HHsearch alignment for GI: 254780432 and conserved domain: TIGR01885
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=100.00 E-value=0 Score=862.14 Aligned_cols=386 Identities=35% Similarity=0.643 Sum_probs=371.7
Q ss_pred CCCCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 84314515588887489850103799679976464102267435787899999999999973145068757818999998
Q gi|254780432|r 2 NKNDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFAN 81 (392)
Q Consensus 2 ~~~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~ 81 (392)
T Consensus 12 ~~~~YgAhnYhPLPV~~~~g~G~~v~D~eG~~Y~D~LSaYSavNqGHchP~i~~Al~~Q~~KlTL~Sraf~nd~lg~~~~ 91 (426)
T TIGR01885 12 RESKYGAHNYHPLPVVLQRGKGAYVWDPEGREYLDFLSAYSAVNQGHCHPKIVNALKNQADKLTLTSRAFHNDVLGEFAK 91 (426)
T ss_pred HCCCCCCCCCCCHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHH
T ss_conf 10234677888247887506830898148888641002554401376771689999999851371027660603578999
Q ss_pred HHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 6520101--3331235655540356777665432001347--86002343546565432123455321-13479998643
Q gi|254780432|r 82 HLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKT--NKFRIVTFEGAFHGRTLATISAGGKL-QYLEGFGPKIE 156 (392)
Q Consensus 82 ~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t--~r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~p~~~ 156 (392)
T Consensus 92 ~~t~LfgGk~~~vL~mNTGaEAvEtA~KLAR~WgY~~K~ip~~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflP 171 (426)
T TIGR01885 92 YLTKLFGGKYEKVLPMNTGAEAVETALKLARKWGYEVKGIPRNKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLP 171 (426)
T ss_pred HHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCC
T ss_conf 99975499510560456873479999999997441357855762389985388733035443202672120067879677
Q ss_pred ------CCCCCCCHHHHHHHHHC------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf ------33222100268875410------123322223332222112462101232211022345721310110034444
Q gi|254780432|r 157 ------GFDQAKFCDLQSLKNQI------SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 157 ------~~~~~~~~d~~~l~~~~------~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
T Consensus 172 nvasGhgf~~iPYgd~EAl~~aL~~P~~~GDnVAA~i~EPIQGEAGvvvPp~gYl~~V~~LC~~~nVLfI~DEiQTGlGR 251 (426)
T TIGR01885 172 NVASGHGFRKIPYGDLEALRKALQDPKKTGDNVAAFILEPIQGEAGVVVPPPGYLPGVRALCKEHNVLFIADEIQTGLGR 251 (426)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCH
T ss_conf 43357852115588878999997275778886899995040354436848963578999986551872898200038402
Q ss_pred CCCCCCCCCCC--CCCCEEECCCCCCCC-CCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 55531011124--545302103444444-3443210001112222233--223453211110012334554320122210
Q gi|254780432|r 225 TGKLFAYEWAN--VKPDIMTIAKGMGGG-FPIGACLATNEVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQSDGFLE 299 (392)
Q Consensus 225 tG~~f~~e~~g--i~PDi~~~gK~l~gG-~P~sav~~~~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~ 299 (392)
T Consensus 252 TGk~la~dh~~aev~PDi~lLGKALsGGv~PiSa~la~~dim~vl~PGPF~HGSTfGGNPLAcavaiAaLeVL~~ekL~~ 331 (426)
T TIGR01885 252 TGKLLACDHENAEVKPDIVLLGKALSGGVYPISAVLADDDIMSVLKPGPFEHGSTFGGNPLACAVAIAALEVLEEEKLAE 331 (426)
T ss_pred HHHHHHHHCCCCEECCCCEEEEHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 54533101058820450335112345894622436664640121176486567768875789999999999874045068
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC------HHHHHHHHHHCCEEEEEC-CCCEEEECCCCCCC
Q ss_conf 11210000268899998867970755046400999872499------899999999689899626-89889955898688
Q gi|254780432|r 300 NVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS------PALLAAKFRDECLLTAPS-SDNVVRILPPLTIT 372 (392)
Q Consensus 300 ~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~------~~~~~~~l~~~Gll~~~~-~~~~irl~Ppl~it 372 (392)
T Consensus 332 ~A~~lG~~f~~~L~~l~~~S~dvv~EVRGkGLL~AIe~~~~ka~~~~~w~~Cl~~k~~GLlak~~nhd~~IR~aPPL~i~ 411 (426)
T TIGR01885 332 RADQLGDMFLDELKQLARESPDVVKEVRGKGLLIAIEFKENKADEIGAWDVCLRLKENGLLAKPTNHDKIIRLAPPLVIT 411 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEECCCCCCCEEEECCCCCCC
T ss_conf 89883289999999887507640001156721688885065333264668878852074210133587068717885263
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780432|r 373 AEEIHEGLERIERTA 387 (392)
Q Consensus 373 ~~eid~~i~~l~~al 387 (392)
T Consensus 412 ~E~L~~~ie~i~K~~ 426 (426)
T TIGR01885 412 KEQLDEVIEIIRKTL 426 (426)
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 899999999986049