Query gi|254780432|ref|YP_003064845.1| acetylornithine transaminase protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 392
No_of_seqs 157 out of 10448
Neff 7.4
Searched_HMMs 39220
Date Sun May 29 21:44:48 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780432.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00707 argD acetylornithine 100.0 0 0 920.9 22.5 382 6-388 1-402 (402)
2 TIGR01885 Orn_aminotrans ornit 100.0 0 0 862.1 19.8 386 2-387 12-426 (426)
3 COG4992 ArgD Ornithine/acetylo 100.0 0 0 843.0 24.9 385 3-391 13-400 (404)
4 PRK02627 acetylornithine amino 100.0 0 0 829.2 27.6 387 3-390 10-397 (398)
5 PRK12381 bifunctional succinyl 100.0 0 0 807.6 28.8 387 4-391 11-401 (406)
6 PRK05093 argD bifunctional N-s 100.0 0 0 808.4 27.3 387 4-391 12-402 (403)
7 PRK01278 argD bifunctional N-s 100.0 0 0 808.0 27.4 384 7-390 6-389 (389)
8 TIGR03246 arg_catab_astC succi 100.0 0 0 798.1 27.7 386 4-390 7-396 (397)
9 PTZ00125 ornithine aminotransf 100.0 0 0 789.3 27.0 387 3-391 20-415 (415)
10 PRK04073 rocD ornithine--oxo-a 100.0 0 0 789.5 25.8 383 3-388 11-396 (396)
11 PRK04612 argD bifunctional N-s 100.0 0 0 786.0 27.8 386 4-390 12-404 (408)
12 PRK02936 argD acetylornithine 100.0 0 0 788.6 25.5 376 5-387 2-377 (377)
13 PRK00854 rocD ornithine--oxo-a 100.0 0 0 778.6 24.8 384 2-388 14-403 (404)
14 PRK03244 argD acetylornithine 100.0 0 0 775.9 25.4 378 4-391 15-396 (398)
15 PRK07030 adenosylmethionine--8 100.0 0 0 776.0 25.3 386 3-391 11-448 (467)
16 PRK03715 argD bifunctional N-s 100.0 0 0 771.4 28.2 384 4-391 8-395 (395)
17 COG0160 GabT 4-aminobutyrate a 100.0 0 0 772.6 25.0 380 4-391 26-447 (447)
18 PRK05965 hypothetical protein; 100.0 0 0 767.4 26.8 387 3-391 10-449 (459)
19 PRK08593 4-aminobutyrate amino 100.0 0 0 766.1 26.2 384 2-392 13-435 (448)
20 PRK04260 acetylornithine amino 100.0 0 0 767.6 24.3 374 5-387 2-375 (375)
21 PRK07678 aminotransferase; Val 100.0 0 0 764.4 26.7 388 3-391 14-451 (451)
22 PRK07482 hypothetical protein; 100.0 0 0 763.5 26.8 388 3-391 12-456 (461)
23 PRK06541 hypothetical protein; 100.0 0 0 765.3 24.9 387 3-391 16-457 (460)
24 PRK06148 hypothetical protein; 100.0 0 0 764.2 25.2 376 5-390 596-1013(1015)
25 PRK11522 putrescine--2-oxoglut 100.0 0 0 762.0 26.9 373 16-391 75-462 (468)
26 PRK08742 adenosylmethionine--8 100.0 0 0 764.1 25.1 385 3-390 27-468 (472)
27 PRK07481 hypothetical protein; 100.0 0 0 761.9 26.6 387 3-391 6-446 (448)
28 PRK06105 aminotransferase; Pro 100.0 0 0 760.9 26.7 386 3-391 12-451 (460)
29 cd00610 OAT_like Acetyl ornith 100.0 0 0 760.9 26.4 378 3-387 5-413 (413)
30 PRK07495 4-aminobutyrate amino 100.0 0 0 760.9 26.2 380 5-391 10-421 (422)
31 PRK13360 omega amino acid--pyr 100.0 0 0 760.2 26.4 386 3-391 10-441 (441)
32 PRK09221 beta alanine--pyruvat 100.0 0 0 758.9 26.6 387 2-391 13-445 (445)
33 PRK06916 adenosylmethionine--8 100.0 0 0 759.6 26.0 387 3-392 22-460 (462)
34 PRK06943 adenosylmethionine--8 100.0 0 0 757.8 27.2 385 3-390 17-446 (452)
35 PRK07323 consensus 100.0 0 0 757.2 26.6 379 3-390 28-443 (443)
36 PRK07480 putative aminotransfe 100.0 0 0 757.0 26.4 386 3-391 17-453 (459)
37 PRK08360 4-aminobutyrate amino 100.0 0 0 756.9 26.2 381 4-391 11-428 (443)
38 PRK05769 4-aminobutyrate amino 100.0 0 0 754.3 26.7 379 3-390 25-441 (442)
39 PRK05964 adenosylmethionine--8 100.0 0 0 752.2 27.4 384 3-390 8-421 (421)
40 PRK08117 4-aminobutyrate amino 100.0 0 0 752.2 26.9 382 3-391 11-429 (429)
41 PRK07036 hypothetical protein; 100.0 0 0 753.2 26.1 387 3-392 15-455 (466)
42 PRK06058 4-aminobutyrate amino 100.0 0 0 751.7 26.6 379 5-390 28-446 (446)
43 PRK06917 hypothetical protein; 100.0 0 0 748.3 26.9 387 4-391 2-439 (447)
44 PRK06918 4-aminobutyrate amino 100.0 0 0 747.8 26.8 379 5-390 27-445 (454)
45 COG0161 BioA Adenosylmethionin 100.0 0 0 750.5 24.2 386 3-390 9-444 (449)
46 PRK08088 4-aminobutyrate amino 100.0 0 0 748.2 25.9 382 3-391 12-426 (426)
47 PRK06777 4-aminobutyrate amino 100.0 0 0 747.2 26.6 374 8-388 15-420 (421)
48 PRK07894 consensus 100.0 0 0 748.1 25.9 385 3-390 13-429 (430)
49 PRK07483 hypothetical protein; 100.0 0 0 745.7 26.5 385 5-390 2-438 (443)
50 PRK06082 4-aminobutyrate amino 100.0 0 0 747.2 25.3 380 3-391 42-454 (460)
51 PRK05639 4-aminobutyrate amino 100.0 0 0 745.5 25.8 380 4-391 23-445 (457)
52 PRK06173 adenosylmethionine--8 100.0 0 0 744.1 26.3 387 3-392 10-428 (429)
53 PRK06931 diaminobutyrate--2-ox 100.0 0 0 742.0 26.9 380 3-390 23-450 (454)
54 PRK06149 hypothetical protein; 100.0 0 0 745.2 24.3 369 11-389 564-970 (972)
55 PRK09044 consensus 100.0 0 0 743.0 25.8 385 2-389 7-417 (418)
56 PRK09264 diaminobutyrate--2-ox 100.0 0 0 740.2 27.5 380 5-391 11-418 (426)
57 PRK08555 consensus 100.0 0 0 740.3 27.1 378 4-390 21-443 (443)
58 PRK06062 hypothetical protein; 100.0 0 0 739.9 26.3 380 3-391 3-430 (434)
59 PRK08466 consensus 100.0 0 0 738.1 27.1 385 3-391 10-430 (430)
60 PRK06938 diaminobutyrate--2-ox 100.0 0 0 741.1 24.8 377 6-390 36-461 (464)
61 PRK05630 adenosylmethionine--8 100.0 0 0 739.6 25.8 383 3-388 10-421 (423)
62 PRK09792 PLP-dependent GABA am 100.0 0 0 738.4 26.3 376 7-389 14-421 (421)
63 PRK12403 putative aminotransfe 100.0 0 0 737.6 26.1 385 4-391 19-454 (460)
64 PRK07986 adenosylmethionine--8 100.0 0 0 736.2 26.1 386 3-392 9-426 (428)
65 PRK04013 argD acetylornithine/ 100.0 0 0 731.3 27.1 362 10-392 2-363 (364)
66 TIGR03372 putres_am_tran putre 100.0 0 0 732.7 24.2 370 15-387 58-442 (442)
67 TIGR02407 ectoine_ectB diamino 100.0 0 0 735.8 20.0 380 3-389 5-413 (413)
68 PRK08297 L-lysine aminotransfe 100.0 0 0 724.1 23.0 388 4-391 25-449 (449)
69 KOG1402 consensus 100.0 0 0 713.7 18.6 386 3-388 30-426 (427)
70 TIGR00700 GABAtrnsam 4-aminobu 100.0 0 0 709.3 18.9 368 14-388 15-426 (427)
71 TIGR03251 LAT_fam L-lysine 6-t 100.0 0 0 705.0 22.2 383 4-386 9-431 (431)
72 PRK00062 glutamate-1-semialdeh 100.0 0 0 681.4 24.2 372 8-391 28-428 (429)
73 KOG1404 consensus 100.0 0 0 673.2 19.7 368 9-383 27-432 (442)
74 PRK12389 glutamate-1-semialdeh 100.0 0 0 660.6 24.0 367 13-391 34-429 (429)
75 PRK06942 glutamate-1-semialdeh 100.0 0 0 656.3 23.4 371 8-390 26-425 (425)
76 PRK00615 glutamate-1-semialdeh 100.0 0 0 652.5 23.1 371 9-391 30-430 (433)
77 pfam00202 Aminotran_3 Aminotra 100.0 0 0 654.5 18.5 321 17-339 1-338 (338)
78 PRK07046 aminotransferase; Val 100.0 0 0 623.9 23.7 367 11-391 53-451 (452)
79 KOG1401 consensus 100.0 0 0 619.1 20.2 387 5-391 29-432 (433)
80 PRK06209 glutamate-1-semialdeh 100.0 0 0 606.4 23.3 351 14-391 30-407 (431)
81 TIGR00713 hemL glutamate-1-sem 100.0 0 0 607.3 20.2 371 8-390 24-434 (434)
82 TIGR00709 dat 2,4-diaminobutyr 100.0 0 0 598.2 20.3 376 7-391 13-440 (445)
83 COG0001 HemL Glutamate-1-semia 100.0 0 0 543.5 22.6 366 14-391 35-430 (432)
84 KOG1403 consensus 100.0 0 0 500.9 16.8 369 11-390 26-438 (452)
85 TIGR00699 GABAtrns_euk 4-amino 100.0 0 0 496.2 16.2 368 13-387 40-469 (469)
86 KOG1405 consensus 100.0 0 0 439.0 17.3 371 13-390 57-484 (484)
87 TIGR00508 bioA adenosylmethion 100.0 0 0 333.2 17.3 386 3-389 11-465 (466)
88 PRK06939 2-amino-3-ketobutyrat 100.0 6E-30 1.5E-34 216.3 14.5 342 10-390 20-394 (395)
89 PRK05958 8-amino-7-oxononanoat 100.0 2.4E-29 6.2E-34 212.3 15.7 340 12-389 20-386 (387)
90 TIGR00858 bioF 8-amino-7-oxono 100.0 3.2E-29 8.3E-34 211.5 11.5 337 13-384 3-378 (378)
91 cd06454 KBL_like KBL_like; thi 100.0 7.2E-28 1.8E-32 202.7 15.5 317 32-386 1-348 (349)
92 PRK13392 5-aminolevulinate syn 100.0 1.3E-27 3.2E-32 201.1 16.1 344 11-391 20-399 (410)
93 PRK07505 hypothetical protein; 100.0 2.1E-26 5.3E-31 193.1 18.1 342 16-391 33-404 (405)
94 PRK13393 5-aminolevulinate syn 100.0 1.9E-26 4.9E-31 193.4 17.5 342 11-390 19-397 (404)
95 PRK09064 5-aminolevulinate syn 99.9 1.9E-26 4.9E-31 193.4 16.3 337 17-391 25-398 (406)
96 PRK07179 hypothetical protein; 99.9 7.5E-27 1.9E-31 196.0 13.1 323 29-391 51-401 (408)
97 TIGR01821 5aminolev_synth 5-am 99.9 3.7E-26 9.5E-31 191.5 12.5 334 18-391 26-423 (427)
98 COG0156 BioF 7-keto-8-aminopel 99.9 5.2E-25 1.3E-29 184.0 14.6 330 17-386 25-387 (388)
99 TIGR01825 gly_Cac_T_rel pyrido 99.9 9.9E-24 2.5E-28 175.6 15.6 333 13-391 15-390 (392)
100 PRK05937 8-amino-7-oxononanoat 99.9 2.9E-23 7.5E-28 172.5 15.3 318 30-391 2-352 (370)
101 TIGR01822 2am3keto_CoA 2-amino 99.9 3E-23 7.6E-28 172.5 14.4 332 13-390 19-392 (395)
102 PRK06225 aspartate aminotransf 99.8 2.6E-17 6.6E-22 133.6 16.6 329 33-391 23-373 (375)
103 PRK07212 consensus 99.8 6.9E-17 1.8E-21 130.9 17.2 330 29-387 28-377 (378)
104 PRK05764 aspartate aminotransf 99.8 1.8E-16 4.5E-21 128.2 17.8 334 29-391 28-389 (389)
105 PRK07367 consensus 99.8 2.7E-16 6.9E-21 127.0 18.0 335 29-390 25-385 (385)
106 cd06453 SufS_like Cysteine des 99.7 1.5E-16 3.9E-21 128.6 15.0 322 34-383 2-373 (373)
107 PRK07324 transaminase; Validat 99.7 1.6E-16 4.2E-21 128.4 15.1 306 64-392 56-373 (373)
108 PRK05957 aspartate aminotransf 99.7 4.6E-16 1.2E-20 125.5 17.4 336 29-391 24-387 (389)
109 PRK08361 aspartate aminotransf 99.7 2.7E-16 6.8E-21 127.0 15.7 334 31-390 31-390 (390)
110 TIGR03392 FeS_syn_CsdA cystein 99.7 5.5E-15 1.4E-19 118.4 21.3 333 29-391 14-397 (398)
111 PRK06056 consensus 99.7 1.3E-15 3.2E-20 122.6 18.0 333 29-390 31-401 (402)
112 PRK10874 cysteine sulfinate de 99.7 5.1E-15 1.3E-19 118.7 21.1 333 29-391 17-400 (401)
113 PRK05794 consensus 99.7 9.2E-16 2.3E-20 123.5 17.1 332 29-390 27-396 (397)
114 KOG1359 consensus 99.7 3.4E-16 8.7E-21 126.3 14.8 331 15-390 49-413 (417)
115 PRK07778 consensus 99.7 9E-16 2.3E-20 123.6 16.9 334 29-388 27-385 (386)
116 PRK05942 aspartate aminotransf 99.7 8E-16 2E-20 123.9 16.6 334 29-389 32-392 (394)
117 PRK07683 aminotransferase A; V 99.7 1.9E-15 4.9E-20 121.4 18.2 334 30-390 26-384 (387)
118 pfam00155 Aminotran_1_2 Aminot 99.7 5.1E-16 1.3E-20 125.2 15.1 323 32-383 1-351 (351)
119 PRK08443 consensus 99.7 2.1E-15 5.3E-20 121.2 18.0 337 29-390 26-387 (388)
120 PRK06348 aspartate aminotransf 99.7 1.7E-15 4.2E-20 121.8 17.3 329 32-386 29-382 (383)
121 PRK06375 consensus 99.7 1.7E-15 4.3E-20 121.8 17.3 334 29-390 26-381 (381)
122 PRK08362 consensus 99.7 1.7E-15 4.3E-20 121.8 16.8 335 30-390 24-386 (389)
123 PRK03566 consensus 99.7 2E-15 5E-20 121.4 16.1 321 32-389 32-364 (365)
124 PRK08069 consensus 99.7 3.1E-15 7.9E-20 120.1 16.7 333 29-388 27-390 (390)
125 PRK06107 aspartate aminotransf 99.7 8.9E-15 2.3E-19 117.1 18.5 333 29-390 30-401 (402)
126 PRK02731 histidinol-phosphate 99.7 3.5E-15 8.9E-20 119.7 16.4 321 32-389 32-366 (367)
127 PRK07337 aminotransferase; Val 99.7 4.5E-15 1.1E-19 119.0 16.9 328 29-387 27-387 (388)
128 PRK07550 hypothetical protein; 99.7 5.8E-15 1.5E-19 118.3 16.8 327 29-385 27-384 (387)
129 PRK06108 aspartate aminotransf 99.7 6E-15 1.5E-19 118.2 16.8 335 30-389 22-382 (382)
130 KOG1360 consensus 99.7 1.4E-15 3.6E-20 122.3 13.5 310 45-391 181-526 (570)
131 PRK07682 hypothetical protein; 99.7 4.3E-15 1.1E-19 119.1 15.9 335 30-391 18-378 (378)
132 PRK03321 putative aminotransfe 99.7 5.6E-15 1.4E-19 118.4 16.3 318 33-389 23-351 (352)
133 TIGR03537 DapC succinyldiamino 99.7 1.2E-14 3E-19 116.3 17.8 329 33-385 1-349 (350)
134 PRK09276 aspartate aminotransf 99.7 3.3E-15 8.4E-20 119.9 14.9 329 29-386 28-385 (385)
135 PRK07568 aspartate aminotransf 99.7 1E-14 2.6E-19 116.7 17.3 338 29-391 27-394 (396)
136 PRK06575 consensus 99.7 1.6E-14 4E-19 115.5 18.2 333 29-390 28-399 (399)
137 PRK07681 aspartate aminotransf 99.7 5.7E-15 1.5E-19 118.3 15.9 329 29-386 29-385 (399)
138 PRK07543 consensus 99.7 5.2E-15 1.3E-19 118.6 15.6 333 29-390 28-399 (400)
139 PRK07366 succinyldiaminopimela 99.7 7.2E-15 1.8E-19 117.7 16.1 332 29-387 27-388 (388)
140 PRK09148 aminotransferase; Val 99.7 6.3E-15 1.6E-19 118.1 15.7 332 29-390 28-392 (406)
141 PRK06290 aspartate aminotransf 99.7 7.8E-15 2E-19 117.4 16.1 332 29-391 41-404 (411)
142 PRK05166 histidinol-phosphate 99.7 1.4E-14 3.6E-19 115.8 17.0 323 30-388 36-372 (374)
143 PRK08912 hypothetical protein; 99.7 1.1E-14 2.8E-19 116.5 16.1 331 29-389 23-386 (387)
144 PRK03158 histidinol-phosphate 99.7 1.7E-14 4.2E-19 115.3 16.9 319 32-387 29-359 (359)
145 PRK09295 selenocysteine lyase; 99.7 8E-14 2E-18 110.9 20.3 331 30-390 20-405 (406)
146 PRK08960 hypothetical protein; 99.7 2.6E-14 6.6E-19 114.0 17.7 331 29-388 29-386 (387)
147 PRK07310 consensus 99.7 2.9E-14 7.5E-19 113.7 17.7 334 29-389 27-392 (395)
148 TIGR03540 DapC_direct LL-diami 99.7 1.7E-14 4.4E-19 115.2 16.6 329 29-386 26-383 (383)
149 PRK08068 transaminase; Reviewe 99.7 1.6E-14 4E-19 115.5 16.0 328 29-386 29-386 (389)
150 PRK00950 histidinol-phosphate 99.6 2.6E-14 6.6E-19 114.0 16.9 324 27-388 30-369 (369)
151 PRK06207 aspartate aminotransf 99.6 4.7E-14 1.2E-18 112.3 18.1 341 30-390 33-404 (406)
152 PRK07777 aminotransferase; Val 99.6 2E-14 5E-19 114.8 16.1 332 29-388 21-385 (386)
153 PRK08175 aminotransferase; Val 99.6 3.3E-14 8.4E-19 113.4 17.1 334 29-389 26-389 (395)
154 PRK06220 consensus 99.6 2.9E-14 7.3E-19 113.8 16.8 332 29-390 28-381 (384)
155 TIGR03538 DapC_gpp succinyldia 99.6 4.1E-14 1.1E-18 112.7 17.4 337 26-387 23-394 (394)
156 PRK08636 aspartate aminotransf 99.6 4.2E-14 1.1E-18 112.6 17.1 339 29-391 30-402 (403)
157 pfam00266 Aminotran_5 Aminotra 99.6 5.1E-14 1.3E-18 112.1 17.5 315 34-379 2-371 (371)
158 PRK06507 consensus 99.6 3.5E-14 8.8E-19 113.2 16.3 333 29-390 28-399 (400)
159 PRK09147 aminotransferase; Pro 99.6 6.9E-14 1.7E-18 111.3 17.7 339 25-388 22-396 (397)
160 PRK09440 avtA valine--pyruvate 99.6 6.5E-14 1.7E-18 111.4 16.1 331 42-390 31-412 (416)
161 TIGR03403 nifS_epsilon cystein 99.6 7.6E-14 1.9E-18 111.0 15.8 323 34-391 2-377 (382)
162 cd00609 AAT_like Aspartate ami 99.6 6.9E-14 1.8E-18 111.3 15.6 315 50-385 13-350 (350)
163 PRK09082 putative aminotransfe 99.6 4.2E-14 1.1E-18 112.6 14.3 325 32-385 30-385 (386)
164 cd06502 TA_like Low-specificit 99.6 1.5E-14 3.8E-19 115.6 10.7 305 45-385 6-337 (338)
165 PRK06358 threonine-phosphate d 99.6 1.7E-13 4.2E-18 108.8 16.1 324 29-388 16-354 (354)
166 PRK04152 consensus 99.6 1.6E-13 4.2E-18 108.8 15.9 321 28-387 27-364 (364)
167 PRK07309 aromatic amino acid a 99.6 2.1E-13 5.4E-18 108.1 15.5 332 30-390 28-389 (390)
168 PRK08363 alanine aminotransfer 99.6 6.5E-13 1.6E-17 104.9 17.9 335 29-389 27-394 (398)
169 TIGR03539 DapC_actino succinyl 99.6 2.3E-13 5.8E-18 107.9 15.5 314 29-383 18-356 (357)
170 PRK01533 histidinol-phosphate 99.6 7.9E-13 2E-17 104.3 16.9 320 31-389 28-355 (366)
171 PRK06836 aspartate aminotransf 99.5 5.4E-13 1.4E-17 105.4 15.1 329 32-391 34-394 (396)
172 TIGR03402 FeS_nifS cysteine de 99.5 1.7E-12 4.3E-17 102.2 17.5 324 34-390 2-373 (379)
173 PRK07865 N-succinyldiaminopime 99.5 6.3E-13 1.6E-17 105.0 15.3 314 29-384 24-363 (364)
174 PRK07392 threonine-phosphate d 99.5 6.3E-13 1.6E-17 105.0 14.9 324 30-389 20-357 (358)
175 PRK10534 L-threonine aldolase; 99.5 2.3E-13 5.9E-18 107.8 12.4 310 34-389 1-333 (333)
176 cd06451 AGAT_like Alanine-glyo 99.5 1.4E-12 3.5E-17 102.8 16.2 280 79-388 37-356 (356)
177 PRK12414 putative aminotransfe 99.5 1.5E-12 3.8E-17 102.5 16.2 326 30-385 27-383 (384)
178 PRK09265 aminotransferase AlaT 99.5 2E-12 5.2E-17 101.6 16.8 337 29-390 30-402 (404)
179 COG0436 Aspartate/tyrosine/aro 99.5 4.3E-12 1.1E-16 99.5 18.3 333 32-390 28-392 (393)
180 PRK08153 histidinol-phosphate 99.5 4.5E-12 1.2E-16 99.4 17.8 317 35-390 36-367 (370)
181 PRK08056 threonine-phosphate d 99.5 1.5E-12 3.9E-17 102.4 15.3 320 30-389 18-355 (356)
182 PRK02948 cysteine desulfurase; 99.5 1.9E-12 4.9E-17 101.8 14.9 324 34-391 3-376 (381)
183 PRK09105 putative aminotransfe 99.5 4.1E-12 1.1E-16 99.6 16.4 315 29-388 45-372 (374)
184 PRK03317 histidinol-phosphate 99.5 3.6E-12 9.1E-17 100.0 15.8 319 35-389 29-365 (369)
185 COG0520 csdA Selenocysteine ly 99.5 2E-11 5.1E-16 95.2 18.3 330 31-388 22-404 (405)
186 PRK07590 L,L-diaminopimelate a 99.5 8.3E-12 2.1E-16 97.7 16.3 335 27-387 29-409 (409)
187 COG1104 NifS Cysteine sulfinat 99.5 9.2E-12 2.3E-16 97.4 16.3 324 33-390 3-378 (386)
188 PRK04870 histidinol-phosphate 99.5 1.7E-11 4.2E-16 95.7 17.0 314 31-387 25-356 (356)
189 PRK05839 hypothetical protein; 99.5 5.7E-12 1.5E-16 98.7 14.5 337 20-389 12-374 (376)
190 TIGR03542 DAPAT_plant LL-diami 99.4 1.2E-11 3.2E-16 96.5 14.8 332 30-387 31-402 (402)
191 PRK02610 histidinol-phosphate 99.4 1.1E-11 2.9E-16 96.8 14.4 326 30-390 23-369 (369)
192 PRK05387 histidinol-phosphate 99.4 6.5E-11 1.6E-15 91.8 17.5 320 29-388 21-352 (353)
193 cd06452 SepCysS Sep-tRNA:Cys-t 99.4 2.3E-11 5.9E-16 94.7 13.0 314 47-387 11-360 (361)
194 PRK13479 2-aminoethylphosphona 99.3 1.2E-11 3E-16 96.7 10.2 306 50-390 17-364 (368)
195 PRK08354 putative aminotransfe 99.3 1.6E-10 4E-15 89.3 15.5 294 32-386 8-309 (312)
196 cd01494 AAT_I Aspartate aminot 99.3 2.1E-12 5.3E-17 101.6 5.9 161 77-258 3-169 (170)
197 PRK13355 bifunctional HTH-doma 99.3 3E-10 7.5E-15 87.5 16.5 336 30-390 144-515 (518)
198 TIGR03301 PhnW-AepZ 2-aminoeth 99.3 6.7E-11 1.7E-15 91.7 13.0 302 50-387 11-355 (355)
199 TIGR01141 hisC histidinol-phos 99.3 1.6E-10 4E-15 89.3 13.8 308 44-385 38-376 (377)
200 KOG1368 consensus 99.3 3.8E-11 9.6E-16 93.4 10.5 322 32-388 21-367 (384)
201 COG2008 GLY1 Threonine aldolas 99.3 1.7E-10 4.4E-15 89.1 13.8 312 35-387 2-341 (342)
202 PRK07908 hypothetical protein; 99.3 2.5E-10 6.3E-15 88.0 14.2 309 30-388 19-345 (346)
203 COG0079 HisC Histidinol-phosph 99.3 7.5E-10 1.9E-14 84.9 16.2 318 33-390 23-355 (356)
204 TIGR03588 PseC UDP-4-keto-6-de 99.2 8.1E-11 2.1E-15 91.2 9.4 303 52-387 11-380 (380)
205 PRK06959 putative threonine-ph 99.2 6.9E-10 1.8E-14 85.1 14.1 305 30-391 22-335 (339)
206 PRK06855 aminotransferase; Val 99.2 1.7E-09 4.4E-14 82.5 15.7 335 29-389 29-429 (433)
207 KOG1358 consensus 99.2 6.9E-10 1.8E-14 85.1 13.6 335 16-390 79-466 (467)
208 PRK08247 cystathionine gamma-s 99.2 4.1E-10 1.1E-14 86.5 12.5 279 69-390 47-365 (366)
209 PRK05664 threonine-phosphate d 99.2 6.4E-10 1.6E-14 85.3 13.3 305 30-388 18-327 (330)
210 TIGR01977 am_tr_V_EF2568 cyste 99.2 1.4E-09 3.7E-14 83.0 14.4 311 49-385 12-383 (384)
211 COG1168 MalY Bifunctional PLP- 99.2 4E-09 1E-13 80.1 16.6 342 20-390 11-387 (388)
212 KOG1357 consensus 99.2 6.5E-10 1.7E-14 85.3 12.4 208 158-388 245-501 (519)
213 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.2 1.7E-09 4.3E-14 82.6 14.5 305 51-387 11-374 (375)
214 PRK08249 cystathionine gamma-s 99.2 4.3E-10 1.1E-14 86.5 11.3 282 66-391 56-395 (398)
215 PRK06425 histidinol-phosphate 99.2 3.3E-10 8.3E-15 87.2 10.3 294 33-387 17-331 (332)
216 PRK05967 cystathionine beta-ly 99.2 6.2E-10 1.6E-14 85.4 11.7 280 69-390 59-389 (392)
217 PRK09028 cystathionine beta-ly 99.2 6.7E-11 1.7E-15 91.7 6.8 281 69-391 56-389 (394)
218 TIGR01326 OAH_OAS_sulfhy O-ace 99.2 2.2E-11 5.7E-16 94.9 4.2 286 61-388 44-434 (434)
219 PRK04781 histidinol-phosphate 99.2 1.9E-09 4.8E-14 82.3 13.8 295 69-388 52-360 (362)
220 PRK04311 selenocysteine syntha 99.2 1.3E-09 3.3E-14 83.3 12.8 332 33-388 82-464 (465)
221 PRK04635 histidinol-phosphate 99.2 1.8E-09 4.7E-14 82.3 13.5 284 69-386 48-344 (346)
222 COG1167 ARO8 Transcriptional r 99.2 1.8E-09 4.5E-14 82.4 13.4 338 29-391 86-457 (459)
223 PRK11658 UDP-4-amino-4-deoxy-L 99.2 7.9E-10 2E-14 84.7 11.6 302 51-389 14-379 (379)
224 PRK07503 methionine gamma-lyas 99.2 5.7E-10 1.5E-14 85.6 10.8 282 66-390 57-397 (403)
225 PRK04366 glycine dehydrogenase 99.2 1.6E-09 4.1E-14 82.7 13.0 317 43-390 74-452 (490)
226 PRK06176 cystathionine gamma-s 99.1 1.1E-09 2.9E-14 83.7 11.6 278 68-390 44-379 (379)
227 pfam01041 DegT_DnrJ_EryC1 DegT 99.1 4.5E-10 1.1E-14 86.3 9.5 300 51-384 5-363 (363)
228 TIGR01265 tyr_nico_aTase tyros 99.1 5.2E-09 1.3E-13 79.4 14.8 317 44-388 41-421 (424)
229 PRK03967 histidinol-phosphate 99.1 1.1E-08 2.7E-13 77.3 15.8 311 31-392 17-337 (337)
230 PRK06460 hypothetical protein; 99.1 1.3E-10 3.2E-15 89.9 5.9 279 70-390 41-375 (375)
231 PRK07811 cystathionine gamma-s 99.1 1.1E-09 2.8E-14 83.8 10.7 279 68-390 52-386 (386)
232 PRK06234 methionine gamma-lyas 99.1 1.6E-09 4E-14 82.8 11.1 283 66-391 56-398 (399)
233 PRK07504 O-succinylhomoserine 99.1 1.4E-09 3.6E-14 83.1 10.9 303 45-390 37-396 (397)
234 cd00616 AHBA_syn 3-amino-5-hyd 99.1 1.4E-09 3.6E-14 83.1 10.8 296 54-384 2-352 (352)
235 PRK08045 cystathionine gamma-s 99.1 1.3E-09 3.3E-14 83.3 10.5 279 69-390 47-383 (386)
236 PRK08064 cystathionine beta-ly 99.1 2.9E-10 7.3E-15 87.6 6.9 278 69-391 49-384 (390)
237 cd00614 CGS_like CGS_like: Cys 99.1 1.9E-09 4.8E-14 82.2 10.9 282 66-388 32-369 (369)
238 PRK07671 cystathionine beta-ly 99.1 1.9E-09 4.8E-14 82.2 10.7 276 67-387 43-376 (377)
239 COG0075 Serine-pyruvate aminot 99.1 2.6E-09 6.7E-14 81.3 11.1 308 50-391 17-365 (383)
240 COG2873 MET17 O-acetylhomoseri 99.1 1.4E-10 3.6E-15 89.6 4.6 312 43-389 32-425 (426)
241 PRK07810 O-succinylhomoserine 99.1 5.6E-10 1.4E-14 85.7 7.3 260 43-341 43-329 (406)
242 PRK08861 cystathionine gamma-s 99.1 2.4E-09 6.2E-14 81.5 10.6 279 68-389 47-383 (388)
243 PRK08114 cystathionine beta-ly 99.0 4.1E-09 1E-13 80.1 11.4 280 69-390 57-394 (395)
244 PRK08134 O-acetylhomoserine am 99.0 8.4E-09 2.1E-13 78.0 12.8 168 65-259 55-225 (433)
245 PRK05994 O-acetylhomoserine am 99.0 3.8E-09 9.7E-14 80.2 10.9 166 65-258 54-223 (426)
246 PRK08776 cystathionine gamma-s 99.0 7E-10 1.8E-14 85.1 7.0 235 69-342 55-317 (405)
247 pfam01212 Beta_elim_lyase Beta 99.0 4.2E-10 1.1E-14 86.5 5.8 238 48-315 9-268 (288)
248 PRK06767 methionine gamma-lyas 99.0 4.7E-09 1.2E-13 79.6 11.1 283 66-390 53-386 (386)
249 PRK08133 O-succinylhomoserine 99.0 5.8E-10 1.5E-14 85.6 6.1 280 65-388 52-390 (391)
250 PRK07050 cystathionine beta-ly 99.0 1.4E-08 3.5E-13 76.6 12.7 281 66-389 57-391 (394)
251 PRK07582 cystathionine gamma-l 99.0 6.2E-09 1.6E-13 78.9 10.8 275 68-390 47-369 (370)
252 PRK01688 histidinol-phosphate 99.0 2.1E-08 5.5E-13 75.3 13.5 286 69-385 52-352 (355)
253 PRK05968 hypothetical protein; 99.0 6.1E-09 1.5E-13 78.9 10.5 282 65-391 54-388 (389)
254 PRK00451 glycine dehydrogenase 99.0 7.8E-08 2E-12 71.7 16.0 312 43-388 75-449 (449)
255 PRK07269 cystathionine gamma-s 99.0 8.2E-09 2.1E-13 78.1 11.0 276 68-388 48-363 (364)
256 TIGR03235 DNA_S_dndA cysteine 99.0 3.8E-09 9.7E-14 80.2 9.2 289 34-355 1-319 (354)
257 PRK08248 O-acetylhomoserine am 99.0 5.5E-09 1.4E-13 79.2 9.5 167 65-258 55-224 (431)
258 PRK09331 Sep-tRNA:Cys-tRNA syn 98.9 3.3E-08 8.4E-13 74.1 12.6 319 47-390 29-381 (386)
259 pfam01053 Cys_Met_Meta_PP Cys/ 98.9 3.9E-09 9.9E-14 80.2 7.8 279 66-388 44-381 (381)
260 PRK07812 O-acetylhomoserine am 98.9 5.4E-08 1.4E-12 72.7 13.6 167 65-258 60-230 (436)
261 PRK13520 L-tyrosine decarboxyl 98.9 2.5E-07 6.3E-12 68.4 16.5 318 47-389 34-375 (375)
262 PRK03262 consensus 98.9 4.8E-08 1.2E-12 73.1 12.8 286 69-385 52-352 (355)
263 PRK05613 O-acetylhomoserine am 98.9 9.8E-08 2.5E-12 71.0 13.7 167 65-258 60-230 (437)
264 PRK06084 O-acetylhomoserine am 98.9 5.1E-08 1.3E-12 72.9 11.8 164 68-258 52-218 (424)
265 KOG1549 consensus 98.9 1.1E-07 2.9E-12 70.6 13.5 326 31-390 43-419 (428)
266 PRK08574 cystathionine gamma-s 98.9 2.1E-08 5.2E-13 75.5 9.6 279 69-390 48-384 (384)
267 PRK06702 O-acetylhomoserine am 98.8 1.7E-07 4.4E-12 69.4 13.4 167 65-258 52-222 (432)
268 COG0399 WecE Predicted pyridox 98.8 1.7E-07 4.5E-12 69.4 13.1 302 51-389 15-373 (374)
269 PRK05939 hypothetical protein; 98.8 7.2E-08 1.8E-12 71.9 10.4 165 66-258 38-205 (396)
270 PRK08637 hypothetical protein; 98.8 3.5E-07 9E-12 67.4 13.5 281 93-391 73-386 (386)
271 PRK07049 methionine gamma-lyas 98.7 2.1E-08 5.4E-13 75.3 6.2 290 66-389 75-426 (427)
272 KOG0259 consensus 98.7 5.7E-06 1.5E-10 59.5 17.3 319 43-389 63-433 (447)
273 TIGR01979 sufS cysteine desulf 98.7 1.1E-06 2.9E-11 64.0 13.4 341 12-390 5-408 (409)
274 cd00617 Tnase_like Tryptophana 98.7 8.4E-07 2.1E-11 64.9 12.7 326 31-389 19-408 (431)
275 cd00613 GDC-P Glycine cleavage 98.7 8.5E-07 2.2E-11 64.9 12.6 316 39-383 23-398 (398)
276 COG3844 Kynureninase [Amino ac 98.6 1.9E-05 5E-10 56.0 18.4 336 26-392 26-405 (407)
277 PRK13237 tyrosine phenol-lyase 98.6 1.3E-06 3.2E-11 63.8 11.9 326 30-389 43-433 (459)
278 COG1003 GcvP Glycine cleavage 98.6 3.8E-06 9.6E-11 60.7 14.0 290 77-390 112-448 (496)
279 KOG0053 consensus 98.6 1.2E-06 3.1E-11 63.8 11.0 191 69-286 72-267 (409)
280 KOG2862 consensus 98.6 2.8E-06 7.1E-11 61.5 12.7 300 42-389 37-382 (385)
281 COG0626 MetC Cystathionine bet 98.6 1.8E-06 4.5E-11 62.8 11.6 279 69-390 58-395 (396)
282 PRK12566 glycine dehydrogenase 98.6 5.5E-06 1.4E-10 59.6 14.0 291 77-389 546-876 (954)
283 TIGR01325 O_suc_HS_sulf O-succ 98.5 1.7E-06 4.5E-11 62.8 11.1 249 56-340 35-309 (386)
284 PRK05367 glycine dehydrogenase 98.5 3.3E-06 8.3E-11 61.1 12.3 292 77-389 545-875 (955)
285 TIGR01264 tyr_amTase_E tyrosin 98.5 6.7E-06 1.7E-10 59.0 13.7 313 49-388 50-412 (415)
286 PRK13238 tnaA tryptophanase; P 98.5 3.5E-06 9E-11 60.8 12.1 325 30-389 43-434 (461)
287 pfam03841 SelA L-seryl-tRNA se 98.5 1.1E-06 2.9E-11 64.1 9.2 231 44-296 11-263 (367)
288 cd06450 DOPA_deC_like DOPA dec 98.5 2.1E-05 5.3E-10 55.8 15.2 272 72-386 32-345 (345)
289 PRK06434 cystathionine gamma-l 98.5 3.3E-06 8.4E-11 61.1 10.9 278 65-389 55-384 (384)
290 PRK02769 histidine decarboxyla 98.4 6.8E-06 1.7E-10 59.0 11.4 263 92-388 87-371 (380)
291 KOG0256 consensus 98.3 7.3E-05 1.9E-09 52.2 14.0 289 74-389 125-461 (471)
292 PTZ00094 serine hydroxymethylt 98.3 0.00018 4.6E-09 49.7 15.7 277 83-389 86-405 (450)
293 COG3977 Alanine-alpha-ketoisov 98.2 6.9E-05 1.8E-09 52.4 13.3 209 165-390 170-412 (417)
294 COG0403 GcvP Glycine cleavage 98.2 0.00014 3.5E-09 50.5 13.3 316 36-387 75-448 (450)
295 PRK13034 serine hydroxymethylt 98.1 0.00051 1.3E-08 46.7 15.4 280 83-390 86-396 (422)
296 COG3033 TnaA Tryptophanase [Am 98.1 0.00027 7E-09 48.5 13.8 333 30-389 44-444 (471)
297 KOG0257 consensus 98.1 2.3E-05 5.9E-10 55.5 8.2 262 41-315 30-326 (420)
298 cd00378 SHMT Serine-glycine hy 98.1 0.00072 1.8E-08 45.7 15.8 281 83-389 74-385 (402)
299 PRK00011 glyA serine hydroxyme 98.0 0.00061 1.6E-08 46.2 14.8 278 84-389 81-388 (415)
300 pfam01276 OKR_DC_1 Orn/Lys/Arg 98.0 0.00011 2.7E-09 51.2 10.3 284 64-369 55-411 (417)
301 pfam00464 SHMT Serine hydroxym 97.9 0.0011 2.8E-08 44.6 14.3 275 78-383 69-380 (380)
302 KOG2040 consensus 97.9 0.0025 6.3E-08 42.2 16.1 291 77-386 585-915 (1001)
303 PRK13580 serine hydroxymethylt 97.9 0.0025 6.4E-08 42.2 16.1 286 84-390 107-448 (493)
304 COG0076 GadB Glutamate decarbo 97.9 0.00036 9.1E-09 47.7 11.0 289 43-353 64-398 (460)
305 TIGR02080 O_succ_thio_ly O-suc 97.9 0.0003 7.8E-09 48.2 10.6 289 46-389 35-382 (383)
306 TIGR01328 met_gam_lyase methio 97.8 0.00017 4.4E-09 49.8 9.0 283 65-390 50-392 (392)
307 TIGR01140 CobD L-threonine-O-3 97.8 0.00033 8.5E-09 47.9 10.3 314 30-385 3-348 (349)
308 TIGR02326 transamin_PhnW 2-ami 97.8 0.0007 1.8E-08 45.8 11.4 282 75-389 37-365 (366)
309 TIGR02539 SepCysS Sep-tRNA:Cys 97.8 0.00075 1.9E-08 45.6 11.1 287 73-389 50-379 (381)
310 cd00615 Orn_deC_like Ornithine 97.7 0.00016 4E-09 50.1 6.7 223 69-313 53-293 (294)
311 COG1103 Archaea-specific pyrid 97.6 0.0015 3.7E-08 43.7 11.1 313 50-389 30-380 (382)
312 KOG3846 consensus 97.6 0.0069 1.8E-07 39.3 14.2 332 44-391 74-463 (465)
313 COG0112 GlyA Glycine/serine hy 97.5 0.0095 2.4E-07 38.4 16.9 313 50-390 39-391 (413)
314 PRK09257 aromatic amino acid a 97.5 0.00042 1.1E-08 47.2 7.0 325 35-388 29-397 (397)
315 TIGR03531 selenium_SpcS O-phos 97.5 0.00049 1.2E-08 46.8 6.7 196 165-387 190-444 (444)
316 TIGR02006 IscS cysteine desulf 97.2 0.019 4.8E-07 36.5 12.6 332 33-391 5-381 (404)
317 pfam05889 SLA_LP_auto_ag Solub 97.2 0.0054 1.4E-07 40.0 9.4 201 163-388 141-389 (389)
318 TIGR01437 selA_rel pyridoxal p 97.1 0.0098 2.5E-07 38.3 10.5 328 31-389 8-389 (391)
319 TIGR03576 pyridox_MJ0158 pyrid 96.9 0.0024 6E-08 42.4 5.8 243 90-366 72-323 (346)
320 TIGR01814 kynureninase kynuren 96.9 0.0079 2E-07 38.9 8.4 330 44-387 44-443 (444)
321 COG1448 TyrB Aspartate/tyrosin 96.7 0.058 1.5E-06 33.3 11.3 194 180-387 176-396 (396)
322 KOG0634 consensus 96.7 0.067 1.7E-06 32.9 12.2 202 185-389 213-466 (472)
323 pfam00282 Pyridoxal_deC Pyrido 96.5 0.002 5.2E-08 42.8 3.0 177 73-261 74-277 (370)
324 pfam02347 GDC-P Glycine cleava 96.5 0.054 1.4E-06 33.5 10.2 308 38-383 67-429 (429)
325 KOG1383 consensus 96.4 0.089 2.3E-06 32.1 10.9 339 28-392 75-449 (491)
326 KOG0633 consensus 96.4 0.092 2.3E-06 32.0 11.1 275 78-386 73-374 (375)
327 COG1921 SelA Selenocysteine sy 96.2 0.026 6.6E-07 35.6 7.2 246 33-303 21-281 (395)
328 PRK13578 ornithine decarboxyla 96.1 0.14 3.5E-06 30.8 12.3 45 341-385 517-561 (720)
329 TIGR02617 tnaA_trp_ase tryptop 95.9 0.017 4.4E-07 36.7 5.1 346 18-391 28-444 (468)
330 TIGR01976 am_tr_V_VC1184 cyste 95.9 0.17 4.4E-06 30.2 14.7 314 33-383 23-410 (410)
331 KOG2467 consensus 94.9 0.13 3.2E-06 31.1 6.7 184 193-388 199-425 (477)
332 PRK12566 glycine dehydrogenase 93.3 0.74 1.9E-05 26.0 13.6 298 42-384 85-439 (954)
333 TIGR00461 gcvP glycine dehydro 93.0 0.81 2.1E-05 25.8 14.8 286 77-386 554-888 (965)
334 PRK05367 glycine dehydrogenase 92.2 1 2.6E-05 25.1 13.9 265 81-386 132-443 (955)
335 pfam04864 Alliinase_C Allinase 91.8 1.2 2.9E-05 24.8 8.3 187 181-386 139-362 (363)
336 KOG0629 consensus 91.2 1.3 3.4E-05 24.4 8.0 267 91-388 161-508 (510)
337 KOG0258 consensus 91.0 0.53 1.4E-05 27.0 5.0 198 165-369 199-456 (475)
338 TIGR00474 selA L-seryl-tRNA se 89.9 1.7 4.4E-05 23.6 8.3 273 23-319 48-355 (448)
339 COG1453 Predicted oxidoreducta 86.0 0.93 2.4E-05 25.4 3.5 200 30-267 46-263 (391)
340 COG1982 LdcC Arginine/lysine/o 81.0 4.7 0.00012 20.8 12.0 279 76-384 72-403 (557)
341 PRK13475 ribulose bisphosphate 80.1 1.7 4.4E-05 23.7 2.9 91 225-316 349-441 (459)
342 TIGR00693 thiE thiamine-phosph 80.1 0.53 1.4E-05 27.0 0.3 120 195-318 51-186 (210)
343 KOG2433 consensus 78.1 3.3 8.3E-05 21.8 3.8 16 362-378 530-545 (577)
344 cd03318 MLE Muconate Lactonizi 77.7 0.39 9.9E-06 27.9 -1.0 90 193-289 222-312 (365)
345 cd02691 PurM-like2 AIR synthas 77.5 6 0.00015 20.1 5.0 67 189-255 98-181 (346)
346 KOG4166 consensus 75.3 1 2.7E-05 25.1 0.6 66 192-261 471-542 (675)
347 TIGR02360 pbenz_hydroxyl 4-hyd 73.2 5 0.00013 20.6 3.7 102 22-143 73-176 (393)
348 cd02197 HypE HypE (Hydrogenase 72.7 1.8 4.6E-05 23.5 1.3 76 174-249 67-164 (293)
349 pfam06838 Alum_res Aluminium r 72.4 8.1 0.00021 19.2 8.7 200 48-266 25-246 (405)
350 TIGR01329 cysta_beta_ly_E cyst 70.3 5.3 0.00014 20.4 3.3 288 70-389 45-412 (415)
351 TIGR02534 mucon_cyclo muconate 70.1 1.6 4E-05 23.9 0.6 96 179-287 204-310 (369)
352 TIGR02151 IPP_isom_2 isopenten 66.6 2.5 6.4E-05 22.6 1.0 75 183-258 162-261 (349)
353 TIGR02618 tyr_phenol_ly tyrosi 65.3 3.9 9.9E-05 21.3 1.8 218 166-389 159-426 (450)
354 KOG3843 consensus 63.7 5.2 0.00013 20.5 2.2 222 147-390 121-403 (432)
355 PRK02615 thiamine-phosphate py 63.5 2.2 5.6E-05 23.0 0.2 35 198-232 187-224 (345)
356 CHL00040 rbcL ribulose-1,5-bis 63.3 5.4 0.00014 20.4 2.2 85 226-316 361-463 (477)
357 pfam07505 Gp37_Gp68 Phage prot 63.1 12 0.00032 18.0 5.6 45 190-249 197-241 (253)
358 pfam02606 LpxK Tetraacyldisacc 62.9 13 0.00032 18.0 4.6 119 94-256 43-168 (318)
359 TIGR01324 cysta_beta_ly_B cyst 59.6 14 0.00036 17.6 4.0 177 61-267 44-228 (389)
360 PRK05437 isopentenyl pyrophosp 55.0 4.7 0.00012 20.8 0.7 40 183-224 161-200 (351)
361 TIGR01136 cysKM cysteine synth 54.7 17 0.00044 17.1 4.8 80 30-126 61-142 (315)
362 PRK07105 pyridoxamine kinase; 53.4 9.6 0.00024 18.8 2.1 36 178-213 105-142 (284)
363 PRK00507 deoxyribose-phosphate 53.3 18 0.00046 17.0 3.8 205 32-292 7-217 (221)
364 cd03322 rpsA The starvation se 52.7 2.3 5.9E-05 22.8 -1.2 89 194-288 198-287 (361)
365 COG2861 Uncharacterized protei 52.5 19 0.00047 16.9 3.5 74 277-358 161-240 (250)
366 PRK04208 rbcL ribulose bisopho 51.8 15 0.00038 17.5 2.9 86 226-317 353-456 (467)
367 cd03085 PGM1 Phosphoglucomutas 49.9 20 0.0005 16.7 3.2 25 201-231 329-353 (548)
368 cd01522 RHOD_1 Member of the R 48.6 21 0.00053 16.6 3.2 50 79-136 53-104 (117)
369 TIGR01458 HAD-SF-IIA-hyp3 HAD- 47.9 12 0.00031 18.1 1.9 50 193-242 180-245 (258)
370 PRK03080 phosphoserine aminotr 47.1 22 0.00057 16.3 10.9 187 182-391 145-378 (381)
371 cd00308 enolase_like Enolase-s 46.8 2.9 7.5E-05 22.1 -1.4 67 169-244 113-180 (229)
372 pfam04298 Zn_peptidase_2 Putat 46.7 9.1 0.00023 18.9 1.1 69 74-155 37-111 (222)
373 PRK00313 lpxK tetraacyldisacch 46.3 14 0.00036 17.7 2.0 119 94-256 59-185 (332)
374 TIGR01394 TypA_BipA GTP-bindin 45.7 24 0.0006 16.2 5.7 121 234-380 459-582 (609)
375 cd01020 TroA_b Metal binding p 45.6 21 0.00053 16.5 2.8 27 193-219 189-215 (264)
376 PRK05409 hypothetical protein; 45.3 7.5 0.00019 19.5 0.5 32 187-218 67-98 (283)
377 PRK03512 thiamine-phosphate py 44.7 7.2 0.00018 19.6 0.3 47 165-217 21-70 (211)
378 pfam05114 DUF692 Protein of un 44.1 8.4 0.00021 19.1 0.6 33 186-218 63-95 (275)
379 TIGR02423 protocat_alph protoc 43.5 12 0.00031 18.1 1.4 64 177-250 56-139 (203)
380 pfam05690 ThiG Thiazole biosyn 43.0 12 0.0003 18.2 1.2 152 47-224 17-185 (246)
381 TIGR00551 nadB L-aspartate oxi 42.8 14 0.00035 17.8 1.5 16 44-59 70-85 (546)
382 PRK06512 thiamine-phosphate py 42.7 7.9 0.0002 19.3 0.3 51 166-219 29-81 (221)
383 cd02811 IDI-2_FMN Isopentenyl- 41.8 12 0.0003 18.2 1.0 39 183-223 153-191 (326)
384 PRK09490 metH B12-dependent me 41.6 27 0.00069 15.8 4.0 27 196-225 468-497 (1229)
385 TIGR02902 spore_lonB ATP-depen 41.4 14 0.00036 17.7 1.4 52 161-218 122-184 (532)
386 cd03315 MLE_like Muconate lact 40.9 4.2 0.00011 21.1 -1.3 57 179-244 158-215 (265)
387 TIGR03266 methan_mark_1 putati 40.5 26 0.00067 15.9 2.7 12 342-353 326-337 (376)
388 cd06061 PurM-like1 AIR synthas 39.8 12 0.0003 18.2 0.8 45 174-218 68-119 (298)
389 PRK08176 pdxK pyridoxal kinase 39.7 14 0.00035 17.8 1.1 36 178-213 120-157 (281)
390 TIGR02318 phosphono_phnM phosp 39.5 16 0.00041 17.3 1.5 229 32-295 41-312 (391)
391 TIGR02082 metH methionine synt 39.3 30 0.00075 15.6 6.2 30 31-60 28-59 (1265)
392 cd00611 PSAT_like Phosphoserin 39.0 30 0.00076 15.5 10.8 169 205-385 158-352 (355)
393 pfam09940 DUF2172 Domain of un 38.6 14 0.00036 17.7 1.0 37 14-52 17-53 (384)
394 PRK07564 phosphoglucomutase; V 38.5 27 0.0007 15.8 2.5 24 201-230 353-376 (544)
395 pfam00883 Peptidase_M17 Cytoso 38.5 16 0.00042 17.2 1.4 12 206-217 167-178 (312)
396 PRK13805 bifunctional acetalde 38.3 12 0.0003 18.2 0.6 51 162-219 469-520 (862)
397 cd03321 mandelate_racemase Man 38.2 9.5 0.00024 18.8 0.1 63 194-257 221-284 (355)
398 CHL00162 thiG thiamin biosynth 37.9 31 0.00079 15.4 3.2 159 47-224 25-200 (267)
399 PRK00125 pyrF orotidine 5'-pho 37.8 31 0.00079 15.4 5.3 133 199-331 74-220 (277)
400 pfam06970 RepA_N Replication i 37.1 26 0.00067 15.9 2.2 33 27-59 43-75 (76)
401 PRK06264 cbiC precorrin-8X met 36.5 19 0.00048 16.8 1.4 56 234-296 150-209 (210)
402 COG0352 ThiE Thiamine monophos 35.1 13 0.00034 17.9 0.4 51 166-220 24-76 (211)
403 cd02195 SelD Selenophosphate s 34.7 12 0.0003 18.2 0.1 74 175-250 82-177 (287)
404 cd03327 MR_like_2 Mandelate ra 34.3 10 0.00026 18.5 -0.2 51 194-244 206-257 (341)
405 KOG1528 consensus 33.9 36 0.00092 15.0 3.2 21 372-392 331-351 (351)
406 KOG0628 consensus 33.6 36 0.00092 15.0 11.5 216 166-391 219-473 (511)
407 TIGR03247 glucar-dehydr glucar 33.3 37 0.00093 15.0 6.5 37 200-236 269-305 (441)
408 KOG1270 consensus 32.3 14 0.00036 17.7 0.2 46 193-238 172-218 (282)
409 cd03316 MR_like Mandelate race 32.1 14 0.00037 17.6 0.2 51 194-244 224-275 (357)
410 KOG0791 consensus 31.9 22 0.00056 16.4 1.2 11 194-204 177-187 (374)
411 COG2156 KdpC K+-transporting A 31.7 39 0.00099 14.8 4.0 20 42-61 85-104 (190)
412 pfam06418 CTP_synth_N CTP synt 31.6 39 0.001 14.8 3.2 61 180-242 136-208 (275)
413 cd07560 Peptidase_S41_CPP C-te 31.4 39 0.001 14.8 6.7 143 71-242 58-210 (211)
414 cd01528 RHOD_2 Member of the R 31.3 35 0.0009 15.1 2.1 37 91-135 61-97 (101)
415 TIGR00224 pckA phosphoenolpyru 30.8 40 0.001 14.7 2.4 56 67-130 18-75 (549)
416 cd00983 recA RecA is a bacter 29.5 42 0.0011 14.6 3.3 18 198-215 170-187 (325)
417 KOG1412 consensus 28.9 43 0.0011 14.5 6.3 189 189-390 191-406 (410)
418 PRK09517 multifunctional thiam 28.5 19 0.00047 16.9 0.3 36 176-211 326-362 (738)
419 PRK11524 putative methyltransf 28.4 32 0.00082 15.3 1.5 12 303-314 252-263 (284)
420 COG0062 Uncharacterized conser 28.3 44 0.0011 14.4 2.7 65 177-245 119-185 (203)
421 PRK00913 leucyl aminopeptidase 27.8 45 0.0012 14.4 3.2 62 190-251 185-266 (491)
422 COG1850 RbcL Ribulose 1,5-bisp 27.4 46 0.0012 14.3 3.0 18 233-250 341-358 (429)
423 PRK08286 cbiC precorrin-8X met 27.2 27 0.00068 15.9 0.9 53 235-294 156-212 (213)
424 PHA01747 putative ATP-dependen 27.1 21 0.00053 16.5 0.4 89 192-300 219-316 (425)
425 TIGR01812 sdhA_frdA_Gneg succi 27.1 47 0.0012 14.3 2.9 29 211-246 412-444 (636)
426 pfam02603 Hpr_kinase_N HPr Ser 27.0 27 0.0007 15.8 1.0 42 166-217 71-112 (127)
427 TIGR00476 selD selenide, water 26.8 40 0.001 14.7 1.8 126 193-333 128-269 (372)
428 PRK13699 putative methylase; P 26.8 39 0.00099 14.8 1.7 10 374-383 196-205 (227)
429 PRK00943 selenophosphate synth 26.5 24 0.00062 16.1 0.6 75 175-251 90-184 (347)
430 cd03325 D-galactonate_dehydrat 26.4 18 0.00045 17.0 -0.1 52 193-244 210-262 (352)
431 pfam00586 AIRS AIR synthase re 26.2 20 0.00052 16.6 0.2 41 174-214 44-91 (95)
432 PTZ00276 biotin/lipoate protei 26.1 48 0.0012 14.2 2.2 10 101-110 18-27 (245)
