HHsearch alignment for GI: 254780432 and conserved domain: TIGR01976

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein; InterPro: IPR011340 This entry describes probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. The most closely related characterised proteins are active as cysteine desulphurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown..
Probab=95.88  E-value=0.17  Score=30.21  Aligned_cols=314  Identities=19%  Similarity=0.188  Sum_probs=161.8

Q ss_pred             EEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCC-CCCCCCCH-HH-HH---HHH----HHHHHCCCCCCCCCCCCCCCH
Q ss_conf             6464102267435787899999999999973145-06875781-89-99---998----652010133312356555403
Q gi|254780432|r   33 PFLDFASGIAVNSLGHSHPELVAILKSQSEKLWH-VSNLYQST-QQ-EI---FAN----HLIHSTFADRVFFTNSGAESV  102 (392)
Q Consensus        33 ~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~-~~~~~~~~-~~-~~---la~----~L~~~~~~~~v~f~~SGseA~  102 (392)
T Consensus        23 ~~~DnpAG------~q~Pq~V~dAv~~~L~~~~A~~gg~~~~~G~~~~~~vd~AR~a~A~LlnA~~Pe~vv~---G~~~T   93 (410)
T TIGR01976        23 VFFDNPAG------TQIPQSVLDAVSAALTRSNANRGGAYESSGRKADQVVDDAREAVADLLNAESPEEVVF---GANAT   93 (410)
T ss_pred             EEEECCCC------CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE---CCCHH
T ss_conf             89757888------8777347999999987413013767766306899999999999999726798885676---78668


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCC--CCCCCCCCCCH-HHHHHHHHCCCC
Q ss_conf             567776654320013478600234354656543212345532113479---998--64333222100-268875410123
Q gi|254780432|r  103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEG---FGP--KIEGFDQAKFC-DLQSLKNQISND  176 (392)
Q Consensus       103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~---~~p--~~~~~~~~~~~-d~~~l~~~~~~~  176 (392)
T Consensus        94 ~L~~~ls~a~~~~~~-~GDEvivt~LDHe----------aNispW~~~a~~~Ga~Vkw~~~d~~~~~L~~~~L~~Lls~r  162 (410)
T TIGR01976        94 SLAYLLSRALSRRWG-PGDEVIVTRLDHE----------ANISPWLQAAEDAGAKVKWARVDEADGELHPDDLASLLSPR  162 (410)
T ss_pred             HHHHHHHHHHHHHCC-CCCEEEEECCCCC----------CCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCC
T ss_conf             999999999851268-9855897167660----------01368999998389789996336231544869982366882


Q ss_pred             ---CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC---CCEEECCCCCCCC
Q ss_conf             ---3222233322221124621012322110223457213101100344445553101112454---5302103444444
Q gi|254780432|r  177 ---TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVK---PDIMTIAKGMGGG  250 (392)
Q Consensus       177 ---iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~---PDi~~~gK~l~gG  250 (392)
T Consensus       163 TRLVAvt~ASn~~---Gs~~d----l~A~~~~vh~aGA~v~VDaVhya--------PH~L~Dvqa~gaD~l~cSaYK~fG  227 (410)
T TIGR01976       163 TRLVAVTAASNLL---GSIVD----LAALTELVHAAGALVYVDAVHYA--------PHGLIDVQALGADFLVCSAYKFFG  227 (410)
T ss_pred             HHHHHHHHHHCCC---CCHHH----HHHHHHHHHHCCCEEEECHHHHC--------CCCCCCHHHHCCCEEEECCEECCC
T ss_conf             2555623440232---55115----88999999875987988111004--------566641342278879985631168


Q ss_pred             CCCCCCCCCCCCCCCCCCCC-------------CCCCCCCCCCCHHHHHHHHHHHH----C-------CCCC---CHHHH
Q ss_conf             34432100011122222332-------------23453211110012334554320----1-------2221---01121
Q gi|254780432|r  251 FPIGACLATNEVAACMNQGS-------------HGSTYGGNVLAMVLGEKVLNIIQ----S-------DGFL---ENVIN  303 (392)
Q Consensus       251 ~P~sav~~~~~i~~~~~~~~-------------~~~T~~gnpl~~aaa~a~L~~l~----~-------~~l~---~~~~~  303 (392)
T Consensus       228 PH~G~l~~R~~~~~~l~~~k~~~~~d~~P~r~E~GT~~yEllAG~~AavdYLa~lg~nlA~~~~gsrR~~lv~sf~~~~a  307 (410)
T TIGR01976       228 PHLGILWGRPELLKSLPPYKLEFSEDTGPERFELGTLQYELLAGVVAAVDYLAGLGRNLAASANGSRRERLVASFEAIEA  307 (410)
T ss_pred             CCEEEEEECHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf             85017871146640468763367788888514514556026789999999999823210689886558999999999999


Q ss_pred             HCCHHHHHHHHHHHHCCCEEEEECCCE----E-----EEEEEEC-CCHHHHHHHHHHCCEEEEEC---------------
Q ss_conf             000026889999886797075504640----0-----9998724-99899999999689899626---------------
Q gi|254780432|r  304 IAKILFEGLTAIKNRFPNMFLEVRGQG----L-----LIGLKTV-FSPALLAAKFRDECLLTAPS---------------  358 (392)
Q Consensus       304 ~g~~l~~~L~~l~~~~~~~v~~vRG~G----l-----~~~ie~~-~~~~~~~~~l~~~Gll~~~~---------------  358 (392)
T Consensus       308 yE~~l~~~Ll~~L~~~P~-~-t~yG~~d~~R~~~RvPTv~F~v~~~~P~~~~~~La~~~v~~~~GHfYA~~~~~~LGl~~  385 (410)
T TIGR01976       308 YENRLAERLLAGLSDLPG-V-TVYGVQDEKRLAERVPTVAFTVAGLSPQRVVRRLADQGVDVWAGHFYAVRLLRRLGLEA  385 (410)
T ss_pred             HHHHHHHHHHHHHHHCCC-E-EEECHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCC
T ss_conf             999999999999874895-6-99735578646425975889727878799999985368633126411689998658989


Q ss_pred             CCCEEEECCCCCCCHHHHHHHHHHH
Q ss_conf             8988995589868899999999999
Q gi|254780432|r  359 SDNVVRILPPLTITAEEIHEGLERI  383 (392)
Q Consensus       359 ~~~~irl~Ppl~it~~eid~~i~~l  383 (392)
T Consensus       386 ~~GvvR~gLaHY~t~eevd~l~~aL  410 (410)
T TIGR01976       386 DGGVVRVGLAHYNTAEEVDRLLEAL  410 (410)
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHCC
T ss_conf             8873898525779889999998509