HHsearch alignment for GI: 254780432 and conserved domain: TIGR01140

>TIGR01140 CobD L-threonine-O-3-phosphate decarboxylase, putative; InterPro: IPR005860 L-threonine-O-3-phosphate decarboxylase (CobD) was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, which is the precursor for the linkage between the nucleotide loop and the corrin ring in the biosynthesis of cobalamin . The molecule is a dimer where each subunit consists of a large and small domain . This family contains pyridoxal phosphate-binding class II aminotransferases closely related to histidinol-phosphate aminotransferase (HisC). ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=97.82  E-value=0.00033  Score=47.93  Aligned_cols=314  Identities=20%  Similarity=0.263  Sum_probs=186.9

Q ss_pred             CCCEEEECHHHHHHHCCCCCCHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH--CCCCCCCCCCCCCCCHHHHH
Q ss_conf             99764641022674357878999-9999999997314506875781899999865201--01333123565554035677
Q gi|254780432|r   30 NGIPFLDFASGIAVNSLGHSHPE-LVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHS--TFADRVFFTNSGAESVECAI  106 (392)
Q Consensus        30 dG~~yiD~~~g~~~~~lGh~~p~-i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~--~~~~~v~f~~SGseA~e~Ai  106 (392)
T Consensus         3 ~~~~lLDFsAn--inPlgp--P~S~~aa~~~aLd~~~rYPD----~dY~hlrqA~AdH~q~~~dwvl~gnG~~e~i~la~   74 (349)
T TIGR01140         3 DDDDLLDFSAN--INPLGP--PASVKAALAAALDALERYPD----DDYIHLRQALADHHQVAADWVLAGNGELESIRLAA   74 (349)
T ss_pred             CCCCCCCCCCC--CCCCCC--CCCHHHHHHHHHHHHHCCCC----CCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHH
T ss_conf             87430324345--788887--60204589874278760888----43189999986541256012545997278889988


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf             76654320013478600234354656--54321234553---21134799986433322210026887541012332222
Q gi|254780432|r  107 KTARRYHYMAGKTNKFRIVTFEGAFH--GRTLATISAGG---KLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL  181 (392)
Q Consensus       107 klar~~~~~~g~t~r~~ii~~~~~yH--G~t~~a~s~s~---~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi  181 (392)
T Consensus        75 ~t~~-------~~Gd~~-~V~~P~F~eYgR~~~~~Gae~~ti~w~~~~~~~W~~---~~d-PseiA~l~A~~s~h~~lil  142 (349)
T TIGR01140        75 ETLV-------SRGDAV-LVVAPAFAEYGRELELAGAELKTIRWSLDEADGWRV---LRD-PSEIALLDAVTSEHDLLIL  142 (349)
T ss_pred             HHCC-------CCCCEE-EEECCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCC---CCC-HHHHHHHCCCCCCCCEEEE
T ss_conf             6147-------888757-870887026799998569812234577316888745---576-4566541268833135311


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE-----EECCCCCCC-----CC
Q ss_conf             33322221124621012322110223457213101100344445553101112454530-----210344444-----43
Q gi|254780432|r  182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDI-----MTIAKGMGG-----GF  251 (392)
Q Consensus       182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi-----~~~gK~l~g-----G~  251 (392)
T Consensus       143 ctPnNPt-G~-l~~r~~l~A~a~rc~~~N~~LllDEAF~dF~pPG~-----E~~l~p~l~~~P~~~vlRSLTKfy~lPGL  215 (349)
T TIGR01140       143 CTPNNPT-GD-LLERDALRALADRCKAVNIELLLDEAFLDFLPPGE-----ETSLVPSLKDTPNVVVLRSLTKFYALPGL  215 (349)
T ss_pred             ECCCCCC-CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCCHHHCCCCEEEECCHHHHHCCHHH
T ss_conf             1767698-98-62247899999888874046666556515789864-----43434133268978997111554025024


Q ss_pred             CCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC----CHHHHHCCHHHHHHHHH--HHHCCCEEE
Q ss_conf             4432100011-1222223322345321111001233455432012221----01121000026889999--886797075
Q gi|254780432|r  252 PIGACLATNE-VAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFL----ENVINIAKILFEGLTAI--KNRFPNMFL  324 (392)
Q Consensus       252 P~sav~~~~~-i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~----~~~~~~g~~l~~~L~~l--~~~~~~~v~  324 (392)
T Consensus       216 RlGylva~~Da~la~~r~~r--~pW~vnalAaaag~~al~---~sef~q~tw~wl~~erar~~qaL~~lP~l~v~Ps---  287 (349)
T TIGR01140       216 RLGYLVAVDDALLARLRAAR--RPWSVNALAAAAGAAALR---DSEFRQETWRWLAEERARLRQALADLPLLDVYPS---  287 (349)
T ss_pred             HHHHHHCCCHHHHHHHHHHC--CCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---
T ss_conf             45455516617899999742--899877689999999876---6789999987436677899999971788755888---


Q ss_pred             EECCCEEEEEEEECCCHHHHHH-HHHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf             5046400999872499899999-999689899626------898899558986889999999999999
Q gi|254780432|r  325 EVRGQGLLIGLKTVFSPALLAA-KFRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIER  385 (392)
Q Consensus       325 ~vRG~Gl~~~ie~~~~~~~~~~-~l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~  385 (392)
T Consensus       288 ----~anfLLl~~~~~~~dl~~~llt~~~IliRdc~~fpgLds~~~RVA---vRt~a~N~rLlaALa~  348 (349)
T TIGR01140       288 ----RANFLLLKVEREDVDLQEELLTKERILIRDCLSFPGLDSDYYRVA---VRTAAENDRLLAALAD  348 (349)
T ss_pred             ----CCCCEEEECCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEE---ECCHHHHHHHHHHHHC
T ss_conf             ----876114545898688999998743410012057888887527888---5285547899999613