433 pfam02110 HK Hydroxyethylthiaz 26.0 49 0.0012 14.1 4.8 20 196-215 138-157 (246)
434 pfam00016 RuBisCO_large Ribulo 25.6 49 0.0013 14.1 3.0 62 225-292 207-270 (309)
435 PTZ00225 60S ribosomal protein 25.6 8.8 0.00022 19.0 -1.8 92 200-312 95-191 (214)
436 TIGR00614 recQ_fam ATP-depende 25.0 51 0.0013 14.0 3.3 134 194-355 117-268 (497)
437 cd03319 L-Ala-DL-Glu_epimerase 24.8 16 0.0004 17.4 -0.7 29 194-222 212-240 (316)
438 PRK05355 phosphoserine aminotr 24.7 51 0.0013 14.0 7.6 166 209-386 165-355 (360)
439 cd03317 NAAAR N-acylamino acid 24.6 23 0.0006 16.2 0.2 49 195-243 213-262 (354)
440 TIGR00095 TIGR00095 putative m 24.3 52 0.0013 13.9 3.4 79 297-391 83-164 (210)
441 cd00245 Glm_e Coenzyme B12-dep 24.0 34 0.00087 15.2 1.0 121 190-318 211-337 (428)
442 cd04728 ThiG Thiazole synthase 23.6 54 0.0014 13.9 2.2 150 47-224 18-186 (248)
443 TIGR02089 TTC tartrate dehydro 23.5 19 0.00048 16.9 -0.4 40 271-317 283-329 (355)
444 cd04915 ACT_AK-Ectoine_2 ACT d 23.3 55 0.0014 13.8 3.0 48 342-389 19-66 (66)
445 PRK04205 hypothetical protein; 23.3 24 0.00062 16.1 0.1 28 196-237 161-188 (222)
446 COG5599 PTP2 Protein tyrosine 23.1 25 0.00064 16.0 0.2 11 219-229 226-236 (302)
447 TIGR01455 glmM phosphoglucosam 23.0 55 0.0014 13.8 6.2 97 281-388 345-449 (450)
448 KOG0453 consensus 22.8 51 0.0013 14.0 1.7 15 131-145 263-277 (778)
449 cd01521 RHOD_PspE2 Member of t 22.3 57 0.0015 13.7 2.2 51 76-135 50-104 (110)
450 TIGR02336 TIGR02336 conserved 22.2 57 0.0015 13.7 2.5 105 154-262 486-626 (767)
451 cd01125 repA Hexameric Replica 22.0 58 0.0015 13.7 1.9 52 164-215 98-154 (239)
452 COG0414 PanC Panthothenate syn 21.8 59 0.0015 13.6 2.4 30 217-246 116-151 (285)
453 cd02812 PcrB_like PcrB_like pr 21.7 59 0.0015 13.6 4.4 33 77-112 15-51 (219)
454 TIGR01369 CPSaseII_lrg carbamo 21.6 59 0.0015 13.6 2.2 20 201-220 524-543 (1089)
455 KOG3040 consensus 21.4 41 0.001 14.6 1.0 38 48-86 23-63 (262)
456 pfam03853 YjeF_N YjeF-related 21.3 60 0.0015 13.6 2.7 63 178-244 101-165 (170)
457 COG5011 Uncharacterized protei 21.3 60 0.0015 13.6 1.8 42 91-134 4-45 (228)
458 COG1105 FruK Fructose-1-phosph 21.0 38 0.00096 14.9 0.7 24 194-217 143-166 (310)
459 pfam06153 DUF970 Protein of un 20.9 61 0.0015 13.5 6.9 56 331-389 3-66 (109)
460 PRK09279 pyruvate phosphate di 20.9 61 0.0016 13.5 3.4 30 361-390 700-729 (875)
461 TIGR02085 meth_trns_rumB 23S r 20.8 33 0.00084 15.3 0.4 46 196-244 223-271 (386)
462 COG1932 SerC Phosphoserine ami 20.8 61 0.0016 13.5 15.1 167 211-390 171-364 (365)
463 pfam02669 KdpC K+-transporting 20.7 61 0.0016 13.5 3.6 19 43-61 84-102 (188)
464 PRK05935 biotin--protein ligas 20.5 62 0.0016 13.5 2.2 39 195-233 14-53 (190)
465 COG2265 TrmA SAM-dependent met 20.4 62 0.0016 13.4 4.4 12 279-290 325-336 (432)
466 KOG2470 consensus 20.4 62 0.0016 13.5 1.7 14 48-61 82-95 (510)
467 PRK09939 putative oxidoreducta 20.1 63 0.0016 13.4 2.6 32 27-62 204-235 (759)
No 1
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases; InterPro: IPR004636 This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from Escherichia coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (2.6.1.11 from EC), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism . Members of this family may also act on ornithine, like ornithine aminotransferase (2.6.1.13 from EC) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (2.6.1.17 from EC, DapC, an enzyme of lysine biosynthesis) . ; GO: 0008483 transaminase activity, 0006525 arginine metabolic process.
Probab=100.00 E-value=0 Score=920.93 Aligned_cols=382 Identities=48% Similarity=0.794 Sum_probs=374.3
Q ss_pred EECCCCCCCC-EEEEEECCCEEEE-CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 4515588887-4898501037996-7997646410226743578789999999999997314506875781899999865
Q gi|254780432|r 6 FLFNTYDQSD-IRFEKGKGAWLFS-ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHL 83 (392)
Q Consensus 6 ~~~~~~~~~p-~~i~~a~G~~i~d-~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L 83 (392)
|++++|+|.| +.|+||+|+|||| .|||+||||++|+++++|||+||++++|+++|+++|+|++++|.+++..+||++|
T Consensus 1 ~~~~~Y~R~~d~~i~rG~G~~v~Dd~~GK~YlDf~aGIAV~~LGH~hP~l~Ea~~~Q~~kL~H~SNlY~~~~~~~LA~kL 80 (402)
T TIGR00707 1 YLMQTYGRLPDIVIVRGKGAYVYDDVNGKEYLDFVAGIAVNALGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKL 80 (402)
T ss_pred CCCCCCCCCCCEEEECCCCCEEEECCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHH
T ss_conf 90057688765016316640898767894652010022440113578899999998662406607765580899999999
Q ss_pred HHHCCCC-------CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2010133-------312356555403567776654320013478600234354656543212345532113479998643
Q gi|254780432|r 84 IHSTFAD-------RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIE 156 (392)
Q Consensus 84 ~~~~~~~-------~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~ 156 (392)
++.++.| ||||||||+||||+|+|+||+|+..+ ...|++||||.+||||||++++|+|++|+|+++|+|+++
T Consensus 81 v~~~~~dgGqhd~~rvFFCNSGaEAnEAAlKlARk~~~~~-g~~k~~ivaf~naFHGRT~g~LsaTgqpKy~~~F~PLvp 159 (402)
T TIGR00707 81 VEHSGADGGQHDASRVFFCNSGAEANEAALKLARKYTGDK-GKEKKKIVAFENAFHGRTMGALSATGQPKYQKPFEPLVP 159 (402)
T ss_pred HHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCC-CCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 9997046883023266751474789999999989864022-788653888870776300454300477645685788423
Q ss_pred CCCCCCCHH-HHHHHHHCCCC-----CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 332221002-68875410123-----322223332222112462101232211022345721310110034444555310
Q gi|254780432|r 157 GFDQAKFCD-LQSLKNQISND-----TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFA 230 (392)
Q Consensus 157 ~~~~~~~~d-~~~l~~~~~~~-----iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~ 230 (392)
+|.+++||| ++++++.+.++ +||||+||||||||++|++.+||++||++|+++|+|||+||||||+||||+|||
T Consensus 160 gf~y~~yNDe~~~l~~~i~~~~eg~rtAAvivEpiQGEgGV~pa~~~fL~a~r~lc~~~~~LLI~DEVQtG~GRTG~~fA 239 (402)
T TIGR00707 160 GFKYVPYNDEIEALKEAIDDEKEGDRTAAVIVEPIQGEGGVVPADKEFLKALRELCEDKDALLIFDEVQTGLGRTGKLFA 239 (402)
T ss_pred CCEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHH
T ss_conf 81244488978999998502577871889998532178653348778999999998648918999447528774332233
Q ss_pred CCCCC--CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHH
Q ss_conf 11124--5453021034444443443210001112222233223453211110012334554320122210112100002
Q gi|254780432|r 231 YEWAN--VKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKIL 308 (392)
Q Consensus 231 ~e~~g--i~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l 308 (392)
+|||| |+|||+|++|+||||+|+||+++++++.+.+.++.|||||+||||+|+||++||++|+++.++++++++|++|
T Consensus 240 ~~Hygse~~PDi~T~AKgLGgG~PiGA~~~~e~~a~~~~~G~HGsTFGGNPLAc~Aa~~vl~~i~~~~~l~~v~~~G~~f 319 (402)
T TIGR00707 240 YEHYGSEVEPDIITLAKGLGGGVPIGAVLAKEEVAEALTPGDHGSTFGGNPLACAAALAVLEVIEKERLLEKVKEKGDYF 319 (402)
T ss_pred HHCCCCCCCCHHHHHHHHHHCCCHHHHHEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 12068845523875405552782022320236787315898986667873899999877666550510478999988999
Q ss_pred HHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH---HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 688999988679707550464009998724998---99999999689899626898899558986889999999999999
Q gi|254780432|r 309 FEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP---ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 309 ~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~---~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
+++|+++..++.+.|++|||+|||+|+|+..++ ..+.+.++++|+|+.++++++|||.|||+|++++|++++++|++
T Consensus 320 ~~~L~~~~~~~~~l~k~VRG~GLmlG~e~~~~~~~a~~~~~~a~~~GlLv~~Ag~~v~Rf~PPL~i~~e~i~~~~~~l~~ 399 (402)
T TIGR00707 320 KERLEELIKKYIDLIKEVRGKGLMLGIELEAPSVAAKDIVKEAREKGLLVNTAGPKVLRFVPPLIITEEEIDEAVDALEE 399 (402)
T ss_pred HHHHHHHCCCCCCCEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 99999861776674015323123465564278655899999998489268817887066157864458899999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780432|r 386 TAI 388 (392)
Q Consensus 386 al~ 388 (392)
+|.
T Consensus 400 ~~~ 402 (402)
T TIGR00707 400 AIE 402 (402)
T ss_pred HHC
T ss_conf 829
No 2
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=100.00 E-value=0 Score=862.14 Aligned_cols=386 Identities=35% Similarity=0.643 Sum_probs=371.7
Q ss_pred CCCCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 84314515588887489850103799679976464102267435787899999999999973145068757818999998
Q gi|254780432|r 2 NKNDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFAN 81 (392)
Q Consensus 2 ~~~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~ 81 (392)
+|++|-+|+|+|.||+|.||+|.||||.+|++|+||.|+|+++|.|||||.|++|+++|+++++.++..|+++....++|
T Consensus 12 ~~~~YgAhnYhPLPV~~~~g~G~~v~D~eG~~Y~D~LSaYSavNqGHchP~i~~Al~~Q~~KlTL~Sraf~nd~lg~~~~ 91 (426)
T TIGR01885 12 RESKYGAHNYHPLPVVLQRGKGAYVWDPEGREYLDFLSAYSAVNQGHCHPKIVNALKNQADKLTLTSRAFHNDVLGEFAK 91 (426)
T ss_pred HCCCCCCCCCCCHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHH
T ss_conf 10234677888247887506830898148888641002554401376771689999999851371027660603578999
Q ss_pred HHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 6520101--3331235655540356777665432001347--86002343546565432123455321-13479998643
Q gi|254780432|r 82 HLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKT--NKFRIVTFEGAFHGRTLATISAGGKL-QYLEGFGPKIE 156 (392)
Q Consensus 82 ~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t--~r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~p~~~ 156 (392)
.+.+.++ +++|+++|||+||+|+|+|+||+|.+..+.- ++-+||.-.|+|||||++|+|+|.+. .++++|+|++|
T Consensus 92 ~~t~LfgGk~~~vL~mNTGaEAvEtA~KLAR~WgY~~K~ip~~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflP 171 (426)
T TIGR01885 92 YLTKLFGGKYEKVLPMNTGAEAVETALKLARKWGYEVKGIPRNKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLP 171 (426)
T ss_pred HHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCC
T ss_conf 99975499510560456873479999999997441357855762389985388733035443202672120067879677
Q ss_pred ------CCCCCCCHHHHHHHHHC------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf ------33222100268875410------123322223332222112462101232211022345721310110034444
Q gi|254780432|r 157 ------GFDQAKFCDLQSLKNQI------SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 157 ------~~~~~~~~d~~~l~~~~------~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
+|.++||+|+|+|++.+ .|+|||||+||||||+|++.||++||.++|+||+|||+|||+||||||+||
T Consensus 172 nvasGhgf~~iPYgd~EAl~~aL~~P~~~GDnVAA~i~EPIQGEAGvvvPp~gYl~~V~~LC~~~nVLfI~DEiQTGlGR 251 (426)
T TIGR01885 172 NVASGHGFRKIPYGDLEALRKALQDPKKTGDNVAAFILEPIQGEAGVVVPPPGYLPGVRALCKEHNVLFIADEIQTGLGR 251 (426)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCH
T ss_conf 43357852115588878999997275778886899995040354436848963578999986551872898200038402
Q ss_pred CCCCCCCCCCC--CCCCEEECCCCCCCC-CCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 55531011124--545302103444444-3443210001112222233--223453211110012334554320122210
Q gi|254780432|r 225 TGKLFAYEWAN--VKPDIMTIAKGMGGG-FPIGACLATNEVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQSDGFLE 299 (392)
Q Consensus 225 tG~~f~~e~~g--i~PDi~~~gK~l~gG-~P~sav~~~~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~ 299 (392)
||+|||++|++ |+|||++|||+|+|| ||+|||+.++|||.++.|+ +|||||+||||+||+|.|+|++|++++|.+
T Consensus 252 TGk~la~dh~~aev~PDi~lLGKALsGGv~PiSa~la~~dim~vl~PGPF~HGSTfGGNPLAcavaiAaLeVL~~ekL~~ 331 (426)
T TIGR01885 252 TGKLLACDHENAEVKPDIVLLGKALSGGVYPISAVLADDDIMSVLKPGPFEHGSTFGGNPLACAVAIAALEVLEEEKLAE 331 (426)
T ss_pred HHHHHHHHCCCCEECCCCEEEEHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH
T ss_conf 54533101058820450335112345894622436664640121176486567768875789999999999874045068
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC------HHHHHHHHHHCCEEEEEC-CCCEEEECCCCCCC
Q ss_conf 11210000268899998867970755046400999872499------899999999689899626-89889955898688
Q gi|254780432|r 300 NVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS------PALLAAKFRDECLLTAPS-SDNVVRILPPLTIT 372 (392)
Q Consensus 300 ~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~------~~~~~~~l~~~Gll~~~~-~~~~irl~Ppl~it 372 (392)
|+.++|..|+++|++|..+.+++|.+|||+||+++||+..+ ...++.+|+++||++.++ ++.+|||+|||+||
T Consensus 332 ~A~~lG~~f~~~L~~l~~~S~dvv~EVRGkGLL~AIe~~~~ka~~~~~w~~Cl~~k~~GLlak~~nhd~~IR~aPPL~i~ 411 (426)
T TIGR01885 332 RADQLGDMFLDELKQLARESPDVVKEVRGKGLLIAIEFKENKADEIGAWDVCLRLKENGLLAKPTNHDKIIRLAPPLVIT 411 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEECCCCCCCEEEECCCCCCC
T ss_conf 89883289999999887507640001156721688885065333264668878852074210133587068717885263
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780432|r 373 AEEIHEGLERIERTA 387 (392)
Q Consensus 373 ~~eid~~i~~l~~al 387 (392)
+||++..++++.+++
T Consensus 412 ~E~L~~~ie~i~K~~ 426 (426)
T TIGR01885 412 KEQLDEVIEIIRKTL 426 (426)
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 899999999986049
No 3
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=0 Score=842.97 Aligned_cols=385 Identities=50% Similarity=0.852 Sum_probs=374.7
Q ss_pred CCCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 43145155888874898501037996799764641022674357878999999999999731450687578189999986
Q gi|254780432|r 3 KNDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANH 82 (392)
Q Consensus 3 ~~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~ 82 (392)
+++|++++|.+.|++++||+|+|+||.+||+||||.+|+++++|||+||+|++|+++|+++++|+++.|.++.+.+|+++
T Consensus 13 ~~~~~~~~Y~~~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~ 92 (404)
T COG4992 13 FMKYLMPTYGRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEK 92 (404)
T ss_pred HHHHHHCCCCCCCEEEEECCCCEEECCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 88765200576862478546257987998876660355111025778989999999999776211313378699999999
Q ss_pred HHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 520101-3331235655540356777665432001347860023435465654321234553211347999864333222
Q gi|254780432|r 83 LIHSTF-ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQA 161 (392)
Q Consensus 83 L~~~~~-~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~ 161 (392)
|++.++ +|||||+|||+||||+|+|+||+|.. .++|.+||+|++||||||++++|+|++++|+++|.|++++|.++
T Consensus 93 L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~---~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~v 169 (404)
T COG4992 93 LVELSPFADRVFFCNSGAEANEAALKLARKYTG---DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHV 169 (404)
T ss_pred HHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCC---CCCCCEEEEECCCCCCCCCEEEECCCCHHHCCCCCCCCCCCEEC
T ss_conf 996286666899757838999999999999708---88875799974775776623366568842226788999995361
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 10026887541012332222333222211246210123221102234572131011003444455531011124545302
Q gi|254780432|r 162 KFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM 241 (392)
Q Consensus 162 ~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~ 241 (392)
||||++++++.+.+++||||+|||||+||+++||++||+++|++|++||+|||+||||||+||||+|||+||+||+|||+
T Consensus 170 pfnDi~al~~ai~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~ 249 (404)
T COG4992 170 PFNDIEALEAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDIL 249 (404)
T ss_pred CCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEE
T ss_conf 78998999987365758999826668889877998999999999987192999964313888663178989748887778
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCC
Q ss_conf 10344444434432100011122222332234532111100123345543201222101121000026889999886797
Q gi|254780432|r 242 TIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPN 321 (392)
Q Consensus 242 ~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~ 321 (392)
|++|+||||+|+||+++++++++.+.++.|+|||+|||++||++.++|+++.++++++|++++|++|+++|+++..+||
T Consensus 250 tlaK~LgGG~PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~- 328 (404)
T COG4992 250 TLAKALGGGFPIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYP- 328 (404)
T ss_pred EEECCCCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_conf 8601245883323557742666247887656777867999999999999980030899999999999999999751277-
Q ss_pred EEEEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 0755046400999872499--899999999689899626898899558986889999999999999999852
Q gi|254780432|r 322 MFLEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 322 ~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
++.+|||+|||+|+|+..+ ...+.+.++++|+++..+++|+|||.|||+||++|||+++++|++++..+.
T Consensus 329 ~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~~l~~al~~~~ 400 (404)
T COG4992 329 LVKEVRGRGLMIGIELKEPYRARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDALERALAAAS 400 (404)
T ss_pred CEEEEECCEEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 212242150499999447645799999999789699607888488458752889999999999999999654
No 4
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=0 Score=829.20 Aligned_cols=387 Identities=48% Similarity=0.804 Sum_probs=377.8
Q ss_pred CCCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 43145155888874898501037996799764641022674357878999999999999731450687578189999986
Q gi|254780432|r 3 KNDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANH 82 (392)
Q Consensus 3 ~~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~ 82 (392)
|++|++|+|.|+|++|+||+|+||||.|||+||||+||+|++++||+||+|.+|+++|++++.|+++.|.++...+|+++
T Consensus 10 d~~~~~~~y~~~P~~i~ra~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~lae~ 89 (398)
T PRK02627 10 EDKYLMNTYGRLPIAFVRGEGCWLWDDDGKEYLDFLAGIAVNSLGHAHPKLVEAIQEQAAKLIHTSNLYYIPPQEELAEK 89 (398)
T ss_pred HHHHCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 98516888899985189976288996988999986717874942789899999999999856786665467089999999
Q ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 52010133312356555403567776654320013478600234354656543212345532113479998643332221
Q gi|254780432|r 83 LIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAK 162 (392)
Q Consensus 83 L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~ 162 (392)
|++..++++|+|++|||||||+|||+||+|+..++.|+|++||+|++||||+|++++|+|+++.++++|.|.++++.++|
T Consensus 90 L~~~~~~~~v~f~~sGseAvE~AiKlAr~y~~~~~~~~r~~ii~~~~syHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~p 169 (398)
T PRK02627 90 LVELSGMDKVFFCNSGAEANEAAIKLARKYGHTKGGIEKPEIITAENSFHGRTLATLSATGQPKYQKGFEPLVPGFIYVP 169 (398)
T ss_pred HHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
T ss_conf 97524998799828779999999999999988647888867999537869997510013788222367678888805624
Q ss_pred CHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 00268875410-12332222333222211246210123221102234572131011003444455531011124545302
Q gi|254780432|r 163 FCDLQSLKNQI-SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM 241 (392)
Q Consensus 163 ~~d~~~l~~~~-~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~ 241 (392)
|+|++++++.+ .++|||||+|||||++|+++||++||+++|++|++||++||+|||||||||||+||++|++|++|||+
T Consensus 170 ~~d~~~l~~~~~~~~iAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv 249 (398)
T PRK02627 170 FNDIEALEAAINNPRTAAVLLEPIQGEGGVNPADKEYLQALRELCDENNILLILDEVQTGMGRTGKLFAYQHYGIEPDIM 249 (398)
T ss_pred CCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCCEE
T ss_conf 77299999984589879999827888889865888899999999865074077530001778556510433269788857
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCC
Q ss_conf 10344444434432100011122222332234532111100123345543201222101121000026889999886797
Q gi|254780432|r 242 TIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPN 321 (392)
Q Consensus 242 ~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~ 321 (392)
|+||+|+||+|+|||++++++++.+.++.|++||+|||++||||+++|++++++++++|++++|++|.++|+++.++||
T Consensus 250 ~~gKgl~gG~Plsav~~~~~i~~~~~~g~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~- 328 (398)
T PRK02627 250 TLAKGLGGGVPIGAVLAKGKAADVFTPGDHGSTFGGNPLACAAALAVLDIIEEEGLLENAAERGEYLRAGLRELLEKYP- 328 (398)
T ss_pred EECCCCCCCCCCCCEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_conf 7600024889871243169999636799878889999899999999999998648999999999999999999997199-
Q ss_pred EEEEECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 075504640099987249989999999968989962689889955898688999999999999999985
Q gi|254780432|r 322 MFLEVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 322 ~v~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.+.+|||.|||+++|+..+...+.+.++++|+++.+.++|+|||.|||+||++|||+++++|+++|.+|
T Consensus 329 ~v~~vRG~Gl~~giel~~~~~~~~~~~~~~Gll~~~~g~~~ir~~PPL~it~~eid~~~~~l~~al~ev 397 (398)
T PRK02627 329 IIKEVRGLGLMIGIELKRPAKELVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDELVDRLDEVLKEL 397 (398)
T ss_pred CEEEEEECCEEEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 836773225799999678799999999978978950799989998892089999999999999999986
No 5
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=0 Score=807.55 Aligned_cols=387 Identities=43% Similarity=0.722 Sum_probs=374.3
Q ss_pred CCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 31451558888748985010379967997646410226743578789999999999997314506875781899999865
Q gi|254780432|r 4 NDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHL 83 (392)
Q Consensus 4 ~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L 83 (392)
++|++++|+|+|++++||+|+||||.|||+||||.+|+|+++|||+||+|++|+++|++++.++.+.+.++...+|+++|
T Consensus 11 ~~~~~~~y~p~P~vi~ra~G~~l~D~dG~~yLD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~la~~L 90 (406)
T PRK12381 11 DEWMVPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKL 90 (406)
T ss_pred HHHCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 96324779999833898453989979989999916088745238998999999999986556677873688999999998
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20101333123565554035677766543200134786002343546565432123455321134799986433322210
Q gi|254780432|r 84 IHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKF 163 (392)
Q Consensus 84 ~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~ 163 (392)
++..+.+||+|++|||||||+|||+||+|+..++.|+|++||+|+++|||+|.+++|+++.+.++..|.|.++++.+.++
T Consensus 91 ~~~~~~~~v~f~~SGsEAve~AiKlAr~~~~~~~~~~r~~Ii~~~~~yHG~t~~~~s~~g~~~~~~~~~p~~~~~~~~~~ 170 (406)
T PRK12381 91 IDATFADRVFFCNSGAEANEAALKLARKYAHDRYGNHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY 170 (406)
T ss_pred HHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 73058764999487778999999999999986389998769996787678832232157873335677889974435652
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 02688754101233222233322221124621012322110223457213101100344445553101112454530210
Q gi|254780432|r 164 CDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTI 243 (392)
Q Consensus 164 ~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~ 243 (392)
+|++++++.+.+++||||+|||||++|+++||++||++||++|++||++||+|||||||||||+||++|++|++|||+|+
T Consensus 171 ~d~~~~~~~~~~~~aAvivEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~~~~gv~PDiv~~ 250 (406)
T PRK12381 171 NDLNSASALIDDQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTT 250 (406)
T ss_pred CHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHEECCCCEEECCCCEECCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 22999999738883599990645668832689899999997521158379744420077766676535466789988997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEE
Q ss_conf 34444443443210001112222233223453211110012334554320122210112100002688999988679707
Q gi|254780432|r 244 AKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMF 323 (392)
Q Consensus 244 gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v 323 (392)
||+||||||+|||++++++++.+.++.|++||+|||++||||+++|++++++++++|++++|++|.++|+++.++|+ ++
T Consensus 251 gK~lggG~P~sav~~~~~i~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i 329 (406)
T PRK12381 251 AKALGGGFPIGAMLTTEKYASVMTVGTHGTTYGGNPLASAVAGKVLDLINTPEMLNGVKQRHDWFVERLNTINARYG-LF 329 (406)
T ss_pred CCCCCCCCEEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC-CE
T ss_conf 42024886048998728878652888766389869999999999999997556999999999999999999887389-88
Q ss_pred EEECCCEEEEEEEECCC----HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 55046400999872499----899999999689899626898899558986889999999999999999852
Q gi|254780432|r 324 LEVRGQGLLIGLKTVFS----PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 324 ~~vRG~Gl~~~ie~~~~----~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
.+|||+|||+++|++.+ ...+.+.++++|+++...++|+|||+|||+||++|||+++++|++++.++.
T Consensus 330 ~dVRG~GLm~giel~~~~~~~~~~l~~~~~~~Gll~~~~g~n~irl~PPL~it~~eid~~l~~l~~al~~v~ 401 (406)
T PRK12381 330 SEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNVSEEEIATGLDRFARACERFV 401 (406)
T ss_pred EEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 863025269999964887535999999999799699607999699979953899999999999999999999
No 6
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=0 Score=808.41 Aligned_cols=387 Identities=45% Similarity=0.763 Sum_probs=374.0
Q ss_pred CCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 31451558888748985010379967997646410226743578789999999999997314506875781899999865
Q gi|254780432|r 4 NDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHL 83 (392)
Q Consensus 4 ~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L 83 (392)
++|++++|+|+|++|+||+|+|+||.|||+||||.||+|++||||+||+|.+|+++|++++.|....+.++...+|+++|
T Consensus 12 ~~~~~~~y~p~pivi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~I~~Ai~~Q~~~l~~~~~~~~~~~~~~lae~L 91 (403)
T PRK05093 12 DEVMVPNYAPAAFIPVRGEGSRVWDQQGREYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKL 91 (403)
T ss_pred HHHCCCCCCCCCCCEEEEECCEEEECCCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 86305879999830898562989979979999955088850328997999999999987557775741488999999998
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20101333123565554035677766543200134786002343546565432123455321134799986433322210
Q gi|254780432|r 84 IHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKF 163 (392)
Q Consensus 84 ~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~ 163 (392)
++..+.|||+|++|||||||+|||+||+|+..++.++|++||+|+++|||+|++++++++.+.++.+|+|.++++.++||
T Consensus 92 ~~~~~~drv~f~~SGSEAvE~AiklAr~~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~~g~~~~~~~~~p~~~~~~~~p~ 171 (403)
T PRK05093 92 VDATFAERVFFANSGAEANEAALKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF 171 (403)
T ss_pred HHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCEECCC
T ss_conf 64168775998386778999999999999997289987547777588688836877625880110277899977565563
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 02688754101233222233322221124621012322110223457213101100344445553101112454530210
Q gi|254780432|r 164 CDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTI 243 (392)
Q Consensus 164 ~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~ 243 (392)
+|++++++.+.+++||||+|||||++|+++||++||++||++|++||++||+|||||||||||+||++|+|||+|||+|+
T Consensus 172 ~d~~~l~~~~~~~iaAviiEPi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~ 251 (403)
T PRK05093 172 NDLAALKAVIDDKTCAVVVEPIQGEGGVIPATPEFLQGLRELCDKHNALLIFDEVQTGMGRTGDLYAYMHYGVTPDILTS 251 (403)
T ss_pred CCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 36888860337744799995766789975899999999998630168379860134268877775222368989988997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEE
Q ss_conf 34444443443210001112222233223453211110012334554320122210112100002688999988679707
Q gi|254780432|r 244 AKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMF 323 (392)
Q Consensus 244 gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v 323 (392)
||+||||||+|||+++++|++.+.++.|++||+|||++|+||+++|++++++++++|++++|++|.++|+++.++|+ .+
T Consensus 252 gKglggG~Plsav~~~~~i~~~~~~~~~g~T~~g~pla~aaala~L~~i~~~~l~~~a~~~G~~l~~~L~~l~~~~~-~i 330 (403)
T PRK05093 252 AKALGGGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKAREQRFVDGLQKINEKYG-VF 330 (403)
T ss_pred CCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC-CE
T ss_conf 30015886427998728878650787726589858999999999999996344999999999999999999986289-82
Q ss_pred EEECCCEEEEEEEECCC----HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 55046400999872499----899999999689899626898899558986889999999999999999852
Q gi|254780432|r 324 LEVRGQGLLIGLKTVFS----PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 324 ~~vRG~Gl~~~ie~~~~----~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
.+|||+|||+++|+..+ ...+...++++|+++.+.++|+|||.|||+||++|||+++++|++++.++.
T Consensus 331 ~~VRG~Glm~giel~~~~~~~a~~i~~~~~~~Gll~~~~g~n~irl~PPL~it~~eid~~l~~l~~al~eV~ 402 (403)
T PRK05093 331 SEIRGKGLLIGAELNEQYKGRARDFLYAAAEEGVMVLVAGPDVLRFAPSLVIPDADIDEGLARFEKAVAKVV 402 (403)
T ss_pred EEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 666541269999965875216999999999689289527999799978844899999999999999999985
No 7
>PRK01278 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=0 Score=808.02 Aligned_cols=384 Identities=62% Similarity=1.060 Sum_probs=376.0
Q ss_pred ECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 51558888748985010379967997646410226743578789999999999997314506875781899999865201
Q gi|254780432|r 7 LFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHS 86 (392)
Q Consensus 7 ~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~ 86 (392)
++++|+|+|++|+||+|+||||.|||+||||.+|+|+++|||+||+|++|+++|+++++|+++.|.++..++|+++|++.
T Consensus 6 ~~~~y~~~Pi~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~l~~~~~~~~~~~~~~la~~L~~~ 85 (389)
T PRK01278 6 LLPVYNRADLRFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVEN 85 (389)
T ss_pred CCCCCCCCCCCEEEEECCEEEECCCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 43558999977799765999979989999936098861228997899999999986566765653687999999997533
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 01333123565554035677766543200134786002343546565432123455321134799986433322210026
Q gi|254780432|r 87 TFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDL 166 (392)
Q Consensus 87 ~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~ 166 (392)
.+.|+|+|++|||||||+|||+||+|+..+|.|+|++||+|+++|||+|.+++|+++++.++++|+|..+++.+++++|+
T Consensus 86 ~~~d~v~f~~sGsEAve~AlklAr~~~~~~g~t~r~~ii~~~~~yHG~t~~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~ 165 (389)
T PRK01278 86 SFADKVFFTNSGAEAVECAIKTARRYQYGKGHPERYRIITFEGAFHGRTLATIAATGQEKYLEGFGPLVDGFDQVPFGDI 165 (389)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCH
T ss_conf 67687999687489999999999998885399997289998888886763511357884433666899888246778978
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 88754101233222233322221124621012322110223457213101100344445553101112454530210344
Q gi|254780432|r 167 QSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKG 246 (392)
Q Consensus 167 ~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~ 246 (392)
+++++.+.+++||||+|||||++|+++||++||+++|++|++||++||+|||||||||||+||++|++||+|||+|+||+
T Consensus 166 ~~l~~~~~~~iAaviiEPi~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~ 245 (389)
T PRK01278 166 EALKAAITPNTAAILIEPIQGEGGIRPLPDEFLKGLRQLCDENGLLLIFDEVQCGVGRTGKLFAHEWAGVTPDIMALAKG 245 (389)
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHCCCCCCCEEEECCC
T ss_conf 99998628881799996888888960699999999999998606538742100077755664220036768986787012
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf 44443443210001112222233223453211110012334554320122210112100002688999988679707550
Q gi|254780432|r 247 MGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEV 326 (392)
Q Consensus 247 l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v 326 (392)
|+||||+|||++++++++.+.++.|++||+|||++|+||+++|++++++++++|++++|++|.++|+++.++||+++.+|
T Consensus 246 l~gG~P~sav~~~~ei~~~~~~g~~~~T~~gnp~~~aaala~L~~i~~~~l~~~v~~~G~~l~~~L~~l~~~~p~~i~~v 325 (389)
T PRK01278 246 IGGGFPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVVLAPGFLDNVQKMGLYLKQKLESLVDRFPDVIEEV 325 (389)
T ss_pred CCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 46887427998638878543688767799979999999999999998646999999999999999999987686713556
Q ss_pred CCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 4640099987249989999999968989962689889955898688999999999999999985
Q gi|254780432|r 327 RGQGLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 327 RG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
||.|||+++|+..++..+..+++++|+++.+.++|+|||+|||+||++|||+++++|++++.+|
T Consensus 326 RG~Gl~~gie~~~~~~~i~~~~~~~Gll~~~~g~~~lr~~PpL~it~~ei~~~~~~l~~al~~v 389 (389)
T PRK01278 326 RGEGLMLGLKCVVPSRDLVAALRDEGLLTVPAGDNVVRLLPPLIITEEEIDEALERLERAAESL 389 (389)
T ss_pred EEEEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 4503699999458899999999979938972799979997881398999999999999999759
No 8
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=0 Score=798.09 Aligned_cols=386 Identities=45% Similarity=0.768 Sum_probs=373.3
Q ss_pred CCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 31451558888748985010379967997646410226743578789999999999997314506875781899999865
Q gi|254780432|r 4 NDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHL 83 (392)
Q Consensus 4 ~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L 83 (392)
++|++++|+|+|++|+||+|+||||.|||+||||.+|+|++++||+||+|++|+++|++++++.++.+.++...+|+++|
T Consensus 7 ~~~~~~~y~~~P~vi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~la~~L 86 (397)
T TIGR03246 7 DQVMVPNYAPAPFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKL 86 (397)
T ss_pred HHHCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 77442669999842898364999969879999946348766557898899999999996577776863488999999999
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20101333123565554035677766543200134786002343546565432123455321134799986433322210
Q gi|254780432|r 84 IHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKF 163 (392)
Q Consensus 84 ~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~ 163 (392)
++..+.++|+|++|||||||+|||+||+|+..++.++|++||+|+++|||+|.+++++++++.++.++.|.+.++.++|+
T Consensus 87 ~~~~~~~~v~f~~sGsEA~e~AlklAr~~~~~~~~~~k~~iis~~~~yHG~t~~~~s~~~~~~~~~~~~p~~~~~~~~~~ 166 (397)
T TIGR03246 87 VDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY 166 (397)
T ss_pred HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
T ss_conf 75148776997286778999999999999985179997689997278689856410468996556788899976420452
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 02688754101233222233322221124621012322110223457213101100344445553101112454530210
Q gi|254780432|r 164 CDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTI 243 (392)
Q Consensus 164 ~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~ 243 (392)
+|++.+++.+.+++||||+|||||++|+++||++||+++|++|++||++||+|||||||||||+||++|+|||+|||+|+
T Consensus 167 ~d~~~~~~~~~~~iaAvi~EPv~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~ 246 (397)
T TIGR03246 167 NDLAAAKALISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTS 246 (397)
T ss_pred CCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEECCCCCCCCCHHHCCCCCCCEEEE
T ss_conf 33999998528873799993877888987388899999999999859358634122078777783143226989987887
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEE
Q ss_conf 34444443443210001112222233223453211110012334554320122210112100002688999988679707
Q gi|254780432|r 244 AKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMF 323 (392)
Q Consensus 244 gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v 323 (392)
||+|+||||+|||++++++++.+.++.|++||+|||++|+||+++|++|+++++++|++++|++|.++|+++.++| +++
T Consensus 247 gK~l~gG~P~sav~~~~~i~~~~~~~~h~~T~~gnpl~~aaala~L~~i~~e~l~~~~~~~g~~l~~~L~~l~~~~-~~i 325 (397)
T TIGR03246 247 AKALGGGFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARY-NVF 325 (397)
T ss_pred CCCCCCCCEEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC-CCE
T ss_conf 4224688404899744888865187773866882999999999999999854799999999999999999987417-987
Q ss_pred EEECCCEEEEEEEECCC----HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 55046400999872499----89999999968989962689889955898688999999999999999985
Q gi|254780432|r 324 LEVRGQGLLIGLKTVFS----PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 324 ~~vRG~Gl~~~ie~~~~----~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.+|||.|||+++|++.+ ...+...++++|+++...++|+|||.|||+||++|||+++++|++++.+|
T Consensus 326 ~~VRG~Glm~giel~~~~~~~a~~i~~~~~~~Gll~~~~g~n~lrl~PPL~it~eeid~~l~~l~~al~~v 396 (397)
T TIGR03246 326 SEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred EEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 75422435999997278633599999999978928930799979997885189999999999999999986
No 9
>PTZ00125 ornithine aminotransferase; Provisional
Probab=100.00 E-value=0 Score=789.34 Aligned_cols=387 Identities=35% Similarity=0.606 Sum_probs=361.6
Q ss_pred CCCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 43145155888874898501037996799764641022674357878999999999999731450687578189999986
Q gi|254780432|r 3 KNDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANH 82 (392)
Q Consensus 3 ~~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~ 82 (392)
|++|++|+|.|+|++|+||+|+|+||.|||+||||.||+|+++|||+||+|++|+++|++++.+.+..+.++...++++.
