874898501037996799764641022674357878-99999999999973145068---7--5781899999865
Q gi|254780432|r   10 TYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHS-HPELVAILKSQSEKLWHVSN---L--YQSTQQEIFANHL   83 (392)
Q Consensus        10 ~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~-~p~i~~a~~~q~~~~~~~~~---~--~~~~~~~~la~~L   83 (392)
T Consensus        20 ~l~R~~~~~~~~~~~~i~i~dG~~~lnf~Sn---dYLGL~~~p~v~~a~~~a~~~yG~gs~~Srl~~G~~~~h~~LE~~l   96 (395)
T PRK06939         20 GLYKEERVITSPQGADITVADGKEVINFCAN---NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEQKL   96 (395)
T ss_pred             CCCCCCCCCCCCCCCEEEEECCCEEEEEECC---CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             9986452214788875895389389997767---6557889989999999999972999877685747839999999999


Q ss_pred             HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             20101333123565554035677766543200134786002343546565432123455321134799986433322210
Q gi|254780432|r   84 IHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKF  163 (392)
Q Consensus        84 ~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~  163 (392)
T Consensus        97 A~~~g~e~allf~SGy~aN~~~i~aL---------~~~~d~i~~D~l~HaSiidG~~ls~------------a~~~~f~H  155 (395)
T PRK06939         97 AKFLGTEDAILYSSCFDANGGLFETL---------LGKEDAIISDALNHASIIDGVRLCK------------AKRYRYAN  155 (395)
T ss_pred             HHHHCCCCEEEECCHHHHHHHHHHHH---------CCCCCEEEEECCCCHHHHHHHHHCC------------CCEEEECC
T ss_conf             99869994999755277678899996---------4799889984563588999998658------------94799668


Q ss_pred             HHHHHHHHHCCC------CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCC-C-CCCCCCCCCCCCCC
Q ss_conf             026887541012------332222333222211246210123221102234572131011003-4-44455531011124
Q gi|254780432|r  164 CDLQSLKNQISN------DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQT-G-YGRTGKLFAYEWAN  235 (392)
Q Consensus       164 ~d~~~l~~~~~~------~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G-~GRtG~~f~~e~~g  235 (392)
T Consensus       156 nD~~~Le~~L~~~~~~~~~~~~ivtegVfSMdGDiap----L~~l~~L~~~y~a~L~vDeAH~~GvlG~~G~G~-~e~~g  230 (395)
T PRK06939        156 NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAN----LPEICDLADKYDALVMVDDSHAVGFLGENGRGT-VEHCG  230 (395)
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC----HHHHHHHHHHHCEEEEEECCCCEEEECCCCCCH-HHHCC
T ss_conf             9999999999960021586289999667777876015----999999999727379861430000345899867-99809


Q ss_pred             CC--CCEE--ECCCCCC---CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHCC-CCCCHHHHHC
Q ss_conf             54--5302--1034444---443443210001112222233223--45321111001233455432012-2210112100
Q gi|254780432|r  236 VK--PDIM--TIAKGMG---GGFPIGACLATNEVAACMNQGSHG--STYGGNVLAMVLGEKVLNIIQSD-GFLENVINIA  305 (392)
Q Consensus       236 i~--PDi~--~~gK~l~---gG~P~sav~~~~~i~~~~~~~~~~--~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g  305 (392)
T Consensus       231 l~~~vdi~~gTlsKA~~G~~Ggf----v~g~~~~i~~l~~~~r~~ifStalpp~~~aa~~~al~~~~~~~~~r~~L~~n~  306 (395)
T PRK06939        231 VMDRVDIITGTLGKALGGASGGY----TAGKKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENA  306 (395)
T ss_pred             CCCCCEEEECCCHHHHHCCCCCE----EECCHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_conf             99886899773276662476514----51667889999984712211579987999999999999874959999999999


Q ss_pred             CHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEE-------ECCCCEEEECCCCCCCHHHH
Q ss_conf             00268899998867970755046400999872499--8999999996898996-------26898899558986889999
Q gi|254780432|r  306 KILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTA-------PSSDNVVRILPPLTITAEEI  376 (392)
Q Consensus       306 ~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~-------~~~~~~irl~Ppl~it~~ei  376 (392)
T Consensus       307 ~~~r~~l~~~g~~~~~------s~spI~pi~iG~~~~a~~~~~~L~~~Gi~v~~ir~PtVp~g~~rlRi~lta~ht~~di  380 (395)
T PRK06939        307 RYFREGMTAAGFTLGP------GEHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQL  380 (395)
T ss_pred             HHHHHHHHHCCCCCCC------CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHH
T ss_conf             9999999967998689------9999799996999999999999997797482078998898985699887877999999


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             99999999999985
Q gi|254780432|r  377 HEGLERIERTAIKL  390 (392)
Q Consensus       377 d~~i~~l~~al~~L  390 (392)
T Consensus       381 d~lv~~l~~v~~~l  394 (395)
T PRK06939        381 DRAIDAFEKVGKEL  394 (395)
T ss_pred             HHHHHHHHHHHHHC
T ss_conf             99999999999963