HHsearch alignment for GI: 254780432 and conserved domain: PRK13238
>PRK13238 tnaA tryptophanase; Provisional.
Probab=98.52 E-value=3.5e-06 Score=60.85 Aligned_cols=325 Identities=17% Similarity=0.182 Sum_probs=164.7
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 997646410226743578789999999999997314506875-7818999998652010133312356555403567776
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLY-QSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKT 108 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~-~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aikl 108 (392)
T Consensus 43 s~dV~IDlLTDSGT~AM--Sd--------~Qwaamm~gDEsYAGs~sf~~l~~av~di~G~~~~iPtHQGRaA-E~---I 108 (461)
T PRK13238 43 SEDVFIDLLTDSGTGAM--SD--------RQWAAMMRGDEAYAGSRSYYRLEDAVKDIFGYEYTIPTHQGRAA-EQ---I 108 (461)
T ss_pred CCCEEEEEEECCCCCCC--CH--------HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCCHHH-HH---H
T ss_conf 46635764215881304--59--------99999984223431355499999999987298644545663779-99---9
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC----CCCCCCCCCCCCCCCCCC---HHHHHHHHHC----CCC
Q ss_conf 654320013478600234354656543-2123455321----134799986433322210---0268875410----123
Q gi|254780432|r 109 ARRYHYMAGKTNKFRIVTFEGAFHGRT-LATISAGGKL----QYLEGFGPKIEGFDQAKF---CDLQSLKNQI----SND 176 (392)
Q Consensus 109 ar~~~~~~g~t~r~~ii~~~~~yHG~t-~~a~s~s~~~----~~~~~~~p~~~~~~~~~~---~d~~~l~~~~----~~~ 176 (392)
T Consensus 109 lf~~--l~-k~g~---~v-p~N~HFdTTrahie~~G~~~~dl~~~ea~d~~----~~~pFKGN~Dl~kLe~~i~~~g~~~ 177 (461)
T PRK13238 109 LFPV--LI-KKGD---VV-PSNYHFDTTRAHIELNGGTAVNLVIDEALDTG----SRYPFKGNFDLEKLEALIEEVGADN 177 (461)
T ss_pred HHHH--HC-CCCC---EE-CCCCCCCCCHHHHHHCCCEEEEEECHHHCCCC----CCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 9998--64-6997---85-78878565078888539867730544314957----6789788779999999998738446
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC--CCCCCC------CCCC---------CCC
Q ss_conf 32222333222211246210123221102234572131011003444455--531011------1245---------453
Q gi|254780432|r 177 TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG--KLFAYE------WANV---------KPD 239 (392)
Q Consensus 177 iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG--~~f~~e------~~gi---------~PD 239 (392)
T Consensus 178 I~~v~~tiTnN~~GGQPVSm~Nir~v~~la~~~~ip~~lDaa-----RfaENAyFIk~RE~gY~d~si~eI~rEmfs~aD 252 (461)
T PRK13238 178 IPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVLDAA-----RFAENAYFIKQREPGYKDKSIKEITREMFSYAD 252 (461)
T ss_pred CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHH-----HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 548999986268788164689999999999982995998656-----676645788732531257999999999984523
Q ss_pred EEECCCCCCCCC-CCCCCCCCCC---CCCCCCC----CCCCCCCCCCC-CCHHHHHHHHHHHHCCCCC-CHHHHHCCHHH
Q ss_conf 021034444443-4432100011---1222223----32234532111-1001233455432012221-01121000026
Q gi|254780432|r 240 IMTIAKGMGGGF-PIGACLATNE---VAACMNQ----GSHGSTYGGNV-LAMVLGEKVLNIIQSDGFL-ENVINIAKILF 309 (392)
Q Consensus 240 i~~~gK~l~gG~-P~sav~~~~~---i~~~~~~----~~~~~T~~gnp-l~~aaa~a~L~~l~~~~l~-~~~~~~g~~l~ 309 (392)
T Consensus 253 g~tmSaKK-D~~vniGG~l~~~d~~~l~~~~~~~~i~~EGf~TYGGlaGRDmeAlAvGL~E~~d~dyl~~Ri~qv-~yLg 330 (461)
T PRK13238 253 GLTMSAKK-DAMVNIGGLLCFKDDSDLYTKCRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIAQV-EYLG 330 (461)
T ss_pred EEEEEECC-CCEECCCCEEEECCHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHH-HHHH
T ss_conf 79998330-121044228996675999999874424205875668833877999973578760779999779999-9999
Q ss_pred HHHHHHHHHCCCEEEEECCCEEEEEEE-E-------CCCHHHH-HHHHHHCCEEE-------E---EC-C------CCEE
Q ss_conf 889999886797075504640099987-2-------4998999-99999689899-------6---26-8------9889
Q gi|254780432|r 310 EGLTAIKNRFPNMFLEVRGQGLLIGLK-T-------VFSPALL-AAKFRDECLLT-------A---PS-S------DNVV 363 (392)
Q Consensus 310 ~~L~~l~~~~~~~v~~vRG~Gl~~~ie-~-------~~~~~~~-~~~l~~~Gll~-------~---~~-~------~~~i 363 (392)
T Consensus 331 ~~L~~~---GVPvv~P~GGHAv~iDA~~fLPhip~~qfPa~aLa~eLY~~~GIR~vEiGs~~~grdp~tg~~~~~~~ELv 407 (461)
T PRK13238 331 EGLEEA---GVPVVTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRAVEIGSLLLGRDPDTGEQLPAPAELL 407 (461)
T ss_pred HHHHHC---CCCEECCCCCEEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCCCCCCCCCE
T ss_conf 999977---99705679851899746785679981448189999999997295578750012054888766578760000
Q ss_pred EECCC-CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 95589-868899999999999999998
Q gi|254780432|r 364 RILPP-LTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 364 rl~Pp-l~it~~eid~~i~~l~~al~~ 389 (392)
T Consensus 408 RLAiPRRvYT~sH~dyva~~l~~l~~~ 434 (461)
T PRK13238 408 RLAIPRRVYTQSHMDYVAEALKWVKEN 434 (461)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 242450003588999999999999956