T Consensus 20 ~~~~~~~~y~~~P~vi~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~a~~~ 99 (415)
T PTZ00125 20 EDNYGAHNYHPIPVVFKKGKGVFVWDVEGKKYFDFLSAYSAVNQGHCHPKILEALINQAKKLTLSSRAFYNQKLGEAEKY 99 (415)
T ss_pred HHHHCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 98718888899896189856498996988998782406886344279799999999999657877675345899999999
Q ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 520101333123565554035677766543200134--786002343546565432123455321134799986433322
Q gi|254780432|r 83 LIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGK--TNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQ 160 (392)
Q Consensus 83 L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~--t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~ 160 (392)
+....+++||+|++|||||||+|+|+||+|+...++ ++|.+||+|+++|||+|.+++++++++.++..|+|..+++..
T Consensus 100 l~~~~g~~~v~f~~SGsEA~e~AiklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~ 179 (415)
T PTZ00125 100 ITNLFGYDKVLFMNTGAEANETAVKFARRWGYAVKGIPENQAKIIFCNGNFSGRTMGAISASDDPKSYNKFGPFVPGFHK 179 (415)
T ss_pred HHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 98554998899538758899999999989877416777896059997388688844543344574334577888897077
Q ss_pred CCCHHHHHHHHHC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2100268875410--12332222333222211246210123221102234572131011003444455531011124545
Q gi|254780432|r 161 AKFCDLQSLKNQI--SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKP 238 (392)
Q Consensus 161 ~~~~d~~~l~~~~--~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~P 238 (392)
+||+|++++++.+ .+++||||+|||||++|+++||++||++||++|++||++||+|||||||||||+||++|++|++|
T Consensus 180 ~p~~d~~~l~~~~~~~~~iAAviiEPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~P 259 (415)
T PTZ00125 180 VDYNDLEALEKLLSKDPNVCAFIVEPIQGEAGVIVPDEGYLKQVYSLCKKYNVLLVADEVQTGLGRTGKLLAVDHEGVKP 259 (415)
T ss_pred CCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEECCCCCCCCCCCCCCCCCC
T ss_conf 04676899999960499768999746568788426999999999999998487676452241677567621201789799
Q ss_pred CEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH
Q ss_conf 3021034444443-443210001112222233223453211110012334554320122210112100002688999988
Q gi|254780432|r 239 DIMTIAKGMGGGF-PIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKN 317 (392)
Q Consensus 239 Di~~~gK~l~gG~-P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~ 317 (392)
||+|+||+||||| |+|||++++++++.+.++.|++||+|||++||||+++|++++++++++|++++|++|+++|++|.
T Consensus 260 Div~~gKgl~gG~~Plsav~~~~~i~~~~~~~~h~~T~~gnpla~Aaa~a~L~~i~~~~l~~~v~~~G~~l~~~L~~L~- 338 (415)
T PTZ00125 260 DIVLLGKALSGGHLPISAVLANDDVMLTIKPGEHGSTYGGNPLAAAVCKEALEVLSEEKLAENAQKLGKYFRKGLKKLK- 338 (415)
T ss_pred CEEEECCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-
T ss_conf 8210031446887762035334999963268998889981899999999999999864699999999999999999874-
Q ss_pred HCCCEEEEECCCEEEEEEEECCCH----HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 679707550464009998724998----99999999689899626898899558986889999999999999999852
Q gi|254780432|r 318 RFPNMFLEVRGQGLLIGLKTVFSP----ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 318 ~~~~~v~~vRG~Gl~~~ie~~~~~----~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+|| .+.+|||+|||++||+..+. ..+..+++++|+++.+.++|+|||+|||+||++|||+++++|+++|++|+
T Consensus 339 ~~p-~v~~VRG~Gl~~giel~~~~~~~~~~i~~~~~~~Gll~~~~g~~vir~~PPL~it~~eid~~l~~l~~aL~~l~ 415 (415)
T PTZ00125 339 KSP-IVEIVRGKGLLNAIQFDPNVSNVAWDICLKFKENGLLCKPTHDDIIRLTPPLTITKEQLDQCLLIIKKVLKSFN 415 (415)
T ss_pred CCC-CEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 699-76987007819999985797658999999999599699607999899989933899999999999999999619
No 10
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=0 Score=789.46 Aligned_cols=383 Identities=38% Similarity=0.661 Sum_probs=367.2
Q ss_pred CCCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 43145155888874898501037996799764641022674357878999999999999731450687578189999986
Q gi|254780432|r 3 KNDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANH 82 (392)
Q Consensus 3 ~~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~ 82 (392)
|++|++|+|.|+|++|+||+|+||||.|||+||||+||+|++++||+||+|++|+++|++++++.+..+.++...+++++
T Consensus 11 ~~~y~~~~y~~~P~~i~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~e~ 90 (396)
T PRK04073 11 TNHYGAHNYHPLPIVISEAEGVWVKDPEGNKYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEK 90 (396)
T ss_pred HHHHCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 87626788899996289736599998989999994517887630379799999999998417876653243478999999
Q ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 5201013331235655540356777665432001--34786002343546565432123455321134799986433322
Q gi|254780432|r 83 LIHSTFADRVFFTNSGAESVECAIKTARRYHYMA--GKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQ 160 (392)
Q Consensus 83 L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~--g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~ 160 (392)
+++..+.++++|+||||||||+|+|+||+|.+.. ..++|++||+|+++|||+|++++|+++++.++++|+|..+++..
T Consensus 91 l~~l~~~~~v~f~~sGseAvE~AlklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~p~~~~~~~ 170 (396)
T PRK04073 91 VAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEAEYKRGFGPMLPGIKK 170 (396)
T ss_pred HHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEE
T ss_conf 99752836489618788899999999999987623788898779997775004532052226764334577899998232
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 21002688754101233222233322221124621012322110223457213101100344445553101112454530
Q gi|254780432|r 161 AKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDI 240 (392)
Q Consensus 161 ~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi 240 (392)
+||+|++++++.+.+++||||+|||||++|+++||++||+++|++|++||++||+|||||||||||+||++|++||+|||
T Consensus 171 ~p~~d~~~l~~~~~~~~AAvi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDi 250 (396)
T PRK04073 171 IPYGDVEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVKPDM 250 (396)
T ss_pred CCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEECCCCCCCCCCEECCCCCCCE
T ss_conf 57521667886148975699998987778977899899999999999839935266341078865763001004689880
Q ss_pred EECCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHC
Q ss_conf 2103444444-344321000111222223322345321111001233455432012221011210000268899998867
Q gi|254780432|r 241 MTIAKGMGGG-FPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRF 319 (392)
Q Consensus 241 ~~~gK~l~gG-~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~ 319 (392)
+|+||+|+|| +|+|||++++++++.+.++.|++||+|||++||||+++|++++++++++|++++|++|+++|+++ ++
T Consensus 251 v~~gK~l~gG~~P~~av~~~~~i~~~~~~~~h~~T~~gnpla~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l--~~ 328 (396)
T PRK04073 251 YILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALDVIEEEKLPERSLELGEYFKEQLKEI--DN 328 (396)
T ss_pred EECCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC--CC
T ss_conf 1025345578776058960789996166899760548898999999999999987579999999999999999825--89
Q ss_pred CCEEEEECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 970755046400999872499899999999689899626898899558986889999999999999999
Q gi|254780432|r 320 PNMFLEVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 320 ~~~v~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
| .|.+|||+|||+++|+..+...+.++++++|+++.+.++|+|||+|||+||++|||+++++|+++|.
T Consensus 329 ~-~i~~vRG~Gl~~giel~~~~~~~~~~~~~~Gll~~~~~~~~ir~~PpL~it~~eid~~l~~l~~~L~ 396 (396)
T PRK04073 329 P-MIKEVRGRGLFIGVELNEPARPYCEALKEEGLLCKETHETVIRFAPPLVISKEELDWALEKIKAVLS 396 (396)
T ss_pred C-CEEECCCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 9-7487233779999995875899999999499799527999899979936899999999999999859
No 11
>PRK04612 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=0 Score=785.97 Aligned_cols=386 Identities=40% Similarity=0.700 Sum_probs=367.1
Q ss_pred CCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 31451558888748985010379967997646410226743578789999999999997314506875781899999865
Q gi|254780432|r 4 NDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHL 83 (392)
Q Consensus 4 ~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L 83 (392)
++|.+++|+|+|++|+||+|+||||.|||+||||.||+|++++||+||+|++|+++|+++++|+++.+.++...+|+++|
T Consensus 12 ~~~~~~~y~p~pivi~r~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Ai~~Q~~~l~~~~~~~~~~~~~~lae~L 91 (408)
T PRK04612 12 AHYYLPVYRPRQVVLERGQGSRVWDDQGREYLDLSSGIAVSGLGHNDPDLVAALTEQAGKLWHTSNVFFSAPPLKLAEEL 91 (408)
T ss_pred HHCCCCCCCCCCEEEEEEECCEEEECCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 87074657999716998563999969889999924507751225898999999999986525766752265899999999
Q ss_pred HHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20101-333123565554035677766543200134-7860023435465654321234553211347999864333222
Q gi|254780432|r 84 IHSTF-ADRVFFTNSGAESVECAIKTARRYHYMAGK-TNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQA 161 (392)
Q Consensus 84 ~~~~~-~~~v~f~~SGseA~e~Aiklar~~~~~~g~-t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~ 161 (392)
++..+ .++|+|++|||||||+|||+||+|+...|+ ++|++|++|+++|||+|.+++++++++.++.+|.|.+.++..+
T Consensus 92 ~~~~~~~~~v~f~~SGsEAvE~AlKlAr~y~~~~G~~~~k~~ii~~~~syHG~t~~als~t~~~~~~~~~~p~p~~~~~~ 171 (408)
T PRK04612 92 VTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLASVTATAQPKYQEGYEPLPGGFRYV 171 (408)
T ss_pred HHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEC
T ss_conf 72268876699718746899999999999987328877776999985852598767422567843346888998852543
Q ss_pred CCHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 100268875410-1233222233322221124621012322110223457213101100344445553101112454530
Q gi|254780432|r 162 KFCDLQSLKNQI-SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDI 240 (392)
Q Consensus 162 ~~~d~~~l~~~~-~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi 240 (392)
+++|++.+++.+ +++|||||+|||||++|+++||++||++||++||+||++||+|||||||||||+||+++++|++|||
T Consensus 172 ~~~d~~~le~~~~~~~iAAvivEPi~g~gG~~~~~~~yl~~l~~lc~~~gillI~DEV~TGfGRtG~~fa~~~~~v~PDi 251 (408)
T PRK04612 172 DFNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDI 251 (408)
T ss_pred CCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCE
T ss_conf 66749999971569978999997867888830689999999999997569469850122478867620355512899998
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCC
Q ss_conf 21034444443443210001112222233223453211110012334554320122210112100002688999988679
Q gi|254780432|r 241 MTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFP 320 (392)
Q Consensus 241 ~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 320 (392)
+|+||+||||||+|||++++++++.++.+.|++||+|||++|+||+++|++++++++++|++++|++|+++|+++.++|
T Consensus 252 i~~gKglg~G~Pl~av~~~~~i~~~~~~~~h~~T~~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~- 330 (408)
T PRK04612 252 VTLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEF- 330 (408)
T ss_pred EEEEHHHCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC-
T ss_conf 9972322388762899986888851468997888873599999999999999866699999999999999999987407-
Q ss_pred CEEEEECCCEEEEEEEECCC----HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 70755046400999872499----89999999968989962689889955898688999999999999999985
Q gi|254780432|r 321 NMFLEVRGQGLLIGLKTVFS----PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 321 ~~v~~vRG~Gl~~~ie~~~~----~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+++.+|||+|||+|+|+..+ ...+...++++|+++.+.++|+|||+|||+||++|||+++++|+++|.++
T Consensus 331 ~~i~~vRG~GLm~giel~~~~~~~~~~i~~~~~~~Gll~~~~g~~~irl~PPL~it~~eide~l~~l~~al~~~ 404 (408)
T PRK04612 331 GVFAQIRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRLALAAY 404 (408)
T ss_pred CCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 98883220446999995478862699999999978919931799979996883388999999999999999999
No 12
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=0 Score=788.62 Aligned_cols=376 Identities=43% Similarity=0.746 Sum_probs=366.0
Q ss_pred CEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 14515588887489850103799679976464102267435787899999999999973145068757818999998652
Q gi|254780432|r 5 DFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLI 84 (392)
Q Consensus 5 ~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~ 84 (392)
.+++++|+++|++|+||+|+|+||.|||+||||++|+|++++||+||+|++|+++|+++++++++.+.++.+.+++++|+
T Consensus 2 ~~~~~~y~~~Pi~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~la~~l~ 81 (377)
T PRK02936 2 SHLFQTYGRRPIEIVKGKGTKVIDNNGKQYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLT 81 (377)
T ss_pred CCCCCCCCCCCCCEEEEECCEEEECCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHH
T ss_conf 85446579999877984639999598799999662988601058979999999999865788662010489999999732
Q ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 01013331235655540356777665432001347860023435465654321234553211347999864333222100
Q gi|254780432|r 85 HSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFC 164 (392)
Q Consensus 85 ~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~ 164 (392)
+..+.++|+|++|||||||+|||+||+| |+|++||+|++||||+|.+++++|+++.++.+|.|..+++.++||+
T Consensus 82 ~~~~~~~v~f~~sGsEAve~AiklAr~~------tgr~~ii~~~~~yHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~p~~ 155 (377)
T PRK02936 82 ENSAGDLVFFCNSGAEANEAALKLARKH------TGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFLHVPFN 155 (377)
T ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHHH------CCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCC
T ss_conf 0688788999687778999999998875------5998799987855114432001058743345778999981446745
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 26887541012332222333222211246210123221102234572131011003444455531011124545302103
Q gi|254780432|r 165 DLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA 244 (392)
Q Consensus 165 d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g 244 (392)
|++++++.+.++|||||+|||||++|+++||++||+++|++|++||++||+|||||||||||+||++|+||++|||+|+|
T Consensus 156 d~~~l~~~~~~~iAavi~EPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~e~~gv~PDii~~g 235 (377)
T PRK02936 156 DIKALEEVMNEEVAAVMLEVVQGEGGVIPADLSFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLEPDIVTVA 235 (377)
T ss_pred CHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHCCCCCCEEEEE
T ss_conf 89999851689678999978767889768999999999999998298457122112776556720364449887678862
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEE
Q ss_conf 44444434432100011122222332234532111100123345543201222101121000026889999886797075
Q gi|254780432|r 245 KGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFL 324 (392)
Q Consensus 245 K~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~ 324 (392)
|+|+||+|+|||++++++++.+.++.|++||+|||++||||+++|++++++++++|++++|++|+++|+++.+++| .+.
T Consensus 236 K~l~~G~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~~~~~~~-~i~ 314 (377)
T PRK02936 236 KGLGNGIPVGAMIGKKELGSAFTAGSHGSTFGGNYLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELQHVE-CVK 314 (377)
T ss_pred HHHCCCCCCCCEECCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC-CEE
T ss_conf 0102789873330328776303789988889859999999999999985111999999999999999999843699-667
Q ss_pred EECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 504640099987249989999999968989962689889955898688999999999999999
Q gi|254780432|r 325 EVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 325 ~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
+|||+|||+++|+..+...+.+.++++|+++.+.++|+|||.|||+||++|||+++++|+++|
T Consensus 315 ~vRG~Gl~~gie~~~~~~~~~~~~~~~Gll~~~~g~~~ir~~PpL~it~~ei~~~l~~l~~aL 377 (377)
T PRK02936 315 NIRGKGLMIGIECTHEVAPFIEQLREEGLLVLQAGPNVIRLLPPLIVTKEELDQAVYMLKKVL 377 (377)
T ss_pred EEEECCEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 712556999999778599999999969929943689989996990288999999999999869
No 13
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=0 Score=778.64 Aligned_cols=384 Identities=33% Similarity=0.589 Sum_probs=364.3
Q ss_pred CCCCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 84314515588887489850103799679976464102267435787899999999999973145068757818999998
Q gi|254780432|r 2 NKNDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFAN 81 (392)
Q Consensus 2 ~~~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~ 81 (392)
.+++|.+++|.|+|++|+||+|+|+||.|||+||||++|+|++++||+||+|++|+++|++++++.+..+.++..+++++
T Consensus 14 ~~~~~~~~~y~p~Pivi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~l~~ 93 (404)
T PRK00854 14 TEQRLGAHNYKPLDVVLTRGEGVWVWDTDGRRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYE 93 (404)
T ss_pred HHHHHCCCCCCCCCEEEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 99874588889898479985759999799999988262999775427979999999999856786555426579999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 652010133312356555403567776654320013--478600234354656543212345532113479998643332
Q gi|254780432|r 82 HLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAG--KTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFD 159 (392)
Q Consensus 82 ~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g--~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~ 159 (392)
+|++..+.++++|+||||||||+|+|+||+|++... .++|++||+|+++|||+|++++++++++.++..++|..+++.
T Consensus 94 ~l~~~~~~~~v~f~~SGsEAve~AiklAr~~~~~~~g~~tgr~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~ 173 (404)
T PRK00854 94 ELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFAPGFR 173 (404)
T ss_pred HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 99740376848855877999999999999987650378789855999645667860135434677433568889999815
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22100268875410123322223332222112462101232211022345721310110034444555310111245453
Q gi|254780432|r 160 QAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD 239 (392)
Q Consensus 160 ~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD 239 (392)
.+||+|.++++..+.+++||||+|||||++|+++||++||++||++|++||++||+|||||||||||+||++|++||+||
T Consensus 174 ~~p~~d~~~l~~~~~~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PD 253 (404)
T PRK00854 174 VVPFGDAAALEAAITPNTVAFLIEPIQGEAGVIIPPAGYFRRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEAD 253 (404)
T ss_pred EECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
T ss_conf 50566689999863987489999177577896179989999999999970764457500017863557414554248979
Q ss_pred EEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHH
Q ss_conf 021034444443-4432100011122222332234532111100123345543201222101121000026889999886
Q gi|254780432|r 240 IMTIAKGMGGGF-PIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNR 318 (392)
Q Consensus 240 i~~~gK~l~gG~-P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~ 318 (392)
|+|+||+|+||| |+|+|++++++++.+.++.|++||+|||++||||+++|++++++++++|++++|++|+++|+++.
T Consensus 254 ii~~gKgl~gG~~Pl~av~~~~~i~~~~~~~~h~~T~~gnpla~aaa~a~l~~i~~e~l~~~~~~~g~~l~~~L~~l~-- 331 (404)
T PRK00854 254 VTLIGKALSGGFYPVSAVLSNSEVLGVLRPGQHGSTFGGNPLACAVARAALRVLVEEGMIENAAEQGAYFLEGLRAIR-- 331 (404)
T ss_pred EEEECCCCCCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC--
T ss_conf 897564445887653202047999950679887788898989999999999999865899999999999999998504--
Q ss_pred CCCEEEEECCCEEEEEEEECCCH---HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 79707550464009998724998---99999999689899626898899558986889999999999999999
Q gi|254780432|r 319 FPNMFLEVRGQGLLIGLKTVFSP---ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 319 ~~~~v~~vRG~Gl~~~ie~~~~~---~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
+ +++.+|||+|||+++|+..+. ..+.+.++++|+++.+.++|+|||.|||+||++|||+++++|+++|.
T Consensus 332 ~-~~i~~VRG~Glm~gve~~~~~~~~~~~~~~~~~~Gll~~~~~~~~ir~~PPL~it~~eid~~l~~l~~~La 403 (404)
T PRK00854 332 G-NIVREVRGRGLMLAVELEPEAGGARQYCEALKARGLLAKDTHDHTIRLAPPLVITREQVDWAVSQIAKVLA 403 (404)
T ss_pred C-CCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 8-97276644455999998556677999999999799598748999899979957899999999999999966
No 14
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=0 Score=775.94 Aligned_cols=378 Identities=39% Similarity=0.644 Sum_probs=361.7
Q ss_pred CCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 31451558888748985010379967997646410226743578789999999999997314506875781899999865
Q gi|254780432|r 4 NDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHL 83 (392)
Q Consensus 4 ~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L 83 (392)
.+|++++|.++|++|+||+|+||||.|||+||||++|+|+++|||+||+|++|+++|++++.++++.|.++...++|++|
T Consensus 15 ~~~~~~~y~~~Pi~i~~a~G~~l~D~~G~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~l~~~~~~~~~~~~~~lae~L 94 (398)
T PRK03244 15 QAVMMNNYGTPPLALVRGEGAVVTDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERL 94 (398)
T ss_pred HHHCCCCCCCCCCCEEEEECCEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 87514768999854798474999979989999967088754223898999999999997547775653586999999999
Q ss_pred HHHCCC---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 201013---33123565554035677766543200134786002343546565432123455321134799986433322
Q gi|254780432|r 84 IHSTFA---DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQ 160 (392)
Q Consensus 84 ~~~~~~---~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~ 160 (392)
++..+. .||+|++|||||||+|||+||+ ++|++||+++++|||+|.+++++++++.++.+|.|.+.++.+
T Consensus 95 ~~~~~~~~~~kvff~~SGsEA~E~AlKlAr~-------tgr~~Iis~~~sYHG~T~ga~s~tg~~~~~~~~~p~~~~~~~ 167 (398)
T PRK03244 95 VALLGAPEGARVFFCNSGAEANEAAFKLARL-------TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEH 167 (398)
T ss_pred HHHCCCCCCCEEEEECCHHHHHHHHHHHHHH-------CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 9860899656799718677899999999998-------299879998387768876542336885312346788787277
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 21002688754101233222233322221124621012322110223457213101100344445553101112454530
Q gi|254780432|r 161 AKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDI 240 (392)
Q Consensus 161 ~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi 240 (392)
+||+|++++++.+.+++||||+|||||++|+++||++||++||++|++||++||+|||||||||||+||++|++||+|||
T Consensus 168 ~p~~d~~~l~~~~~~~iAAii~EPiqg~gG~~~~~~~fl~~l~~lc~~~gillI~DEV~tGfGRtG~~fa~e~~~v~PDI 247 (398)
T PRK03244 168 VPYGDVDALAAAVDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDV 247 (398)
T ss_pred CCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHCCCCCCE
T ss_conf 15786689999738985899985876889985688889999999985734536666212487766786156533799988
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCC
Q ss_conf 21034444443443210001112222233223453211110012334554320122210112100002688999988679
Q gi|254780432|r 241 MTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFP 320 (392)
Q Consensus 241 ~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 320 (392)
+|+||+||||+|+||+++++++++.+.++.|++||+|||++|+||+++|++++++++++|++++|++|+++|+++ +||
T Consensus 248 v~~gK~lggG~P~sa~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l--~~~ 325 (398)
T PRK03244 248 VTLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLRVIADEGLLENAERLGKQLRAGIEAL--GHP 325 (398)
T ss_pred EEECCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC--CCC
T ss_conf 997320248876168897188886417887674789898999999999999975579999999999999999854--898
Q ss_pred CEEEEECCCEEEEEEEECCC-HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 70755046400999872499-899999999689899626898899558986889999999999999999852
Q gi|254780432|r 321 NMFLEVRGQGLLIGLKTVFS-PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 321 ~~v~~vRG~Gl~~~ie~~~~-~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+|.+|||+|||++||++.+ ...+...++++|+++...++|+|||.|||+||++|||+++++|+++|.+++
T Consensus 326 -~i~~VRG~Gl~~giel~~~~~~~~~~~~~~~Gll~~~~g~n~ir~~PPl~it~~eid~~~~~l~~~L~~~a 396 (398)
T PRK03244 326 -LVDHVRGRGLLLGIVLTAPVAKAVEAAAREAGFLVNAPAPDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred -CEEEEEEEEEEEEEEECCCHHHHHHHHHHHCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf -61410012689999966731999999999689199318999799949957899999999999999999985
No 15
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=0 Score=776.01 Aligned_cols=386 Identities=30% Similarity=0.489 Sum_probs=349.9
Q ss_pred CCCEECCCCCC-------CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCH
Q ss_conf 43145155888-------8748985010379967997646410226743578789999999999997314506-875781
Q gi|254780432|r 3 KNDFLFNTYDQ-------SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQST 74 (392)
Q Consensus 3 ~~~~~~~~~~~-------~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~~ 74 (392)
+++|+||.|.+ .|++|+||+|+||||.|||+|||+.+|+|++++||+||+|++|+++|++++.|+. ..+.++
T Consensus 11 d~~~~whp~t~~~~~~~~p~~~I~rg~G~~l~D~dG~~YlD~~sg~~~~~lGH~~p~v~~Ai~~Q~~~l~~~~~~~~~~~ 90 (467)
T PRK07030 11 DLKVLWHPCTQMKDHEQLPLIPIKRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHQ 90 (467)
T ss_pred HHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 78631589888644356898679936369899799999999454388634148969999999999975777245776877
Q ss_pred HHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999986520101--3331235655540356777665432001347860023435465654321234553211347999
Q gi|254780432|r 75 QQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFG 152 (392)
Q Consensus 75 ~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~ 152 (392)
...+|+|+|++..| +++|+|+||||||||+|||+||+|+..+|.|+|++||+++++|||+|++++|+++.+.++..|.
T Consensus 91 ~~~elAe~L~~~~P~~l~~v~f~~SGSEAvE~AiKlAr~y~~~~g~~gr~~iis~~~sYHG~T~ga~s~~~~~~~~~~~~ 170 (467)
T PRK07030 91 PVIELSERLVKITPAGLDRVFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETIAAMSVGDVALFTETYK 170 (467)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCC
T ss_conf 99999999997388886879983784899999999999999980898870798733734342177776348701147877
Q ss_pred CCCCCCCCCCCHH-----------------HHHHHH---HCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 8643332221002-----------------688754---1012332222333-222211246210123221102234572
Q gi|254780432|r 153 PKIEGFDQAKFCD-----------------LQSLKN---QISNDTAAILIEP-IQGEGGVRKVPEEFLQQLRKICDDIDA 211 (392)
Q Consensus 153 p~~~~~~~~~~~d-----------------~~~l~~---~~~~~iAavi~Ep-v~g~~G~~~~~~~~l~~l~~lc~~~g~ 211 (392)
|..+++.++|+++ ++.+++ ..++++||||+|| +||+||+++||++||++||++|++||+
T Consensus 171 p~~~~~~~~p~p~~~~~~~g~~~~~~~~~~~~~le~~l~~~~~~iAAvi~EPiiqg~GG~~~~~~~yl~~lr~lc~~~gi 250 (467)
T PRK07030 171 PLLLDTIKVPSPDCYLRPEGMSWEEHSRNMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGV 250 (467)
T ss_pred CCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 87888667589864356678888999999999999999847997469998232336799727998999999999975594
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCC-------CCCCCCCCCCCCCCHH
Q ss_conf 1310110034444555310111245453021034444443-4432100011122222-------3322345321111001
Q gi|254780432|r 212 LLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMN-------QGSHGSTYGGNVLAMV 283 (392)
Q Consensus 212 llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~-------~~~~~~T~~gnpl~~a 283 (392)
|||+|||||||||||+||++|++||+|||+|+||+|+||| |+|||+++++|++.+. +..|++||+|||++||
T Consensus 251 LlI~DEV~tGfGRTG~~fa~e~~gv~PDiit~aKgl~gG~~Pl~av~~~~~I~~~~~~~~~~~~~~~Hg~Ty~GnPlacA 330 (467)
T PRK07030 251 HLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACA 330 (467)
T ss_pred EEECCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 68725003178624585320056789988997043116877538998748999876325655557675889997999999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH-------------HHHHHHHHH
Q ss_conf 2334554320122210112100002688999988679707550464009998724998-------------999999996
Q gi|254780432|r 284 LGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-------------ALLAAKFRD 350 (392)
Q Consensus 284 aa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-------------~~~~~~l~~ 350 (392)
||+++|++|+++++++|++++|++|+++|++|++ || .|.+|||+|||++||++.++ ..+.+.+++
T Consensus 331 Aala~L~ii~~e~l~~~~~~~g~~l~~~l~~l~~-~p-~VgdVRG~GL~~giElv~d~~t~~p~~~~~~~~~~v~~~~~~ 408 (467)
T PRK07030 331 AALATLDIFEQDNVIEANRALARRMAEATAHLAD-HP-HVAEVRQTGMALAIEMVQDKASKTPYPWQERRGLKVYQHALE 408 (467)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC-CC-CEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999999999768999999999999999998707-99-758883475199999703787678885466799999999997
Q ss_pred CCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 89899626898899558986889999999999999999852
Q gi|254780432|r 351 ECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 351 ~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+|+++++.+ |+|+|+|||+||++|||+++++|+++|.+..
T Consensus 409 ~G~l~~~~g-nvi~~~PPL~it~~eid~~~~~l~~al~~a~ 448 (467)
T PRK07030 409 RGALLRPLG-SVVYFLPPYVITPEQIDFLAEVASEGIDIAT 448 (467)
T ss_pred CCCEEEECC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 898897349-9999979927899999999999999999999
No 16
>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=0 Score=771.40 Aligned_cols=384 Identities=41% Similarity=0.651 Sum_probs=361.0
Q ss_pred CCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 31451558888748985010379967997646410226743578789999999999997314506875781899999865
Q gi|254780432|r 4 NDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHL 83 (392)
Q Consensus 4 ~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L 83 (392)
.++++..|.+.|++|+||+|+|+||.|||+||||+||++++++||+||+|++|+++|++++.+..+.|.++...+|+++|
T Consensus 8 ~~~~~~~~~rppivi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~~~~~~~~~~~~~~la~~L 87 (395)
T PRK03715 8 IDSLMYITNRPDIVFTHGKGSWLYDHTGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLL 87 (395)
T ss_pred CCCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 54356656999805998354889979879998823178877745896999999999997547677320278999999998
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20101333123565554035677766543200134786002343546565432123455321134799986433322210
Q gi|254780432|r 84 IHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKF 163 (392)
Q Consensus 84 ~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~ 163 (392)
++..+++||+|++|||||||+|||+||+|+... +++|++||+|+++|||+|++++++|+.+.++..|.|..+++...++
T Consensus 88 ~~~~~~~~v~f~~sGsEAvE~AlKlAr~y~~~~-~~gr~~ii~~~~~yHG~T~~~~s~sg~~~~~~~~~p~~~~~~~~~~ 166 (395)
T PRK03715 88 TQHSCFDKVFFANSGAEANEGAIKLARKWGRKH-KNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAEL 166 (395)
T ss_pred HCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCC-CCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 415588879981875889999999999986246-8998459997578898740221046864445567898899675554
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 02688754101233222233322221124621012322110223457213101100344445553101112454530210
Q gi|254780432|r 164 CDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTI 243 (392)
Q Consensus 164 ~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~ 243 (392)
+|++.+++.+.+++||||+|||||++|+++||++||+++|++|++||++||+|||||||||||+||++|++|++|||+|+
T Consensus 167 ~d~~~~~~~~~~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~ 246 (395)
T PRK03715 167 NDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELAGIEPDIMTL 246 (395)
T ss_pred CCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 55899997349980799993788877985298899999999995189735620110388866685300048999998997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEE
Q ss_conf 34444443443210001112222233223453211110012334554320122210112100002688999988679707
Q gi|254780432|r 244 AKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMF 323 (392)
Q Consensus 244 gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v 323 (392)
||+|+||+|+|||++++++. .+.++.|++||+|||++||||+++|++++++++++|++++|++|+++|++|+++|+ +
T Consensus 247 gKgl~gG~Pl~av~~~~~i~-~~~~g~~g~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~--i 323 (395)
T PRK03715 247 GKGIGGGVPLAALLAKAEVA-VFEAGDQGGTYNGNPLMTAVGYAVISQLVAPGFLEGVRARGEYLKEKLLELSAERG--L 323 (395)
T ss_pred CCHHHCCCCEEEEEECHHHC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC--C
T ss_conf 52442898528999826742-47789888798997189999999999996268999999999999999998650399--1
Q ss_pred EEECCCEEEEEEEECCCHH----HHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 5504640099987249989----9999999689899626898899558986889999999999999999852
Q gi|254780432|r 324 LEVRGQGLLIGLKTVFSPA----LLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 324 ~~vRG~Gl~~~ie~~~~~~----~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
.+|||+|||+++|++.+.. ..+..+.++|+++....+|+|||.|||+||++|||+++++|+++|.+|+
T Consensus 324 ~~vRG~Gl~~~iel~~~~~~~~~~~~~~~~~~gll~~~~~~n~irl~PpL~it~~eid~~~~~l~~aL~~la 395 (395)
T PRK03715 324 EGERGEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTDEIDQMIAMLRSVLDKLA 395 (395)
T ss_pred EEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 357435589999967887089999999998399899228999899979943889999999999999999869
No 17
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=0 Score=772.59 Aligned_cols=380 Identities=41% Similarity=0.690 Sum_probs=350.9
Q ss_pred CCEECCCCCC--CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC-HHHHHHH
Q ss_conf 3145155888--874898501037996799764641022674357878999999999999731450687578-1899999
Q gi|254780432|r 4 NDFLFNTYDQ--SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQS-TQQEIFA 80 (392)
Q Consensus 4 ~~~~~~~~~~--~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~-~~~~~la 80 (392)
++++.++|.. +|++++||+|+||||.|||+||||.||+++.|+|||||+|++|+++|++++.|+++.+.+ +...+|+
T Consensus 26 ~~~~~r~~~~~~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~a 105 (447)
T COG0160 26 EEALARSYGRFRFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELA 105 (447)
T ss_pred HHHHCCCCCCCCCCCEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 98745455555676247740268899589998988256762010378998999999999997301357766633699999
Q ss_pred HHHHHHCC---CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf 86520101---3331235655540356777665432001347860023435465654321234553211-3479998643
Q gi|254780432|r 81 NHLIHSTF---ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ-YLEGFGPKIE 156 (392)
Q Consensus 81 ~~L~~~~~---~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~-~~~~~~p~~~ 156 (392)
|+|.+..| .++++|+||||||||+|||+||.| |+|+.||+|+++|||+|.+++|+|++.. ++.+++|+++
T Consensus 106 e~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~------Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~ 179 (447)
T COG0160 106 EKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAY------TGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPP 179 (447)
T ss_pred HHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH------HCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99997588656776995688377899999999998------589848997886556326668754576653357889999
Q ss_pred CCCCCCCHH-----------------HHHHHHHC------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEE
Q ss_conf 332221002-----------------68875410------1233222233322221124621012322110223457213
Q gi|254780432|r 157 GFDQAKFCD-----------------LQSLKNQI------SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALL 213 (392)
Q Consensus 157 ~~~~~~~~d-----------------~~~l~~~~------~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~ll 213 (392)
++.++||++ ++.+++.+ ++++||+|+|||||+||+++||++||+++|++|++||++|
T Consensus 180 ~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gill 259 (447)
T COG0160 180 GVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILL 259 (447)
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 85881688655675556635556899999999987404787754699984210789974798999999999999819889
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 10110034444555310111245453021034444443443210001112222233223453211110012334554320
Q gi|254780432|r 214 IFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQ 293 (392)
Q Consensus 214 I~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~ 293 (392)
|+|||||||||||+||++|++||+|||+|+||+|+||+|+|+|++++++++ +.++.|++||+|||++||||+++|++|+
T Consensus 260 I~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie 338 (447)
T COG0160 260 IADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGRAEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIE 338 (447)
T ss_pred EEECCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCEEEEECCHHHCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 995665588866260122420999878985333457872067744577601-4776547777869899999999999998
Q ss_pred CCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC----------HHHHHHHHHHCCEEEEECC--CC
Q ss_conf 12221011210000268899998867970755046400999872499----------8999999996898996268--98
Q gi|254780432|r 294 SDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS----------PALLAAKFRDECLLTAPSS--DN 361 (392)
Q Consensus 294 ~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~----------~~~~~~~l~~~Gll~~~~~--~~ 361 (392)
+++|++|++++|++++++|++|+++|| +|.||||+|||+++|++++ ...++..++++||++..+| +|
T Consensus 339 ~e~L~~~a~~~G~~l~~~L~~l~~~~~-~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~n 417 (447)
T COG0160 339 EENLLERAAELGEYLRDRLEELQEKHP-LIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGN 417 (447)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCC
T ss_conf 742999999999999999999986467-4421244650789998337877899999999999999986988854578786
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 899558986889999999999999999852
Q gi|254780432|r 362 VVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 362 ~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+|||.|||+||++++|+++++|++++.++.
T Consensus 418 viRi~PPL~is~e~~d~~l~il~~al~~~~ 447 (447)
T COG0160 418 VLRILPPLTISDEELDEGLDILEEALKEAL 447 (447)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 799828954389999999999999998549
No 18
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=767.38 Aligned_cols=387 Identities=28% Similarity=0.461 Sum_probs=347.5
Q ss_pred CCCEECCCCCC-------CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC--CCC
Q ss_conf 43145155888-------874898501037996799764641022674357878999999999999731450687--578
Q gi|254780432|r 3 KNDFLFNTYDQ-------SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNL--YQS 73 (392)
Q Consensus 3 ~~~~~~~~~~~-------~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~--~~~ 73 (392)
+++|+||.|.+ .|++|+||+|+|+||.|||+||||++|+|++++||+||+|++|+++|++++.+.+.. +.+
T Consensus 10 d~~~~~hp~t~~~~~~~~~p~vi~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Ai~~Q~~~l~~~~~~~~~~~ 89 (459)
T PRK05965 10 DRAHLIHPVASYRGHEARGVTVLESAKGAFLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAKQMRKLPYATGYFHFGS 89 (459)
T ss_pred HHHHCCCCCCCHHHCCCCCCEEEEEEEECEEEECCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 99755888888112267899699962508899589999988686288656505979999999999975677356656686
Q ss_pred HHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 189999986520101--333123565554035677766543200134786002343546565432123455321134799
Q gi|254780432|r 74 TQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGF 151 (392)
Q Consensus 74 ~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~ 151 (392)
+...+|+++|++..| +++|+|+||||||||+|||+||+|+.+++.|+|++||+|+++|||+|.+++++++.+.+++.|
T Consensus 90 ~~~~~la~~L~~~~p~~l~~v~f~~SGSEAvE~AlKlar~y~~a~g~~~r~~ii~~~~syHG~T~~~~slt~~~~~~~~~ 169 (459)
T PRK05965 90 EPAIRLAAELAERAPGSLNHVYFTLGGSDAVDSAVRFITHYWNATGRPSKKQFIALERGYHGSSSVGAGLTALPAFHRGF 169 (459)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCC
T ss_conf 69999999999857888687998486799999999999999997279987579997178589974310257774322356
Q ss_pred CCCCCCCCCCCC-----------------HHHHHHHHHC----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 986433322210-----------------0268875410----1233222233322221124621012322110223457
Q gi|254780432|r 152 GPKIEGFDQAKF-----------------CDLQSLKNQI----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDID 210 (392)
Q Consensus 152 ~p~~~~~~~~~~-----------------~d~~~l~~~~----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g 210 (392)
++..++..++|. .+++++++.+ +++|||||+|||||+||+++||++||+++|++|++||
T Consensus 170 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~vAAvi~EPi~g~gG~~~pp~~yl~~lr~lc~~~g 249 (459)
T PRK05965 170 DLPLPWQHHIPSPYAYRNPVGDDPQAIIAASVAALEAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELG 249 (459)
T ss_pred CCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 89999862357886556878897788999999999999986188757999954644668853287688799999987569
Q ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCH
Q ss_conf 21310110034444555310111245453021034444443-443210001112222233-------2234532111100
Q gi|254780432|r 211 ALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQG-------SHGSTYGGNVLAM 282 (392)
Q Consensus 211 ~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~-------~~~~T~~gnpl~~ 282 (392)
++||+|||||||||||+||++|++||+|||+|+||+|+||| |+|+++++++|++.+..+ .|++||+|||++|
T Consensus 250 illI~DEV~TGfGRtG~~fa~e~~gv~PDiv~~gKgL~gG~~Plsav~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla~ 329 (459)
T PRK05965 250 ILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSA 329 (459)
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 17998305417762447410036661888888734345786751689764899987611566565445677899898999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH-------------HHHHHHHH
Q ss_conf 12334554320122210112100002688999988679707550464009998724998-------------99999999
Q gi|254780432|r 283 VLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-------------ALLAAKFR 349 (392)
Q Consensus 283 aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-------------~~~~~~l~ 349 (392)
|||+++|++++++++++|++++|++|.++|++|.+ || .|.+|||+|||+++|++.+. ..+..+++
T Consensus 330 Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~L~~-~p-~i~dVRG~GLm~gielv~d~~~~~~~~~~~~~~~~i~~~~~ 407 (459)
T PRK05965 330 AVGLEVLRLYHEGGLLANGQAAAPRFAAGLDALRA-HP-LVGDVRGRGLLGALELVADKASKTPFDAALEPADRIFDRAY 407 (459)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC-CC-CEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999998634999999999999999998764-99-76867825627999971265446677554799999999999
Q ss_pred HCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 689899626898899558986889999999999999999852
Q gi|254780432|r 350 DECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 350 ~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
++|+++.+.++|++||.|||+||++|||+++++|+++|.+|.
T Consensus 408 ~~Glli~~~g~~vl~l~PPL~It~~eid~~~~~l~~al~evl 449 (459)
T PRK05965 408 ANGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLDDVL 449 (459)
T ss_pred HCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 699299807999899978820899999999999999999998
No 19
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=766.15 Aligned_cols=384 Identities=27% Similarity=0.469 Sum_probs=350.2
Q ss_pred CCCCEECCCC--CCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC-CCCHHHHH
Q ss_conf 8431451558--88874898501037996799764641022674357878999999999999731450687-57818999
Q gi|254780432|r 2 NKNDFLFNTY--DQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNL-YQSTQQEI 78 (392)
Q Consensus 2 ~~~~~~~~~~--~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~-~~~~~~~~ 78 (392)
++++|.+++. .++|++|+||+|+||||.|||+||||+||+|+++|||+||+|++|+++|++++.+..+. +.++...+
T Consensus 13 ~~~~~~~~~~~~~~~P~~i~ra~G~~l~D~dG~~yLD~~sg~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~ 92 (448)
T PRK08593 13 EDEHYFAKSGRIKYYPLVIDHGYGATLVDIEGKTYIDLLASASSQNVGHAPPEVVEAIKAQADKFIHYTPAYMYHEPLVR 92 (448)
T ss_pred HHHHHCCCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
T ss_conf 99974567889871598489735498996996999993523764010489899999999998407673666314679999
Q ss_pred HHHHHHHHCCC---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 99865201013---33123565554035677766543200134786002343546565432123455321-134799986
Q gi|254780432|r 79 FANHLIHSTFA---DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL-QYLEGFGPK 154 (392)
Q Consensus 79 la~~L~~~~~~---~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~p~ 154 (392)
|+++|++..|. .+|+|++|||||||+|||+||+| |||++||+|+++|||+|++++|+|+.. ..++.++|.
T Consensus 93 la~~L~~~~p~~~~~~v~f~~SGsEAvE~AlKlAr~~------tgr~~ii~~~~~yHG~T~ga~s~sg~~~~~~~~~~p~ 166 (448)
T PRK08593 93 LAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAY------TGRPYIISFTNAYHGSTYGSLSMSAISLNMRKKYGPL 166 (448)
T ss_pred HHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHC------CCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCC
T ss_conf 9999998578676637997187578999999999754------8998799994787768734001047875654456899
Q ss_pred CCCCCCCCCHH-----------------HHHHHHH----C-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE
Q ss_conf 43332221002-----------------6887541----0-123322223332222112462101232211022345721
Q gi|254780432|r 155 IEGFDQAKFCD-----------------LQSLKNQ----I-SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDAL 212 (392)
Q Consensus 155 ~~~~~~~~~~d-----------------~~~l~~~----~-~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~l 212 (392)
++++.++|+++ ++.+++. + .++|||||+|||||++|+++||++||+++|++|++||++
T Consensus 167 ~p~~~~vp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPvqg~gG~~~~p~~yl~~lr~lc~~~gil 246 (448)
T PRK08593 167 LPGFYHIPFPDKYRGMYEEPQANSVEEYLAPLKEMFEKYVPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGIL 246 (448)
T ss_pred CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEE
T ss_conf 99957807986334545787067999999999999985178897699999788788898738878868999999866806
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 31011003444455531011124545302103444444344321000111222223322345321111001233455432
Q gi|254780432|r 213 LIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNII 292 (392)
Q Consensus 213 lI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l 292 (392)
||+|||||||||||+||++|++||+|||+|+||+|+||+|+||++++++|++.+.+..|++||+|||++||||+++|+++
T Consensus 247 lI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~Plsav~~~~ei~~~~~~~~h~~T~~Gnpla~aaa~a~L~~i 326 (448)
T PRK08593 247 FAVDDIQQGLGRTGKWSSISHFNITPDLMTFGKSLAGGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCEAALATIDMI 326 (448)
T ss_pred EEEEEEECCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 98743001777567603554305288867773002588740799875898852178865657899989999999999999
Q ss_pred HCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH----------HHHHHHHHHCCEEEEECCCCE
Q ss_conf 0122210112100002688999988679707550464009998724998----------999999996898996268988
Q gi|254780432|r 293 QSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP----------ALLAAKFRDECLLTAPSSDNV 362 (392)
Q Consensus 293 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------~~~~~~l~~~Gll~~~~~~~~ 362 (392)
+++++++|++++|++|+++|+++.++|| .|.+|||+|||++||++.++ ..+.+.++++|+++.+.++|+
T Consensus 327 ~~~~l~~~~~~~g~~l~~~L~~l~~~~p-~v~dVRG~GL~~giElv~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~~gn~ 405 (448)
T PRK08593 327 EDESLLQASAEKGEYVRKRFDQWVSKYN-FVGDVRGKGLSIGIDIVSDKKLKTRDAEAALKICNYCFEHGVVIIAVAGNV 405 (448)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHCCC-CEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCE
T ss_conf 7443999999999999999999986299-788730255178999964555578888999999999997890898679998
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 995589868899999999999999998529
Q gi|254780432|r 363 VRILPPLTITAEEIHEGLERIERTAIKLSH 392 (392)
Q Consensus 363 irl~Ppl~it~~eid~~i~~l~~al~~L~~ 392 (392)
|||.|||+||++|||+++++|+++|.+|.+
T Consensus 406 ir~~PpL~it~~eid~~~~~l~~al~~l~a 435 (448)
T PRK08593 406 LRFQPPLVITYEQLDTALNTIEDALTALEA 435 (448)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 999789008899999999999999999874
No 20
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=0 Score=767.56 Aligned_cols=374 Identities=41% Similarity=0.695 Sum_probs=356.4
Q ss_pred CEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 14515588887489850103799679976464102267435787899999999999973145068757818999998652
Q gi|254780432|r 5 DFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLI 84 (392)
Q Consensus 5 ~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~ 84 (392)
.|++++|+++|++|+||+|+|+||.|||+||||.||+|++++|| ||+|.+|+++|++++++.++.+.+...++++++|.
