HHsearch alignment for GI: 254780432 and conserved domain: PRK08248

Probab=98.97  E-value=5.5e-09  Score=79.18  Aligned_cols=167  Identities=16%  Similarity=0.201  Sum_probs=113.1

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             45068757818999998652010133312356555403567776654320013478600234354656543212345532
Q gi|254780432|r   65 WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK  144 (392)
Q Consensus        65 ~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~  144 (392)
T Consensus        55 g~~YsR~gnPT~~~lE~~la~LEg~~~a~~~sSGmaAis~~ll-~ll------~~Gd-hiv~~~~~YggT~~l~~-----  121 (431)
T PRK08248         55 GNIYTRIMNPTNDVFEKRIAALEGGVGALAVSSGQAAVTYSIL-NIA------SAGD-EIVSSSSLYGGTYNLFA-----  121 (431)
T ss_pred             CCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH-HHH------CCCC-EEEECCCCCCCHHHHHH-----
T ss_conf             9633189886799999999998399848995469999999999-973------7799-89972786488899987-----


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf             11347999864333222100268875410123322223332222112462101232211022345721310110034444
Q gi|254780432|r  145 LQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR  224 (392)
Q Consensus       145 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR  224 (392)
T Consensus       122 -~~l~~~Gi---~v~~vD~~d~~~~~~~i~~~Tkli~~EsPsNP~-l~v~D---i~~ia~iA~~~g~~~vVDNTfa----  189 (431)
T PRK08248        122 -HTLPKLGI---TVKFVDPSDPENFEAAITDKTKALFAETIGNPK-GDVLD---IEAVADIAHRHHIPLIVDNTFA----  189 (431)
T ss_pred             -HHHHCCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCEEEEECCCC----
T ss_conf             -42323887---999989977577997537774599960489998-74227---8999999977698599866753----


Q ss_pred             CCCCCCCCCCCCCCCEE--ECCCCCCCC-CCCCCCCC
Q ss_conf             55531011124545302--103444444-34432100
Q gi|254780432|r  225 TGKLFAYEWANVKPDIM--TIAKGMGGG-FPIGACLA  258 (392)
Q Consensus       225 tG~~f~~e~~gi~PDi~--~~gK~l~gG-~P~sav~~  258 (392)
T Consensus       190 --tP~~~~Pl~~GaDivvhS~TKYi~GHsDvlgG~vv  224 (431)
T PRK08248        190 --SPYLLRPIEFGADIVVHSATKFIGGHGTSIGGVIV  224 (431)
T ss_pred             --CHHHCCHHHHCCCEEEEECCEECCCCCCEEEEEEE
T ss_conf             --03215834528988999665123688753547997