T Consensus 2 ~~~~~~y~~~Pi~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~p~i~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~ 80 (375)
T PRK04260 2 TYLFSNYKRAAIEFVKAEGNYLIDTTGKTYLDFSSGIGVTNLGF-HPQVQQALTDQAGLIWHSPNLYLSSLQEEVAQKLT 80 (375)
T ss_pred CCCCCCCCCCCCCEEEEECCEEEECCCCEEEEECCCHHHHCCCC-CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
T ss_conf 70556689999888985749999697799999153787640278-99999999999856569874778899999998523
Q ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 01013331235655540356777665432001347860023435465654321234553211347999864333222100
Q gi|254780432|r 85 HSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFC 164 (392)
Q Consensus 85 ~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~ 164 (392)
... ..+++|++|||||||+|||+||++ |+|++||+|+++|||+|.+++++|+++.++++|+|..+.+...+++
T Consensus 81 ~~~-~~~~~f~~SGSEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~ga~s~tg~~~~~~~~~~~~p~~~~~~~~ 153 (375)
T PRK04260 81 GDK-DYLAFFCNSGAEANEAAIKLARKA------TGKQEIITFQNSFHGRTFGAMSATGQDKIKQGFGDGVPHFSYAIFN 153 (375)
T ss_pred CCC-CCEEEECCCHHHHHHHHHHHHHHC------CCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 666-747997086789999999987654------7998699977889967440122048743345778899873452104
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 26887541012332222333222211246210123221102234572131011003444455531011124545302103
Q gi|254780432|r 165 DLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA 244 (392)
Q Consensus 165 d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g 244 (392)
|++.+++...+++||||+|||||++|+++||++||++||++|++||++||+|||||||||||+||++|++|++|||+|+|
T Consensus 154 d~~~~~~~~~~~iAAiiiEpiqg~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~g 233 (375)
T PRK04260 154 DLNSVKALVNKNTAAVMLELVQGESGVLPADKAFVKALADYCQETGILLIVDEVQTGIGRTGKLYAFEHYGIEPDIFTLA 233 (375)
T ss_pred CHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHCCCCCCCEEEEC
T ss_conf 58899986377835999981058898757898999999999998476257301211787656865543169888789871
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEE
Q ss_conf 44444434432100011122222332234532111100123345543201222101121000026889999886797075
Q gi|254780432|r 245 KGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFL 324 (392)
Q Consensus 245 K~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~ 324 (392)
|+||||+|+|||++++++++.+.++.|++||+|||++||||+++|++++++++++|++++|++|+++|+++.++|| .|.
T Consensus 234 Kglg~G~P~sav~~~~~i~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~~~~~~~-~i~ 312 (375)
T PRK04260 234 KGLANGLPVGAMLGKSSLGGAFGYGSHGSTFGGNKLSMAAAKATLEIMLTAGFLETVLSKGNKLQEQLQEALQDKE-TVT 312 (375)
T ss_pred HHCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC-CEE
T ss_conf 0104886439999867874466787857779989899999999999998646999999999999999999985399-737
Q ss_pred EECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 504640099987249989999999968989962689889955898688999999999999999
Q gi|254780432|r 325 EVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 325 ~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
+|||+|||+++|++.+...+.+.++++|+++.+.+.|+|||.|||+||++|||+++++|++++
T Consensus 313 ~vRG~Gl~~gie~~~~~~~~~~~~~~~Gll~~~~g~nvi~~~Ppl~it~~eid~~~~~l~~vF 375 (375)
T PRK04260 313 TVRGLGYMIGIETTADLSQLVQAARDKGLIILTAGTNVIRLLPPLTISKAEIEKGIAILSEIF 375 (375)
T ss_pred EEEEEEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 630557999999578999999999968969940799989998993488999999999999869
No 21
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=0 Score=764.43 Aligned_cols=388 Identities=28% Similarity=0.495 Sum_probs=351.1
Q ss_pred CCCEECCCCC----CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 4314515588----887489850103799679976464102267435787899999999999973145068757818999
Q gi|254780432|r 3 KNDFLFNTYD----QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEI 78 (392)
Q Consensus 3 ~~~~~~~~~~----~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~ 78 (392)
+++|+||.+. ..|++|+||+|+||||.|||+||||.||+|+++|||+||+|++|+++|++++.+.+..+.++...+
T Consensus 14 d~~~~~h~~~~~~~~~p~vi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~ 93 (451)
T PRK07678 14 DEQYVWHGMRPFNPNATMVGAKAEGCWVTDIQGKRYLDGMSGLWCVNVGYGRKELAEAAYEQLQTLSYFPLSQSHEPAIK 93 (451)
T ss_pred HHHHCCCCCCCCCCCCCEEEEEEEECEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf 89867986766688899789960448899798899999870898634269969999999999975888677534689999
Q ss_pred HHHHHHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 998652010133-3123565554035677766543200134786002343546565432123455321134799986433
Q gi|254780432|r 79 FANHLIHSTFAD-RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEG 157 (392)
Q Consensus 79 la~~L~~~~~~~-~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~ 157 (392)
|+++|++..|.+ +++|+||||||||+|||+||+|+..+|.|+|++||++++||||+|.+++++|++..++..|.|..++
T Consensus 94 lae~L~~~~p~~~~vff~~SGsEAvE~AiKlAr~y~~~~g~~~r~~ii~~~~~yHG~T~ga~s~tg~~~~~~~~~p~~~~ 173 (451)
T PRK07678 94 LAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRGYHGNTMGALAATGQAQRKYKYEPLAPG 173 (451)
T ss_pred HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCC
T ss_conf 99999975797618995397389999999999999986099974243462674038972345115743105788888888
Q ss_pred CCCCCCHH-----------------HHHHHH----HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 32221002-----------------688754----101233222233322221124621012322110223457213101
Q gi|254780432|r 158 FDQAKFCD-----------------LQSLKN----QISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFD 216 (392)
Q Consensus 158 ~~~~~~~d-----------------~~~l~~----~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 216 (392)
+.++++++ ++.+++ ..+++|||||+||||+++|+++||++||++||++|++||++||+|
T Consensus 174 ~~~~~~p~~~r~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAaii~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~D 253 (451)
T PRK07678 174 FLHVAPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAFIMEPIITGGGILMPPQDYMKAVHEICQKHGALLISD 253 (451)
T ss_pred EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHEEECCCEEEEC
T ss_conf 15738984235776665226679999999999875078867999997537778823188798677877412459557732
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCHHHHHHHH
Q ss_conf 10034444555310111245453021034444443-443210001112222233------22345321111001233455
Q gi|254780432|r 217 EVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQG------SHGSTYGGNVLAMVLGEKVL 289 (392)
Q Consensus 217 EV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~------~~~~T~~gnpl~~aaa~a~L 289 (392)
||||||||||+||++|++||+|||+|+||+|+||| |+|+|+++++|++.+.+. .|++||+|||++||+|+++|
T Consensus 254 EV~tGfGRtG~~fa~e~~gv~PDiv~~gK~l~gG~~Plsav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L 333 (451)
T PRK07678 254 EVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEFFRHINTFGGNPAACALALKNL 333 (451)
T ss_pred CCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 24027874566500110595277200133445777761677762989976357887666434788987989999999999
Q ss_pred HHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH-----------HHHHHHHHHCCEEEEEC
Q ss_conf 4320122210112100002688999988679707550464009998724998-----------99999999689899626
Q gi|254780432|r 290 NIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-----------ALLAAKFRDECLLTAPS 358 (392)
Q Consensus 290 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-----------~~~~~~l~~~Gll~~~~ 358 (392)
++++++++++|++++|++|.++|+++.++|| +|.+|||+|||++||++.+. ..+...++++|+++.+.
T Consensus 334 ~~l~~~~l~~~~~~~g~~l~~~L~~~~~~~p-~i~dVRG~GLm~gielv~d~~~~~p~~~~~~~~i~~~~~~~Glli~~~ 412 (451)
T PRK07678 334 EIMENENLIERSAQLGSLLLEQLKEELGEHP-LVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVNACKEKGLIIGKN 412 (451)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEECC
T ss_conf 9984150999999999999999999974599-888876165689999853665578799999999999999779888147
Q ss_pred C------CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8------98899558986889999999999999999852
Q gi|254780432|r 359 S------DNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 359 ~------~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+ +|+|||.|||+||++|||+++++|+++|.+|.
T Consensus 413 g~~~~~~~n~lr~~PPL~it~~eid~~~~~l~~al~~v~ 451 (451)
T PRK07678 413 GMTVAGYNNVLTLAPPLCISSEELAFVVGTLKTAMERIK 451 (451)
T ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 873257899899978824889999999999999999639
No 22
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=763.52 Aligned_cols=388 Identities=22% Similarity=0.383 Sum_probs=345.5
Q ss_pred CCCEECCCCCC---------CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC--CC
Q ss_conf 43145155888---------87489850103799679976464102267435787899999999999973145068--75
Q gi|254780432|r 3 KNDFLFNTYDQ---------SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN--LY 71 (392)
Q Consensus 3 ~~~~~~~~~~~---------~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~--~~ 71 (392)
+++|+||.+.+ .|++|+||+|+||||.|||+||||++|+|++++||+||+|++|+++|++++.+.+. .+
T Consensus 12 d~~~~whp~~~~~~~~~~~~p~~vi~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~Q~~~l~~~~~~~~~ 91 (461)
T PRK07482 12 DRDHFFHPSTHLGDHARGELPGRIVAGGEGIRITDHQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGH 91 (461)
T ss_pred HHHHCCCCCCCCHHHHCCCCCCEEEEEEEEEEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 88644488877022431578985899642468997999999996635886425769499999999999658761146775
Q ss_pred CCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 78189999986520101--3331235655540356777665432001347860023435465654321234553211347
Q gi|254780432|r 72 QSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLE 149 (392)
Q Consensus 72 ~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~ 149 (392)
.++...+||++|++..| ++||+|+||||||||+|||+||+|+...|+|+|++||+|++||||+|++++|+++.+.++.
T Consensus 92 ~~~~~~~lAe~L~~~~p~~l~~v~f~~SGSEAvE~AiKlAr~y~~~~g~~~r~~Iis~~~syHG~T~~a~s~tg~~~~~~ 171 (461)
T PRK07482 92 GTEASIELSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGIVTGSLTGLSLFHQ 171 (461)
T ss_pred CCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 68899999999997578886879961866999999999999998861887654599961785567531300246633346
Q ss_pred CCCCCCCCCCCCCCH------------------HHHHHHHH----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 999864333222100------------------26887541----01233222233322221124621012322110223
Q gi|254780432|r 150 GFGPKIEGFDQAKFC------------------DLQSLKNQ----ISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICD 207 (392)
Q Consensus 150 ~~~p~~~~~~~~~~~------------------d~~~l~~~----~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~ 207 (392)
.|++..+++.+.+.+ .++.+++. .+++|||||+|||||++|+++||++||++||++|+
T Consensus 172 ~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvI~EPi~g~gG~~~p~~~yl~~lr~lc~ 251 (461)
T PRK07482 172 HFDLPIDRVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIGEPVLGTGGIVPPPAGYWEAIQAVLK 251 (461)
T ss_pred CCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 66799878322468854567886633777789999999999985098848999805635768855188789799999962
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC-------CCCCCCCCCC
Q ss_conf 45721310110034444555310111245453021034444443-443210001112222233-------2234532111
Q gi|254780432|r 208 DIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQG-------SHGSTYGGNV 279 (392)
Q Consensus 208 ~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~-------~~~~T~~gnp 279 (392)
+||++||+|||||||||||+||++|++||+|||+|+||+|+||| |+|++++++++++.+..+ .|++||+|||
T Consensus 252 ~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~h~~T~~GnP 331 (461)
T PRK07482 252 KYDILLIADEVVTGFGRLGSMFGSQHYGIEPDLITIAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAMGHGWTYSGHP 331 (461)
T ss_pred CCCCEEEECCCEECCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf 45963771544324750358411116899997776324445776762799856889987632654466640156899998
Q ss_pred CCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH-------------HHHHH
Q ss_conf 10012334554320122210112100002688999988679707550464009998724998-------------99999
Q gi|254780432|r 280 LAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-------------ALLAA 346 (392)
Q Consensus 280 l~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-------------~~~~~ 346 (392)
++||||+++|++++++++++|++++|++|+++|+++.++|| +|.+|||+|||+++|++.+. ..+.+
T Consensus 332 lacAaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~~~~~~p-~v~~VRG~GL~~gvelv~~~~~~~~~~~~~~~~~~i~~ 410 (461)
T PRK07482 332 ICAAAALANLDILERENLVGNAGEVGAYFRAQLRAAFGGHP-LVGEVRGVGMLAAVEFVADRDDRTFFDPALKIGPQVSA 410 (461)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEECCEEEEEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999983062999999999999999999985499-87888806758999995056546666745799999999
Q ss_pred HHHHCCEEEEEC-CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999689899626-898899558986889999999999999999852
Q gi|254780432|r 347 KFRDECLLTAPS-SDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 347 ~l~~~Gll~~~~-~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
.++++|+++... .+|+|||.|||+||++|||+++++|+++|.+|+
T Consensus 411 ~~~~~Gll~~~~~~g~vl~~~PPL~Is~~eid~~~~~l~~al~~v~ 456 (461)
T PRK07482 411 AALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAAKAVDEVA 456 (461)
T ss_pred HHHHCCCEEEECCCCCEEEEECCEECCHHHHHHHHHHHHHHHHHHH
T ss_conf 9997898896059999899979940889999999999999999999
No 23
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=765.29 Aligned_cols=387 Identities=27% Similarity=0.480 Sum_probs=350.5
Q ss_pred CCCEECCCCCC-------CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCH
Q ss_conf 43145155888-------87489850103799679976464102267435787899999999999973145068-75781
Q gi|254780432|r 3 KNDFLFNTYDQ-------SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQST 74 (392)
Q Consensus 3 ~~~~~~~~~~~-------~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~ 74 (392)
+.+|+||.|.+ .|++|+||+|+||||.|||+||||++|+++++|||+||+|.+|+++|++++.+.+. .|.++
T Consensus 16 d~~~~w~p~~~~~~~~~~~p~vi~rg~G~~l~D~dG~~ylD~~~g~~~~~lGH~hp~v~~Ai~~Q~~~l~~~~~~~~~~~ 95 (460)
T PRK06541 16 AKRHLWMHFTRHGAYRGIALPVIVRGEGVYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAEQAGTLAFFPLWSYAHP 95 (460)
T ss_pred HHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 99754889898522146899669966149899699999999651487531178989999999999975787567755787
Q ss_pred HHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999986520101--3331235655540356777665432001347860023435465654321234553211347999
Q gi|254780432|r 75 QQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFG 152 (392)
Q Consensus 75 ~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~ 152 (392)
...+|+++|++..| +++|+|+||||||||+|||+||+|+...|+|+|++||+|+++|||+|.+++|+|+.+.++++|+
T Consensus 96 ~~~~lae~L~~~~p~~l~~v~f~~SGsEA~E~AiklAr~y~~~~G~~~r~~iis~~~~yHG~t~ga~s~tg~~~~~~~~~ 175 (460)
T PRK06541 96 PAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFE 175 (460)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHCCCCC
T ss_conf 99999999997488886989970874899999999999999961999861899966871678657887518800037887
Q ss_pred CCCCCCCCCCCHH------------------HHHHHHH----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 8643332221002------------------6887541----01233222233322221124621012322110223457
Q gi|254780432|r 153 PKIEGFDQAKFCD------------------LQSLKNQ----ISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDID 210 (392)
Q Consensus 153 p~~~~~~~~~~~d------------------~~~l~~~----~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g 210 (392)
|..+++.++|+++ ++.+++. .+++|||||+|||||++|+++||++||+.||++|++||
T Consensus 176 p~~~g~~~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavI~EPi~g~gG~~~~~~~fl~~lr~lc~~~g 255 (460)
T PRK06541 176 PLTPGGFRVPNTNFYRAPEHGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYD 255 (460)
T ss_pred CCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 88999167688864457767899889999999999999985199857899845777878865686899999999746479
Q ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCHHHH
Q ss_conf 21310110034444555310111245453021034444443-443210001112222233----2234532111100123
Q gi|254780432|r 211 ALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQG----SHGSTYGGNVLAMVLG 285 (392)
Q Consensus 211 ~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~----~~~~T~~gnpl~~aaa 285 (392)
++||+|||||||||||+||++|++||+|||+|+||+|+||| |+||++++++|++.+.++ .|++||+|||++|+||
T Consensus 256 illI~DEVqtGfGRtG~~fa~e~~gv~PDiv~~gKglg~G~~Pl~av~~~~~i~~~~~~~~~~~~hg~T~~gnpla~aaa 335 (460)
T PRK06541 256 VLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLVEPFLDGKTMFLHGYTFGGHPVSAAVA 335 (460)
T ss_pred CEEECCCCEECCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 53766751207865337322016894895141223125887770467403999876526885313576788898999999
Q ss_pred HHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH----------------HHHHHHHH
Q ss_conf 34554320122210112100002688999988679707550464009998724998----------------99999999
Q gi|254780432|r 286 EKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP----------------ALLAAKFR 349 (392)
Q Consensus 286 ~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------------~~~~~~l~ 349 (392)
+++|++|+++++++|++++|++|+++|++|.+ || +|.+|||+|||++||++.+. ..+.+.++
T Consensus 336 ~avL~~i~~~~l~~~v~~~G~~l~~~L~~l~~-~p-~v~dVRG~GL~~giElv~d~~~~~~~~~~~~~~~~~~~l~~~~~ 413 (460)
T PRK06541 336 LANLDIFEREGLLDHVRDNEPAFRATLEKLLD-LP-IVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALF 413 (460)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC-CC-CEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999998657999999999999999999746-99-77874107738999954576545667646778999999999999
Q ss_pred HCCEEEEEC--CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 689899626--898899558986889999999999999999852
Q gi|254780432|r 350 DECLLTAPS--SDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 350 ~~Gll~~~~--~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
++|+++.+. ++|+|||.|||+||++|||+++++|+++|.|+.
T Consensus 414 ~~Gl~~~~~~~~~~virl~PPL~it~~eid~~l~~l~~aL~e~~ 457 (460)
T PRK06541 414 EAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEAILRSVLTEAW 457 (460)
T ss_pred HCCEEEEECCCCCCEEEEECCEECCHHHHHHHHHHHHHHHHHHH
T ss_conf 78959974589998899978933789999999999999999999
No 24
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=764.18 Aligned_cols=376 Identities=27% Similarity=0.462 Sum_probs=333.1
Q ss_pred CEECCC---CCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 145155---88887489850103799679976464102267435787899999999999973145068757818999998
Q gi|254780432|r 5 DFLFNT---YDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFAN 81 (392)
Q Consensus 5 ~~~~~~---~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~ 81 (392)
+++.++ ||..|+.|+||+|+||||.+||+|||++|| +.++||+||+|++|+++|++++ ++++.|.++...+|||
T Consensus 596 ~~~~~~~~~~y~~Pi~ivRGeG~yL~D~~Gr~YLD~~~n--V~~vGH~hP~v~~ai~~Q~~~L-~t~t~y~~~~~~~lAe 672 (1015)
T PRK06148 596 ELLLPNLSISYSDPIKFVRGDGVWLIDNRGRAYLDCFNN--VCHVGHAHPRVVEAAARQAARL-NTNTRYLHDAIVAYAE 672 (1015)
T ss_pred HHCCCCCCCCCCCCCEEEECCEEEEECCCCCEEEECCCC--CCCCCCCCHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHH
T ss_conf 861754112478997687603537996899877761467--5543557989999999999762-4266656836999999
Q ss_pred HHHHHC--CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf 652010--1333123565554035677766543200134786002343546565432123455321134799986433--
Q gi|254780432|r 82 HLIHST--FADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEG-- 157 (392)
Q Consensus 82 ~L~~~~--~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~-- 157 (392)
+|++.. ++++|||+||||||||+||||||+| |||+.||++++||||+|.+++++|+....++...+.++.
T Consensus 673 rL~~~~P~~l~~vfF~NSGSEAnE~AiKlAr~~------tgr~~iI~~~~aYHG~T~gals~s~~~~~~~~g~~~~~~v~ 746 (1015)
T PRK06148 673 RLTATLPEGLTVASFVNSGSEANSLALRLARAH------TGARDAIVLDWAYHGTTQELIDLSPYKFKRKGGKGRPDHVE 746 (1015)
T ss_pred HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHH------HCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCEE
T ss_conf 999847777655763077388999999999986------08997488603556863667763677455677889998537
Q ss_pred ------CCCCCCH----H-----HHHHHHH------CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEC
Q ss_conf ------3222100----2-----6887541------01233222233322221124621012322110223457213101
Q gi|254780432|r 158 ------FDQAKFC----D-----LQSLKNQ------ISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFD 216 (392)
Q Consensus 158 ------~~~~~~~----d-----~~~l~~~------~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 216 (392)
..+.+++ + .+.+++. ..+.+||||+|||||+||+++||++||+++|++|++||+++|+|
T Consensus 747 ~~~~P~~yr~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~Aa~I~EpIqg~gG~~~~p~gyl~~v~~~c~~~G~LlI~D 826 (1015)
T PRK06148 747 EAEVPDSYRAPERWPDAEHGRRFAESVAEQIAAMRAQGRAPAFFIAESIPSVAGQVFLPEGYLREVYAMVRAAGGVCIAD 826 (1015)
T ss_pred ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 78899765677789816789999999999999987158815899978833788840798899999999999839789995
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 10034444555-310111245453021034444443443210001112222233-2234532111100123345543201
Q gi|254780432|r 217 EVQTGYGRTGK-LFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQG-SHGSTYGGNVLAMVLGEKVLNIIQS 294 (392)
Q Consensus 217 EV~tG~GRtG~-~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~-~~~~T~~gnpl~~aaa~a~L~~l~~ 294 (392)
||||||||||+ ||+||++||+|||+|+||+||||||+|||+++++|++.+.++ .|++||+|||++||||+++|++|++
T Consensus 827 EVQtGfGRTG~~~fa~e~~gV~PDIvt~aKglg~G~PlgAv~~~~ei~~~f~~g~~~~sTfgGnPlacAaalavLdii~~ 906 (1015)
T PRK06148 827 EVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGHPMSAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED 906 (1015)
T ss_pred CCCCCCCCCCCCCCEEHHCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 45338782366300003129988879865644478676788985999975426875268878699999999999999987
Q ss_pred CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH----------HHHHHHHHHCCEEEEECC--CCE
Q ss_conf 22210112100002688999988679707550464009998724998----------999999996898996268--988
Q gi|254780432|r 295 DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP----------ALLAAKFRDECLLTAPSS--DNV 362 (392)
Q Consensus 295 ~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------~~~~~~l~~~Gll~~~~~--~~~ 362 (392)
++|++|++++|++|+++|++++++|| +|.+|||.|||+|||++.++ ..++..|+++||++...| +|+
T Consensus 907 e~L~~na~~~G~~l~~~L~~L~~~~p-~IgdVRG~GLm~GiElV~d~~tk~Pa~~~~~~v~~~~~e~GvLi~~~G~~~nV 985 (1015)
T PRK06148 907 EDLRRNALEIGNYLLAGFRSLQQRFD-IIGDVRGLGLFLGIELVTDRKTKAPATAIARKVKDGARERGILIGTEGPKDNV 985 (1015)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCC-CEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCE
T ss_conf 37999999999999999999886089-68876127708999963587778963999999999999789189327899887
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9955898688999999999999999985
Q gi|254780432|r 363 VRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 363 irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
||+.|||+||++++|.++++|+++|.+.
T Consensus 986 lri~PPL~it~e~~D~~l~~Ld~vl~a~ 1013 (1015)
T PRK06148 986 LKMRPPMIFSRADADHLLEVLDDSFAAA 1013 (1015)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9980896455999999999999999997
No 25
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=761.98 Aligned_cols=373 Identities=34% Similarity=0.598 Sum_probs=349.1
Q ss_pred EEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCC
Q ss_conf 4898501037996799764641022674357878999999999999731450687578189999986520101--33312
Q gi|254780432|r 16 IRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVF 93 (392)
Q Consensus 16 ~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~ 93 (392)
+.|..+-|+||+|.|||+||||.||+|++++||+||+|++|+++|++++.+.+..+.++.+++||++|++..| +++||
T Consensus 75 ~~~~~~~~~~L~D~~G~rYLD~~sG~~~~~lGH~~P~I~eAv~~Ql~~~~~~s~~~~~p~~~~LAe~L~~~~P~~l~~vF 154 (468)
T PRK11522 75 VEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSF 154 (468)
T ss_pred EEEECCCCCEEEECCCCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 99965987879969999877745769971267799899999999985357512772766999999999974888889797
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 35655540356777665432001347860023435465654321234553211347999864333222100268875410
Q gi|254780432|r 94 FTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQI 173 (392)
Q Consensus 94 f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~ 173 (392)
|+||||||||+|||+||+|+.. +||++||++++||||+|++++|+|+++.++.+|.|..+++.++||+|++++++.+
T Consensus 155 F~nSGSEAvE~AiKlAr~y~~~---~Gr~~IIs~~~sYHG~T~galS~tg~~~~~~~f~pl~p~~~~vp~~d~~~~~~~~ 231 (468)
T PRK11522 155 FCNSGTESVEAALKLAKAYQSP---RGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTAL 231 (468)
T ss_pred ECCCCHHHHHHHHHHHHHHHHH---HCCCEEEEECCCCCCCCCHHHEECCCHHCCCCCCCCCCCCEECCCCCHHHHHHHH
T ss_conf 3797289999999999997774---0991899971786776422203127621025777899984563789999999999
Q ss_pred ------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf ------12332222333222211246210123221102234572131011003444455531011124545302103444
Q gi|254780432|r 174 ------SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGM 247 (392)
Q Consensus 174 ------~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l 247 (392)
.++|||||+|||||+||+++||++||++||++|++||++||+|||||||||||+||++|++||+|||+|+||+|
T Consensus 232 ~~~~~~~~~vAAvIvEPIqG~gGv~~pp~~yl~~lr~lc~~~giLLI~DEVqTGfGRTG~~fa~e~~gV~PDivt~aKgL 311 (468)
T PRK11522 232 SECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKAL 311 (468)
T ss_pred HHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEECCCCCCCEEEECCCC
T ss_conf 98651489689999977767789826998999999998753807882264122788657851452367898889961555
Q ss_pred CCCC-CCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEE
Q ss_conf 4443-443210001112222--2332234532111100123345543201222101121000026889999886797075
Q gi|254780432|r 248 GGGF-PIGACLATNEVAACM--NQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFL 324 (392)
Q Consensus 248 ~gG~-P~sav~~~~~i~~~~--~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~ 324 (392)
|||| |+||++++++|++.+ .+..|++||+|||++||||+++|++++++++++|++++|++|+++|+++.++||++|.
T Consensus 312 ggG~~Pigav~~~~~i~~~~~~~~~~hg~Tf~GnPlacAaala~L~ii~~e~l~~~a~~~G~~L~~~L~~l~~~~p~~i~ 391 (468)
T PRK11522 312 GGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQ 391 (468)
T ss_pred CCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 57877505897629999998517774466767997999999999999986459999999999999999999876867112
Q ss_pred EECCCEEEEEEEECCC--HHHHHHHHHHCCEEEEEC--CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 5046400999872499--899999999689899626--898899558986889999999999999999852
Q gi|254780432|r 325 EVRGQGLLIGLKTVFS--PALLAAKFRDECLLTAPS--SDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 325 ~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~~~--~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+|||+|||+|+|++.+ ...+.+.++++|+++.+. ++++|||.|||+||++|||+++++|+++|.+|.
T Consensus 392 dVRG~GLm~giel~~~~~~~~v~~~~~~~Gvlv~~~~~~~~~lr~~PPL~It~eeid~~l~~l~~aL~~l~ 462 (468)
T PRK11522 392 EARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVIKAARKALAAMR 462 (468)
T ss_pred EEEECCEEEEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 51003169999957850089999999978919987489998899959965799999999999999999997
No 26
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=0 Score=764.10 Aligned_cols=385 Identities=27% Similarity=0.449 Sum_probs=345.8
Q ss_pred CCCEECCCCCC-------CCEE-EEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCC
Q ss_conf 43145155888-------8748-985010379967997646410226743578789999999999997314506-87578
Q gi|254780432|r 3 KNDFLFNTYDQ-------SDIR-FEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQS 73 (392)
Q Consensus 3 ~~~~~~~~~~~-------~p~~-i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~ 73 (392)
+.+|+||.|.+ .|++ |+||+|+||||.|||+|||++||+|++++||+||+|.+|+++|++++.++. ..+.+
T Consensus 27 D~~~~wHP~t~~~~~~~~~p~i~I~rgeG~~l~D~dG~~yLD~~sg~~~~~lGh~~p~i~~Ai~~Q~~~l~~~~~~~~~~ 106 (472)
T PRK08742 27 DLAVVWHPCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTH 106 (472)
T ss_pred HHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 89773688888200134599713897145889979999998866448964755798999999999997666601377677
Q ss_pred HHHHHHHHHHHHHCC-------CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 189999986520101-------3331235655540356777665432001347860023435465654321234553211
Q gi|254780432|r 74 TQQEIFANHLIHSTF-------ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ 146 (392)
Q Consensus 74 ~~~~~la~~L~~~~~-------~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~ 146 (392)
+...+|+++|++..| ++||+|+||||||||+|||+||+|+..+|.|+|++||+++++|||+|++++|+++.+.
T Consensus 107 ~~~~~Lae~L~~~~P~~~~~~~l~~Vff~~SGSEAvE~AiKlA~~y~~~rg~~~r~~ii~~~~~YHG~T~ga~s~~~~~~ 186 (472)
T PRK08742 107 EPAVQLAERLLAIAPRQPGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALSVGDIPL 186 (472)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCCC
T ss_conf 18999999999857344566776879971866899999999999999953998771587305878887276565158832
Q ss_pred CCCCCCCCCCCCCCCCCHH-----------------HHHHH---HHCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHCC
Q ss_conf 3479998643332221002-----------------68875---41012332222333-222211246210123221102
Q gi|254780432|r 147 YLEGFGPKIEGFDQAKFCD-----------------LQSLK---NQISNDTAAILIEP-IQGEGGVRKVPEEFLQQLRKI 205 (392)
Q Consensus 147 ~~~~~~p~~~~~~~~~~~d-----------------~~~l~---~~~~~~iAavi~Ep-v~g~~G~~~~~~~~l~~l~~l 205 (392)
+++.|+|..++..+.|+++ .+.++ +..+++|||||+|| +||+||+++||++||+++|++
T Consensus 187 ~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~iAA~IiEPviqg~GG~~~p~~~yl~~lr~l 266 (472)
T PRK08742 187 YRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRVQCAGGMRMHHPAYLRRAREL 266 (472)
T ss_pred CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCCHHHHHHHHHH
T ss_conf 25677787888456589975346788877899999899999999857886479997157665387056899999999999
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCC------CCCCCCCCCC
Q ss_conf 2345721310110034444555310111245453021034444443-44321000111222223------3223453211
Q gi|254780432|r 206 CDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQ------GSHGSTYGGN 278 (392)
Q Consensus 206 c~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~------~~~~~T~~gn 278 (392)
|++||+|||+|||||||||||+||++|++||+|||+|+||+||||| |+|||+++++|++.+.+ ..|++||+||
T Consensus 267 c~~~giLLI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~aKgltgGy~Plsav~~~~eI~~~~~~~~~~~~~~hg~Ty~Gn 346 (472)
T PRK08742 267 CDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGN 346 (472)
T ss_pred HHHHCCEEEECCCCCCCCCCCCCEEECCCCCCCCEEEECHHHCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 88729668840330168713445231246779972012121038877707898769999765147766651357899999
Q ss_pred CCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH-------------HHHH
Q ss_conf 110012334554320122210112100002688999988679707550464009998724998-------------9999
Q gi|254780432|r 279 VLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-------------ALLA 345 (392)
Q Consensus 279 pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-------------~~~~ 345 (392)
|++||||+++|++|+++++++|++.+|++|.+.++.+. +|| .|.+|||+|||+++|++.+. ..+.
T Consensus 347 PlacAaala~L~i~~~e~l~~~~~~~g~~l~~~~~~l~-~~p-~V~dVRg~GL~~gvElv~d~~~~~~~~~~~~~~~~~~ 424 (472)
T PRK08742 347 PLACAAALATLDIFADDDVIARNQPIAARMTQLAAQIG-EHP-AVADVRQAGMIVAFELTRGGNKRTPFPPAARVGLHAY 424 (472)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC-CCC-CEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
T ss_conf 89999999999999865599999999999999999615-899-7898426864999997158765787877789999999
Q ss_pred HHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999968989962689889955898688999999999999999985
Q gi|254780432|r 346 AKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 346 ~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+.++++|+++++.+ |+|+|.|||+||++|||+++++|++++.+.
T Consensus 425 ~~~~~~Gll~r~~G-~~i~~~PPL~it~~eid~~~~~l~~al~ea 468 (472)
T PRK08742 425 RAALARGVVLRPLG-DVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred HHHHHCCCEEEECC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99997894898549-999997994068999999999999999999
No 27
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=761.93 Aligned_cols=387 Identities=28% Similarity=0.502 Sum_probs=351.3
Q ss_pred CCCEECCCCC-------CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC--CCCC
Q ss_conf 4314515588-------887489850103799679976464102267435787899999999999973145068--7578
Q gi|254780432|r 3 KNDFLFNTYD-------QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN--LYQS 73 (392)
Q Consensus 3 ~~~~~~~~~~-------~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~--~~~~ 73 (392)
+++|+||.|. +.|++|+||+|+||||.|||+||||++|+|++++||+||+|.+|+++|++++.+.+. .+.+
T Consensus 6 d~~~~whp~~~~~~~~~~~Pi~i~~g~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~ 85 (448)
T PRK07481 6 NARRFWHPMAHPAEMKARPPIIIVRGDGCYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTH 85 (448)
T ss_pred HHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 54123289988442357899589971518899698899999543588633257979999999999965677136664468
Q ss_pred HHHHHHHHHHHHHC---CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 18999998652010---133312356555403567776654320013478600234354656543212345532113479
Q gi|254780432|r 74 TQQEIFANHLIHST---FADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEG 150 (392)
Q Consensus 74 ~~~~~la~~L~~~~---~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~ 150 (392)
+...+|+++|++.. +++||+|+||||||||+|||+||+|+...|+|+|++||+|+++|||+|++++++|++..++++
T Consensus 86 ~~~~~la~~L~~~~~p~~~~rv~f~~SGseA~E~AiKlAr~y~~~~g~~~r~~Ii~~~~syHG~t~g~~s~sg~~~~~~~ 165 (448)
T PRK07481 86 PRAIELSYKLIDMFEPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRN 165 (448)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 89999999999851877878899749779999999999999999718988636996368637766221214688434468
Q ss_pred CCCCCCCCCCCCC--------HH---------HHHHHHHC----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 9986433322210--------02---------68875410----123322223332222112462101232211022345
Q gi|254780432|r 151 FGPKIEGFDQAKF--------CD---------LQSLKNQI----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDI 209 (392)
Q Consensus 151 ~~p~~~~~~~~~~--------~d---------~~~l~~~~----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~ 209 (392)
|+|..+++.+++. ++ .+.+++.+ +++|||||+|||||++|+++||++||++||++|++|
T Consensus 166 ~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~le~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~yl~~lr~lc~~~ 245 (448)
T PRK07481 166 YEPLLPGCFHVETPWLYRNPFTQDPEELGRLCARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANYWPLVREVCDRH 245 (448)
T ss_pred CCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHC
T ss_conf 88999982782687522377789989999999999999987418884799996046667971459999999999999977
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCC
Q ss_conf 721310110034444555310111245453021034444443-443210001112222233-------223453211110
Q gi|254780432|r 210 DALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQG-------SHGSTYGGNVLA 281 (392)
Q Consensus 210 g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~-------~~~~T~~gnpl~ 281 (392)
|++||+|||||||||||+||++|++||+|||+|+||+||||| |+||+++++++++.+.+. .|++||+|||++
T Consensus 246 gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~lggG~~Plsa~~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla 325 (448)
T PRK07481 246 GILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGISSGYVPLGATMVNARIEDAFEANADFGGAIMHGYTYSGHPVA 325 (448)
T ss_pred CEEEEEEECCCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 92799951453888476325765689999710012243589776421115689999765688766521006677889799
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC-------------HHHHHHHH
Q ss_conf 01233455432012221011210000268899998867970755046400999872499-------------89999999
Q gi|254780432|r 282 MVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS-------------PALLAAKF 348 (392)
Q Consensus 282 ~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~-------------~~~~~~~l 348 (392)
||||+++|++++++++++|++++|++|+++|++++++|| ++.+|||+|+|+++|++.+ ...+...+
T Consensus 326 ~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~VRG~Glm~~ielv~d~~~~~~~~~~~~~~~~v~~~~ 404 (448)
T PRK07481 326 CAAALASLDIVVREDLPANAAKRGAYLLEGLQPLVERFE-LVGDVRGKGLMVALDLVADKATRAPIDPSKGYANAVADVA 404 (448)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC-CEEEEEECCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 999999999997556999999999999999999998489-8467552249999999606655676771279999999999
Q ss_pred HHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9689899626898899558986889999999999999999852
Q gi|254780432|r 349 RDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 349 ~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+++|+++.+.+ |.++|.|||+||++|||+++++|+++|.+|.
T Consensus 405 ~~~Gll~~~~g-~~i~~~PpL~it~~eid~~l~~l~~al~~v~ 446 (448)
T PRK07481 405 RENGVLVRPSG-TKIILSPPLVIQREDVDRIVDALDAGFAAVP 446 (448)
T ss_pred HHCCEEEEECC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 96994997249-9899989978899999999999999999753
No 28
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=0 Score=760.88 Aligned_cols=386 Identities=26% Similarity=0.428 Sum_probs=346.8
Q ss_pred CCCEECCCCCC-------CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC--CCCCC
Q ss_conf 43145155888-------8748985010379967997646410226743578789999999999997314506--87578
Q gi|254780432|r 3 KNDFLFNTYDQ-------SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS--NLYQS 73 (392)
Q Consensus 3 ~~~~~~~~~~~-------~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~--~~~~~ 73 (392)
+++|+||.|.+ .|++|+||+|+|+||.|||+||||+||+|++++||+||+|++|+++|++++++.+ ..+.+
T Consensus 12 d~~~~whp~~~~~~~~~~~P~vi~rg~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~i~~Ai~~Q~~~~~~~~~~~~~~~ 91 (460)
T PRK06105 12 DIAYQLHPYTNARRHEEVGPLVIERGEGVYVYDDAGKRYIEGMAGLWSVAVGFSEQRLVEAAARQMKKLPFYHTFSHKSH 91 (460)
T ss_pred HHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCC
T ss_conf 88613289888331367899679960418899799999999762387510267999999999999965786012587678
Q ss_pred HHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 189999986520101--333123565554035677766543200134786002343546565432123455321134799
Q gi|254780432|r 74 TQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGF 151 (392)
Q Consensus 74 ~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~ 151 (392)
+...+||++|++..| ++||+|++|||||||+|||+||+|+..+|.|+|++||+|++||||+|++++|+|+.+..++.|
T Consensus 92 ~~~~~lAe~L~~~~p~~l~~v~f~~sGSEAvE~AlKlA~~y~~a~g~~~r~~iis~~~syHG~T~ga~s~tg~~~~~~~~ 171 (460)
T PRK06105 92 GPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLIWYYNNALGRPEKKKIISRKRGYHGVTIASASLTGLPNNHRSF 171 (460)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCC
T ss_conf 89999999999737888487998377088999999999999996389886369972376366504455420895335566
Q ss_pred CCCCCCCCCCCCHH------------------HHHHHHHC----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 98643332221002------------------68875410----123322223332222112462101232211022345
Q gi|254780432|r 152 GPKIEGFDQAKFCD------------------LQSLKNQI----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDI 209 (392)
Q Consensus 152 ~p~~~~~~~~~~~d------------------~~~l~~~~----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~ 209 (392)
++..+++.+.++++ ++.+++.+ +++|||||+|||||++|+++||++||+++|++||+|
T Consensus 172 ~~~~~~~~~~~~P~~~r~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAavIvEPiqg~gG~~~~p~~yl~~lr~lc~~~ 251 (460)
T PRK06105 172 DLPIDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKY 251 (460)
T ss_pred CCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 89988804467884346688887889999999999999998519885679983672488887269868989999999856
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCC
Q ss_conf 721310110034444555310111245453021034444443-44321000111222223-------3223453211110
Q gi|254780432|r 210 DALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQ-------GSHGSTYGGNVLA 281 (392)
Q Consensus 210 g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~-------~~~~~T~~gnpl~ 281 (392)
|++||+|||||||||||+||++|++||+|||+|+||+||||| |+||+++++++++.+.+ ..|++||+|||++
T Consensus 252 gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKglggG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla 331 (460)
T PRK06105 252 DILLVADEVICGFGRTGNMFGCETFGIKPDILVLSKQLTSSYQPLSAVLINERVYDPIADESGKIGTFGHGFTASGHPVA 331 (460)
T ss_pred CCEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 97799335411787333761220587378745661123578775048842388987650366666665325689999899
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH-------------HHHHHHH
Q ss_conf 012334554320122210112100002688999988679707550464009998724998-------------9999999
Q gi|254780432|r 282 MVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-------------ALLAAKF 348 (392)
Q Consensus 282 ~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-------------~~~~~~l 348 (392)
||||+++|++|+++++++|++++|++|+++|++|+ +|| .|.+|||+|+|++||++.++ ..+.+++
T Consensus 332 ~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~-~~p-~i~~VRG~Gl~~gielv~~~~~~~~~~~~~~~~~~v~~~~ 409 (460)
T PRK06105 332 AAVALENLAIIEERDLVGNAAELGARFQDRLRALA-DHP-LVGEVRGVGLIAAVELVADKATKTPFDPPGAVGARANARA 409 (460)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-CCC-CEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999864899999999999999999862-699-7688851673999998516544556772079999999999
Q ss_pred HHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9689899626898899558986889999999999999999852
Q gi|254780432|r 349 RDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 349 ~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+++||++.+.+ |+|+|.|||+||++|||+++++|+++|.+++
T Consensus 410 ~~~Gll~~~~g-n~i~i~PPL~it~~eid~~~~~l~~aL~e~~ 451 (460)
T PRK06105 410 HEHGVISRAMG-DTLAFCPPLIITAAQVDEMVDRFGRALDDTA 451 (460)
T ss_pred HHCCCEEEECC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 97896893069-9899979924889999999999999999999
No 29
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=0 Score=760.90 Aligned_cols=378 Identities=43% Similarity=0.748 Sum_probs=353.4
Q ss_pred CCCEECCCC--CCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC-CCCHHHHHH
Q ss_conf 431451558--88874898501037996799764641022674357878999999999999731450687-578189999
Q gi|254780432|r 3 KNDFLFNTY--DQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNL-YQSTQQEIF 79 (392)
Q Consensus 3 ~~~~~~~~~--~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~-~~~~~~~~l 79 (392)
+++|+++.| .|+|++|+||+|+|+||.|||+||||++|+|++++||+||+|.+|+++|++++.+++.. +.++...+|
T Consensus 5 ~~~~~~~~~~~~~~P~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~l 84 (413)
T cd00610 5 DRKVLWHGYTVRPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVEL 84 (413)
T ss_pred HHHHCCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 44107788899999914998565999979979999967067644657898899999999997489725786688899999
Q ss_pred HHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 986520101--333123565554035677766543200134786002343546565432123455321134799986433
Q gi|254780432|r 80 ANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEG 157 (392)
Q Consensus 80 a~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~ 157 (392)
+++|++..| +++|+|+||||||||+|||+||+| |+|++||+++++|||+|.+++|+|+.+.++..+.|..++
T Consensus 85 a~~l~~~~p~~~~~v~f~~sGsEA~e~AiklAr~~------t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~ 158 (413)
T cd00610 85 AELLLALTPEGLDKVFFVNSGTEAVEAALKLARAY------TGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPG 158 (413)
T ss_pred HHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH------CCCCEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCC
T ss_conf 99999856998487998187779999999999997------399889998688478766334413783224577888899
Q ss_pred CCCCCCH-----------HHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC
Q ss_conf 3222100-----------268875410---12332222333222211246210123221102234572131011003444
Q gi|254780432|r 158 FDQAKFC-----------DLQSLKNQI---SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG 223 (392)
Q Consensus 158 ~~~~~~~-----------d~~~l~~~~---~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 223 (392)
+.++|++ |++++++.+ .++|||||+|||||++|+++||++||++||++|++||++||+||||||||
T Consensus 159 ~~~~p~~~~~~~~~~~~~d~~~l~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfG 238 (413)
T cd00610 159 VLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFG 238 (413)
T ss_pred CEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEECCCEEEEEECEECCC
T ss_conf 66808987655543227789999999973899789999979878899873888997888632860580698520200777
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
Q ss_conf 45553101112454530210344444434432100011122222--3322345321111001233455432012221011
Q gi|254780432|r 224 RTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMN--QGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENV 301 (392)
Q Consensus 224 RtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~--~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~ 301 (392)
|||+||++|++||+|||+|+||+||||||+|||+++++|++.+. +..|++||+|||++||||+++|++++++++++|+
T Consensus 239 RtG~~~a~~~~gv~PDivt~gK~lggG~Pisav~~~~~i~~~~~~~~~~h~~T~~gnp~~~Aaa~a~L~~i~~e~l~~~~ 318 (413)
T cd00610 239 RTGKMFAFEHFGVEPDIVTLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENA 318 (413)
T ss_pred CCCCCCHHHHCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 54543123325817875652334568898604777599999863388506778888849999999999998425699999
Q ss_pred HHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH----------HHHHHHHHHCCEEEEECCCCEEEECCCCCC
Q ss_conf 2100002688999988679707550464009998724998----------999999996898996268988995589868
Q gi|254780432|r 302 INIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP----------ALLAAKFRDECLLTAPSSDNVVRILPPLTI 371 (392)
Q Consensus 302 ~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------~~~~~~l~~~Gll~~~~~~~~irl~Ppl~i 371 (392)
+++|++|+++|++++++|| ++.+|||.|+|+++|++.++ ..+.+.++++||++.+.++|+|+|.|||+|
T Consensus 319 ~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~l~~~Ppl~i 397 (413)
T cd00610 319 AELGEYLRERLRELAEKHP-LVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLII 397 (413)
T ss_pred HHHHHHHHHHHHHHHHHCC-CCEEEEEECEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCC
T ss_conf 9999999999999997489-936964324499999936877677589999999999997994891179998999788368
Q ss_pred CHHHHHHHHHHHHHHH
Q ss_conf 8999999999999999
Q gi|254780432|r 372 TAEEIHEGLERIERTA 387 (392)
Q Consensus 372 t~~eid~~i~~l~~al 387 (392)
|++|||+++++|+++|
T Consensus 398 t~~eid~~~~~l~~aL 413 (413)
T cd00610 398 TEEEIDEGLDALDEAL 413 (413)
T ss_pred CHHHHHHHHHHHHHHC
T ss_conf 9999999999999869
No 30
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=760.90 Aligned_cols=380 Identities=32% Similarity=0.552 Sum_probs=344.8
Q ss_pred CEECCCCC-CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHHH
Q ss_conf 14515588-8874898501037996799764641022674357878999999999999731450687-578189999986
Q gi|254780432|r 5 DFLFNTYD-QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNL-YQSTQQEIFANH 82 (392)
Q Consensus 5 ~~~~~~~~-~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~-~~~~~~~~la~~ 82 (392)
+-+.++|+ ++|++|+||+|+||||.|||+||||+||+|+++|||+||+|.+|+++|++++.|+... +.++...+|+++
T Consensus 10 ~~~~~~~~~~~pi~i~raeG~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~ 89 (422)
T PRK07495 10 AAISRGVGMTTQIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPKVIAAVKAQLDRFTHTCHQVVPYENYVRLAER 89 (422)
T ss_pred HHCCCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 75278778899879995503989989889999926088976345797999999999985466755665465799999999
Q ss_pred HHHHCCC---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 5201013---3312356555403567776654320013478600234354656543212345532-11347999864333
Q gi|254780432|r 83 LIHSTFA---DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK-LQYLEGFGPKIEGF 158 (392)
Q Consensus 83 L~~~~~~---~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~-~~~~~~~~p~~~~~ 158 (392)
|.+..|. ++++|++|||||||+|||+||.+ |+|++||+|+++|||+|++++++|++ ..++.+|+|.++++
T Consensus 90 L~~~~p~~~~~~~~F~~SGsEAvE~AiKlAr~~------tgr~~iis~~~~yHG~T~~a~s~tg~~~~~~~~~~~~~~~~ 163 (422)
T PRK07495 90 LNALVPGDFEKKTIFVTTGAEAVENAVKIARAA------TGRSAVIAFGGGFHGRTFMGMALTGKVVPYKVGFGAMPPDV 163 (422)
T ss_pred HHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHC------CCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 997568774547997278625999999975652------79987999878877864212431388765435678899993
Q ss_pred CCCCCHH----------HHHHHHHC-----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC
Q ss_conf 2221002----------68875410-----12332222333222211246210123221102234572131011003444
Q gi|254780432|r 159 DQAKFCD----------LQSLKNQI-----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG 223 (392)
Q Consensus 159 ~~~~~~d----------~~~l~~~~-----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 223 (392)
.+.|++. ++.+++.+ +++|||||+|||||++|+++||++||+++|++|++||++||+||||||||
T Consensus 164 ~~~p~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAvIvEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TGfG 243 (422)
T PRK07495 164 FHVPFPVELHGVSVDQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFA 243 (422)
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCCCCCC
T ss_conf 67078832357766779999999987516877578999667647888663888999999999987396687763010887
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 45553101112454530210344444434432100011122222332234532111100123345543201222101121
Q gi|254780432|r 224 RTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVIN 303 (392)
Q Consensus 224 RtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~ 303 (392)
|||+||++|++||+|||+|+||+||||||+|||+++++|++.+.++.|++||+|||++||||+++|++++++++++|+++
T Consensus 244 RtG~~fa~e~~gv~PDiv~~gKgl~gG~Pl~av~~~~~i~~~~~~~~~~~Tf~Gnpla~aaa~a~L~i~~~~~l~~~~~~ 323 (422)
T PRK07495 244 RTGKLFAMEHHEVAADLTTMAKSLAGGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQ 323 (422)
T ss_pred CCCCCHHHHCCCCCCCEEEECHHHHCCCCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 66550265448999809996415428875168887399883558888666799898999999999999986489999999
Q ss_pred HCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC---------HHHHHHHHHHCCEEEEECC--CCEEEECCCCCCC
Q ss_conf 0000268899998867970755046400999872499---------8999999996898996268--9889955898688
Q gi|254780432|r 304 IAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS---------PALLAAKFRDECLLTAPSS--DNVVRILPPLTIT 372 (392)
Q Consensus 304 ~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~---------~~~~~~~l~~~Gll~~~~~--~~~irl~Ppl~it 372 (392)
+|++|+++|++++++|| .+.+|||+|||+++|+..+ ...+..+++++|+++.+.+ +|+|||.|||+||
T Consensus 324 ~g~~l~~~L~~l~~~~p-~v~dvRG~GLm~giel~~~~~~~p~~~~~~~v~~~~~~~Gll~~~~g~~~nvi~~~PPL~it 402 (422)
T PRK07495 324 LGNRLKQRLASIRETVP-EIADIRGPGFMNAVEFNDADTGLPSAEFANRVRLEALEKGLILLTCGVHGNVIRFLAPITIQ 402 (422)
T ss_pred HHHHHHHHHHHHHHCCC-CEEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCC
T ss_conf 99999999999985499-88988624569999983388889788999999999997798898348899989997990257
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999852
Q gi|254780432|r 373 AEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 373 ~~eid~~i~~l~~al~~L~ 391 (392)
+++||+++++|+++|.|+.
T Consensus 403 ~~eid~~~~~l~~aL~E~~ 421 (422)
T PRK07495 403 DEVFGEALDILEASILEAR 421 (422)
T ss_pred HHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999999960
No 31
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=0 Score=760.21 Aligned_cols=386 Identities=29% Similarity=0.493 Sum_probs=348.3
Q ss_pred CCCEECCCC------CCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCHH
Q ss_conf 431451558------8887489850103799679976464102267435787899999999999973145068-757818
Q gi|254780432|r 3 KNDFLFNTY------DQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQSTQ 75 (392)
Q Consensus 3 ~~~~~~~~~------~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~~ 75 (392)
+++|+||.| ++.|++|+||+|+||||.|||+||||+||+|++|+||+||+|++|+++|++++.+++. .+.++.
T Consensus 10 d~~~~w~p~t~~~~~~~~P~~i~~g~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~i~~Ai~~q~~~l~~~~~~~~~~~~ 89 (441)
T PRK13360 10 DLSAFWMPFTANRQFKKAPRLLVAAKGMYYTSHDGRRVLDGTAGLWCVNAGHGRDEIVEAVRAQAGELDYAPTFQMGHPK 89 (441)
T ss_pred CHHHCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 36442789999744478996489865388996999999996533886400779799999999998655873467678779
Q ss_pred HHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999986520101--33312356555403567776654320013478600234354656543212345532113479998
Q gi|254780432|r 76 QEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGP 153 (392)
Q Consensus 76 ~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p 153 (392)
..+||++|++..| ++||+|++|||||||+|||+||+|++..|+++|++||+++++|||+|++++|+++...++..|+|
T Consensus 90 ~~~lae~L~~~~p~~l~~v~f~~SGsEA~E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~t~ga~s~sg~~~~~~~~~~ 169 (441)
T PRK13360 90 AFELATRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGQGQRTRLIGRERGYHGVGFGGISVGGIAPNRKAFGA 169 (441)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999985788868799848789999999999999988609987228993278627988465535588754456778
Q ss_pred CCCCCCCCCCHH------------------HHHHHHHC----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 643332221002------------------68875410----12332222333222211246210123221102234572
Q gi|254780432|r 154 KIEGFDQAKFCD------------------LQSLKNQI----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDA 211 (392)
Q Consensus 154 ~~~~~~~~~~~d------------------~~~l~~~~----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~ 211 (392)
..+++.++|++. .+.+++.+ +++|||||+|||||++|+++||++||+++|++|++||+
T Consensus 170 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAAii~EPiqg~gG~~~~p~~yl~~lr~lc~~~gi 249 (441)
T PRK13360 170 LLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGI 249 (441)
T ss_pred CCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 89985135887642224334575256799999999999854988579999777667789523899999999999863595
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC-CCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCHH
Q ss_conf 131011003444455531011124545302103444444-3443210001112222233-------22345321111001
Q gi|254780432|r 212 LLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGG-FPIGACLATNEVAACMNQG-------SHGSTYGGNVLAMV 283 (392)
Q Consensus 212 llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG-~P~sav~~~~~i~~~~~~~-------~~~~T~~gnpl~~a 283 (392)
+||+|||||||||||+||++|++|++|||+|+||+|+|| +|+|+++++++|++.+.++ .|++||+|||++|+
T Consensus 250 llI~DEV~tG~GRTG~~fa~e~~gv~PDiv~~gKgl~gG~~Plsav~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnplaca 329 (441)
T PRK13360 250 LLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACA 329 (441)
T ss_pred EEEECCCCCCCCCCCCCCEECCCCCCCCEEEECCHHHCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 57720131268623567100168987878997723217873432255249999743369755542113677788989999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC-------HHHHHHHHHHCCEEEE
Q ss_conf 233455432012221011210000268899998867970755046400999872499-------8999999996898996
Q gi|254780432|r 284 LGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS-------PALLAAKFRDECLLTA 356 (392)
Q Consensus 284 aa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~-------~~~~~~~l~~~Gll~~ 356 (392)
||+++|++|+++++++|++++|++|+++|+++.+ ++. +.+|||+|||+++|++.. ...+..+++++|+++.
T Consensus 330 aa~a~L~~i~~e~l~~~~~~~g~~l~~~L~~l~~-~~~-v~~VRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~Gll~~ 407 (441)
T PRK13360 330 AALATLDLYEREGLLTRAARLAPYWEDALHSLRD-APH-VIDIRNLGLVGGIELAPRDGKPGKRAYEVFLKCFEKGLMIR 407 (441)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC-CCC-EEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEE
T ss_conf 9999999999748899999999999999998624-998-68851554899999978888654899999999996994993
Q ss_pred ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 26898899558986889999999999999999852
Q gi|254780432|r 357 PSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 357 ~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+.+ |+|||.|||+||++|||+++++|+++|+|++
T Consensus 408 ~~g-n~irl~PPL~it~~eid~~~~~l~~aL~e~a 441 (441)
T PRK13360 408 YTG-DILALSPPLIIEEAQIDELFDIVAQALKETA 441 (441)
T ss_pred CCC-CEEEEECCEECCHHHHHHHHHHHHHHHHHHC
T ss_conf 179-9899989920889999999999999999569
No 32
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=0 Score=758.87 Aligned_cols=387 Identities=30% Similarity=0.509 Sum_probs=347.9
Q ss_pred CCCCEECCCCCC------CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCH
Q ss_conf 843145155888------87489850103799679976464102267435787899999999999973145068-75781
Q gi|254780432|r 2 NKNDFLFNTYDQ------SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQST 74 (392)
Q Consensus 2 ~~~~~~~~~~~~------~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~ 74 (392)
++++|+||.|.+ .|++|+||+|+||||.|||+||||+||+|++++||+||+|++|+++|++++.+.+. .+.++
T Consensus 13 ~d~~~~whp~~~~~~~~~~P~vi~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~i~~Ai~~Q~~~l~~~~~~~~~~~ 92 (445)
T PRK09221 13 NDLDAHWMPFTANRQFKAAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHP 92 (445)
T ss_pred CCHHHCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 62866388999962226799559970539899699899999672687411478979999999999865687245556888
Q ss_pred HHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999986520101--3331235655540356777665432001347860023435465654321234553211347999
Q gi|254780432|r 75 QQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFG 152 (392)
Q Consensus 75 ~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~ 152 (392)
...+|+++|++..| ++||+|+||||||||+|||+||+|+...|.++|++||++++||||+|++++|+++...+++.|+
T Consensus 93 ~~~~lae~L~~~~p~~l~~v~f~~SGsEAvE~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~t~g~~s~~g~~~~~~~f~ 172 (445)
T PRK09221 93 LAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFG 172 (445)
T ss_pred HHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999998488875879960878999999999999999971999752696203774799722000268854343567
Q ss_pred CCCCCCCCCCCHH------------------HHHHHHHC----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 8643332221002------------------68875410----1233222233322221124621012322110223457
Q gi|254780432|r 153 PKIEGFDQAKFCD------------------LQSLKNQI----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDID 210 (392)
Q Consensus 153 p~~~~~~~~~~~d------------------~~~l~~~~----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g 210 (392)
|..+++.++|+.. .+.+++.+ +++|||||+|||||++|+++||++||++||++|++||
T Consensus 173 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~a~~le~~i~~~~~~~iAaviiEPiqg~gG~~~~~~~yl~~lr~lc~~~g 252 (445)
T PRK09221 173 GLLPGVDHLPHTLDLPENAFSKGLPEHGAELADELERLVALHDASNIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHG 252 (445)
T ss_pred CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 88999447168766654334567606789999999999985398766899977755778714188899999999987558
Q ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC-CCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCH
Q ss_conf 2131011003444455531011124545302103444444-3443210001112222233-------2234532111100
Q gi|254780432|r 211 ALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGG-FPIGACLATNEVAACMNQG-------SHGSTYGGNVLAM 282 (392)
Q Consensus 211 ~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG-~P~sav~~~~~i~~~~~~~-------~~~~T~~gnpl~~ 282 (392)
++||+|||||||||||+||++|++||+|||+|+||+|+|| +|+||++++++|++.+.++ .|++||+|||++|
T Consensus 253 illI~DEVqtG~GRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Plsav~~~~ei~d~~~~~~~~~~~~~hg~T~~gnpla~ 332 (445)
T PRK09221 253 ILLIFDEVITGFGRLGAAFAAERFGVTPDLITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSGHPVAC 332 (445)
T ss_pred EEEEEECCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 48998415317881357612405767998677634356787754899965789997603875553233466788898999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC---H----HHHHHHHHHCCEEE
Q ss_conf 1233455432012221011210000268899998867970755046400999872499---8----99999999689899
Q gi|254780432|r 283 VLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS---P----ALLAAKFRDECLLT 355 (392)
Q Consensus 283 aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~---~----~~~~~~l~~~Gll~ 355 (392)
+||+++|++|+++++++|++++|++|+++|++|++ +|. |.+|||+|+|+++|+... + ..+...++++|+++
T Consensus 333 aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~L~~-~~~-v~dVRG~Glm~giel~~~~~~~~~~~~~~~~~~~~~Gll~ 410 (445)
T PRK09221 333 AAGLATLDIYREEDLFERAAELAPYFEDAVHSLKG-LPH-VIDIRNYGLVAGIELAPRPGAPGKRGYEAFMKCFEKGLLV 410 (445)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC-CCC-EEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEE
T ss_conf 99999999998646999999999999999998626-997-5987504089999985788855578999999999699289
Q ss_pred EECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 626898899558986889999999999999999852
Q gi|254780432|r 356 APSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 356 ~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
.+.+ |+|||+|||+||++|||+++++|+++|.+|+
T Consensus 411 ~~~g-~~lrl~PPL~it~~eid~~~~~l~~al~~va 445 (445)
T PRK09221 411 RYTG-DTIALSPPLIIEKAQIDELVDALGDALRAVA 445 (445)
T ss_pred EECC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 6379-9799989934899999999999999999869
No 33
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=0 Score=759.65 Aligned_cols=387 Identities=30% Similarity=0.528 Sum_probs=348.5
Q ss_pred CCCEECCCCCC-------CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC-CCCH
Q ss_conf 43145155888-------874898501037996799764641022674357878999999999999731450687-5781
Q gi|254780432|r 3 KNDFLFNTYDQ-------SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNL-YQST 74 (392)
Q Consensus 3 ~~~~~~~~~~~-------~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~-~~~~ 74 (392)
+++|+||.|.+ .|++|+||+|+||||.|||+|||++||+|++++||+||+|++|+++|++++.|.... +.++
T Consensus 22 d~~~~whp~t~~~~~~~~~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~~~~~~~~~~~ 101 (462)
T PRK06916 22 NKAYVWHPFTQMKDYLEEDPVIIERGEGRKLYDVNGNEYWDGVSSIWLNVHGHRVPELDEAIREQLNKIAHSTMLGLANV 101 (462)
T ss_pred HHHHCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 88553588877442378999489973518899799999988463377403568969999999999866568567776778
Q ss_pred HHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999986520101--3331235655540356777665432001347860023435465654321234553211347999
Q gi|254780432|r 75 QQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFG 152 (392)
Q Consensus 75 ~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~ 152 (392)
...+||++|++..| .++|+|+||||||||+|||+||+|+..+|.|+|++||+|++||||+|++++|+++...++..|+
T Consensus 102 ~~~~LAe~L~~~~p~~~~~v~f~~SGseA~E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~T~ga~s~s~~~~~~~~~~ 181 (462)
T PRK06916 102 PSILLAEKLIEVVPEGLKKVFYSDSGSSAVEIAIKMAFQYWQHKGKPKKQRFVTLKEAYHGDTIGAVSVGAIDLFHQVYS 181 (462)
T ss_pred HHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 89999999998577554879954974999999999999999982888763799836885877520010467411357777
Q ss_pred CCCCCCCCCCCHH-----------------HHHHHH---HCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 8643332221002-----------------688754---1012332222333-222211246210123221102234572
Q gi|254780432|r 153 PKIEGFDQAKFCD-----------------LQSLKN---QISNDTAAILIEP-IQGEGGVRKVPEEFLQQLRKICDDIDA 211 (392)
Q Consensus 153 p~~~~~~~~~~~d-----------------~~~l~~---~~~~~iAavi~Ep-v~g~~G~~~~~~~~l~~l~~lc~~~g~ 211 (392)
|.+....+.|++. ++.+++ ..+++|||||+|| +||++|+++||++||++||++|++||+
T Consensus 182 ~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~iAaviiEP~iqg~gG~~~~p~~yl~~lr~lc~~~gi 261 (462)
T PRK06916 182 SLLFEAIKMPYPYTYRSPYGNDKEEIVKKHLEEMEELLKEKHEEIAAIIVEPLMQGAGGMITMPKGYLKGLRNLCTKYNV 261 (462)
T ss_pred CCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 87888467689975567678987899999999999999757997669999614457899657878999999999860597
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCC-------CCCCCCCCCCCCCCCHH
Q ss_conf 1310110034444555310111245453021034444443-443210001112222-------23322345321111001
Q gi|254780432|r 212 LLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACM-------NQGSHGSTYGGNVLAMV 283 (392)
Q Consensus 212 llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~-------~~~~~~~T~~gnpl~~a 283 (392)
+||+|||||||||||+||++|++||+|||+|+||+|+||| |+|+|+++++|++.+ .+..|++||+|||++||
T Consensus 262 llI~DEV~TGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~GnPla~A 341 (462)
T PRK06916 262 LFITDEVATGFGRTGKMFACEHENVTPDILTAGKGLTGGYLPIAITVTTDEIYNAFLGDYEEQKTFFHGHSYTGNPLGCA 341 (462)
T ss_pred CEECCCCCCCCCCCCCCCHHHCCCCCCCHHHHCHHCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 26725430278755671166427966883431211037877627997618988753166545666556777888879999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH-------------HHHHHHHHH
Q ss_conf 2334554320122210112100002688999988679707550464009998724998-------------999999996
Q gi|254780432|r 284 LGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-------------ALLAAKFRD 350 (392)
Q Consensus 284 aa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-------------~~~~~~l~~ 350 (392)
||+++|++|+++++++|++++|++|.++|++|.+ +| .|.+|||+|||+++|++.++ ..++..+++
T Consensus 342 aa~a~L~~i~~e~l~~~v~~~g~~l~~~L~~l~~-~~-~v~dVRG~Gl~~gielv~~~~~~~~~~~~~~~~~~i~~~~~~ 419 (462)
T PRK06916 342 VAIANLELYEKTNLIEQVARKTEYVATQLEDLFA-LK-HVGDIRQLGLMVGIELVKNKETKEPFPWTERVGVQVCKRSRE 419 (462)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC-CC-CEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999999999668899999999999999998626-99-858772477189999832665467785578999999999996
Q ss_pred CCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 898996268988995589868899999999999999998529
Q gi|254780432|r 351 ECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLSH 392 (392)
Q Consensus 351 ~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~~ 392 (392)
+|+++.+.+ |+|||.|||+||++|||+++++|+++|.+|..
T Consensus 420 ~Gll~~~~g-n~i~~~PPL~it~~eid~~~~il~~al~ev~~ 460 (462)
T PRK06916 420 LGMILRPLG-NTIVFMPPLASTIDELDEMLRILYKAISDVTE 460 (462)
T ss_pred CCEEEEECC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 994997449-99999899348899999999999999999977
No 34
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=0 Score=757.83 Aligned_cols=385 Identities=26% Similarity=0.423 Sum_probs=346.9
Q ss_pred CCCEECCCCCC------C-CEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCH
Q ss_conf 43145155888------8-7489850103799679976464102267435787899999999999973145068-75781
Q gi|254780432|r 3 KNDFLFNTYDQ------S-DIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQST 74 (392)
Q Consensus 3 ~~~~~~~~~~~------~-p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~ 74 (392)
+++|+||.|.+ . |++|+||+|+||||.|||+||||.||+|++++||+||+|++|+++|++++.+.+. .+.++
T Consensus 17 d~~~~whp~~~~~~~~~~ppi~I~rgeG~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Ql~~l~~~~~~~~~~~ 96 (452)
T PRK06943 17 SLRAVWHPCTQMKHHERLPLIPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHE 96 (452)
T ss_pred HHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 89652889888754367898489968028899798999998344389771357969999999999865747135776876
Q ss_pred HHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999986520101--3331235655540356777665432001347860023435465654321234553211347999
Q gi|254780432|r 75 QQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFG 152 (392)
Q Consensus 75 ~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~ 152 (392)
...+|+++|++..| +++|+|+||||||||+|||+||+|++.++.|+|++||+++++|||+|.+++++|+.+.++..|+
T Consensus 97 ~~~~lae~L~~~~p~~l~~v~f~~SGSEA~E~AiKlA~~~~~~rg~~~r~~ii~~~~syHG~T~ga~s~t~~~~~~~~~~ 176 (452)
T PRK06943 97 PAIELAERLAALTGHTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYD 176 (452)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEECCCCHHHCCCCC
T ss_conf 99999999997466655759960871899999999999999861899860587347886887630146268512033567
Q ss_pred CCCCCCCCCCCH-----------------HHHHHHH---HCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 864333222100-----------------2688754---1012332222333-222211246210123221102234572
Q gi|254780432|r 153 PKIEGFDQAKFC-----------------DLQSLKN---QISNDTAAILIEP-IQGEGGVRKVPEEFLQQLRKICDDIDA 211 (392)
Q Consensus 153 p~~~~~~~~~~~-----------------d~~~l~~---~~~~~iAavi~Ep-v~g~~G~~~~~~~~l~~l~~lc~~~g~ 211 (392)
|..+.+..++++ +++.+++ ...++|||||+|| +||++|+++||++||++||++|++||+
T Consensus 177 p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~iAAvivEP~iqg~gG~~~~~~~yl~~lr~lc~~~gi 256 (452)
T PRK06943 177 PLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYVRGLRALCDEYGV 256 (452)
T ss_pred CCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHCCC
T ss_conf 76777624589975567888877789999999999999856997789999575146796185889999999999864496
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCHHH
Q ss_conf 1310110034444555310111245453021034444443-443210001112222233------223453211110012
Q gi|254780432|r 212 LLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQG------SHGSTYGGNVLAMVL 284 (392)
Q Consensus 212 llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~------~~~~T~~gnpl~~aa 284 (392)
|||+|||||||||||+||++|++||+|||+|+||+|+||| |+|+|+++++|++.+.+. .|++||+|||++|||
T Consensus 257 LlI~DEV~tGfGRTG~~fa~e~~gv~PDiit~gKgl~gG~~Plsav~~~~ei~~~~~~~~~~~~~~h~~T~~GnplacAa 336 (452)
T PRK06943 257 HLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDEIFDAFYDDDTTRGFLHSHSYTGNPLACRA 336 (452)
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 48713320288645177102346998829997652128986531243038899864379976786757788988899999
Q ss_pred HHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH-------HHHHHHHHHCCEEEEE
Q ss_conf 334554320122210112100002688999988679707550464009998724998-------9999999968989962
Q gi|254780432|r 285 GEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-------ALLAAKFRDECLLTAP 357 (392)
Q Consensus 285 a~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-------~~~~~~l~~~Gll~~~ 357 (392)
|+++|++++++++++|++++|++|+++|++|. +|| .|.+|||+|||+++|++.+. +.+...++++|+++++
T Consensus 337 ala~L~~l~~e~l~~~~~~~g~~l~~~L~~l~-~~~-~V~dVRG~GL~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~ 414 (452)
T PRK06943 337 AVATLDLFARDDVLARNARKSALLRAALAPLA-AHP-QVRHLRQRGTIFAFDVALDGDAARTFSRRFFEHALERELLLRP 414 (452)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-CCC-CEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEE
T ss_conf 99999999865799999999999999999873-599-8888630758999996678764579999999999969928986
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 689889955898688999999999999999985
Q gi|254780432|r 358 SSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 358 ~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.+ |+|+++|||+||++|||+++++|+++|.++
T Consensus 415 ~g-~~i~l~PPL~it~~eid~~~~~L~~aL~~v 446 (452)
T PRK06943 415 IG-TTVYLMPPYVLDDEEIAWLAQRTRATLDAT 446 (452)
T ss_pred CC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 49-999997990388999999999999999999
No 35
>PRK07323 consensus
Probab=100.00 E-value=0 Score=757.22 Aligned_cols=379 Identities=40% Similarity=0.663 Sum_probs=344.8
Q ss_pred CCCEECCCC-CCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCHHHHHHH
Q ss_conf 431451558-888748985010379967997646410226743578789999999999997314506-875781899999
Q gi|254780432|r 3 KNDFLFNTY-DQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQSTQQEIFA 80 (392)
Q Consensus 3 ~~~~~~~~~-~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~~~~~~la 80 (392)
+++++.++| .|+|++|+||+|+||||.|||+||||+||+|++++||+||+|++|+++|++++.+.+ ..|.++...+||
T Consensus 28 ~~~~~~~~~~~p~P~vi~r~~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~la 107 (443)
T PRK07323 28 DEAVLSPSYTRPYPFVPARGEGCMLEDVDGNVFLDFTAGIAVTTTGHAHPHVVRAVQEQAERFAHVCGTDFYYEPTTSLA 107 (443)
T ss_pred HHHHCCCCCCCCCCEEEEEEECCEEEECCCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 98862878787888689973409899698899999250877443168989999999999975556554655778999999
Q ss_pred HHHHHHCC----CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 86520101----33312356555403567776654320013478600234354656543212345532-11347999864
Q gi|254780432|r 81 NHLIHSTF----ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK-LQYLEGFGPKI 155 (392)
Q Consensus 81 ~~L~~~~~----~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~-~~~~~~~~p~~ 155 (392)
++|++..+ ..||+|++|||||||+|||+||+| |+|++||+|+++|||+|++++++|++ ..++++|+|..
T Consensus 108 e~L~~~~~~~~~~~rv~f~~SGsEAvE~AiklAr~~------tgr~~iis~~~~yHG~T~ga~s~tg~~~~~~~~~~p~~ 181 (443)
T PRK07323 108 ERLVGHAPFPGEKWRVFFGNSGAESVEAAIKLARYH------TGRSHIIAFLGAFHGRTYGAMSLTGSKTVYRQGFGPLL 181 (443)
T ss_pred HHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHH------CCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCC
T ss_conf 999984789766568998377468999999999984------69987999707878987642431288300013568889
Q ss_pred CCCCCCCCHH-----------------HHHHHHHC-----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEE
Q ss_conf 3332221002-----------------68875410-----1233222233322221124621012322110223457213
Q gi|254780432|r 156 EGFDQAKFCD-----------------LQSLKNQI-----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALL 213 (392)
Q Consensus 156 ~~~~~~~~~d-----------------~~~l~~~~-----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~ll 213 (392)
+++.++|+++ ++.+++.+ .++|||||+|||||++|+++||++||+.+|++|++||++|
T Consensus 182 ~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~iAAvi~EPiqg~gG~~~pp~~yl~~lr~lc~~~~ill 261 (443)
T PRK07323 182 PGVSHIPYPNPFRPPLGSTPEECGHAVLDHLESLFQTVLPAEEVAAIVVEPIQGEGGYIVPPDGFLPRLRAICDRHGILL 261 (443)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 99067068763234346872678999999999999851789978999986877888985699899999999999849758
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 10110034444555310111245453021034444443443210001112222233223453211110012334554320
Q gi|254780432|r 214 IFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQ 293 (392)
Q Consensus 214 I~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~ 293 (392)
|+|||||||||||+||++|++|++|||+|+||+||||||+|||++++++++ +..+.|++||+|||++||||+++|++++
T Consensus 262 I~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKglg~G~Plsav~~~~~i~~-~~~g~h~~T~~gnpl~~aaa~a~L~iie 340 (443)
T PRK07323 262 VVDEVQAGMGRTGRLFAIEHWGVQPDIITLAKGIASGMPLGAILAREELMT-WPPGSHGTTFGGNPVAAAAAHATLDLLE 340 (443)
T ss_pred ECCCCCCCCCCCCCCCHHHCCCCCCCEEEECHHHCCCCCEEEEEECHHHHC-CCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 867423278866643020146978888987134328873189998578613-6567765365897489999999999998
Q ss_pred CCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH--------HHHHHHHHHCCEEEEECCCCEEEE
Q ss_conf 122210112100002688999988679707550464009998724998--------999999996898996268988995
Q gi|254780432|r 294 SDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP--------ALLAAKFRDECLLTAPSSDNVVRI 365 (392)
Q Consensus 294 ~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~--------~~~~~~l~~~Gll~~~~~~~~irl 365 (392)
+++++|++++|++|+++|++|.++|| +|.+|||+|||++||++.++ ..+.+.++++|+++.+.++++|||
T Consensus 341 -~~l~~~v~~~g~~l~~~L~~l~~~~p-~v~~vRG~GL~~giel~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~ir~ 418 (443)
T PRK07323 341 -GGLMENAARMGEFLLAELRQLQDRFP-FLGDVRGRGLMIGLDFVDPDGNPDGDLRDRAVRLAFEKGLLLLGCGKAAIRI 418 (443)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEEE
T ss_conf -77999999999999999999886099-7998731563999999548888488999999999997997998369998999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 5898688999999999999999985
Q gi|254780432|r 366 LPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 366 ~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+|||+||++|||+++++|+++|++|
T Consensus 419 ~PPL~is~~eid~~l~~l~~al~el 443 (443)
T PRK07323 419 CPPLVLTREEAATGLDILREVFREL 443 (443)
T ss_pred ECCEECCHHHHHHHHHHHHHHHHHC
T ss_conf 7891088999999999999999849
No 36
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=0 Score=757.05 Aligned_cols=386 Identities=28% Similarity=0.444 Sum_probs=344.3
Q ss_pred CCCEECCCCCC-------CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC--CC
Q ss_conf 43145155888-------8748985010379967997646410226743578789999999999997314506875--78
Q gi|254780432|r 3 KNDFLFNTYDQ-------SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLY--QS 73 (392)
Q Consensus 3 ~~~~~~~~~~~-------~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~--~~ 73 (392)
+++|+||.|.+ .|++|+||+|+||||.|||+||||+||+|++||||+||+|++|+++|++++++.++.+ .+
T Consensus 17 d~~~~~hp~t~~~~~~~~~p~vi~ra~G~yl~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~ 96 (459)
T PRK07480 17 DAAHHLHPFSDMKALNEKGSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAYRQMRELPYYNTFFKTTH 96 (459)
T ss_pred HHHHCCCCCCCCCCCCCCCCEEEEECEECEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 77401389888321046898699945208899699999998762487451688999999999999975577025545578
Q ss_pred HHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 189999986520101--333123565554035677766543200134786002343546565432123455321134799
Q gi|254780432|r 74 TQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGF 151 (392)
Q Consensus 74 ~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~ 151 (392)
+...+||++|++..| +++|+|++|||||||+|||+||+|+...|+|+|++||+|++||||+|++++|+++...++..+
T Consensus 97 ~~~~~lAe~L~~~~p~~l~~v~f~~SGsEA~E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~T~ga~s~sg~~~~~~~~ 176 (459)
T PRK07480 97 PPVIELAAKLAEVAPAGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVVISRKNGYHGSTVAGASLGGMKYMHEQG 176 (459)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCC
T ss_conf 89999999999848887587997087589999999999999997099987089994586466406666633884323456
Q ss_pred CCCCCCCCCCCCHH-----------------HHHHHHH----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 98643332221002-----------------6887541----01233222233322221124621012322110223457
Q gi|254780432|r 152 GPKIEGFDQAKFCD-----------------LQSLKNQ----ISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDID 210 (392)
Q Consensus 152 ~p~~~~~~~~~~~d-----------------~~~l~~~----~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g 210 (392)
++..+++.++++++ ++.+++. .+++|||||+|||||++|+++||++||++||++|++||
T Consensus 177 ~~~~~~~~~v~~P~~~~~~~~~~~~~~~~~~~~~le~~i~e~~~~~iAavi~EPi~g~gG~~~~p~~yl~~lr~lc~~~g 256 (459)
T PRK07480 177 DLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGAENVAAFIGEPIQGAGGVIIPPSTYWPEIQRICRKYD 256 (459)
T ss_pred CCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 88888856647987433467898678789999999999985088765787625524668842288899999999886439
Q ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCHHHH
Q ss_conf 21310110034444555310111245453021034444443-44321000111222223----32234532111100123
Q gi|254780432|r 211 ALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQ----GSHGSTYGGNVLAMVLG 285 (392)
Q Consensus 211 ~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~----~~~~~T~~gnpl~~aaa 285 (392)
++||+|||||||||||+||++|++||+|||+|+||+||||| |+|+|+++++|++.+.. ..|++||+|||++||||
T Consensus 257 iLlI~DEV~tGfGRTG~~fa~e~~gv~PDii~~gKglggG~~Pl~av~~~~~i~~~~~~~~~~~~hg~T~~Gnplacaaa 336 (459)
T PRK07480 257 ILLVADEVICGFGRTGEWFGHQHFGFEPDLMTIAKGLTSGYIPMGAVIVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVA 336 (459)
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 77999735328875545423567798886898752002898773699873899987611787542477899997999999
Q ss_pred HHHHHHHHCCCCCCHHH-HHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCHH-------------HHHHHHHHC
Q ss_conf 34554320122210112-1000026889999886797075504640099987249989-------------999999968
Q gi|254780432|r 286 EKVLNIIQSDGFLENVI-NIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSPA-------------LLAAKFRDE 351 (392)
Q Consensus 286 ~a~L~~l~~~~l~~~~~-~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~-------------~~~~~l~~~ 351 (392)
+++|++++++++++|++ ++|++|+++|++|+ +|| .+.+|||+|||++||++.++. .+...++++
T Consensus 337 la~L~~i~~~~l~~~~~~~~g~~l~~~l~~L~-~~p-~i~~vRG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (459)
T PRK07480 337 LANLRILRDEGIVERVRTDTGPYLQKRLRELA-DHP-LVGEVRGVGLVGALELVKDKATRERFAAGGGVGTICRDHCFNN 414 (459)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-CCC-CEEEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 99999986162999999999999999999851-599-6877230552899997437443445663368999999999979
Q ss_pred CEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9899626898899558986889999999999999999852
Q gi|254780432|r 352 CLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 352 Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
|+++.+.+ |.|++.|||+||++|||+++++|+++|.++.
T Consensus 415 Gll~~~~g-n~l~l~PPL~it~~eid~~l~~l~~aL~~~~ 453 (459)
T PRK07480 415 GLIMRAVG-DRMILSPPLVISRAEIDELVEKARKALDLTA 453 (459)
T ss_pred CEEEEECC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 94996169-9899978823889999999999999999999
No 37
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=756.95 Aligned_cols=381 Identities=30% Similarity=0.473 Sum_probs=341.3
Q ss_pred CCEECCCCC--CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC-CHHHHHHH
Q ss_conf 314515588--887489850103799679976464102267435787899999999999973145068757-81899999
Q gi|254780432|r 4 NDFLFNTYD--QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQ-STQQEIFA 80 (392)
Q Consensus 4 ~~~~~~~~~--~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~-~~~~~~la 80 (392)
.+|+.+.+. -+|++|+||+|+||||.|||+||||.||+|+++|||+||+|++|+++|++++.+.+..+. +....+|+
T Consensus 11 ~~~~~~~~~~~~~Pivi~raeG~~l~D~dG~~yLD~~sg~~~~~lGH~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~la 90 (443)
T PRK08360 11 SKVIAPANRVTYYPLVPVRAENAKVWDIEGKEYIDFLSDAAVQNVGHNNPRVVKAIKEQADKLIHASYIYAFPVEPLLLA 90 (443)
T ss_pred HHHCCCCCCCCCCCCCEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 98528876776279817961449899697699888122578642437969999999999863687357755764899999
Q ss_pred HHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 865201013--331235655540356777665432001347860023435465654321234553211347999864333
Q gi|254780432|r 81 NHLIHSTFA--DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGF 158 (392)
Q Consensus 81 ~~L~~~~~~--~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~ 158 (392)
++|++..|. +|++|++|||||||+|||+||+| |+|++||+++++|||+|++++|+|+.....+.+.+..+++
T Consensus 91 e~L~~~~p~~~~~v~f~~SGSEAvE~AlKlAr~~------tgr~~ii~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~ 164 (443)
T PRK08360 91 EKLAEIAPIDNPKVSFGLSGGDANDGAIKFARAY------TKRRKILSYMRSYYGSTYGAMSLTGLDFEVRAIVGELSDV 164 (443)
T ss_pred HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH------CCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 9999857998675997486788999999998876------2997387404665768601033137754545567899996
Q ss_pred CCCCCHH-----------------HHHHHHHC-----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 2221002-----------------68875410-----1233222233322221124621012322110223457213101
Q gi|254780432|r 159 DQAKFCD-----------------LQSLKNQI-----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFD 216 (392)
Q Consensus 159 ~~~~~~d-----------------~~~l~~~~-----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 216 (392)
.++|+++ ++.+++.+ .++|||||+|||||++|+++||++||++||++|++||++||+|
T Consensus 165 ~~vp~p~~~r~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAviiEPvqG~gG~~~pp~~yl~~lr~lc~~~gillI~D 244 (443)
T PRK08360 165 HYIPYPNCYRCPFGKEPGSCKMECVEYLKEKFEGEVYAEGVAALFAEPIQGDSGMVVPPENYFKKVKKILDEHGILLVVD 244 (443)
T ss_pred EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 68179864357678885213699999999998620366875799986767888418688899768988777659079851
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 10034444555310111245453021034444443443210001112222233223453211110012334554320122
Q gi|254780432|r 217 EVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDG 296 (392)
Q Consensus 217 EV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~ 296 (392)
||||||||||+||++|++||+|||+|+||+|+||+|+||++++++|++.+.+..|++||+|||++||||+++|+++++++
T Consensus 245 EV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~~G~Pisav~~~~ei~~~~~~~~h~~T~~gnpl~caaa~a~L~~i~~~~ 324 (443)
T PRK08360 245 EVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLPPLSHAFTLSGNPTASRAALAVIEEIEEKD 324 (443)
T ss_pred CCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 13038765440557645796986577634445788862311149898504887656687899799999999999998635
Q ss_pred CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC----------HHHHHHHHHHCCEEEEECCCCEEEEC
Q ss_conf 21011210000268899998867970755046400999872499----------89999999968989962689889955
Q gi|254780432|r 297 FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS----------PALLAAKFRDECLLTAPSSDNVVRIL 366 (392)
Q Consensus 297 l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~----------~~~~~~~l~~~Gll~~~~~~~~irl~ 366 (392)
+++|++++|++|.++|++++++|| +|.+|||+|||+++|++.+ ...+..+++++|+++.+.++|+|||.
T Consensus 325 l~~~~~~~G~~l~~~L~~l~~~~p-~i~dVRG~Gl~~gie~v~d~~~~~~~~~~~~~i~~~~~~~Glli~~~~~~~i~~~ 403 (443)
T PRK08360 325 LLKRAEKLGNYTKKRLEEMKEKHE-LIGDVRGLGLMIGVDLVKDRETKERAYEETKKVVWRAFELGLIVTFFQGNVLRIE 403 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC-CEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEE
T ss_conf 999999999999999999887189-8885203646999998127765544579999999999968938811699989997
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8986889999999999999999852
Q gi|254780432|r 367 PPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 367 Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
|||+||++|||+++++|+++|.+|.
T Consensus 404 PPL~it~~eid~~~~~l~~al~ev~ 428 (443)
T PRK08360 404 PPLTIEEEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9912899999999999999999998
No 38
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=754.34 Aligned_cols=379 Identities=39% Similarity=0.655 Sum_probs=345.8
Q ss_pred CCCEECCCCC-CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCHHHHHHH
Q ss_conf 4314515588-88748985010379967997646410226743578789999999999997314506-875781899999
Q gi|254780432|r 3 KNDFLFNTYD-QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQSTQQEIFA 80 (392)
Q Consensus 3 ~~~~~~~~~~-~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~~~~~~la 80 (392)
+++|++++|. |+|++|+||+|+|+||.|||+|||+++|+|+++|||+||+|++|+++|++++.|.+ ..+.++..++|+
T Consensus 25 ~~~~~~~~~~~p~P~~i~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~Q~~~l~~~~~~~~~~~~~~ela 104 (442)
T PRK05769 25 DEKYLAQSTTRPYPLVIDRGEGVWVEDVDGNVYLDFNSGIAVTNVGHAHPKVVEAIKEQAEKFLHYSLTDFYYEPAVELA 104 (442)
T ss_pred HHHHCCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 87646898787898059973539899698699999254477413448979999999999861767456776888999999
Q ss_pred HHHHHHCCCC---CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC
Q ss_conf 8652010133---312356555403567776654320013478600234354656543212345532-113479998643
Q gi|254780432|r 81 NHLIHSTFAD---RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK-LQYLEGFGPKIE 156 (392)
Q Consensus 81 ~~L~~~~~~~---~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~-~~~~~~~~p~~~ 156 (392)
++|++..|.+ +++|++|||||||+|||+||.| |+|++||+|++||||+|++++++|++ +.++..|+|..+
T Consensus 105 e~L~~~~p~~~~~~v~f~~sGSEAvE~AiklAr~~------tgr~~ii~~~~syHG~t~ga~s~t~~~~~~~~~~~p~~p 178 (442)
T PRK05769 105 ERLVEIAPGGFPKKVFFTNSGTESNEAAIKLARYY------TGRKYIIAFLGAFHGRTYGSMSLTASKPVQRRGFFPLMP 178 (442)
T ss_pred HHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHH------CCCCEEEEECCCCCCCCHHHHHHCCCCHHHCCCCCCCCC
T ss_conf 99998578666757998186778999999998986------599869972486778863365320783011047789999
Q ss_pred CCCCCCCHH------------------HHHHHHHC------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE
Q ss_conf 332221002------------------68875410------123322223332222112462101232211022345721
Q gi|254780432|r 157 GFDQAKFCD------------------LQSLKNQI------SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDAL 212 (392)
Q Consensus 157 ~~~~~~~~d------------------~~~l~~~~------~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~l 212 (392)
++.++|+++ ++.+++.+ +++|||||+|||||++|+++||++||+++|++|++||++
T Consensus 179 ~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~l~~lc~~~gil 258 (442)
T PRK05769 179 GVIHVPYPNPYRNPFGYENPEELGNAVLDFIEDYLFKTLVPPEEVAAIFFEPIQGEGGYVVPPKNFFKELRKLADKYGIL 258 (442)
T ss_pred CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 92780789734565577898999999999999999873589897899999897778897068989998999999874935
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 31011003444455531011124545302103444444344321000111222223322345321111001233455432
Q gi|254780432|r 213 LIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNII 292 (392)
Q Consensus 213 lI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l 292 (392)
||+|||||||||||+||++|+||++|||+|+||+||||||+|+|++++++++ ..++.|++||+|||++||||+++|+++
T Consensus 259 lI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~lggG~Plsav~~~~~i~~-~~~g~h~~T~~g~pl~~aaa~a~L~~l 337 (442)
T PRK05769 259 LIVDEVQTGFGRTGKMFAIEHFGVEPDIITLAKAIAGGLPLGAVIGRAELMF-LPPGSHANTFGGNPVAAAAALATLELI 337 (442)
T ss_pred EECCCCCCCCCCCCCCCHHHCCCCCCCEEEECCHHCCCCCEEEEEECHHHHC-CCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 8711101277755662131046778888997401038874089998067503-777871518998679999999999999
Q ss_pred HCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH--------HHHHHHHHHCCEEEEECCCCEEE
Q ss_conf 0122210112100002688999988679707550464009998724998--------99999999689899626898899
Q gi|254780432|r 293 QSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP--------ALLAAKFRDECLLTAPSSDNVVR 364 (392)
Q Consensus 293 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~--------~~~~~~l~~~Gll~~~~~~~~ir 364 (392)
+ +++++|++++|++|+++|+++.++|| .+.+|||.|||++||++.+. ..+...++++|+++.+.++|+|+
T Consensus 338 e-e~l~~~v~~~G~~l~~~L~~l~~~~p-~v~~vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~i~ 415 (442)
T PRK05769 338 E-EGLLENAARLGEYLLKRLTELKEEYE-FIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLREAFKRGLLLLGAGKSAIR 415 (442)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEE
T ss_conf 8-88999999999999999999986299-867603434599999815777879999999999999699599317999799
Q ss_pred ECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 55898688999999999999999985
Q gi|254780432|r 365 ILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 365 l~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
|+|||+||++|||+++++|++++.+|
T Consensus 416 ~~PpL~it~~eid~~~~~l~~al~ev 441 (442)
T PRK05769 416 IIPPLVITEEEADTGLEILEEAIKEV 441 (442)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 97994699999999999999999986
No 39
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=0 Score=752.24 Aligned_cols=384 Identities=33% Similarity=0.543 Sum_probs=348.0
Q ss_pred CCCEECCCCC-----CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCHHH
Q ss_conf 4314515588-----88748985010379967997646410226743578789999999999997314506-87578189
Q gi|254780432|r 3 KNDFLFNTYD-----QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQSTQQ 76 (392)
Q Consensus 3 ~~~~~~~~~~-----~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~~~~ 76 (392)
|++|+||+|. +.|++|+||+|+||||.|||+||||++|+|++++||+||+|++|+++|++++.++. ..+.++..
T Consensus 8 d~~~~~~~~~~~~~~~~Pi~i~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~ 87 (421)
T PRK05964 8 DLSHVWHPYTQMKTHPPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPHIDAAIREQLDRLDHVMFAGFTHEPA 87 (421)
T ss_pred HHHHCCCCCCCCCCCCCCEEEEEEECCEEEECCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 87222589878878999857995353889979999999936068740268998999999999997578754687575899
Q ss_pred HHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999986520101--333123565554035677766543200134786002343546565432123455321134799986
Q gi|254780432|r 77 EIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPK 154 (392)
Q Consensus 77 ~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~ 154 (392)
++||++|++..| +++|+|+||||||||+|||+||+|+...| ++|++||+|+++|||+|++++|+++...++.++.|.
T Consensus 88 ~~lA~~L~~~~p~~~~~v~f~~SGsEA~e~AiKlA~~y~~~~g-~~r~~ii~~~~~yHG~T~~a~s~~~~~~~~~~~~~~ 166 (421)
T PRK05964 88 ERLAKRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRG-EPRSRFLSLRGGYHGDTLGTMSVGMHGLFNATYGPL 166 (421)
T ss_pred HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCC-CCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 9999999984787758799947813699999999999998639-975189997388689851343235753345788888
Q ss_pred CCCCCCCCCHH------HHHHHHHC---CCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 43332221002------68875410---12332222333-2222112462101232211022345721310110034444
Q gi|254780432|r 155 IEGFDQAKFCD------LQSLKNQI---SNDTAAILIEP-IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 155 ~~~~~~~~~~d------~~~l~~~~---~~~iAavi~Ep-v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
.+.+...++++ ++.+++.+ .++|||||+|| +||+||+++||++||+++|++|++||++||+|||||||||
T Consensus 167 ~~~~~~~~~p~~~~~~~~~~le~~~~~~~~~iAAvi~EP~iqg~GG~~~~p~~y~~~lr~lc~~~gillI~DEV~tGfGR 246 (421)
T PRK05964 167 LFQVLALPVPRDYEQAYLDALEALLEKHAGEIAAVIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGR 246 (421)
T ss_pred CCCCEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCC
T ss_conf 88876558998633889999999997479977899997884678997678889999998871006804651211026875
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCC------CCCCCCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 555310111245453021034444443-44321000111222223------32234532111100123345543201222
Q gi|254780432|r 225 TGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQ------GSHGSTYGGNVLAMVLGEKVLNIIQSDGF 297 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~------~~~~~T~~gnpl~~aaa~a~L~~l~~~~l 297 (392)
||+||++|++|++|||+|+||+|+||| |+|||+++++|++.+.. ..|++||+|||++||||+++|++++++++
T Consensus 247 tG~~fa~e~~gv~PDivt~gKgl~gG~~Pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l 326 (421)
T PRK05964 247 TGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFDAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPV 326 (421)
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH
T ss_conf 67887543002589878872203578762489998589997631678776400378888896999999999999964519
Q ss_pred CCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH-----HHHHHHHHHCCEEEEECCCCEEEECCCCCCC
Q ss_conf 10112100002688999988679707550464009998724998-----9999999968989962689889955898688
Q gi|254780432|r 298 LENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-----ALLAAKFRDECLLTAPSSDNVVRILPPLTIT 372 (392)
Q Consensus 298 ~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-----~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it 372 (392)
++|++++|++|+++|+++++ +| .|.+|||+|||+++|+..++ ..+..+++++|+++.+.+ |+|||+|||+||
T Consensus 327 ~~~~~~~g~~l~~~L~~l~~-~~-~I~dvRG~GL~~~ie~~~~~~~~~~~~i~~~~~~~Glli~~~g-n~ir~~PpL~it 403 (421)
T PRK05964 327 LERVAALSAGLTEGLEPFRD-LP-RVADVRVLGAIGAVELDRPDDGRIGPALTAAFLDRGVLLRPLG-NTIYLMPPYIIT 403 (421)
T ss_pred HHHHHHHHHHHHHHHHHHCC-CC-CEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECC-CEEEEECCCCCC
T ss_conf 99999999999999997435-99-7676410462999997257867999999999997890999669-999997893689
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999985
Q gi|254780432|r 373 AEEIHEGLERIERTAIKL 390 (392)
Q Consensus 373 ~~eid~~i~~l~~al~~L 390 (392)
++|||+++++|++++.||
T Consensus 404 ~~eid~~~~~l~~al~ev 421 (421)
T PRK05964 404 PEELARITDAIVEVADEL 421 (421)
T ss_pred HHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999629
No 40
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=752.21 Aligned_cols=382 Identities=39% Similarity=0.648 Sum_probs=347.3
Q ss_pred CCCEECCCCCC-CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCHHHHHHH
Q ss_conf 43145155888-87489850103799679976464102267435787899999999999973145068-75781899999
Q gi|254780432|r 3 KNDFLFNTYDQ-SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQSTQQEIFA 80 (392)
Q Consensus 3 ~~~~~~~~~~~-~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~~~~~la 80 (392)
+++|++++|.+ .|++|+||+|+||||.|||+||||+||+|+++|||+||+|++|+++|++++.+.+. .+.++...+|+
T Consensus 11 ~~~~~~~~~~~~~P~~i~~g~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~~~~la 90 (429)
T PRK08117 11 IKRVLAPALAKDHPLPVEKGEGCYYYGVDGKEYLDFTSGIAVLNVGHNHPKVVQAIKEQADRLVHGGSGVIYYESILKLA 90 (429)
T ss_pred HHHHCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 98651765787899218985769999699799999650877534258969999999999863477677754776999999
Q ss_pred HHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC
Q ss_conf 86520101--333123565554035677766543200134786002343546565432123455321-134799986433
Q gi|254780432|r 81 NHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL-QYLEGFGPKIEG 157 (392)
Q Consensus 81 ~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~p~~~~ 157 (392)
++|++..| +++++|++|||||||+|||+||+| |+|++||+|+++|||+|++++++|++. .++..+.|..++
T Consensus 91 e~L~~~~p~~~~~v~f~~sGsEAve~AiklAr~~------tgr~~ii~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~ 164 (429)
T PRK08117 91 EELAEITPGGLDMFFFSNSGAEAIEGALKLAKHV------TKRQGIISFTGAFHGRTLGALSVTTSSSKYRKRYQPLLPS 164 (429)
T ss_pred HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH------CCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 9999848788788999487468999999999986------3898599984577888660455316753234577899998
Q ss_pred CCCCCCHH-----------------HHHHHHHC-----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEE
Q ss_conf 32221002-----------------68875410-----123322223332222112462101232211022345721310
Q gi|254780432|r 158 FDQAKFCD-----------------LQSLKNQI-----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIF 215 (392)
Q Consensus 158 ~~~~~~~d-----------------~~~l~~~~-----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~ 215 (392)
+.++|++. ++.+++.+ +++|||||+|||||++|+++||++||+++|++|++||++||+
T Consensus 165 ~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAviiEPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~ 244 (429)
T PRK08117 165 VYHAPYPYCFRCPIGRDPESCSLECLRDLESLFKRQIAPEEVAAIIIEPVLGEGGYIVPPKEFLQKVREICDEHGILLIF 244 (429)
T ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCCEEEC
T ss_conf 36637886325656788056689999999999986248887899999646678893738889999999998763917973
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 11003444455531011124545302103444444344321000111222223322345321111001233455432012
Q gi|254780432|r 216 DEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSD 295 (392)
Q Consensus 216 DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~ 295 (392)
|||||||||||+||++|++||+|||+|+||+||||||+|||++++++++.+.++.|++||+|||++||||+++|++++++
T Consensus 245 DEV~tGfGRtG~~fa~~~~gv~PDiv~~gK~lggG~Plsav~~~~~i~~~~~~~~~~~T~~gnp~~~aaa~a~L~~~~~~ 324 (429)
T PRK08117 245 DEVQSGFGRTGKWFAAETFGVVPDIMTVAKGIASGFPLSAVVASKELMDQWPLGAHGTTFGGNPVACAAALATLEVIKEE 324 (429)
T ss_pred CCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 43110777667732654049899878871014478986422147999706688886858998989999999999999755
Q ss_pred CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--------HHHHHHHHHHCCEEEEECC--CCEEEE
Q ss_conf 221011210000268899998867970755046400999872499--------8999999996898996268--988995
Q gi|254780432|r 296 GFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--------PALLAAKFRDECLLTAPSS--DNVVRI 365 (392)
Q Consensus 296 ~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--------~~~~~~~l~~~Gll~~~~~--~~~irl 365 (392)
++++|++++|++|+++|+++.++|| +|.+|||+|||+++|++.+ ...+.+.++++|+++...+ +|+|+|
T Consensus 325 ~l~~~v~~~g~~l~~~L~~l~~~~p-~v~~VRG~Gl~~giel~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~n~i~~ 403 (429)
T PRK08117 325 KLLENANNMGAYALERLEKLKEKYP-VIGDVRGIGLMIGIEFVDETGEPDGDAVEKILDKCLENGLLLYGCGNDGNVLRF 403 (429)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCC-CEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEE
T ss_conf 6999999999999999999997199-878852266799999964888946999999999999699589844799998999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 58986889999999999999999852
Q gi|254780432|r 366 LPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 366 ~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
.|||+||++|||+++++|+++|.|++
T Consensus 404 ~PPL~is~~eid~~~~~l~~al~e~a 429 (429)
T PRK08117 404 IPPLTVTKEEIDQGLSILDKGLGEYA 429 (429)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 79977999999999999999999769
No 41
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=753.19 Aligned_cols=387 Identities=26% Similarity=0.441 Sum_probs=346.1
Q ss_pred CCCEECCCCCC-------CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC--CCCC
Q ss_conf 43145155888-------87489850103799679976464102267435787899999999999973145068--7578
Q gi|254780432|r 3 KNDFLFNTYDQ-------SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN--LYQS 73 (392)
Q Consensus 3 ~~~~~~~~~~~-------~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~--~~~~ 73 (392)
+++|+||+|.+ .|++|+||+|+|+||.|||+||||+||+|+++|||+||+|++|+++|++++.+.++ .+.+
T Consensus 15 d~~~~whp~~~~~~~~~~~Pivi~~g~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Ai~~Q~~~l~~~~~~~~~~~ 94 (466)
T PRK07036 15 DKRHLIHPWHDFSSLGREGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNIGYGREEMADAIADQARRLPYYTPFGDMTN 94 (466)
T ss_pred HHHHCCCCCCCCCCCCCCCCEEEEEEEECEEEECCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 98544488888100277899689964226899699999999653478502178979999999999976786067643268
Q ss_pred HHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 189999986520101--333123565554035677766543200134786002343546565432123455321134799
Q gi|254780432|r 74 TQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGF 151 (392)
Q Consensus 74 ~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~ 151 (392)
+...+|+++|++..| ++||+|+||||||||+|||+||+|+...|.++|++||+|+++|||+|.+++++|+++.++..|
T Consensus 95 ~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~E~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~T~~a~s~sg~~~~~~~~ 174 (466)
T PRK07036 95 APAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNCRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEF 174 (466)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHECCCCCCCCCCC
T ss_conf 99999999999748877587998377388999999999999875088876089834897689656562205884456787
Q ss_pred CCCCCCCCCCCCH---------------H--HHHHHH----HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 9864333222100---------------2--688754----101233222233322221124621012322110223457
Q gi|254780432|r 152 GPKIEGFDQAKFC---------------D--LQSLKN----QISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDID 210 (392)
Q Consensus 152 ~p~~~~~~~~~~~---------------d--~~~l~~----~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g 210 (392)
.|..+.+.+++++ + ++.+++ ..+++|||||+|||||++|+++||++||++||++|++||
T Consensus 175 ~~~~~~v~~~~~p~~~~~p~~~~~~~~~~~~~~~~e~~i~~~~~~~iAa~i~EPi~G~gG~~~pp~~yl~~lr~lc~~~g 254 (466)
T PRK07036 175 DYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILELGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYD 254 (466)
T ss_pred CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHCC
T ss_conf 78887504325776555776652367899999999999986188866899856621668713088899999999986379
Q ss_pred CEEEECCCCCCCCCCCCCCCCC-CCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCC
Q ss_conf 2131011003444455531011-1245453021034444443-44321000111222223-------3223453211110
Q gi|254780432|r 211 ALLIFDEVQTGYGRTGKLFAYE-WANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQ-------GSHGSTYGGNVLA 281 (392)
Q Consensus 211 ~llI~DEV~tG~GRtG~~f~~e-~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~-------~~~~~T~~gnpl~ 281 (392)
++||+|||||||||||+||++| ++||+|||+|+||+|+||| |+|||+++++|++.+.. ..|++||+|||++
T Consensus 255 illI~DEV~tG~GRtG~~fa~~~~~gv~PDiv~~gKgl~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla 334 (466)
T PRK07036 255 ILYISDEVVTGFGRLGHFFASEAVFGIQPDIITVAKGLTSGYQPLGAVIISERLVDVISGPNAKGGVFTHGFTYSGHPVA 334 (466)
T ss_pred EEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHCCCCCCCCEEECCCCCCCCHHH
T ss_conf 07997456428886755204358638898779871335688776489998599998750467888455036788899899
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH-------------HHHHHHH
Q ss_conf 012334554320122210112100002688999988679707550464009998724998-------------9999999
Q gi|254780432|r 282 MVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-------------ALLAAKF 348 (392)
Q Consensus 282 ~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-------------~~~~~~l 348 (392)
||||+++|++++++++++|++++|++|+++|++|+ +|| .|.+|||+|||++||++.++ ..+...+
T Consensus 335 ~Aaa~a~L~~l~~e~l~~~~~~~G~~l~~~L~~L~-~~p-~v~dVRG~GLm~gie~v~d~~~~~~~~~~~~~~~~i~~~~ 412 (466)
T PRK07036 335 CAAALKNIEIMEREGLCEHVREVGPYFEERLASLR-ELP-LVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHC 412 (466)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-CCC-CEEEEEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999998626699999999999999999751-599-7788863238999997026654445771179999999999
Q ss_pred HHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 96898996268988995589868899999999999999998529
Q gi|254780432|r 349 RDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLSH 392 (392)
Q Consensus 349 ~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~~ 392 (392)
+++|+++.+.+ |.++|.|||+||++|||+++++|+++|.++++
T Consensus 413 ~~~Gll~~~~g-~~~~l~PPL~it~~eid~~l~~l~~al~ev~~ 455 (466)
T PRK07036 413 QERGLLVRPLE-HLCVLSPPLIITRAQIDEIVAILRAAIEETAD 455 (466)
T ss_pred HHCCEEEEECC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 96994999669-88999899768999999999999999999999
No 42
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=751.65 Aligned_cols=379 Identities=34% Similarity=0.528 Sum_probs=340.1
Q ss_pred CEECCCCC-CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHHH
Q ss_conf 14515588-8874898501037996799764641022674357878999999999999731450687-578189999986
Q gi|254780432|r 5 DFLFNTYD-QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNL-YQSTQQEIFANH 82 (392)
Q Consensus 5 ~~~~~~~~-~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~-~~~~~~~~la~~ 82 (392)
+++.+++. ++|++|+||+|+||||.|||+||||.+|+|+++|||+||+|.+|+++|+++++|+... ..++...+|+++
T Consensus 28 ~~~~~~~~~~~Pv~i~ra~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Ai~~Q~~~l~h~~~~~~~~~~~~~lae~ 107 (446)
T PRK06058 28 AAVARGVGSTLPVYVARAGGGIVEDVDGNRLIDLGSGIAVTTVGNSAPAVVDAVRAQVARFTHTCFMVTPYEGYVAVAEQ 107 (446)
T ss_pred HHCCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 75589989999927997031989969969887803347751217898999999999997435722466654789999999
Q ss_pred HHHHCCC---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC
Q ss_conf 5201013---33123565554035677766543200134786002343546565432123455321-1347999864333
Q gi|254780432|r 83 LIHSTFA---DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL-QYLEGFGPKIEGF 158 (392)
Q Consensus 83 L~~~~~~---~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~p~~~~~ 158 (392)
|++..|. ++++|+||||||||+|||+||+| |+|++||+|+++|||+|.+++++|+.. .++.+|+|..+++
T Consensus 108 L~~~~p~~~~~~~~~~~SGSEAvE~AiKlAR~~------tgr~~iis~~~~YHG~t~~~~~~t~~~~~~~~~~~p~~p~~ 181 (446)
T PRK06058 108 LNRLTPGDHEKRSALFNSGAEAVENAVKIARSY------TGKPAVVAFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEV 181 (446)
T ss_pred HHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH------CCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
T ss_conf 998578766626772488668999999999975------69987999769868898730211278866434678899984
Q ss_pred CCCCC----HH------------------HHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEE
Q ss_conf 22210----02------------------68875410-123322223332222112462101232211022345721310
Q gi|254780432|r 159 DQAKF----CD------------------LQSLKNQI-SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIF 215 (392)
Q Consensus 159 ~~~~~----~d------------------~~~l~~~~-~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~ 215 (392)
.++|+ .+ ++.+++.+ +++|||||+|||||++|+++||++||++||++|++||++||+
T Consensus 182 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~ 261 (446)
T PRK06058 182 YRAPLSYPYRDGLLDKELATDGEEAAARAITVIDKQIGADNLAAVIIEPIQGEGGFIVPAEGFLPALLDWCRENGVVFIA 261 (446)
T ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEC
T ss_conf 56688877666333556222389999999999997438997799997277688898679889999999999874925870
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 11003444455531011124545302103444444344321000111222223322345321111001233455432012
Q gi|254780432|r 216 DEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSD 295 (392)
Q Consensus 216 DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~ 295 (392)
|||||||||||+||++|++||+|||+|+||+|+||+|+|||++++++++.+.++.|++||+|||++||||+++|++++++
T Consensus 262 DEV~TGfGRtG~~fa~e~~gv~PDivt~gKgl~gG~Plsav~~~~ei~~~~~~~~~g~T~~Gnpla~aaala~L~~i~~e 341 (446)
T PRK06058 262 DEVQTGFARTGAMFACEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPHVGGLGGTYGGNPVACAAALAAIETIESD 341 (446)
T ss_pred CCCEECCCCCCCCHHHHHCCCCCCEEEECHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 43120677556604565358899854422101378885100046988606767876778898989999999999999865
Q ss_pred CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC---------HHHHHHHHHHCCEEEEECC--CCEEE
Q ss_conf 221011210000268899998867970755046400999872499---------8999999996898996268--98899
Q gi|254780432|r 296 GFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS---------PALLAAKFRDECLLTAPSS--DNVVR 364 (392)
Q Consensus 296 ~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~---------~~~~~~~l~~~Gll~~~~~--~~~ir 364 (392)
++++|++++|++|+++|++++++|| +|.+|||+|||+++|++.+ ...+..+++++|+++.+.+ +|+||
T Consensus 342 ~l~~~v~~~g~~l~~~L~~l~~~~~-~i~dvRG~GLm~gielv~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~g~~lr 420 (446)
T PRK06058 342 DLVARARQIERLVTDRLGALQAEDD-RIGDVRGRGAMIAIELVKSGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIR 420 (446)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCC-CEEEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEE
T ss_conf 6999999998999999999986099-788776454699999930888895989999999999978988962588999899
Q ss_pred ECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 55898688999999999999999985
Q gi|254780432|r 365 ILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 365 l~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
|.|||+||++|||+++++|+++|.+|
T Consensus 421 l~PPL~it~~eid~~l~il~~al~ev 446 (446)
T PRK06058 421 LLPPLVISDELLSEGLDVLEAALADL 446 (446)
T ss_pred EECCEECCHHHHHHHHHHHHHHHHHC
T ss_conf 97994578999999999999999749
No 43
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=748.34 Aligned_cols=387 Identities=30% Similarity=0.478 Sum_probs=343.9
Q ss_pred CCEE-CCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCHHHHHHHH
Q ss_conf 3145-1558888748985010379967997646410226743578789999999999997314506-8757818999998
Q gi|254780432|r 4 NDFL-FNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQSTQQEIFAN 81 (392)
Q Consensus 4 ~~~~-~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~~~~~~la~ 81 (392)
++|+ .++|.+.+++|+||+|+||||.|||+||||.+|+|+++|||+||+|.+|+++|++++.++. ..+.++..++|++
T Consensus 2 ~~~~~~~~~~~p~Pvi~rg~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~la~ 81 (447)
T PRK06917 2 RDYLIKPLLGQPYPMISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADVIKEQAEEVSFVYRSQFTSEPAEKLAK 81 (447)
T ss_pred CCEECCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf 85003787899882699637799997997999983235898982899799999999998538873666424589999999
Q ss_pred HHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6520101--33312356555403567776654320013478600234354656543212345532113479998643332
Q gi|254780432|r 82 HLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFD 159 (392)
Q Consensus 82 ~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~ 159 (392)
+|++..| .++++|+||||||||+|||+||+|+..++.|+|++||+|+++|||+|.+++|+|+.+.+++.|.|..+++.
T Consensus 82 ~l~~~~p~~~~~~~f~~SGsEAvE~AiKlA~~y~~~r~~t~r~~Iis~~~syHG~T~ga~s~sg~~~~~~~~~~~~~~~~ 161 (447)
T PRK06917 82 KLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHWQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSILEDYP 161 (447)
T ss_pred HHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 99985788878799628789999999999999999838999848999505514666603662388211478788788977
Q ss_pred CCCCHH-----------------HHHHHHHC----CCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 221002-----------------68875410----123322223332222-11246210123221102234572131011
Q gi|254780432|r 160 QAKFCD-----------------LQSLKNQI----SNDTAAILIEPIQGE-GGVRKVPEEFLQQLRKICDDIDALLIFDE 217 (392)
Q Consensus 160 ~~~~~d-----------------~~~l~~~~----~~~iAavi~Epv~g~-~G~~~~~~~~l~~l~~lc~~~g~llI~DE 217 (392)
.++.++ ++.+++.+ +++|||||+|||||+ ||.++||++||++||++|++||++||+||
T Consensus 162 ~~~~p~~~r~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~Gg~~~p~~~yl~~lr~lc~~~gillI~DE 241 (447)
T PRK06917 162 TISAPYCYRCPVQKVYPTCQLACATELERSIERIGAEHIAAFIAEPIIGAAGGAVVPPKGYYKVIKDICSHYDILFIADE 241 (447)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCEECCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 44898655777776540358999999999999738877469997130305797164687899999999652695289741
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 0034444555310111245453021034444443-4432100011122222332----2345321111001233455432
Q gi|254780432|r 218 VQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQGS----HGSTYGGNVLAMVLGEKVLNII 292 (392)
Q Consensus 218 V~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~~----~~~T~~gnpl~~aaa~a~L~~l 292 (392)
|||||||||+||++|++||+|||+|+||+|+||| |+|+++++++|++.+.++. |++||+|||++||||+++|+++
T Consensus 242 V~tGfGRtG~~fa~e~~gv~PDii~~gK~l~gG~~Pl~av~~~~~i~~~~~~g~~~~~~g~Tf~gnpla~aaa~a~L~~l 321 (447)
T PRK06917 242 VMTGLGRTGAWFAMEHWGVEPDIMTLGKGLGAGYTPMAATVVSDRVMEPILRGSRSVMSGHTLSANPLSAATALAVIEYM 321 (447)
T ss_pred CEECCCCCCCCCHHHHCCCCCCEEEECHHHCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 10078756874315335989778977401118987738998818988654058876201778989999999999999999
Q ss_pred HCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH-------------HHHHHHHHHCCEEEEEC-
Q ss_conf 0122210112100002688999988679707550464009998724998-------------99999999689899626-
Q gi|254780432|r 293 QSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-------------ALLAAKFRDECLLTAPS- 358 (392)
Q Consensus 293 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-------------~~~~~~l~~~Gll~~~~- 358 (392)
+++++++|++++|++|+++|+++.++| +++.+|||+|||++||++.+. ..+...++++||++.+.
T Consensus 322 ~~~~l~~~~~~~G~~l~~~L~~l~~~~-~~i~dVRG~GLm~giel~~d~~~~~~~~~~~~~a~~i~~~~~~~Gll~~~~~ 400 (447)
T PRK06917 322 EKHNLPEKTAEKGEYLIKGLQEVQQQS-TIIGDVRGKGLLIGVEFVADQKTKKPFPQPFSKASELISVAAKNGLLLYPAV 400 (447)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
T ss_conf 864599999999999999999998639-9778765156169999842665567787248999999999997898898744
Q ss_pred ------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf ------898899558986889999999999999999852
Q gi|254780432|r 359 ------SDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 359 ------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
.+|+|||.|||+||++|||+++++|++++.++.
T Consensus 401 ~~~~g~~~~~lrl~PPL~it~~eid~~i~~l~~al~ev~ 439 (447)
T PRK06917 401 SGQAGKEGSALLIAPPMTTTYSELDELLSIFAKSVEEMM 439 (447)
T ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 567789999899979922789999999999999999999
No 44
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=0 Score=747.78 Aligned_cols=379 Identities=33% Similarity=0.559 Sum_probs=343.1
Q ss_pred CEECCCC-CCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCHHHHHHHHH
Q ss_conf 1451558-888748985010379967997646410226743578789999999999997314506-87578189999986
Q gi|254780432|r 5 DFLFNTY-DQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQSTQQEIFANH 82 (392)
Q Consensus 5 ~~~~~~~-~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~~~~~~la~~ 82 (392)
+|..+++ .++|++|+||+|+||||.|||+||||++|+|+.++||+||+|++|+++|++++.|.. ..+.++...+|+++
T Consensus 27 ~~~~~~~~~~~P~vi~ra~G~~l~D~dG~~yLD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~~~~~~~~~~~~~~~lae~ 106 (454)
T PRK06918 27 NIVPKGVSNGIPTFVQSANGALVTDVDGNQYIDFAGAIGTINVGHCHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEK 106 (454)
T ss_pred HHCCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 76799889999817997061989979979999915069865526897999999999986466767775547699999999
Q ss_pred HHHHCC--CC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC
Q ss_conf 520101--33-3123565554035677766543200134786002343546565432123455321-1347999864333
Q gi|254780432|r 83 LIHSTF--AD-RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL-QYLEGFGPKIEGF 158 (392)
Q Consensus 83 L~~~~~--~~-~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~p~~~~~ 158 (392)
|++..| .+ +|+|++|||||||+|||+||+| |+|++||+|+++|||+|.+++|+|++. .++.+|+|..+++
T Consensus 107 L~~~~p~~~~~~v~f~~SGsEAvE~AlKlAr~~------t~r~~ii~~~~~yHG~T~~a~s~t~~~~~~~~~~~p~~p~~ 180 (454)
T PRK06918 107 LAALAPGSFDKQVLFLNSGAEAVENAVKIARKY------TKRQGIIAFSKGFHGRTLMTMTMTSKVKPYKFGFGPFAPEV 180 (454)
T ss_pred HHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHH------CCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 998477454746998278517999999999987------28875676338717862445653079854224678889983
Q ss_pred CCCCCHH-----------------HHHHHHH-----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 2221002-----------------6887541-----01233222233322221124621012322110223457213101
Q gi|254780432|r 159 DQAKFCD-----------------LQSLKNQ-----ISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFD 216 (392)
Q Consensus 159 ~~~~~~d-----------------~~~l~~~-----~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 216 (392)
.++|+++ ++.+++. .+++|||||+|||||++|+++||++||++||++|++||++||+|
T Consensus 181 ~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~D 260 (454)
T PRK06918 181 YKAPFPYEYRRPEGLTEEQYDDFIIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVAD 260 (454)
T ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 66578642357789976677899999999999862488866899996887888986689899999999885649168720
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 10034444555310111245453021034444443443210001112222233223453211110012334554320122
Q gi|254780432|r 217 EVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDG 296 (392)
Q Consensus 217 EV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~ 296 (392)
||||||||||+||++|++|++|||+|+||+||||+|+|||++++++++.+.++.+++||+|||++||||+++|++|++++
T Consensus 261 EV~tGfGRtG~~fa~e~~gv~PDiv~~gK~lg~G~Plsav~~~~~i~~~~~~~~~~~Tf~gnpla~aaa~a~L~~i~~e~ 340 (454)
T PRK06918 261 EIQTGFSRTGKYFAIDHYDVVPDLITVSKSLGAGVPISGVIGRKEIMNEAAPGELGGTYAGSPLGCAAALAVLDIIEKEN 340 (454)
T ss_pred ECCCCCCCCCCCCHHHCCCCCCEEEEECCHHHCCCCCCCEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 11248761357402222798985999772655899872265218876046886715617989899999999999998668
Q ss_pred CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC----------HHHHHHHHHHCCEEEEECC--CCEEE
Q ss_conf 21011210000268899998867970755046400999872499----------8999999996898996268--98899
Q gi|254780432|r 297 FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS----------PALLAAKFRDECLLTAPSS--DNVVR 364 (392)
Q Consensus 297 l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~----------~~~~~~~l~~~Gll~~~~~--~~~ir 364 (392)
+++|++++|++|+++|++++++|| .+.+|||+|||+++|++.+ ...+.+.++++|+++.+.+ +|+||
T Consensus 341 l~~~~~~~G~~l~~~L~~l~~~~p-~v~~vRG~Gl~~gvelv~d~~~~~p~~~~~~~i~~~~~~~Gll~~~~g~~~~vlr 419 (454)
T PRK06918 341 LNDRAIELGKVVMNRFEEMKNKYN-CIGDVRGLGAMCAFELVQDRKTKEPDKTLTANLCAEANKRGLLLLSAGTYGNVIR 419 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCC-CEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEE
T ss_conf 999999999999999999986299-8688822647999999506766897799999999999968959984688999899
Q ss_pred ECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 55898688999999999999999985
Q gi|254780432|r 365 ILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 365 l~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
|.|||+||++|||+++++|+++|+++
T Consensus 420 ~~PPL~it~~eid~~l~~l~~al~a~ 445 (454)
T PRK06918 420 VLMPLVITDEQLEEGLTIIEESLQAC 445 (454)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 97882289999999999999999999
No 45
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=0 Score=750.51 Aligned_cols=386 Identities=33% Similarity=0.539 Sum_probs=346.9
Q ss_pred CCCEECCCCCC------CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCHH
Q ss_conf 43145155888------87489850103799679976464102267435787899999999999973145068-757818
Q gi|254780432|r 3 KNDFLFNTYDQ------SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQSTQ 75 (392)
Q Consensus 3 ~~~~~~~~~~~------~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~~ 75 (392)
+.+|+||.|.+ .|.+|+||+|+|+||.|||+|||.+||+||+|+||+||+|.+|+++|++++.|++. .+.+.+
T Consensus 9 d~~~~whP~t~~~~~~~~~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P 88 (449)
T COG0161 9 DLSHLWHPFTQMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP 88 (449)
T ss_pred HHHHEECCCCCCCCCCCCCEEEEECCEEEEEECCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCH
T ss_conf 46424365445665555561466364369997899899752107788634769779999999999857740114557836
Q ss_pred HHHHHHHHHHHCC---CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 9999986520101---333123565554035677766543200134786002343546565432123455321-134799
Q gi|254780432|r 76 QEIFANHLIHSTF---ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL-QYLEGF 151 (392)
Q Consensus 76 ~~~la~~L~~~~~---~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~ 151 (392)
..+||++|++..| +++|||++|||||||.|+|||++||..+|+++|++||+++++|||.|++++|++|.. .++..|
T Consensus 89 a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~ 168 (449)
T COG0161 89 AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFY 168 (449)
T ss_pred HHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHEECCCCHHHHHHHC
T ss_conf 99999999986798775679980896189999999999999965997531899952674766530013568545554301
Q ss_pred CCCCCCCCCCCCHH-----------------HHHHHHHC----CCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHCCCCCC
Q ss_conf 98643332221002-----------------68875410----123322223332222-112462101232211022345
Q gi|254780432|r 152 GPKIEGFDQAKFCD-----------------LQSLKNQI----SNDTAAILIEPIQGE-GGVRKVPEEFLQQLRKICDDI 209 (392)
Q Consensus 152 ~p~~~~~~~~~~~d-----------------~~~l~~~~----~~~iAavi~Epv~g~-~G~~~~~~~~l~~l~~lc~~~ 209 (392)
.+.++.+.+++.++ +++|++.+ +++|||||+|||++. ||+++||++||+++|++|++|
T Consensus 169 ~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky 248 (449)
T COG0161 169 DPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKY 248 (449)
T ss_pred CCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 44455762268996434577777748899999999999986095528999955200566775418768999999999983
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCHH
Q ss_conf 721310110034444555310111245453021034444443-443210001112222233-----22345321111001
Q gi|254780432|r 210 DALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQG-----SHGSTYGGNVLAMV 283 (392)
Q Consensus 210 g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~-----~~~~T~~gnpl~~a 283 (392)
|||||+|||.|||||||+|||+|++||+|||+|+||+|+||| |+||++++++|++.+..+ .||+||+|||++||
T Consensus 249 ~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacA 328 (449)
T COG0161 249 GILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACA 328 (449)
T ss_pred CCEEEECCCEECCCCCCHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHH
T ss_conf 94799301100788575155665259997846551310126501076750599999986466870144786644899999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCHH-----------HHHHHHHHCC
Q ss_conf 23345543201222101121000026889999886797075504640099987249989-----------9999999689
Q gi|254780432|r 284 LGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSPA-----------LLAAKFRDEC 352 (392)
Q Consensus 284 aa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~-----------~~~~~l~~~G 352 (392)
||+++|++++++++++|+++++.+|.++|+++...+| .|.||||+|+|.+||++.+.. .+.+.++++|
T Consensus 329 aAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p-~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~G 407 (449)
T COG0161 329 AALANLDILEEEDLLERVAEIGAYLQAGLQAALADHP-LVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERG 407 (449)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC-CEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 9998899998567999999999999999987513699-278722265599999841566666404569999999999789
Q ss_pred EEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89962689889955898688999999999999999985
Q gi|254780432|r 353 LLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 353 ll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
++++|.+ ++|.|+|||+||++|||++++++.+++.+.
T Consensus 408 l~iRp~g-~~i~~~PPliit~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 408 LLIRPLG-DVIYLMPPLIITREEIDELVDALREALDET 444 (449)
T ss_pred EEEEECC-CEEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 3895559-889973883489999999999999999998
No 46
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=0 Score=748.17 Aligned_cols=382 Identities=34% Similarity=0.534 Sum_probs=341.3
Q ss_pred CCCEECCCCCC-CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCHHHHHHH
Q ss_conf 43145155888-87489850103799679976464102267435787899999999999973145068-75781899999
Q gi|254780432|r 3 KNDFLFNTYDQ-SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQSTQQEIFA 80 (392)
Q Consensus 3 ~~~~~~~~~~~-~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~~~~~la 80 (392)
++++++++|.+ +|++|+||+|+||||.|||+||||.||+|+++|||+||+|++|+++|+++++|+.. .+.++...+|+
T Consensus 12 ~~~~~~~~~~~~~Pi~i~ra~G~~l~D~dG~~YLD~~~g~~~~~lGH~hp~i~~Av~~q~~~l~~~~~~~~~~~~~~~la 91 (426)
T PRK08088 12 RSAAVPRGVGQIHPIFADRAENCTVWDVEGREYIDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELC 91 (426)
T ss_pred HHHHCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 99755898898999339973529899699899999151688651089969999999999864788567755667999999
Q ss_pred HHHHHHCCC---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf 865201013---331235655540356777665432001347860023435465654321234553211-3479998643
Q gi|254780432|r 81 NHLIHSTFA---DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ-YLEGFGPKIE 156 (392)
Q Consensus 81 ~~L~~~~~~---~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~-~~~~~~p~~~ 156 (392)
++|++..|. ++++|++|||||||+|||+||.| |+|++||+|+++|||+|.+++++|++.. +..++++.+.
T Consensus 92 e~l~~~~p~~~~~~v~f~~sGsEAve~AiklAR~~------tgr~~ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~ 165 (426)
T PRK08088 92 EKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAA------TKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPG 165 (426)
T ss_pred HHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHH------HCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
T ss_conf 99998577555655885497699999999998776------436663663577489852125424887776677889998
Q ss_pred CCCCCCC----------HHHHHHHHHC-----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCC
Q ss_conf 3322210----------0268875410-----123322223332222112462101232211022345721310110034
Q gi|254780432|r 157 GFDQAKF----------CDLQSLKNQI-----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTG 221 (392)
Q Consensus 157 ~~~~~~~----------~d~~~l~~~~-----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG 221 (392)
++.+.++ ++++.+++.+ +++|||||+|||||++|+++||++||+++|++|++||++||+||||||
T Consensus 166 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPi~g~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG 245 (426)
T PRK08088 166 HVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDQHGIMLIADEVQTG 245 (426)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCCCC
T ss_conf 74026688623578816799999999974478776789997775677886638879999999999876905876330228
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
Q ss_conf 44455531011124545302103444444344321000111222223322345321111001233455432012221011
Q gi|254780432|r 222 YGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENV 301 (392)
Q Consensus 222 ~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~ 301 (392)
|||||+||++|++|++|||+|+||+|+||||+|||++++++++.+.++.|++||+|||++||||+++|++|+++++++|+
T Consensus 246 fGRtG~~fa~~~~gv~PDii~~gK~l~gG~Plsav~~~~~i~~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~e~l~~~~ 325 (426)
T PRK08088 246 AGRTGTFFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLEVFEEENLLQRA 325 (426)
T ss_pred CCCCCCHHHHHHCCCCCCEEEHHHHHCCCCCCCCEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 77667413566419897620121440388875000003999953368887888898989999999999999865899999
Q ss_pred HHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH----------HHHHHHHHHCCEEEEECC--CCEEEECCCC
Q ss_conf 2100002688999988679707550464009998724998----------999999996898996268--9889955898
Q gi|254780432|r 302 INIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP----------ALLAAKFRDECLLTAPSS--DNVVRILPPL 369 (392)
Q Consensus 302 ~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------~~~~~~l~~~Gll~~~~~--~~~irl~Ppl 369 (392)
+++|++|+++|+++.++|| .|.+|||+|||+++|++.+. ..+..+++++|+++.+.+ +|+|||.|||
T Consensus 326 ~~~G~~l~~~L~~l~~~~p-~i~~VRG~GLm~gvelv~~~~~~~p~~~~~~~i~~~~~~~Gll~~~~g~~gnvir~~PPL 404 (426)
T PRK08088 326 NALGERLKDGLLAIAEKHP-EIGDVRGLGAMIAIELFEDGDHSKPAAKLTAQIVARARDKGLILLSCGTYYNVLRILVPL 404 (426)
T ss_pred HHHHHHHHHHHHHHHHHCC-CEEEEEECCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCE
T ss_conf 9999999999999986099-889999445599999860687678789999999999996899998338999989997893
Q ss_pred CCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 6889999999999999999852
Q gi|254780432|r 370 TITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 370 ~it~~eid~~i~~l~~al~~L~ 391 (392)
+||++|||+++++|+++|.|..
T Consensus 405 ~it~~eid~~~~~l~~al~ea~ 426 (426)
T PRK08088 405 TIEDAQIRQGLEIIAQCFDEAK 426 (426)
T ss_pred ECCHHHHHHHHHHHHHHHHHHC
T ss_conf 4789999999999999999539
No 47
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=747.20 Aligned_cols=374 Identities=34% Similarity=0.538 Sum_probs=337.1
Q ss_pred CCCCCC-CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCHHHHHHHHHHHH
Q ss_conf 155888-87489850103799679976464102267435787899999999999973145068-7578189999986520
Q gi|254780432|r 8 FNTYDQ-SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQSTQQEIFANHLIH 85 (392)
Q Consensus 8 ~~~~~~-~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~~~~~la~~L~~ 85 (392)
-+.|.+ .|++++||+|+||||.|||+||||+||+|++++||+||+|++|+++|++++.|+.. .+.++...+|+++|++
T Consensus 15 ~~~~~~~~~~~~~rg~G~yl~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~Ql~~l~~~~~~~~~~~~~~~lae~l~~ 94 (421)
T PRK06777 15 PRGIGVMCDFYAVRAENATLWDEEGREYIDFAAGIAVLNTGHRHPKVMAAVRQQLDQFTHTAYQIVPYASYVTLAERINS 94 (421)
T ss_pred CCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 89878899879996724989969879998935338752024798999999999986135745545566699999999997
Q ss_pred HCC---CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf 101---33312356555403567776654320013478600234354656543212345532-11347999864333222
Q gi|254780432|r 86 STF---ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK-LQYLEGFGPKIEGFDQA 161 (392)
Q Consensus 86 ~~~---~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~-~~~~~~~~p~~~~~~~~ 161 (392)
..| .+|++|++|||||||+|||+||+| |+|++||+|+++|||+|++++++|++ ..++.+++|.+..+.+.
T Consensus 95 ~~p~~g~~~v~f~~SGSEAve~AiKlAr~~------tgr~~ii~~~~syHG~t~~a~s~tg~~~~~~~~~~p~p~~~~~~ 168 (421)
T PRK06777 95 LAPISGNSKTAFFTTGAEAVENAVKIARAA------TGRPGVIAFSGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHA 168 (421)
T ss_pred HCCCCCCCEEEEECCHHHHHHHHHHHHHHH------CCCCCEEEECCCCCCCCHHHEECCCCCCCCCCCCCCCCCCEEEC
T ss_conf 477667644999678278999999999986------39996377578769963433001588775446778999860223
Q ss_pred CCHH----------HHHHHHHC-----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 1002----------68875410-----12332222333222211246210123221102234572131011003444455
Q gi|254780432|r 162 KFCD----------LQSLKNQI-----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG 226 (392)
Q Consensus 162 ~~~d----------~~~l~~~~-----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG 226 (392)
++++ ++.+++.+ +++|||||+|||||++|+++||++||+++|++|++||++||+|||||||||||
T Consensus 169 ~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iAAvi~EPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRtG 248 (421)
T PRK06777 169 LYPNELYGVSVEEAISSVERLFRCDISPTQVAAILLEPIQGEGGFNIAPPEFVSALRTLCDEHGILLIADEVQTGFARTG 248 (421)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCCEEEECCCEECCCCCC
T ss_conf 68972246568999999999997505888589999835437888640999999999999998397797112110677567
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCC
Q ss_conf 53101112454530210344444434432100011122222332234532111100123345543201222101121000
Q gi|254780432|r 227 KLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAK 306 (392)
Q Consensus 227 ~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~ 306 (392)
+||++|+|||+|||+|+||+|+||+|+||++++++|++.+.++.|++||+|||++||||+++|++++++++++|++++|+
T Consensus 249 ~~fa~e~~gv~PDiv~~gKgl~gG~P~~av~~~~~i~~~~~~~~~~~Tf~G~pl~caaa~a~L~~i~~~~l~~~~~~~g~ 328 (421)
T PRK06777 249 KLFAMEYYDTKVDLITMAKSLGGGMPISAVTGRADVMDAPLPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCERALILGA 328 (421)
T ss_pred CCCHHHCCCCCCCEEEECCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 84343158777978874400258765078986278752578876378899898999999999999986359999999999
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC---------HHHHHHHHHHCCEEEEECC--CCEEEECCCCCCCHHH
Q ss_conf 0268899998867970755046400999872499---------8999999996898996268--9889955898688999
Q gi|254780432|r 307 ILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS---------PALLAAKFRDECLLTAPSS--DNVVRILPPLTITAEE 375 (392)
Q Consensus 307 ~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~---------~~~~~~~l~~~Gll~~~~~--~~~irl~Ppl~it~~e 375 (392)
+|.++|+++..+|| .|.+|||+|||+++|+..+ ...+..+++++|+++.+.+ +|+|||.|||+||++|
T Consensus 329 ~l~~~L~~l~~~~p-~v~dVRG~GL~~gie~~d~~~~~~~~~~~~~i~~~~~~~Glll~~~g~~~nvir~~PPL~it~~e 407 (421)
T PRK06777 329 KLVEVLEKAQMSNA-AIVGIRARGSMVAVEFNDPVTGKPSPELTRAYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDKQ 407 (421)
T ss_pred HHHHHHHHHHHHCC-CEEEEECCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCHHH
T ss_conf 99999999885589-88986236489999971687789589999999999997898898458999989997995478999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q gi|254780432|r 376 IHEGLERIERTAI 388 (392)
Q Consensus 376 id~~i~~l~~al~ 388 (392)
||+++++|+++|.
T Consensus 408 id~~~~il~~aL~ 420 (421)
T PRK06777 408 FKKAMNILTRLLA 420 (421)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999974
No 48
>PRK07894 consensus
Probab=100.00 E-value=0 Score=748.12 Aligned_cols=385 Identities=31% Similarity=0.454 Sum_probs=339.3
Q ss_pred CCCEECCCCCC------CCEEEEEECCCEE---EECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCC
Q ss_conf 43145155888------8748985010379---9679976464102267435787899999999999973145068-757
Q gi|254780432|r 3 KNDFLFNTYDQ------SDIRFEKGKGAWL---FSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQ 72 (392)
Q Consensus 3 ~~~~~~~~~~~------~p~~i~~a~G~~i---~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~ 72 (392)
|++|+||.|.+ .|++|+||+|+|+ ||.|||+|||+.||+|++|+||+||+|++|+++|++++.|+.. .+.
T Consensus 13 D~~~~whp~~~~~~~~~~P~~i~~a~G~~l~~v~D~dG~~ylD~~sg~~~~~lGh~hp~i~~Ai~~Q~~~l~~~~~~~~~ 92 (430)
T PRK07894 13 DAAHLWHPYSTIGAEAVPPVVAVAASGAWLTLIRDGGPIEVLDAMSSWWTAIHGHGHPVLDAALTRQLATMNHVMFGGLT 92 (430)
T ss_pred HHHHCCCCCCCCCCCCCCCEEEEEEEECEECCEECCCCCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99543798888532589986899866176732088999998873067985403769899999999999757784568757
Q ss_pred CHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC
Q ss_conf 8189999986520101--3331235655540356777665432001347860023435465654321234553211-347
Q gi|254780432|r 73 STQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ-YLE 149 (392)
Q Consensus 73 ~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~-~~~ 149 (392)
++...+|+++|++..| ++||||+||||||||+|||+||+|+..+|.|+|++||++++||||+|++++|+++... .+.
T Consensus 93 ~~~~~~lae~L~~~~p~~l~~vff~~sGSeAvE~AiKlAr~y~~~~g~~~r~~ii~~~~sYHG~T~ga~s~t~~~~~~~~ 172 (430)
T PRK07894 93 HEPAARLAQLLVDITPAGLDTVFFSDSGSVSVEVAVKMALQYWRSRGRPGKHRLMTWRGGYHGDTFTPMSVCDPDGGMHS 172 (430)
T ss_pred CHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCC
T ss_conf 68999999999984888879799727818899999999999999718877507999717404777114775338777666
Q ss_pred CCCCCCCCCCC---CC-------CHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 99986433322---21-------0026887541012332222333-2222112462101232211022345721310110
Q gi|254780432|r 150 GFGPKIEGFDQ---AK-------FCDLQSLKNQISNDTAAILIEP-IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV 218 (392)
Q Consensus 150 ~~~p~~~~~~~---~~-------~~d~~~l~~~~~~~iAavi~Ep-v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV 218 (392)
.+.+..+.... .| ..+++.+.+...++|||||+|| +||+||+++||++||++||++|++||+|||+|||
T Consensus 173 ~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~~~~iAaii~EP~iqg~GG~~~p~~~yl~~lr~lc~~~gillI~DEV 252 (430)
T PRK07894 173 LWTDVLARQVFAPQVPRDYDPAYSAAFEAQLAQHADELAAVIVEPVVQGAGGMRFHDPRYLRDLRDICDRHDVLLIFDEI 252 (430)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCC
T ss_conf 66788877666899974326788999999998469986699997874388981028999999999987512762650213
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 034444555310111245453021034444443-443210001112222233-----22345321111001233455432
Q gi|254780432|r 219 QTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQG-----SHGSTYGGNVLAMVLGEKVLNII 292 (392)
Q Consensus 219 ~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~-----~~~~T~~gnpl~~aaa~a~L~~l 292 (392)
||||||||+||++|++|++|||+|+||+||||| |+||++++++|++.+..+ .|++||+|||++||||+++|+++
T Consensus 253 ~tGfGRTG~~fa~e~~gv~PDii~~aKgl~gGy~Pl~avl~~~~i~~~~~~~~~~~~~Hg~Ty~GnplacAaala~L~~i 332 (430)
T PRK07894 253 ATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLTLAATLCTADVAHTISAGEAGALMHGPTFMANPLACAVSVASVELL 332 (430)
T ss_pred CCCCCCCCCCCHHHCCCCCCEEEEECCHHHCCCCCCEEEEEHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 11787356763543189886399977354489976201224298997456788886123789888989999999999999
Q ss_pred HCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEEECCCCEEEECCCCC
Q ss_conf 012221011210000268899998867970755046400999872499--899999999689899626898899558986
Q gi|254780432|r 293 QSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTAPSSDNVVRILPPLT 370 (392)
Q Consensus 293 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~ 370 (392)
+++++++|++++|++|+++|+++. ++| .|.+|||+|+|+++|+..+ .....+.++++|+++++. +|+|+|+|||+
T Consensus 333 ~~e~l~~~~~~~g~~l~~~L~~l~-~~p-~V~dVRg~Gl~~~vel~~~~~~~~~~~~a~~~Gvl~r~~-~n~i~l~PPL~ 409 (430)
T PRK07894 333 LGQDWRTRVAEIEAGLTAGLAPAR-ALP-GVTDVRVLGAIGVIELDRPVDLAVATPAALDHGVWLRPF-RNLVYAMPPYI 409 (430)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHC-CCC-CEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEC-CCEEEEECCCC
T ss_conf 856799999999999999999745-799-769894668099999678456899999999799389854-99999979946
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q ss_conf 88999999999999999985
Q gi|254780432|r 371 ITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 371 it~~eid~~i~~l~~al~~L 390 (392)
||++|||+++++|++++++|
T Consensus 410 it~~eid~~~~~l~eal~~l 429 (430)
T PRK07894 410 CTPAEIAQITSAMVEVARAL 429 (430)
T ss_pred CCHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999960
No 49
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=745.71 Aligned_cols=385 Identities=31% Similarity=0.548 Sum_probs=342.6
Q ss_pred CEECCCCCC-CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCHHHHHHHHH
Q ss_conf 145155888-87489850103799679976464102267435787899999999999973145068-7578189999986
Q gi|254780432|r 5 DFLFNTYDQ-SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQSTQQEIFANH 82 (392)
Q Consensus 5 ~~~~~~~~~-~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~~~~~la~~ 82 (392)
+|.|+.+.+ .|++|+||+|+||||.|||+||||+||+|+++|||+||+|++|+++|++++.+.+. .+.++..++|+++
T Consensus 2 ~~~~~~~~~~~~Pviv~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~Lae~ 81 (443)
T PRK07483 2 THVFHRSPRATLPVAVAGDGIYIIDSTGKRYLDASGGAAVSCLGHSHPRVIAAIKAQIDRLAYAHTSFFTTEPAEALADR 81 (443)
T ss_pred CCCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 97778888899997896555989979979999835188977447997999999999983368744575577899999999
Q ss_pred HHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 520101--333123565554035677766543200134786002343546565432123455321134799986433322
Q gi|254780432|r 83 LIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQ 160 (392)
Q Consensus 83 L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~ 160 (392)
|++..| .++++|+||||||||+|||+||+|+..++.|+|++||+|+++|||+|.++++++++.+++++|.|..+++.+
T Consensus 82 L~~~~p~~~~~v~f~~sGsEAve~AiklAr~y~~~~g~~~r~~ii~~~~~yHG~t~gals~sg~~~~~~~~~p~~~~~~~ 161 (443)
T PRK07483 82 LVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEKGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHH 161 (443)
T ss_pred HHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEE
T ss_conf 99857888587999686688999999999999987189987289998378878850011014761015888888888444
Q ss_pred CC----CHH--------------HHHHHHH----CCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 21----002--------------6887541----0123322223332222-11246210123221102234572131011
Q gi|254780432|r 161 AK----FCD--------------LQSLKNQ----ISNDTAAILIEPIQGE-GGVRKVPEEFLQQLRKICDDIDALLIFDE 217 (392)
Q Consensus 161 ~~----~~d--------------~~~l~~~----~~~~iAavi~Epv~g~-~G~~~~~~~~l~~l~~lc~~~g~llI~DE 217 (392)
++ +.+ ++.++.. .+++|||||+|||||+ +|+++||++||++||++|++||++||+||
T Consensus 162 ~~p~~~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAavi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~gillI~DE 241 (443)
T PRK07483 162 VSPCYAYRDQRAGETDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDE 241 (443)
T ss_pred ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEEC
T ss_conf 06887544567888878999999999999998608886789998343047588544888999999999986695899961
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 0034444555310111245453021034444443-443210001112222233----22345321111001233455432
Q gi|254780432|r 218 VQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQG----SHGSTYGGNVLAMVLGEKVLNII 292 (392)
Q Consensus 218 V~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~----~~~~T~~gnpl~~aaa~a~L~~l 292 (392)
|||||||||+||++|++||+|||+|+||+||||| |+||++++++|++.+.++ .|++||+|||++||||+++|++|
T Consensus 242 V~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~gG~~Pl~a~~~~~~i~~~~~~~~~~~~hg~T~~gnpla~aaa~a~L~~i 321 (443)
T PRK07483 242 VMCGMGRTGTLFACEEDGVAPDLLTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVI 321 (443)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 52278854377530004558981013332248877327997568999754368753345888889989999999999999
Q ss_pred HCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--------H-----HHHHHHHHHCCEEEEEC-
Q ss_conf 012221011210000268899998867970755046400999872499--------8-----99999999689899626-
Q gi|254780432|r 293 QSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--------P-----ALLAAKFRDECLLTAPS- 358 (392)
Q Consensus 293 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--------~-----~~~~~~l~~~Gll~~~~- 358 (392)
+++++++|++++|++|+++|+++.++||. |.+|||+|||+++|++.+ + ..+...++++||++++.
T Consensus 322 ~~~~l~~~~~~~g~~l~~~L~~l~~~~p~-I~dVRG~GLm~gielv~~~~~~~~~d~~~~~~~~i~~~~~~~Gll~~~~g 400 (443)
T PRK07483 322 AEDGLLANVRARGEQLRARLRERLGQHPH-VGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMG 400 (443)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHCCCC-EEEEECCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 86469999999999999999999864997-78854041489999732676567777568999999999997895898777
Q ss_pred ------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ------89889955898688999999999999999985
Q gi|254780432|r 359 ------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 359 ------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.+|+|+|+|||+||++|||+++++|+++|.++
T Consensus 401 ~~~~g~~~~~i~l~PPL~it~~eid~~i~~l~~aL~~v 438 (443)
T PRK07483 401 GTIDGVRGDHVLLAPPFIITAQQIDEIVERLGDAIDAA 438 (443)
T ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 76457769989998996289999999999999999999
No 50
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=747.16 Aligned_cols=380 Identities=26% Similarity=0.476 Sum_probs=346.2
Q ss_pred CCCEECCCCCCCCE--EEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 43145155888874--8985010379967997646410226743578789999999999997314506875781899999
Q gi|254780432|r 3 KNDFLFNTYDQSDI--RFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFA 80 (392)
Q Consensus 3 ~~~~~~~~~~~~p~--~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la 80 (392)
|++|.+|.|.+.|. +|+||+|+||||.|||+|||| +|.+++++||+||+|++|+++|++++.+++..|.++...+||
T Consensus 42 ~~~~~~h~~~~~p~~~~i~raeG~yl~D~dG~~YLD~-~G~~v~~lGh~hp~v~~Ai~~Q~~~l~~~~~~~~~~~~~~lA 120 (460)
T PRK06082 42 DSEVFLHQAMSTPCLDTLEAAEGIYIQDASGKKYMDF-HGNNVHQLGYGHPHVIKKVTEQIAKLPFSPRRFTNETAIECA 120 (460)
T ss_pred HHHHHHHHCCCCCCCCEEEECCCCEEEECCCCEEEEE-CCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 5787787517987787146052698997988999983-478768567799999999999997588876552688999999
Q ss_pred HHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86520101--3331235655540356777665432001347860023435465654321234553211347999864333
Q gi|254780432|r 81 NHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGF 158 (392)
Q Consensus 81 ~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~ 158 (392)
++|++..| ++||+|+||||||||+|||+||+| |+|++||+++++|||+|++++|+++.+.++++++|.++++
T Consensus 121 ~~L~~~~p~~l~~v~f~~SGSEAvE~AiKlAr~~------tgr~kiIs~~~syHG~T~~als~~g~~~~r~~~~pl~~g~ 194 (460)
T PRK06082 121 EKLTEICGGELNRVLFAPGGTSVIGMALKLARHI------TGNYKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGV 194 (460)
T ss_pred HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHH------HCCCEEEEECCCCCCCCHHHHHCCCCHHHCCCCCCCCCCC
T ss_conf 9999857877697984396589999999999885------2886489960786776266655049543336888989997
Q ss_pred CCCCCHH----------------HHHHHHHC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCC
Q ss_conf 2221002----------------68875410--12332222333222211246210123221102234572131011003
Q gi|254780432|r 159 DQAKFCD----------------LQSLKNQI--SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQT 220 (392)
Q Consensus 159 ~~~~~~d----------------~~~l~~~~--~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t 220 (392)
.++|+++ .+.++..+ .++|||||+||||++ |+..||++||++||++|++||+|||+|||||
T Consensus 195 ~~vp~p~~~~~~~~~~~~~~~~~~~~le~~ie~~g~iAA~i~EPi~~~-g~~~P~~~yl~~lr~lc~~~giLlI~DEVqt 273 (460)
T PRK06082 195 ERIPPAVSYRGAFPRADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNT-DVQVPSKAYWKRIREICDKHNVLLIIDDIPN 273 (460)
T ss_pred EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCCEEECCCCCC
T ss_conf 547986323666676431128999999998605797899996166678-8806898999999999997298576033202
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 4444555310111245453021034444443-443210001112222233223453211110012334554320122210
Q gi|254780432|r 221 GYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLE 299 (392)
Q Consensus 221 G~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~ 299 (392)
||||||+||++|++||+|||+|+||+||||| |+|||++++++++......+++||+|||++||||+++|++|+++++++
T Consensus 274 GfGRTG~~fa~e~~gv~PDIv~~gKglggG~~Pisav~~~~~~~~~~~~~~g~~T~~gnPl~cAaAlA~L~iie~e~l~~ 353 (460)
T PRK06082 274 GMGRSGEWFTHQAFDIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQISLGHYTHEKSPIGCAAALATMEAIEQEGLLD 353 (460)
T ss_pred CCCCCCCHHHHHCCCCCCCEEEECHHHHCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_conf 88754434466317999828998816438977638998748855201577654367898799999999999997257889
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC----------HHHHHHHHHHCCEEEEECCCCEEEECCCC
Q ss_conf 11210000268899998867970755046400999872499----------89999999968989962689889955898
Q gi|254780432|r 300 NVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS----------PALLAAKFRDECLLTAPSSDNVVRILPPL 369 (392)
Q Consensus 300 ~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~----------~~~~~~~l~~~Gll~~~~~~~~irl~Ppl 369 (392)
|++++|++|+++|+++.++|| +|.+|||+|||++||++.+ ...+..+++++||++.+..+|+|||+|||
T Consensus 354 ~a~~~G~~l~~~L~~L~~~~p-~VgdVRG~GLm~giElv~d~~tk~~~~~~a~~v~~~~~~~Gl~~~~~~gnvirl~PPL 432 (460)
T PRK06082 354 KVKADSQFMREKLLEMKAKYP-VIGDVRGIGLLWGIELVTDHETKTRAYDEAEAVLYQCLNNGLSFKVSQGNVIQLSPPL 432 (460)
T ss_pred HHHHHHHHHHHHHHHHHHCCC-CEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEECCC
T ss_conf 999999999999999986299-7885233654999997417765656679999999999968917910899989997991
Q ss_pred CCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 6889999999999999999852
Q gi|254780432|r 370 TITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 370 ~it~~eid~~i~~l~~al~~L~ 391 (392)
+||++|||+++++|+++|.++.
T Consensus 433 ~It~~eid~~l~~l~~al~ev~ 454 (460)
T PRK06082 433 IISREQLTEALAIFEEAIAKVC 454 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
T ss_conf 1899999999999999999999
No 51
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=745.53 Aligned_cols=380 Identities=32% Similarity=0.528 Sum_probs=339.7
Q ss_pred CCEECC--CCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC-CHHHHHHH
Q ss_conf 314515--588887489850103799679976464102267435787899999999999973145068757-81899999
Q gi|254780432|r 4 NDFLFN--TYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQ-STQQEIFA 80 (392)
Q Consensus 4 ~~~~~~--~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~-~~~~~~la 80 (392)
.+|+.+ +|.++|++|+||+|+||||.|||+||||+||+|+++|||+||+|++|+++|++++.|....+. ++...+|+
T Consensus 23 ~~~~~~~~~~~~~Piv~~rg~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~i~~Ai~~Q~~~l~~~~~~~~~~~~~~~la 102 (457)
T PRK05639 23 KRVLSTGIGVKLFPLVPKRGFGPFIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVKEQVELIQHSMIGYTHSERAIRVA 102 (457)
T ss_pred HHHCCCCCCCCCCCCEEEEEEECEEEECCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 86459988787568569972409899699698888054188667617969999999999864447657774887999999
Q ss_pred HHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 865201013--331235655540356777665432001347860023435465654321234553-21134799986433
Q gi|254780432|r 81 NHLIHSTFA--DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGG-KLQYLEGFGPKIEG 157 (392)
Q Consensus 81 ~~L~~~~~~--~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~-~~~~~~~~~p~~~~ 157 (392)
++|++..|. ++++|++|||||||+|||+||.+ |+|++||+|+++|||+|++++|+++ ...++++|+|..++
T Consensus 103 e~L~~~~P~~~~~v~f~~sGSEAvE~AiKlAr~~------t~r~~Iis~~~~yHG~T~ga~s~~~~~~~~~~~~~~~~~~ 176 (457)
T PRK05639 103 EKLVKISPIKNSKVIFGLSGSDAVDMAIKVSKFS------TRRPWILAFIGAYHGQTLGATSVASFQVSQKRGYSPLMPN 176 (457)
T ss_pred HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHC------CCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCC
T ss_conf 9999758988775998186589999999998642------5988699993577986514000146875445688888998
Q ss_pred CCCCCCHH---------------------HHHHHHHC------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 32221002---------------------68875410------1233222233322221124621012322110223457
Q gi|254780432|r 158 FDQAKFCD---------------------LQSLKNQI------SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDID 210 (392)
Q Consensus 158 ~~~~~~~d---------------------~~~l~~~~------~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g 210 (392)
+.++|+++ ++.+++.+ +++|||||+|||||++|+++||++||++||++|++||
T Consensus 177 ~~~~p~p~~~r~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~iAavi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g 256 (457)
T PRK05639 177 VFWLPYPNPYRNIWGINGYEEPNELINRVLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLNELG 256 (457)
T ss_pred CEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 47817986334533567633789999999999999998614688978999982766887986289899889999997639
Q ss_pred CEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 21310110034444555310111245453021034444443443210001112222233223453211110012334554
Q gi|254780432|r 211 ALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLN 290 (392)
Q Consensus 211 ~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 290 (392)
++||+|||||||||||+||++|++|++|||+|+||+|+||+|+|+|++++++++. .++.+++||+|||++||||+++|+
T Consensus 257 illI~DEV~tGfGRtG~~fa~e~~gv~PDii~~gKgl~~G~plsav~~~~~i~~~-~~g~~~~T~~gnpla~Aaa~a~L~ 335 (457)
T PRK05639 257 ILLVMDEVQTGIGRTGKWFASEWFSVKPDMIIFGKGVASGMGLSGVIGRKEIMDI-TSGSALLTPAANPVISAAAEATLE 335 (457)
T ss_pred CEEEEECCCCCCCCCCCHHHHHCCCCCCCEEEECCHHCCCCCCEEEEECHHHHHH-HCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 8687310322776256545664379999999977221079870799984887754-057655578865299999999999
Q ss_pred HHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH--------HHHHHHHHHCCEEEEECC--C
Q ss_conf 320122210112100002688999988679707550464009998724998--------999999996898996268--9
Q gi|254780432|r 291 IIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP--------ALLAAKFRDECLLTAPSS--D 360 (392)
Q Consensus 291 ~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~--------~~~~~~l~~~Gll~~~~~--~ 360 (392)
+++++++++|++++|++|.++|++|+++| ++|.+|||+|||+++|++.+. ..+..+++++|+++.+.+ +
T Consensus 336 ~i~~~~l~~~a~~~g~~l~~~L~~L~~~~-~~v~dVRG~GL~~giel~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g~~~ 414 (457)
T PRK05639 336 IIEEENLLKNALEVGNFIMKRLEEMKEVF-EIIGDVRGKGLMIGVEIVKENGRPDPEMTGKICWRAFELGLILPSYGMFG 414 (457)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCCCCC
T ss_conf 99965599999999999999999988638-97565503780999999437899899999999999996796881589999
Q ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8899558986889999999999999999852
Q gi|254780432|r 361 NVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 361 ~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
|+|||.|||+||++|||+++++|+++|.+..
T Consensus 415 nvirl~PPL~it~~eid~~~~il~~al~ea~ 445 (457)
T PRK05639 415 NVIRITPPLVLTKEVAEKGLEIIERAIKDAL 445 (457)
T ss_pred CEEEEECCEECCHHHHHHHHHHHHHHHHHHH
T ss_conf 9899978931689999999999999999997
No 52
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=0 Score=744.12 Aligned_cols=387 Identities=27% Similarity=0.457 Sum_probs=339.6
Q ss_pred CCCEECCCCCC----CCE-EEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCHHH
Q ss_conf 43145155888----874-8985010379967997646410226743578789999999999997314506-87578189
Q gi|254780432|r 3 KNDFLFNTYDQ----SDI-RFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQSTQQ 76 (392)
Q Consensus 3 ~~~~~~~~~~~----~p~-~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~~~~ 76 (392)
+++|+||+|.+ .|+ +|+||+|+|+||.|||+||||.+|+|++++||+||+|++|+++|++++.++. ..+.++..
T Consensus 10 d~~~~~h~~~~~~~~~p~~~i~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~l~~~~~~~~~~~~~ 89 (429)
T PRK06173 10 DRQHIWHPYSSVTDPIPLYPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLSKMSHIMFGGFTHEPA 89 (429)
T ss_pred HHHHCCCCCCCCCCCCCCCCEEECCCCEEEECCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 99657888766678899701684621789979999999856328853237998999999999997577855677577799
Q ss_pred HHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 999986520101--33312356555403567776654320013478600234354656543212345532113-479998
Q gi|254780432|r 77 EIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQY-LEGFGP 153 (392)
Q Consensus 77 ~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~-~~~~~p 153 (392)
.+|+++|++..| ++||+|+||||||||+|||+||+|+..++.|+|++|++|++||||+|.+++|+++.... +..+.+
T Consensus 90 ~~lae~L~~~~p~~l~~v~f~~SGsEAvE~AiKlA~~y~~~~g~~~r~~ii~~~~~yHG~T~~a~s~~~~~~~~~~~~~~ 169 (429)
T PRK06173 90 VELAQLLLEILPPELNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNS 169 (429)
T ss_pred HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCC
T ss_conf 99999999847977587997186599999999999999997289876526750588588757677605764466666678
Q ss_pred CCCC-----CCCCC------CHHHHHHHH---HCCCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 6433-----32221------002688754---10123322223332-222112462101232211022345721310110
Q gi|254780432|r 154 KIEG-----FDQAK------FCDLQSLKN---QISNDTAAILIEPI-QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV 218 (392)
Q Consensus 154 ~~~~-----~~~~~------~~d~~~l~~---~~~~~iAavi~Epv-~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV 218 (392)
..+. ....+ ..+++.+++ ...++|||||+||+ ||+||+++||++||++||++|++||++||+|||
T Consensus 170 ~~p~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAavi~EPi~qg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV 249 (429)
T PRK06173 170 SLPVQYFLPQPSVKFGEAWRDEAIEPLQDLLEQHGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEI 249 (429)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 89865346899876565422779999999998558863699998644678986678999999999875124855773013
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 034444555310111245453021034444443-443210001112222233-----22345321111001233455432
Q gi|254780432|r 219 QTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQG-----SHGSTYGGNVLAMVLGEKVLNII 292 (392)
Q Consensus 219 ~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~-----~~~~T~~gnpl~~aaa~a~L~~l 292 (392)
||||||||+||++|++||+|||+|+||+||||| |+|+++++++|++.+.++ .|++||+|||++||||+++|+++
T Consensus 250 ~tGfGRtG~~fa~e~~gv~PDivt~gKglggG~~P~~avi~~~~i~~~~~~g~~~~f~hg~T~~Gnpla~Aaa~a~L~~i 329 (429)
T PRK06173 250 ATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEEIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLL 329 (429)
T ss_pred CCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 20687366844532368999789855445688776178987689996424687666352789986899999999999999
Q ss_pred HCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEEECCCCEEEECCCCC
Q ss_conf 012221011210000268899998867970755046400999872499--899999999689899626898899558986
Q gi|254780432|r 293 QSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTAPSSDNVVRILPPLT 370 (392)
Q Consensus 293 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~ 370 (392)
+++++++|++++|++|+++|++++ ++| .|.+|||+|+|+++|+..+ ...+.++++++|+++.+.+ |+|||.|||+
T Consensus 330 ~~~~l~~~~~~~g~~l~~~L~~~~-~~~-~v~dVRG~Gl~~~iel~~~~~~~~l~~~~~~~Gll~~~~g-~~l~l~PPL~ 406 (429)
T PRK06173 330 LESPWQQNIQRIERQLRQELSPAA-EFD-YVAEVRVLGAIGVVEMKSPVDMATLQPRFVEHGIWVRPFG-KLVYLMPPFI 406 (429)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHC-CCC-CEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEECC-CEEEEECCCC
T ss_conf 864699999999999999999631-699-6687423572999994684569999999996995898349-9899958936
Q ss_pred CCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8899999999999999998529
Q gi|254780432|r 371 ITAEEIHEGLERIERTAIKLSH 392 (392)
Q Consensus 371 it~~eid~~i~~l~~al~~L~~ 392 (392)
||++|||+++++|+++|.|..|
T Consensus 407 it~~ei~~~~~~l~~aL~e~~~ 428 (429)
T PRK06173 407 ISQDELTQLTSGLLRVLTQEYN 428 (429)
T ss_pred CCHHHHHHHHHHHHHHHHHHHC
T ss_conf 8999999999999999999854
No 53
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=741.99 Aligned_cols=380 Identities=30% Similarity=0.513 Sum_probs=338.0
Q ss_pred CCCEECCCCCC-CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHH
Q ss_conf 43145155888-874898501037996799764641022674357878999999999999731450-6875781899999
Q gi|254780432|r 3 KNDFLFNTYDQ-SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHV-SNLYQSTQQEIFA 80 (392)
Q Consensus 3 ~~~~~~~~~~~-~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~-~~~~~~~~~~~la 80 (392)
+.++.+++|.+ +|++|+||+|+||||.|||+||||+||+|++++||+||+|++|+++|+++..+. ...+.++...+|+
T Consensus 23 ~~~~~~~~~~~~~P~~i~rg~G~~l~D~dG~~yLD~~sg~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la 102 (454)
T PRK06931 23 EMESNVRSYPRKLPLAIAKAQGCWVTDVEGNEYLDCLAGAGTLALGHNHPAVMQSIQDVLDSGLPLHTLDLTTPLKDAFS 102 (454)
T ss_pred HHCCHHCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHH
T ss_conf 74112215798999508983648899798899989163177554617959999999999862887112776867999999
Q ss_pred HHHHHHCCC--CCC---CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 865201013--331---235655540356777665432001347860023435465654321234553211347999864
Q gi|254780432|r 81 NHLIHSTFA--DRV---FFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKI 155 (392)
Q Consensus 81 ~~L~~~~~~--~~v---~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~ 155 (392)
++|++..|. +++ ||++|||||||+|||+||+| |+|++||+|++||||+|.+++|+|+++.+++.+.|..
T Consensus 103 e~L~~~~p~~~~~~~~~F~~~SGSEAvE~AlKlAr~~------tgR~~iis~~~sYHG~T~gals~tg~~~~~~~~~~l~ 176 (454)
T PRK06931 103 EELLSFLPGEKDEYCLQFTGPSGADAVEAAIKLAKTY------TGRSNVISFSGGYHGMTHGALSLTGNLSAKNAVNGLM 176 (454)
T ss_pred HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH------CCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 9999847765672489973897489999999998760------6998199980688997433531107965222568889
Q ss_pred CCCCCCCCHHH-------------HHH-------HHH---CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE
Q ss_conf 33322210026-------------887-------541---0123322223332222112462101232211022345721
Q gi|254780432|r 156 EGFDQAKFCDL-------------QSL-------KNQ---ISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDAL 212 (392)
Q Consensus 156 ~~~~~~~~~d~-------------~~l-------~~~---~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~l 212 (392)
+++.++|+++. +++ .+. ..+++||||+|||||+||+++||++||++||++|++||++
T Consensus 177 p~~~~~p~p~~~r~p~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~AAviiEPiqg~gG~~~~p~~yl~~lr~lc~~~gil 256 (454)
T PRK06931 177 PGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVVKPAAVILEAIQGEGGVVPAPVSWLQKIREVTQKHGIL 256 (454)
T ss_pred CCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEE
T ss_conf 99668079752357667762336999999999999999706887259999476688897618889988999875116818
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 31011003444455531011124545302103444444344321000111222223322345321111001233455432
Q gi|254780432|r 213 LIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNII 292 (392)
Q Consensus 213 lI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l 292 (392)
||+|||||||||||+||++|++|++|||+|+||+||||+|+++++.+++ ++.+.++.|++||+|||++||||+++|+++
T Consensus 257 lI~DEV~tGfGRTG~~fa~e~~gv~PDIi~~gKglggG~P~a~~~~~~~-~~~~~~~~h~~T~~Gnpla~Aaala~L~~i 335 (454)
T PRK06931 257 LIVDEVQAGFARSGKMFAFEHAGIEPDIVVMSKAVGGGLPLAVLGIKKE-FDAWQPAGHTGTFRGNQLAMATGLATLKIL 335 (454)
T ss_pred EEECCCCCCCCCCCCCCHHCCCCCCCCEEEEHHHHCCCCCEEEEEEHHH-HCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9950344377867784121025889896002153248885489987555-524678886645689847889999999999
Q ss_pred HCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH----------------HHHHHHHHHCCEEEE
Q ss_conf 0122210112100002688999988679707550464009998724998----------------999999996898996
Q gi|254780432|r 293 QSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP----------------ALLAAKFRDECLLTA 356 (392)
Q Consensus 293 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------------~~~~~~l~~~Gll~~ 356 (392)
+++++++|++++|++|+++|+++.++|| +|.+|||+|||++||++.+. ..+.+.++++|+++.
T Consensus 336 ~~e~l~~~~~~~G~~l~~~L~~l~~~~p-~V~dVRG~GL~~giElv~~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~ 414 (454)
T PRK06931 336 RDENLAQNAQERGEWLTAALRELSKEYP-CIGNVRGRGLMIGIEIVDERKPADATGSYPADGELAAAIQKACFNNKLLLE 414 (454)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHCCC-CEEEECCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 8624999999999999999999987099-888631374489999800676432235566668999999999997896895
Q ss_pred EC--CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 26--89889955898688999999999999999985
Q gi|254780432|r 357 PS--SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 357 ~~--~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+. .+|+|||+|||+||++|||+++++|+++|.++
T Consensus 415 ~~g~~~nvlr~~PPL~it~~eid~~l~~l~~al~e~ 450 (454)
T PRK06931 415 RGGRNGNVVRLLCPLNITQAECEEFIKRFKQAVAEA 450 (454)
T ss_pred ECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 468999989997990168999999999999999999
No 54
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=745.22 Aligned_cols=369 Identities=27% Similarity=0.469 Sum_probs=324.6
Q ss_pred CCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--C
Q ss_conf 88887489850103799679976464102267435787899999999999973145068757818999998652010--1
Q gi|254780432|r 11 YDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHST--F 88 (392)
Q Consensus 11 ~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~--~ 88 (392)
||.-|+.|+||+|+|+||.+||+|||+.+|. ..+||+||+|++|+++|++++ ++++.|.++...+|||+|++.. +
T Consensus 564 ~Y~~Pi~ivRGeg~~L~D~~Gr~YLD~~~~V--~~vGH~hP~v~~A~~~Q~~~L-~~~s~~~~~~~~elAerL~~~~P~~ 640 (972)
T PRK06149 564 YYAAPPQIERGWRNYLIDMQGRSYLDMVNNV--TVLGHGHPRMAAAAARQWSLL-NTNSRFHYAAVAEFSERLAALAPDG 640 (972)
T ss_pred CCCCCCEEEECCCCEEECCCCCEEEEECCCC--CCCCCCCHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 3689971686040279968998887704772--445678999999999999974-5176636515999999999857656
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC--------
Q ss_conf 333123565554035677766543200134786002343546565432123455321134-79998643332--------
Q gi|254780432|r 89 ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYL-EGFGPKIEGFD-------- 159 (392)
Q Consensus 89 ~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~-~~~~p~~~~~~-------- 159 (392)
+++|||+||||||||+||||||+| |||++||+++++|||+|.+++++|+....+ +.+...+..+.
T Consensus 641 l~~vfF~nSGsEAnE~AlKlAr~~------tGr~~iI~~~~ayHG~T~ga~a~s~~~~~~~~~~~~~p~~v~~~~~P~~y 714 (972)
T PRK06149 641 LDTVFLVNSGSEANDLAIRLAWAA------SGGRDVLSVLEAYHGWTVATDAVSTSIADNPQALTTRPDWVHPVESPNTF 714 (972)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHH------HCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCC
T ss_conf 266985077499999999999996------28997799968708826788986334345766767899843660687445
Q ss_pred CCCC----------HHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 2210----------0268875410---12332222333222211246210123221102234572131011003444455
Q gi|254780432|r 160 QAKF----------CDLQSLKNQI---SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG 226 (392)
Q Consensus 160 ~~~~----------~d~~~l~~~~---~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG 226 (392)
..+| .+++...+.+ .+++||||+|||||+||.+++|++||++++++|++||+++|+|||||||||||
T Consensus 715 r~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~Aa~I~EPI~G~gG~i~~P~gyl~~v~~~c~~~g~LlI~DEVQtG~GRtG 794 (972)
T PRK06149 715 RGKFRGADSAADYLRDVVAQLEDLDARGRQLAGFICEPVYGNAGGISLPDGYLRQVYAAVRARGGVCIADEVQVGYGRLG 794 (972)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 67778864078999999999999971589668999957647778737987999999999997497899613221778576
Q ss_pred CCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 531-0111245453021034444443443210001112222-23322345321111001233455432012221011210
Q gi|254780432|r 227 KLF-AYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACM-NQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINI 304 (392)
Q Consensus 227 ~~f-~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~-~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~ 304 (392)
+|| ++|++|++|||+|+||+||||||+|||+++++|++.+ .++.|++||+|||++||||+++|++|++++|++|++++
T Consensus 795 ~~Fwa~e~~gv~PDIvt~aKglg~G~PlgAvv~~~eia~~f~~~g~~~sTfgGnPlacAaalavL~vi~~e~L~~na~~~ 874 (972)
T PRK06149 795 HYFWGFEQQGVVPDIITMAKGMGNGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCAIGMAVLDVMREEKLQENARRV 874 (972)
T ss_pred CCCCHHHHCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 63004454299987798645555886647889749999765268860058998989999999999999873699999999
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH----------HHHHHHHHHCCEEEEECC--CCEEEECCCCCCC
Q ss_conf 0002688999988679707550464009998724998----------999999996898996268--9889955898688
Q gi|254780432|r 305 AKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP----------ALLAAKFRDECLLTAPSS--DNVVRILPPLTIT 372 (392)
Q Consensus 305 g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------~~~~~~l~~~Gll~~~~~--~~~irl~Ppl~it 372 (392)
|++|+++|++|+++|| +|.+|||+|||+|+|++.++ ..++.+++++||++.+.| +|+||+.|||+||
T Consensus 875 G~~l~~~L~~L~~~~p-~IgdVRG~GLm~GiElV~d~~t~~Pa~~~~~~i~~~~~e~Gil~~~~G~~~nVlki~PPL~i~ 953 (972)
T PRK06149 875 GDHLKARLEALVDRHP-LAGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCTD 953 (972)
T ss_pred HHHHHHHHHHHHHHCC-CEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCCCCC
T ss_conf 9999999999986199-489862267289999701667689888999999999997895894278988879980894676
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998
Q gi|254780432|r 373 AEEIHEGLERIERTAIK 389 (392)
Q Consensus 373 ~~eid~~i~~l~~al~~ 389 (392)
++++|+++++|+++|.|
T Consensus 954 ~e~~D~~l~~l~~vL~E 970 (972)
T PRK06149 954 RESADFFVDMLDRVLTE 970 (972)
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999999855
No 55
>PRK09044 consensus
Probab=100.00 E-value=0 Score=742.98 Aligned_cols=385 Identities=29% Similarity=0.448 Sum_probs=341.2
Q ss_pred CCCCEECCCCC-----CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCHH
Q ss_conf 84314515588-----887489850103799679976464102267435787899999999999973145068-757818
Q gi|254780432|r 2 NKNDFLFNTYD-----QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQSTQ 75 (392)
Q Consensus 2 ~~~~~~~~~~~-----~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~~ 75 (392)
.+++|+||.|. |.|++|+||+|+|+||.|||+||||.||+|+++|||+||+|++|+++|+++++|+.. .+.++.
T Consensus 7 ~d~~~~w~~~~~~~~~~~P~~i~r~~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Ai~~Q~~~l~~~~~~~~~~~~ 86 (418)
T PRK09044 7 AGLPHIWLPYAQMKTAPPPLPVVRTEGSRLYLADGRELVDGVASWWTACHGYNHPHIAEAVREQLDRMPHVMFGGLAHEP 86 (418)
T ss_pred HHHHHCCCCCCCCCCCCCCEEEEEEECCEEEECCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 10865088988988899985689836598997999999890227796522689899999999999758883458746779
Q ss_pred HHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 9999986520101--333123565554035677766543200134786002343546565432123455321-1347999
Q gi|254780432|r 76 QEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL-QYLEGFG 152 (392)
Q Consensus 76 ~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~ 152 (392)
..+|+++|++..| ++|++|+||||||||+|||+||+|+..++.|+|++||+|+++|||+|++++|+++.. .++..|.
T Consensus 87 ~~~la~~L~~~~p~~l~~v~f~~SGsEAvE~AiKlA~~y~~~r~~tgr~~ii~~~~~yHG~T~ga~s~~~~~~~~~~~~~ 166 (418)
T PRK09044 87 AYRLASRLAAILPGDLERVFFSDSGSVAVEVAMKMAVQYWLNRGERGRTKFLAFRGGYHGDTLATMAVCDPEEGMHSLFA 166 (418)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCC
T ss_conf 99999999985788758698628678999999999999998624567762899618777866666211577557667778
Q ss_pred CCCCCCCCCCC----HH---HHHHHHHCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 86433322210----02---6887541012332222333-2222112462101232211022345721310110034444
Q gi|254780432|r 153 PKIEGFDQAKF----CD---LQSLKNQISNDTAAILIEP-IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 153 p~~~~~~~~~~----~d---~~~l~~~~~~~iAavi~Ep-v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
+..+.....++ .+ ++.+.+...++|||||+|| |||++|+++||++||++||++|++||+|||+|||||||||
T Consensus 167 ~~~p~~~~~~~p~~~~~~~~l~~~~~~~~~~iAavi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~GR 246 (418)
T PRK09044 167 GVLPEQVIADLPRDAASEAALDALLERHGGEIAAILVEPLVQGAGGMLFHDPEVLRRLRRLADRHGLLLIFDEIFTGFGR 246 (418)
T ss_pred CCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCC
T ss_conf 98997614579998678999999997579977899994663578987489889999999999874986772122036876
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCC-CCCCCCCCCCCCCCCCC---C---CCCCCCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 55531011124545302103444444-34432100011122222---3---32234532111100123345543201222
Q gi|254780432|r 225 TGKLFAYEWANVKPDIMTIAKGMGGG-FPIGACLATNEVAACMN---Q---GSHGSTYGGNVLAMVLGEKVLNIIQSDGF 297 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~~~gK~l~gG-~P~sav~~~~~i~~~~~---~---~~~~~T~~gnpl~~aaa~a~L~~l~~~~l 297 (392)
||+||++|++||+|||+|+||+|+|| +|+||+++++++++.+. + ..|++||+|||++||||+++|++++++++
T Consensus 247 tG~~fa~~~~gv~PDivt~gKgl~gG~~Plsav~~~~~i~~~~~~~~~~~~~~hg~T~~gnpl~cAaala~L~~i~~~~l 326 (418)
T PRK09044 247 TGTMFAFEQAGVVPDIVTLSKALTGGTLPLAATVASRRVFEAFWSDDPGHALMHGPTYMGNPLACAAANASLDLFEDEPR 326 (418)
T ss_pred CCCCCHHHHCCCCCCEEEECHHCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH
T ss_conf 67853233259588724302001488776102355399999750379875502178888998999999999999973479
Q ss_pred CCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHH
Q ss_conf 1011210000268899998867970755046400999872499--89999999968989962689889955898688999
Q gi|254780432|r 298 LENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEE 375 (392)
Q Consensus 298 ~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~e 375 (392)
.+|++++|++|.++|+++.+ +| .|.+|||+|+|+++|+..+ ...+.++|+++|+++.+.+ |+|||.|||+||++|
T Consensus 327 ~~~~~~~g~~l~~~L~~~~~-~~-~v~~VRG~Glm~~iel~~~~~~~~~~~~~~~~Gv~v~~~g-n~irl~PpL~it~~e 403 (418)
T PRK09044 327 LEQVAAIEAQLRAGLEPCRD-LP-GVVDVRVLGAIGVVELERIPPLDDLRARFVDRGVWIRPFR-NIVYLTPAFTIAEDD 403 (418)
T ss_pred HHHHHHHHHHHHHHHHHHCC-CC-CEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCCEEEECC-CEEEEECCCCCCHHH
T ss_conf 99999999999999997536-99-7798800557999993685769999999997897797459-999997995789999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999998
Q gi|254780432|r 376 IHEGLERIERTAIK 389 (392)
Q Consensus 376 id~~i~~l~~al~~ 389 (392)
||+++++|++++.|
T Consensus 404 id~~~~~l~~~l~E 417 (418)
T PRK09044 404 LARLTAAIRQVVAE 417 (418)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999857
No 56
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=0 Score=740.20 Aligned_cols=380 Identities=31% Similarity=0.547 Sum_probs=338.6
Q ss_pred CEECCCCCC-CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCHHHHHHHHH
Q ss_conf 145155888-87489850103799679976464102267435787899999999999973145068-7578189999986
Q gi|254780432|r 5 DFLFNTYDQ-SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQSTQQEIFANH 82 (392)
Q Consensus 5 ~~~~~~~~~-~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~~~~~la~~ 82 (392)
+.-+++|.+ +|++|+||+|+||||.|||+|||++||+|++|+||+||+|.+|+++|+++....+. .+.++...+++++
T Consensus 11 ~s~~~~y~~~~Pivi~ra~G~~l~D~dG~~ylD~~sg~~~~~lGH~~p~I~~Ai~~ql~~~~~~h~~~~~~~~~~~l~e~ 90 (426)
T PRK09264 11 ESEVRSYCRSFPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTEAKREFLET 90 (426)
T ss_pred CCCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 43304578899934998453989989989999837059853005897999999999998548600134212899999999
Q ss_pred HHHH----CCCC-CCCCCC-CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 5201----0133-312356-555403567776654320013478600234354656543212345532113479998643
Q gi|254780432|r 83 LIHS----TFAD-RVFFTN-SGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIE 156 (392)
Q Consensus 83 L~~~----~~~~-~v~f~~-SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~ 156 (392)
|.+. .+++ +|+|++ |||||||+|||+||+| |||++||+|+++|||+|++++|+|+++.++.++++..+
T Consensus 91 l~~~il~p~~l~~~v~F~~~SGSEAvE~AiKlAR~~------tgr~~Iis~~~~YHG~T~gals~tg~~~~~~~~~~~~~ 164 (426)
T PRK09264 91 FERLILKPRGLDYKVQFTGPTGTNAVEAALKLARKV------TGRTNIISFTNGFHGMTLGALAVTGNAHKRGGAGVPLN 164 (426)
T ss_pred HHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH------CCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf 999735755798048955898227999999999983------49985999837757874145550378434577889978
Q ss_pred CCCCCCCH--------HHHHHHHHCC------CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCC
Q ss_conf 33222100--------2688754101------233222233322221124621012322110223457213101100344
Q gi|254780432|r 157 GFDQAKFC--------DLQSLKNQIS------NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGY 222 (392)
Q Consensus 157 ~~~~~~~~--------d~~~l~~~~~------~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~ 222 (392)
++.++||+ +++.+++.+. +++||||+|||||+||+++||++||+.||++|++||+|||+|||||||
T Consensus 165 ~~~~~P~~~~~~~~~~~~~~~e~~l~~~~~g~d~iAAviiEPiqg~gG~~~~p~~yl~~lr~lc~~~giLlI~DEV~tGf 244 (426)
T PRK09264 165 HVTFMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGLNVASAEWLQRLEKLCRKHDILLIVDDIQAGC 244 (426)
T ss_pred CCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCC
T ss_conf 81772788866787016999999987623788861699987866888982499899999999998707506733201077
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HCCCCCCH
Q ss_conf 4455531011124545302103444444-344321000111222223322345321111001233455432-01222101
Q gi|254780432|r 223 GRTGKLFAYEWANVKPDIMTIAKGMGGG-FPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNII-QSDGFLEN 300 (392)
Q Consensus 223 GRtG~~f~~e~~gi~PDi~~~gK~l~gG-~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l-~~~~l~~~ 300 (392)
||||+||++|++||+|||+|+||+|+|| +|+|+|++++++ +.+.++.|++||+|||++|+||+++|+++ +++++.++
T Consensus 245 GRTG~~fa~e~~gv~PDiv~~gKglsGgg~P~sav~~~~e~-d~~~~g~h~~Tf~Gnp~a~aaa~a~L~~~~~~~~l~~~ 323 (426)
T PRK09264 245 GRTGTFFSFEEAGIKPDIVTLSKSISGYGLPMALVLIKPEL-DQWKPGEHNGTFRGNNLAFVTATAALETYWSDDAFEKE 323 (426)
T ss_pred CCCCCCCCCCCCCCCCCEEEECHHHCCCCCCEEEEEECHHH-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHH
T ss_conf 86778302104799987798864336897104999973444-04677544667788829999999999999871479999
Q ss_pred HHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEEECC--CCEEEECCCCCCCHHHH
Q ss_conf 1210000268899998867970755046400999872499--8999999996898996268--98899558986889999
Q gi|254780432|r 301 VINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTAPSS--DNVVRILPPLTITAEEI 376 (392)
Q Consensus 301 ~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~~~~--~~~irl~Ppl~it~~ei 376 (392)
++++|++|.++|++++++||+++.+|||+|||+++|++.+ ...+.+.++++||++...+ +|+|||.|||+||++||
T Consensus 324 v~~~g~~l~~~L~~l~~~~~~~v~dvRG~Glm~giel~~~~~~~~i~~~~~~~Gll~~~~g~~~~vir~~PPL~it~~ei 403 (426)
T PRK09264 324 VKRKGELVRERLEEIAAEYPGLGLSVRGRGMMQGIDFGDGELAGKICRRAFENGLIIETSGPNDEVVKLLPPLTIDEEEL 403 (426)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCEECCHHHH
T ss_conf 99999999999999997689962788860289999937768899999999978988964489998899979920889999
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 999999999999852
Q gi|254780432|r 377 HEGLERIERTAIKLS 391 (392)
Q Consensus 377 d~~i~~l~~al~~L~ 391 (392)
|+++++|++++.+|.
T Consensus 404 d~~~~~l~~al~~vl 418 (426)
T PRK09264 404 EEGLDILEEAVAEVL 418 (426)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999999
No 57
>PRK08555 consensus
Probab=100.00 E-value=0 Score=740.30 Aligned_cols=378 Identities=36% Similarity=0.639 Sum_probs=341.5
Q ss_pred CCEECCC---CCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCHHHHHH
Q ss_conf 3145155---8888748985010379967997646410226743578789999999999997314506-87578189999
Q gi|254780432|r 4 NDFLFNT---YDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQSTQQEIF 79 (392)
Q Consensus 4 ~~~~~~~---~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~~~~~~l 79 (392)
++|..++ ++++|++|+||+|+||||.|||+|||+++|+|+++|||+||+|++|+++|+++++|++ ..+.++...+|
T Consensus 21 ~~~~~~~~~~~~~~P~~i~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~l~~~~~~~~~~~~~~~l 100 (443)
T PRK08555 21 HKYLATTTQDPESLPLVIERGEGVYVYDVDGNVYLDFSSGIGVNNLGHSHPRVIEAVEEQLHKLWHAAGTDFYNEYQVEL 100 (443)
T ss_pred HHHCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 86538866778887817998465999979889999905327642124897999999999986176746564368899999
Q ss_pred HHHHHHHCCC---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf 9865201013---33123565554035677766543200134786002343546565432123455321-1347999864
Q gi|254780432|r 80 ANHLIHSTFA---DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL-QYLEGFGPKI 155 (392)
Q Consensus 80 a~~L~~~~~~---~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~p~~ 155 (392)
+++|++..|. .+|+|+||||||||+|||+||+| |+|++||+|++||||+|++++|+|+.. .++..++|..
T Consensus 101 ae~L~~~~p~~~~~~v~f~~SGSEAvE~AiklAr~~------tgr~~ii~~~~~yHG~t~g~~s~t~~~~~~~~~~~p~~ 174 (443)
T PRK08555 101 AKKLVEIAPGDFEKKVFFSNSGTEANEAALKIAKWY------TGRKMFIAFIGAFHGRTQGSLSLTASKPVQRSGFFPTM 174 (443)
T ss_pred HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHH------CCCCEEEEEECCCCCCCCCCEEEECCCCHHCCCCCCCC
T ss_conf 999998577565655998087788999999998873------79988999958707897211687258501104778999
Q ss_pred CCCCCCCCHH---------------------HHHHHHHC------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 3332221002---------------------68875410------12332222333222211246210123221102234
Q gi|254780432|r 156 EGFDQAKFCD---------------------LQSLKNQI------SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDD 208 (392)
Q Consensus 156 ~~~~~~~~~d---------------------~~~l~~~~------~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~ 208 (392)
+++.++|+++ ++.+++.+ +++|||||+|||||+||+++||++||++||++|++
T Consensus 175 ~~~~~vp~p~~~r~p~~~~~~~~~~~~~~~~~~~ie~~i~~~~~~~~~iAavi~EPi~g~gG~~~pp~~yl~~l~~lc~~ 254 (443)
T PRK08555 175 PGVEHVPYPNPYRNPWGIDGYENPDELVNRVIDYIEEYLFEHYVPPEEVAGIFFEPIQGEGGYVVPPKNFFKELKKLADK 254 (443)
T ss_pred CCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99368168862246445666569999999999999999986257989889999958768889875887887899999997
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 57213101100344445553101112454530210344444434432100011122222332234532111100123345
Q gi|254780432|r 209 IDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKV 288 (392)
Q Consensus 209 ~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~ 288 (392)
||++||+|||||||||||+||++|++|++|||+|+||+||||+|+|||++++++ +...++.|++||+|||++||||+++
T Consensus 255 ~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gKgl~~G~Pl~av~~~~e~-~~~~~~~h~~T~~gnpla~aaa~a~ 333 (443)
T PRK08555 255 YGILLIDDEVQMGLGRTGKMFAIEHFGVEPDIITLAKALGGGIPIGATIFRADL-DFKKPGLHSNTFGGNALASAAGLAV 333 (443)
T ss_pred CCCEEECCCCCCCCCCCCCCCEECCCCCCCCEEEECCCCCCCCCEEEEEEHHHH-CCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 494696354412787024741231688899889977424488750899982453-5577777376888548999999999
Q ss_pred HHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH----------HHHHHHHHHCCEEEEEC
Q ss_conf 54320122210112100002688999988679707550464009998724998----------99999999689899626
Q gi|254780432|r 289 LNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP----------ALLAAKFRDECLLTAPS 358 (392)
Q Consensus 289 L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------~~~~~~l~~~Gll~~~~ 358 (392)
|++++ +++++|++++|++|+++|++|+++|+ .|.+|||.|||+++|++.+. ..+...++++|+++.+.
T Consensus 334 L~~i~-e~l~~~~~~~g~~l~~~L~~l~~~~~-~v~dvRG~Gl~~gielv~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~ 411 (443)
T PRK08555 334 IEEIK-EGLLENVQKLGKYFRERLEELKEKYE-IIGDVRGLGLAWAIEFVKDRKTKEPNPKLRDRVVVEAFKRGLILLGC 411 (443)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCC-CEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEC
T ss_conf 99999-77999999999999999999886199-77872326679999982377656779899999999999789099737
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89889955898688999999999999999985
Q gi|254780432|r 359 SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 359 ~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
++|+|||+|||+||++|||+++++|+++|.+|
T Consensus 412 g~n~ir~~PPL~it~~eid~~~~~l~~al~~V 443 (443)
T PRK08555 412 GKSAIRLIPPLIISEEEAKIGLEILEEAIKVV 443 (443)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99989997794388999999999999999639
No 58
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=739.95 Aligned_cols=380 Identities=29% Similarity=0.508 Sum_probs=336.6
Q ss_pred CCCEECCCCCC----CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 43145155888----87489850103799679976464102267435787899999999999973145068757818999
Q gi|254780432|r 3 KNDFLFNTYDQ----SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEI 78 (392)
Q Consensus 3 ~~~~~~~~~~~----~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~ 78 (392)
|++|+||.|.+ .|++|+||+|+||||.|||+||||++|+|+++|||+||+|++|+++|++++.++++.+.++...+
T Consensus 3 d~~~~~hp~~~~~~~~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~ 82 (434)
T PRK06062 3 DRAHVFHSWSAQGKINPLVIAAAEGSYVWDYEGNRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSE 82 (434)
T ss_pred CHHHCCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf 43126788888899899379981338899797899998606178676568979999999999975476467524599999
Q ss_pred HHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9986520101--33312356555403567776654320013478600234354656543212345532113479998643
Q gi|254780432|r 79 FANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIE 156 (392)
Q Consensus 79 la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~ 156 (392)
++++|++..| +++++|+||||||||+|||+||.| |+|++||+++++|||+|.+++++|+++.++... +..+
T Consensus 83 la~~l~~~~p~~~~~v~f~~SGsEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~-~~~~ 155 (434)
T PRK06062 83 AARLIAERAPGDLSKVFFTNGGADANEHAVRMARLH------TGRPKVLSAYRSYHGGTGTAINLTGDPRRWPND-TGNA 155 (434)
T ss_pred HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH------CCCCCEEEEECCCCCCCCCEEEEECCCCCCCCC-CCCC
T ss_conf 999999747777587998378438999999999985------299837664046678865207840682014688-8889
Q ss_pred CCCC--------CCCH----------HHHHHHHHC----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEE
Q ss_conf 3322--------2100----------268875410----12332222333222211246210123221102234572131
Q gi|254780432|r 157 GFDQ--------AKFC----------DLQSLKNQI----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLI 214 (392)
Q Consensus 157 ~~~~--------~~~~----------d~~~l~~~~----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI 214 (392)
++.+ .+++ .++.+++.+ +++|||||+|||||++|+++||++||+++|++|++||++||
T Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~l~~~i~~~~~~~iAAvivEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI 235 (434)
T PRK06062 156 GVVHFFGPFLYRSSFHATTEEEECERALAHLERVIALEGPSTIAAIVLESVPGTAGIMVPPPGYLAGVRELCDRHGIVFI 235 (434)
T ss_pred CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 95341588766766778886899999999999999851999779999478678899866876787689999998595067
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 0110034444555310111245453021034444443-44321000111222223--32234532111100123345543
Q gi|254780432|r 215 FDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQ--GSHGSTYGGNVLAMVLGEKVLNI 291 (392)
Q Consensus 215 ~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~--~~~~~T~~gnpl~~aaa~a~L~~ 291 (392)
+|||||||||||+||++|++||+|||+|+||+||||| |+|||+++++|++.+.. ..+++||+|||++||||+++|++
T Consensus 236 ~DEV~TG~GRtG~~fa~e~~gv~PDiv~~gK~l~gG~~Plsav~~~~~i~~~~~~~~~~~g~T~~Gnpla~Aaa~a~L~~ 315 (434)
T PRK06062 236 ADEVMAGFGRTGKWFAIEHFDVVPDLITFAKGVNSGYVPLGGVAISEAIADTFADRPYPGGLTYSGHPLACAAAVATINA 315 (434)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 46432278766664210058979762101033148877617887459999874226756787888987999999999999
Q ss_pred HHCCCCCCHHHHHCCH-HHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH----------------HHHHHHHHHCCEE
Q ss_conf 2012221011210000-2688999988679707550464009998724998----------------9999999968989
Q gi|254780432|r 292 IQSDGFLENVINIAKI-LFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP----------------ALLAAKFRDECLL 354 (392)
Q Consensus 292 l~~~~l~~~~~~~g~~-l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------------~~~~~~l~~~Gll 354 (392)
++++++++|++++|++ |+++|++++++|| .|.+|||+|||++||++.++ ..+...++++|++
T Consensus 316 i~~~~l~~~~~~~G~~~l~~~L~~l~~~~p-~v~~VRG~GL~~gielv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~Gll 394 (434)
T PRK06062 316 MEEEGIVENAARIGAEVLGPGLRELAERHP-SVGEVRGLGVFWALELVADRETREPLVPYGAASAAMAAVVAACKERGLL 394 (434)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHCC-CEEEEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 973589999999999999999999986589-8688861662699998226443555554433279999999999979927
Q ss_pred EEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9626898899558986889999999999999999852
Q gi|254780432|r 355 TAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 355 ~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+.+. +|+|||.|||+||++|||+++++|+++|.++.
T Consensus 395 ~~~~-gn~irl~PpL~it~~eid~~l~~l~~al~~~~ 430 (434)
T PRK06062 395 PFVN-GNRIHVVPPCTVTEDEVREGLAILDAALAVAD 430 (434)
T ss_pred EEEC-CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8335-99899978923889999999999999999876
No 59
>PRK08466 consensus
Probab=100.00 E-value=0 Score=738.14 Aligned_cols=385 Identities=26% Similarity=0.491 Sum_probs=343.6
Q ss_pred CCCEECCCCCC------CC-EEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCH
Q ss_conf 43145155888------87-48985010379967997646410226743578789999999999997314506-875781
Q gi|254780432|r 3 KNDFLFNTYDQ------SD-IRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQST 74 (392)
Q Consensus 3 ~~~~~~~~~~~------~p-~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~~ 74 (392)
+++|+||+|.+ .| ++|+||+|+||||.|||+|||+.+|+|+++|||+||+|.+|+++|++++.++. ..+.++
T Consensus 10 d~~~~~h~~~~~~~~~~~p~i~i~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~~~~~~~~~~~ 89 (430)
T PRK08466 10 DLEHIWHPCTQMKDHETLPLIPIKKAKGVYLYDFDGNAYIDCISSWWVNLFGHCNPYINEAIKKQIDELEHVILAGFTHE 89 (430)
T ss_pred HHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 88341788888521256898689957348899899899999243779761147979999999999965777345775877
Q ss_pred HHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999986520101--3331235655540356777665432001347860023435465654321234553211347999
Q gi|254780432|r 75 QQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFG 152 (392)
Q Consensus 75 ~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~ 152 (392)
...+|+++|++..| +++|+|+||||||||+|||+||+|+...+. +|++||+|++||||+|++++++++...++++|.
T Consensus 90 ~~~~lae~L~~~~p~~l~~v~f~~sGseA~E~AiKlAr~y~~~~g~-~k~~iis~~~~yHG~T~ga~s~~~~~~~~~~~~ 168 (430)
T PRK08466 90 PIIKLSERLCELTPRGLNKCFYADNGSSAIEVALKMSFHYHKNKGK-KKSLFLSLSNSYHGETLGALSVGDVALYKDTYK 168 (430)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCC
T ss_conf 9999999999857887787998377199999999999999752268-975899964752688521102578400246778
Q ss_pred CCCCCCCCCCC--------HHHHHHHHHC---CCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCC
Q ss_conf 86433322210--------0268875410---12332222333-222211246210123221102234572131011003
Q gi|254780432|r 153 PKIEGFDQAKF--------CDLQSLKNQI---SNDTAAILIEP-IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQT 220 (392)
Q Consensus 153 p~~~~~~~~~~--------~d~~~l~~~~---~~~iAavi~Ep-v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t 220 (392)
|......+.|+ ++++.+++.+ .++|||||+|| +||+||+++||++||++||++|++||++||+|||||
T Consensus 169 p~~~~~~~~p~p~~~~~~~~~~~~l~~~l~~~~~~iAAvI~EPiiqg~gg~~~~~~~yl~~lr~lc~~~gillI~DEV~t 248 (430)
T PRK08466 169 PLLLECLQTPVPKDDEAYQEALEALKRILEKHAEEICAFILEPLVQCAGNMHMYSAEYLKEAIKLCHKYNIHIIFDEIAV 248 (430)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEC
T ss_conf 87768611589997166788899999999858997779999787667799768988999999999853596688731011
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCC-------CCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 4444555310111245453021034444443-4432100011122222-------3322345321111001233455432
Q gi|254780432|r 221 GYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMN-------QGSHGSTYGGNVLAMVLGEKVLNII 292 (392)
Q Consensus 221 G~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~-------~~~~~~T~~gnpl~~aaa~a~L~~l 292 (392)
||||||+||++|++||+|||+|+||+|+||| |+||++++++|++.+. ...|++||+|||++||||+++|+++
T Consensus 249 GfGRtG~~fa~~~~gv~PDiv~~gK~l~gG~~Pisav~~~~ei~~~~~~~~~~~~~~~h~~T~~Gnpla~aaala~L~~l 328 (430)
T PRK08466 249 GFGRTGTMFALEQCGISPDFLCLSKGITGGYLPLSVVLTSDEIYNAFYAPYEENKAFLHSHSYTGNALACAAANATLDIF 328 (430)
T ss_pred CCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 78766762055416999988986841017887749999858999875056555666012657888979999999999999
Q ss_pred HCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH------HHHHHHHHHCCEEEEECCCCEEEEC
Q ss_conf 0122210112100002688999988679707550464009998724998------9999999968989962689889955
Q gi|254780432|r 293 QSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP------ALLAAKFRDECLLTAPSSDNVVRIL 366 (392)
Q Consensus 293 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~------~~~~~~l~~~Gll~~~~~~~~irl~ 366 (392)
+++++++|++++|++|+++|+++. ++| .|.+|||.|+|+++|+...+ ..+...++++|+++.+.+ |+|+|.
T Consensus 329 ~~~~l~~~~~~~g~~l~~~L~~l~-~~~-~v~~vRg~Gl~~~iel~~~~~~~~~~~~i~~~~l~~Gll~~~~g-~~l~~~ 405 (430)
T PRK08466 329 EDENVIEKNQILSEFIQKELSRLE-KLD-FVGNLRQCGMVFAFELLGTDTKERVGLFVFQKALKKGLLLRPLG-NTIYFM 405 (430)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHH-CCC-CEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCC-CEEEEE
T ss_conf 968888999999999999999862-499-75788412538999984588503799999999997893891149-999997
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8986889999999999999999852
Q gi|254780432|r 367 PPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 367 Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
|||+||++|||+++++|+++|++|.
T Consensus 406 PpL~it~eeid~~~~~l~~al~elk 430 (430)
T PRK08466 406 PPYIITKEEIKKVIEVLEEIIKELK 430 (430)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 9858899999999999999999739
No 60
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=741.06 Aligned_cols=377 Identities=28% Similarity=0.515 Sum_probs=336.3
Q ss_pred EECCCC-CCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHH
Q ss_conf 451558-88874898501037996799764641022674357878999999999999731450-6875781899999865
Q gi|254780432|r 6 FLFNTY-DQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHV-SNLYQSTQQEIFANHL 83 (392)
Q Consensus 6 ~~~~~~-~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~-~~~~~~~~~~~la~~L 83 (392)
.-.+.| .++|++|+||+|+|+||.|||+||||.||+|++++||+||+|++|+++|+++..+. +..+.++...+++++|
T Consensus 36 ~~~~~~~~~~P~~i~ra~G~~l~D~dG~~yLD~~sg~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L 115 (464)
T PRK06938 36 SNARSYPRRIPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDL 115 (464)
T ss_pred HHHHCCCCCCCCCEEEEECCEEEECCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHH
T ss_conf 12422588899627983648899798899999164088656707959999999999860898126785868999999999
Q ss_pred HHHCCC-----CCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 201013-----33123-565554035677766543200134786002343546565432123455321134799986433
Q gi|254780432|r 84 IHSTFA-----DRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEG 157 (392)
Q Consensus 84 ~~~~~~-----~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~ 157 (392)
+...+. .+++| .+|||||||+|||+||++ |+|++||+|+++|||+|.+++|+|++..++++++|..++
T Consensus 116 ~~~~p~~~~~~~~v~f~~~SGSEAvE~AiKlAR~~------tgr~~Iis~~~~YHG~T~gals~tg~~~~~~~~~~~~~~ 189 (464)
T PRK06938 116 FGSLPEAFAKEAKIQFCGPTGTDAVEAALKLVKTA------TGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPG 189 (464)
T ss_pred HHHCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHC------CCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99620555304408984798089999999998646------798859998347889706556541787555567888999
Q ss_pred CCCCCCH-----------------HHHHHHHHCC------CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEE
Q ss_conf 3222100-----------------2688754101------2332222333222211246210123221102234572131
Q gi|254780432|r 158 FDQAKFC-----------------DLQSLKNQIS------NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLI 214 (392)
Q Consensus 158 ~~~~~~~-----------------d~~~l~~~~~------~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI 214 (392)
+.++|++ +++.+++.+. +++||||+|||||+||+++||++||++||++|++||++||
T Consensus 190 ~~~~p~p~~~r~p~~~~~~~~~~~~~~~le~~i~~~~~g~~~iAAvi~EpIqg~gGvi~~p~~yl~~lr~lc~~~giLlI 269 (464)
T PRK06938 190 VQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVQLPAAVILEVVQGEGGVIPADDEWLRGLRRITEEAGIPLI 269 (464)
T ss_pred CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 67816886446766776156788889999999740540688248999888568779864998999999999866791598
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 01100344445553101112454530210344444434432100011122222332234532111100123345543201
Q gi|254780432|r 215 FDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS 294 (392)
Q Consensus 215 ~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~ 294 (392)
+|||||||||||+||++|++||+|||+|+||+||||+|+|+|++++++ +.+.++.|++||+|||++||||+++|+++++
T Consensus 270 ~DEVqtGfGRTG~~fa~e~~gv~PDiit~gKglgGg~Plsavi~~~~i-~~~~~g~h~~T~~gnpla~AaalavL~iie~ 348 (464)
T PRK06938 270 VDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKE 348 (464)
T ss_pred CCCCCCCCCCCCCCHHHHHCCCCCCEEEECHHCCCCCCEEEEEECHHH-HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 642012677436840643236888879863000487734999982776-5047887487289998999999999999986
Q ss_pred CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC----------------HHHHHHHHHHCCEEEEEC
Q ss_conf 2221011210000268899998867970755046400999872499----------------899999999689899626
Q gi|254780432|r 295 DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS----------------PALLAAKFRDECLLTAPS 358 (392)
Q Consensus 295 ~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~----------------~~~~~~~l~~~Gll~~~~ 358 (392)
+++++|++++|++|+++|+++..+|| .|.+|||+|||++||++.+ ...+.+.++++||++.+.
T Consensus 349 e~l~~~a~~~G~~l~~~L~~l~~~~p-~V~dVRG~GLm~giElv~~~~~~d~~~~~p~~~~~~~~v~~~~l~~Gll~~~~ 427 (464)
T PRK06938 349 HRLAEHAAAMGERLLEHLRQLQRDYP-QLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASRIQRECLRRGLILELG 427 (464)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 44999999999999999999985399-87976416069999984166664433356555899999999999789289646
Q ss_pred C--CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8--9889955898688999999999999999985
Q gi|254780432|r 359 S--DNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 359 ~--~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+ +|+|||.|||+||++|||+++++|+++|.++
T Consensus 428 g~~g~virl~PPL~it~eeid~~~~~l~~al~~a 461 (464)
T PRK06938 428 GRHGSVVRFLPPLIITAEQIDEVAEIFAEAVYAA 461 (464)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8899989997991288999999999999999998
No 61
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=0 Score=739.62 Aligned_cols=383 Identities=27% Similarity=0.413 Sum_probs=339.2
Q ss_pred CCCEECCCCCC---CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCHHHHH
Q ss_conf 43145155888---8748985010379967997646410226743578789999999999997314506-8757818999
Q gi|254780432|r 3 KNDFLFNTYDQ---SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQSTQQEI 78 (392)
Q Consensus 3 ~~~~~~~~~~~---~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~~~~~~ 78 (392)
+++|+||+|.+ .|.+|+||+|+||||.|||+||||+||+|++++||+||+|++|+++|++++.|+. ..+.++...+
T Consensus 10 d~~~~~hp~~~~~~~p~vi~r~~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~ 89 (423)
T PRK05630 10 DHRNIWHPYAAPGVRNRLVTKTDGVFLTLEDGSTVIDAMSSWWSAIHGHGHPRLKAAAQKQIDTMSHVMFGGLTHEPAIK 89 (423)
T ss_pred HHHHCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 88543789999999984499530488996998999984436887615369999999999998657673467757689999
Q ss_pred HHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 9986520101--33312356555403567776654320013478600234354656543212345532113479-99864
Q gi|254780432|r 79 FANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEG-FGPKI 155 (392)
Q Consensus 79 la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~-~~p~~ 155 (392)
|+++|++..| +++|+|+||||||||+|||+||+|+..+|.++|++||+|+++|||+|++++|+++....... +.+..
T Consensus 90 lae~L~~~~p~~~~~v~f~~SGsEAvE~AiKlAr~~~~~~g~~~r~~Ii~~~~~yHG~T~ga~s~t~~~~~~~~~~~~~~ 169 (423)
T PRK05630 90 LTHKLLNLTGNPFDHVFYSDSGSVSVEVAIKMALQASKGQGHPERTKLLTWRSGYHGDTFTAMSVCDPENGMHSLWKGTL 169 (423)
T ss_pred HHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHEECCCCCCCCCCCCCCC
T ss_conf 99999875447768899628728999999999999987438987634765558507766645411067666555557889
Q ss_pred CCCCC--------CCCHH----HHHHHHHCCCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCC
Q ss_conf 33322--------21002----68875410123322223332-2221124621012322110223457213101100344
Q gi|254780432|r 156 EGFDQ--------AKFCD----LQSLKNQISNDTAAILIEPI-QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGY 222 (392)
Q Consensus 156 ~~~~~--------~~~~d----~~~l~~~~~~~iAavi~Epv-~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~ 222 (392)
+.... ....+ ++.++..++++|||||+||| ||+||+++||++||++||++|++||++||+|||||||
T Consensus 170 ~~~~~~p~p~~~~~~~~~~~~~l~~l~~~~~~~iAAii~EPi~qg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~TGf 249 (423)
T PRK05630 170 PEQIFAPAPPVRGSSPQAISEYLDSMELLIDETVSAIIIEPIVQGAGGMRFHDVALIEGVATLCKKHDRFLIVDEIATGF 249 (423)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEECC
T ss_conf 87645689986788878999999999874388725999974677779956798799999998733068058636432058
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 44555310111245453021034444443-443210001112222233------22345321111001233455432012
Q gi|254780432|r 223 GRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQG------SHGSTYGGNVLAMVLGEKVLNIIQSD 295 (392)
Q Consensus 223 GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~------~~~~T~~gnpl~~aaa~a~L~~l~~~ 295 (392)
||||+||++|++||+|||+|+||+|+||| |+|||+++++|++.+... .|++||+|||++||||+++|++|+++
T Consensus 250 GRtG~~fa~e~~gV~PDivt~gK~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~hg~T~~GnPl~~Aaa~a~l~~i~~~ 329 (423)
T PRK05630 250 GRTGELFATLSNGVQPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVSHASLEIIETG 329 (423)
T ss_pred CCCCCCHHHHHCCCCCCEEEECCHHHCCCCCEEEEEECHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 74565202765699776898762432886762799763899975427678876505479997889999999999999847
Q ss_pred CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCH
Q ss_conf 221011210000268899998867970755046400999872499--899999999689899626898899558986889
Q gi|254780432|r 296 GFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTAPSSDNVVRILPPLTITA 373 (392)
Q Consensus 296 ~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~ 373 (392)
++++|++++|++|+++|++|+ ++| .|.+|||+|+|+++|+..+ .....+.++++|+++.+.+ |+||++|||+||+
T Consensus 330 ~l~~~~~~~g~~l~~~L~~L~-~~p-~V~dVRG~Glm~~vel~~~~~~~~~~~~~~~~Gl~~~~~g-~~l~i~PPL~it~ 406 (423)
T PRK05630 330 MWQKQVKRIEAELIAGLSPLR-HLP-GVADVRVLGAIGVIEMEQNVNVEEATQAALDHGVWIRPFG-RLLYVMPPYITTS 406 (423)
T ss_pred CHHHHHHHHHHHHHHHHHHHC-CCC-CEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCCEEEECC-CEEEEECCCCCCH
T ss_conf 899999999999999999870-699-6787730554999995686569999999996994798539-9999938936899
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780432|r 374 EEIHEGLERIERTAI 388 (392)
Q Consensus 374 ~eid~~i~~l~~al~ 388 (392)
+||++++++|+++|+
T Consensus 407 eei~~~~~~l~~alk 421 (423)
T PRK05630 407 EQCAQICTALHAAVK 421 (423)
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999999999977
No 62
>PRK09792 PLP-dependent GABA aminotransferase; Provisional
Probab=100.00 E-value=0 Score=738.37 Aligned_cols=376 Identities=31% Similarity=0.514 Sum_probs=340.5
Q ss_pred ECCCCCC-CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCHHHHHHHHHHH
Q ss_conf 5155888-87489850103799679976464102267435787899999999999973145068-757818999998652
Q gi|254780432|r 7 LFNTYDQ-SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQSTQQEIFANHLI 84 (392)
Q Consensus 7 ~~~~~~~-~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~~~~~la~~L~ 84 (392)
..+.++. .|++++||+|+||||.|||+||||+||+|++++||+||+|.+|+++|++++.++.. .+.++...+|+++|.
T Consensus 14 ~~~~~~~~~~~~~e~a~G~~l~D~dG~~yLD~~sg~~~~~lGh~~p~v~~Ai~~Q~~~~~~~~~~~~~~~~~~~Lae~l~ 93 (421)
T PRK09792 14 TPRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKIN 93 (421)
T ss_pred CCCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 77765899987999770498996999999892634885100689899999999999744675555446569999999999
Q ss_pred HHCC---CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 0101---33312356555403567776654320013478600234354656543212345532-1134799986433322
Q gi|254780432|r 85 HSTF---ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK-LQYLEGFGPKIEGFDQ 160 (392)
Q Consensus 85 ~~~~---~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~-~~~~~~~~p~~~~~~~ 160 (392)
...| .++++|++|||||||+|||+||+| |||++||+|+++|||+|.+++|+|++ ..++.+|+|.+.++.+
T Consensus 94 ~~~p~~~~~~v~f~~SGsEAvE~AiKlAr~~------tgr~~ii~~~~sYHG~T~ga~s~tg~~~~~~~~~~p~~~~~~~ 167 (421)
T PRK09792 94 ALAPVSGQAKTAFFTTGAEAVENAVKIARAH------TGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYH 167 (421)
T ss_pred HHCCCCCCCEEEEECCCHHHHHHHHHHHHHH------CCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEE
T ss_conf 8477678755998578357999999998875------2998599981785885230354328976433567889997378
Q ss_pred CCCH----------HHHHHHHHC-----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 2100----------268875410-----1233222233322221124621012322110223457213101100344445
Q gi|254780432|r 161 AKFC----------DLQSLKNQI-----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRT 225 (392)
Q Consensus 161 ~~~~----------d~~~l~~~~-----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRt 225 (392)
+|++ +++.+++.+ +++|||||+|||||++|+++||++||++||++|++||++||+||||||||||
T Consensus 168 ~p~p~~~~~~~~~~~~d~~~~~~~~~~~~~~iAAvi~EPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~tGfGRt 247 (421)
T PRK09792 168 VPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFART 247 (421)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCEECCCCC
T ss_conf 07884224666233699999997644566745899965645778823089899999999998739679720221068636
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHC
Q ss_conf 55310111245453021034444443443210001112222233223453211110012334554320122210112100
Q gi|254780432|r 226 GKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIA 305 (392)
Q Consensus 226 G~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g 305 (392)
|+||++|++|++|||+|+||+|+||+|+||+++++++++.+.++.|++||+|||++||||+++|++++++++++|++++|
T Consensus 248 G~~fa~e~~gv~PDii~~gK~l~gG~P~~av~~~~~v~~~~~~~~~~~Tf~Gnpl~~aaa~a~L~ii~~e~l~~~v~~~g 327 (421)
T PRK09792 248 GKLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLG 327 (421)
T ss_pred CCCHHHHHHCCCCCEEEECCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 65226575099986876432234887718999728886467877647879989899999999999998658999999999
Q ss_pred CHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC---------HHHHHHHHHHCCEEEEECC--CCEEEECCCCCCCHH
Q ss_conf 00268899998867970755046400999872499---------8999999996898996268--988995589868899
Q gi|254780432|r 306 KILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS---------PALLAAKFRDECLLTAPSS--DNVVRILPPLTITAE 374 (392)
Q Consensus 306 ~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~---------~~~~~~~l~~~Gll~~~~~--~~~irl~Ppl~it~~ 374 (392)
++|+++|+++.++|| .|.+|||+|||+++|+..+ ...+.+.++++|+++.+.+ +|+|||.|||+||++
T Consensus 328 ~~l~~~L~~~~~~~p-~v~~VRG~Glm~gvel~d~~~~~p~~~~~~~i~~~~~~~Gll~~~~g~~g~~i~~~PPL~it~~ 406 (421)
T PRK09792 328 QRLKNTLIDAKESVP-AIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDA 406 (421)
T ss_pred HHHHHHHHHHHHCCC-CEEEEEECEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCEECCHH
T ss_conf 999999999975699-8898541418999997578778832999999999999779789944899898999799238899
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999998
Q gi|254780432|r 375 EIHEGLERIERTAIK 389 (392)
Q Consensus 375 eid~~i~~l~~al~~ 389 (392)
|||+++++|+++|.+
T Consensus 407 eid~~~~il~~aL~e 421 (421)
T PRK09792 407 QFDAAMKILQDALSD 421 (421)
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 999999999999639
No 63
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=0 Score=737.61 Aligned_cols=385 Identities=26% Similarity=0.395 Sum_probs=337.7
Q ss_pred CCEECCCCC-------CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC--CCH
Q ss_conf 314515588-------88748985010379967997646410226743578789999999999997314506875--781
Q gi|254780432|r 4 NDFLFNTYD-------QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLY--QST 74 (392)
Q Consensus 4 ~~~~~~~~~-------~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~--~~~ 74 (392)
+.|+||.|. ..|++|+||+|+||||.|||+||||.||+|++||||+||+|++|+++|++++.+.+..+ .++
T Consensus 19 ~~h~~h~~~~~~~~~~~~P~vi~ra~G~~v~D~dG~~ylD~~sg~~~~~lGh~~p~I~~Ai~~q~~~l~~~~~~~~~~~~ 98 (460)
T PRK12403 19 AAHHIHAFLDQKALNAEGPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHP 98 (460)
T ss_pred HHHCCCCCCCCCCCCCCCCEEEEEEEECEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf 86467887784322578995899622288997998999995636886435579599999999999755871565456788
Q ss_pred HHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999986520101--3331235655540356777665432001347860023435465654321234553211347999
Q gi|254780432|r 75 QQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFG 152 (392)
Q Consensus 75 ~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~ 152 (392)
...+|+++|++..| +++++|+||||||||+|||+||+|+...|+++|.+||++.+||||+|++++++++.+.. ..++
T Consensus 99 ~~~elAe~L~~~~P~~~~~v~f~~sGSEA~E~AiklAr~y~~~~g~~~~~~ii~~~~~yHG~T~ga~s~sg~~~~-~~~~ 177 (460)
T PRK12403 99 AVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFM-HEMG 177 (460)
T ss_pred HHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCC-CCCC
T ss_conf 999999999975787658698448718999999999999998608997469999668877407988724674124-4567
Q ss_pred CCCCCCCCCCCHH-----------------HHHHHHH----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 8643332221002-----------------6887541----012332222333222211246210123221102234572
Q gi|254780432|r 153 PKIEGFDQAKFCD-----------------LQSLKNQ----ISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDA 211 (392)
Q Consensus 153 p~~~~~~~~~~~d-----------------~~~l~~~----~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~ 211 (392)
+..+++.+++++. ...+++. .+++|||||+|||||++|+++||++||++||++|++||+
T Consensus 178 ~~~p~~~~~~~P~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAavi~EPi~g~gG~i~pp~~yl~~lr~lc~~~gi 257 (460)
T PRK12403 178 GLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDV 257 (460)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHCCCC
T ss_conf 88998411477544556677887788899999999999962898669999545225586572756776999999732596
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCHHHHH
Q ss_conf 1310110034444555310111245453021034444443-44321000111222223----322345321111001233
Q gi|254780432|r 212 LLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQ----GSHGSTYGGNVLAMVLGE 286 (392)
Q Consensus 212 llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~----~~~~~T~~gnpl~~aaa~ 286 (392)
+||+|||||||||||+||++|++||+|||+|+||+|+||| |+|||+++++|++.+.+ ..|++||+|||++||||+
T Consensus 258 llI~DEV~tGfGRtG~~fa~e~~gV~PDivt~gK~l~gG~~Plsav~~~~~i~~~~~~~~~~~~hg~T~~Gnpla~Aaal 337 (460)
T PRK12403 258 LLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAI 337 (460)
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 69986251277634377300217958771222124457877617997358999875037865014778899989999999
Q ss_pred HHHHHHHCCCCCCHHHH-HCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH---------H----HHHHHHHHCC
Q ss_conf 45543201222101121-00002688999988679707550464009998724998---------9----9999999689
Q gi|254780432|r 287 KVLNIIQSDGFLENVIN-IAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP---------A----LLAAKFRDEC 352 (392)
Q Consensus 287 a~L~~l~~~~l~~~~~~-~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~---------~----~~~~~l~~~G 352 (392)
++|++++++++++|+++ +|++|+++|+++.++|| +|.+|||+|||+++|++.++ . .+...++++|
T Consensus 338 a~l~~i~~e~l~~~~~~~~g~~l~~~L~~l~~~~p-~vgdVRG~GLm~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~G 416 (460)
T PRK12403 338 ANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHP-LVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEG 416 (460)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99999986669999999999999999999872599-58863014549999942576421136525789999999999799
Q ss_pred EEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 899626898899558986889999999999999999852
Q gi|254780432|r 353 LLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 353 ll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+++++..+ .++|.|||+||++|||+++++|+++|.+++
T Consensus 417 lli~~~~~-~~~l~PPLiit~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 417 VIIRSTLG-RMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred EEEEECCC-EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89973698-099989943889999999999999999999
No 64
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=0 Score=736.17 Aligned_cols=386 Identities=29% Similarity=0.445 Sum_probs=338.2
Q ss_pred CCCEECCCCCC----CCE-EEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCHHH
Q ss_conf 43145155888----874-89850103799679976464102267435787899999999999973145068-7578189
Q gi|254780432|r 3 KNDFLFNTYDQ----SDI-RFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQSTQQ 76 (392)
Q Consensus 3 ~~~~~~~~~~~----~p~-~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~~~ 76 (392)
|++|+||.|.+ .|+ .|+||+|+||||.|||+||||.||+|++++||+||+|.+|+++|++++.|+.. .+.++..
T Consensus 9 d~~~~~hp~t~~~~~~~~~~I~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~ 88 (428)
T PRK07986 9 DQRHIWHPYTSMTSPLPVYPVASAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHQPA 88 (428)
T ss_pred HHHHCCCCCCCCCCCCCCCCEEEEECCEEEECCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 98517899766677889967696332889979999999866228750047996999999999997578703688677899
Q ss_pred HHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 999986520101--3331235655540356777665432001347860023435465654321234553211-3479998
Q gi|254780432|r 77 EIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ-YLEGFGP 153 (392)
Q Consensus 77 ~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~-~~~~~~p 153 (392)
.+|+++|++..| +++|+|+||||||||+|||+||+|+..+| ++|++||+|++||||+|++++|+|+... .+..+.+
T Consensus 89 ~~lae~L~~~~p~~l~~vff~~sGSEAvE~AlKlAr~y~~~~g-~~r~~ii~~~~syHG~T~gals~t~~~~~~~~~~~~ 167 (428)
T PRK07986 89 IELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKG-EPRQRFLTFRHGYHGDTFGAMSVCDPDNSMHSLYKG 167 (428)
T ss_pred HHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCCHHHEEECCCCCCCCCCCCC
T ss_conf 9999999984888758699648628999999999999999709-986449998387389971225731686444345577
Q ss_pred CCCCCC-----------CCCCHHHHHHHHHC---CCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 643332-----------22100268875410---123322223332-222112462101232211022345721310110
Q gi|254780432|r 154 KIEGFD-----------QAKFCDLQSLKNQI---SNDTAAILIEPI-QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV 218 (392)
Q Consensus 154 ~~~~~~-----------~~~~~d~~~l~~~~---~~~iAavi~Epv-~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV 218 (392)
..+... ....+|+..+++.+ .++|||||+||| ||+||+++||++||++||++|++||++||+|||
T Consensus 168 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAviiEPi~qg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV 247 (428)
T PRK07986 168 YLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRIRKLCDREGILLIADEI 247 (428)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEECCC
T ss_conf 79985013788766565557123999999997478870189983244676983538999999999999863963661100
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 034444555310111245453021034444443-443210001112222233-----22345321111001233455432
Q gi|254780432|r 219 QTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQG-----SHGSTYGGNVLAMVLGEKVLNII 292 (392)
Q Consensus 219 ~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~~-----~~~~T~~gnpl~~aaa~a~L~~l 292 (392)
||||||||+||++|++||+|||+|+||+|+||| |+|++++++++++.+..+ .|++||+|||++||||+++|+++
T Consensus 248 ~tGfGRtG~~fa~e~~gv~PDiit~gKgl~gG~~Pl~av~~~~~i~~~~~~~~~~~f~hg~Tf~Gnpla~Aaa~a~L~~i 327 (428)
T PRK07986 248 ATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLL 327 (428)
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 02788667865000047899889975201388775389998699996305687654101778999989999999999999
Q ss_pred HCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEEECCCCEEEECCCCC
Q ss_conf 012221011210000268899998867970755046400999872499--899999999689899626898899558986
Q gi|254780432|r 293 QSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTAPSSDNVVRILPPLT 370 (392)
Q Consensus 293 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~ 370 (392)
+++++++|++++|++|+++|++|+ ++ ++|.+|||+|+|+++|+..+ ...+.+.++++|+++.+.+ |+|+|+|||+
T Consensus 328 ~~~~l~~~~~~~g~~l~~~L~~L~-~~-~~V~dVRg~Gl~~~ve~~~p~~~~~~~~~~~~~Gll~~~~g-~~i~l~PPLi 404 (428)
T PRK07986 328 ESGDWQQQVAAIESQLREELAPLR-DA-EMVADVRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPFG-KLIYLMPPYI 404 (428)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHH-CC-CCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCCEEEECC-CEEEEECCCC
T ss_conf 865699999999999999999875-59-95787742672899980794539999999997994897459-9999989914
Q ss_pred CCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8899999999999999998529
Q gi|254780432|r 371 ITAEEIHEGLERIERTAIKLSH 392 (392)
Q Consensus 371 it~~eid~~i~~l~~al~~L~~ 392 (392)
||++|||+++++|+++|.+..+
T Consensus 405 it~~ei~~~~~~l~~al~e~t~ 426 (428)
T PRK07986 405 ILPEQLQRLTAAVNRAVQDETF 426 (428)
T ss_pred CCHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999999975522
No 65
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=0 Score=731.32 Aligned_cols=362 Identities=36% Similarity=0.622 Sum_probs=341.8
Q ss_pred CCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 58888748985010379967997646410226743578789999999999997314506875781899999865201013
Q gi|254780432|r 10 TYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFA 89 (392)
Q Consensus 10 ~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~ 89 (392)
+|++.|+.|+||+|+|+||.|||+||||+||+|+++|||+||+|++|+++|++++.+.++.+.++...+++++|.+..++
T Consensus 2 ~~y~~~i~ivrg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~ql~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 81 (364)
T PRK04013 2 SLYRKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNY 81 (364)
T ss_pred CCCCCCCCEEEEECCEEEECCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 98888876898478999969979999957527765654898899999999997557657763658999999997525797
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 33123565554035677766543200134786002343546565432123455321134799986433322210026887
Q gi|254780432|r 90 DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSL 169 (392)
Q Consensus 90 ~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l 169 (392)
++|+|++|||||||+|||+||+| |+|++||+++++|||+|.+++++++++.++++|+|..+++.++||+|++++
T Consensus 82 ~~v~f~~SGseAve~AiklAr~~------tgr~~ii~~~~~yHG~t~g~ls~~~~~~~~~~~~~~~~~~~~~p~~d~~~~ 155 (364)
T PRK04013 82 EYVYMGNSGTEAVEAALKFARLY------TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAA 155 (364)
T ss_pred CEEEECCCHHHHHHHHHHHHHHC------CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHH
T ss_conf 88996388469999999998762------799989996488677866633445773334577899887055576439999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 54101233222233322221124621012322110223457213101100344445553101112454530210344444
Q gi|254780432|r 170 KNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGG 249 (392)
Q Consensus 170 ~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~g 249 (392)
++.+.+++||||+|||||++|+++||++||+++|++|++||++||+||||||| |||+||++|+||++|||+|+||+|||
T Consensus 156 ~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tGf-RtG~~~a~e~~gv~PDiv~~gKglgg 234 (364)
T PRK04013 156 KEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGIGN 234 (364)
T ss_pred HHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC-CCCCCCHHHCCCCCCCEEEECCCCCC
T ss_conf 98726673599997677788862487799999999999769976710230360-43430231158999989996340008
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 43443210001112222233223453211110012334554320122210112100002688999988679707550464
Q gi|254780432|r 250 GFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQ 329 (392)
Q Consensus 250 G~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~ 329 (392)
|+|+|+|+++.++ .++.|++||+|||++|+||+++|++++++++++|+++. +.++ ++ ..+.+|||+
T Consensus 235 G~Pl~av~~~~~i----~~~~h~~T~~Gnp~~~aaa~a~L~ii~~e~l~~~~~~~-------~~~~--~~-~~v~~vRG~ 300 (364)
T PRK04013 235 GVPVSLTLTNFDV----ERGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------FIEI--KG-ERVVTTRGR 300 (364)
T ss_pred CCCCEEEEECCCC----CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHH-------HHHH--CC-CCEEEEECC
T ss_conf 8651899964101----13765675588989999999999999866399999999-------9985--65-700898615
Q ss_pred EEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 009998724998999999996898996268988995589868899999999999999998529
Q gi|254780432|r 330 GLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKLSH 392 (392)
Q Consensus 330 Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~~ 392 (392)
|||+++|+..+...+.+.++++|+++.+.++++|||.|||+||++|||+++++|++++.+|..
T Consensus 301 GL~~gie~~~p~~~~~~~~~~~G~l~~~~g~~virl~PPL~it~~eid~~~~~l~~al~ev~~ 363 (364)
T PRK04013 301 GLMIGIVLKKPVGKYVEELQNRGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVINDILG 363 (364)
T ss_pred CEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEEECCEECCHHHHHHHHHHHHHHHHHHHC
T ss_conf 379999977848999999995996996379998999888137899999999999999999857
No 66
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=0 Score=732.67 Aligned_cols=370 Identities=35% Similarity=0.589 Sum_probs=342.6
Q ss_pred CEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCC
Q ss_conf 74898501037996799764641022674357878999999999999731450687578189999986520101--3331
Q gi|254780432|r 15 DIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRV 92 (392)
Q Consensus 15 p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v 92 (392)
++.|..+...|+||.|||+||||.||+|++++||+||+|++|+++|+++..+.+..+.++.+.+|+++|++..| .+++
T Consensus 58 ~~~~~~~~~~~L~D~dG~~YLD~~sG~~~~~lGH~hp~I~~Ai~~Ql~~~~~~s~~~~~~~~~~lae~L~~~~P~~~~~v 137 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYS 137 (442)
T ss_pred EEEEECCCCCEEEECCCCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCCCEE
T ss_conf 58996388167997989998884563885100679899999999997236830144456899999999997478887879
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 23565554035677766543200134786002343546565432123455321134799986433322210026887541
Q gi|254780432|r 93 FFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQ 172 (392)
Q Consensus 93 ~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~ 172 (392)
+|+||||||||+|||+||+|+.. +||.+||+++++|||+|++++|+++++.++++|.|..+++.+++++|++++++.
T Consensus 138 ff~nSGSEAvE~AiKlAr~y~~~---~Gk~~ii~~~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~ 214 (442)
T TIGR03372 138 FFCNSGTESVEAALKLAKAYQSP---RGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKA 214 (442)
T ss_pred EECCCCHHHHHHHHHHHHHHHHC---CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHH
T ss_conf 86388679999999999997326---898189999167787475703024784335788789998255578999999999
Q ss_pred C------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 0------1233222233322221124621012322110223457213101100344445553101112454530210344
Q gi|254780432|r 173 I------SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKG 246 (392)
Q Consensus 173 ~------~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~ 246 (392)
+ .++|||||+|||||++|+++||++||+++|++|++||++||+|||||||||||+||++|++||+|||+|+||+
T Consensus 215 ~~~~~~~~~~iAaviiEPiqg~gG~~~p~~~yl~~lr~lc~~~gvllI~DEVqtGfGRTG~~fa~e~~gV~PDIvt~gKg 294 (442)
T TIGR03372 215 LNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKA 294 (442)
T ss_pred HHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHH
T ss_conf 99887559978999984677777874499999999999999849703236212279847783376548999976865454
Q ss_pred CCCC-CCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEE
Q ss_conf 4444-3443210001112222--233223453211110012334554320122210112100002688999988679707
Q gi|254780432|r 247 MGGG-FPIGACLATNEVAACM--NQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMF 323 (392)
Q Consensus 247 l~gG-~P~sav~~~~~i~~~~--~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v 323 (392)
|||| +|+|++++++++++.+ .+..|++||+|||++|+||+++|+++++++++++++++|++|+++|+++.++||++|
T Consensus 295 LggG~~Pi~av~~~~~i~~~~~~~~~~h~sTf~Gnpla~aaalavL~~i~~~~l~~~~~~~G~~l~~~L~~L~~~~p~~V 374 (442)
T TIGR03372 295 LGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLI 374 (442)
T ss_pred HCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 15887762689750999877624897547888989999999999999998656999999999999999999987687816
Q ss_pred EEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEEEC--CCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 55046400999872499--899999999689899626--89889955898688999999999999999
Q gi|254780432|r 324 LEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTAPS--SDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 324 ~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~~~--~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
.+|||+|||+++|++.+ ...+.+.++++|+++.+. +.++|||.|||+||++|||+++++|+++|
T Consensus 375 ~dVRG~GLm~giE~~~~~~~~~~~~~~~~~gvl~~~~~~~~~~iri~PPL~it~eeid~~i~~l~~aL 442 (442)
T TIGR03372 375 IEARGKGLLMAIEFRDNEIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred EEEEECCEEEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 68564538999997881679999999997897998558998989998895089999999999999869
No 67
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase; InterPro: IPR012773 Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (2.6.1.76 from EC) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore (Q9Z3R2 from SWISSPROT) or 1,3-diaminopropane (P44951 from SWISSPROT) biosynthesis. Ectoine is a compatible solute particularly effective in conferring salt tolerance.; GO: 0030170 pyridoxal phosphate binding, 0047307 diaminobutyrate-pyruvate transaminase activity, 0019491 ectoine biosynthetic process.
Probab=100.00 E-value=0 Score=735.83 Aligned_cols=380 Identities=32% Similarity=0.562 Sum_probs=348.8
Q ss_pred CCCEECCCCCC-CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHH--CCCCCCCCCCHHHH--
Q ss_conf 43145155888-87489850103799679976464102267435787899999999999973--14506875781899--
Q gi|254780432|r 3 KNDFLFNTYDQ-SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEK--LWHVSNLYQSTQQE-- 77 (392)
Q Consensus 3 ~~~~~~~~~~~-~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~--~~~~~~~~~~~~~~-- 77 (392)
+-|--+|+|++ +|++|+||+|+||||.|||+||||.||.|+.|.|||||.|++++.+.++. +.|.-++++...+.
T Consensus 5 ~~ES~VRSY~R~FPtvF~~AkG~~L~D~~Gk~YIDFlaGAGaLNYGHN~p~~K~~L~~Yl~~DGI~hsLDM~T~AK~~Fl 84 (413)
T TIGR02407 5 ELESEVRSYCRSFPTVFEKAKGSTLWDEDGKEYIDFLAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFL 84 (413)
T ss_pred CCCCCCCCCCCCCHHHHHHCCCCEEEECCCCEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH
T ss_conf 01212000358860354312265787034873110210156467888898999999999985893362002417899999
Q ss_pred -HHHHHHHHHCCCC-CCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -9998652010133-3123-565554035677766543200134786002343546565432123455321134799986
Q gi|254780432|r 78 -IFANHLIHSTFAD-RVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPK 154 (392)
Q Consensus 78 -~la~~L~~~~~~~-~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~ 154 (392)
.|.+.++++..+| ||.| ..+||.|||+||||||++ |||.-||||+|||||+|+||+|+||+..+|++.+-.
T Consensus 85 ~~F~~~IL~PR~LdYK~qFpGPTGTNaVEsAlKLARKv------tGR~nvvaFTNaFHGmt~GsLsvTGN~~~R~~aG~~ 158 (413)
T TIGR02407 85 ETFQEIILKPRGLDYKVQFPGPTGTNAVESALKLARKV------TGRSNVVAFTNAFHGMTLGSLSVTGNRFKRQGAGVP 158 (413)
T ss_pred HHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCC------CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99998526788789515688878640799999998503------898406885177302348988864334443026744
Q ss_pred CCCCCCCCC--------HHHHHHHHHCCC------CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCC
Q ss_conf 433322210--------026887541012------332222333222211246210123221102234572131011003
Q gi|254780432|r 155 IEGFDQAKF--------CDLQSLKNQISN------DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQT 220 (392)
Q Consensus 155 ~~~~~~~~~--------~d~~~l~~~~~~------~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t 220 (392)
..++...|| +++..+++.+.| .+||||+||||||||+.+++.+||++|++|||+||||||+|+||.
T Consensus 159 ~~~v~~mPYDgY~~~~~D~~~Yfe~~L~D~sSGvd~PAAvILETVQGEGGiNvAs~eWLq~l~~lCr~~DILLIVDDIQa 238 (413)
T TIGR02407 159 LSNVSRMPYDGYLGGEVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASKEWLQRLEKLCRRHDILLIVDDIQA 238 (413)
T ss_pred CCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEC
T ss_conf 77825687655778643228999986178889847672589811037577031235579999999986498687731741
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHCCCCC
Q ss_conf 44445553101112454530210344444-434432100011122222332234532111100123345543-2012221
Q gi|254780432|r 221 GYGRTGKLFAYEWANVKPDIMTIAKGMGG-GFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNI-IQSDGFL 298 (392)
Q Consensus 221 G~GRtG~~f~~e~~gi~PDi~~~gK~l~g-G~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~-l~~~~l~ 298 (392)
|+||||+||+||..||+|||||+||+|+| |+|+|.|+.+.|+ |.|+|++|..||.||.+|..+|.++|+. +.++.+.
T Consensus 239 GCGRTG~FFSFE~AgI~PDiVcLSKSisG~GLPlal~L~kPe~-D~W~PGEHNGTFRGNNlAFVtA~aAL~~yW~Dd~f~ 317 (413)
T TIGR02407 239 GCGRTGTFFSFEPAGIEPDIVCLSKSISGYGLPLALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFE 317 (413)
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHH
T ss_conf 8888789645344677566178502003551268999735456-746788778864665278999999999848962689
Q ss_pred CHHHHHCCHHHHHHHHHHHHCCCEE-EEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEEECC--CCEEEECCCCCCCH
Q ss_conf 0112100002688999988679707-55046400999872499--8999999996898996268--98899558986889
Q gi|254780432|r 299 ENVINIAKILFEGLTAIKNRFPNMF-LEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTAPSS--DNVVRILPPLTITA 373 (392)
Q Consensus 299 ~~~~~~g~~l~~~L~~l~~~~~~~v-~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~~~~--~~~irl~Ppl~it~ 373 (392)
++++++++.+.+.|+++.++||..+ .++||+|||+||++... ...+++.|+++||++-.+| +++|+|.|||||++
T Consensus 318 ~~v~~~s~~~~~~l~~~~~~~~~~~~~~~RGRGlm~Gl~~~~~~~A~~i~~~aF~~GLiiEtsGp~DeV~K~lPpLTI~~ 397 (413)
T TIGR02407 318 KAVQRKSEIIQERLDEIVAEFPELIEKSVRGRGLMQGLECGDGDLAGKIAKAAFENGLIIETSGPEDEVIKLLPPLTIDE 397 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCCH
T ss_conf 99999999999999999987455213110452014200047724689999998646838987188984587038898887
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998
Q gi|254780432|r 374 EEIHEGLERIERTAIK 389 (392)
Q Consensus 374 ~eid~~i~~l~~al~~ 389 (392)
++|++++++|++|+.+
T Consensus 398 ~~L~~GL~IL~~a~~~ 413 (413)
T TIGR02407 398 ETLQQGLDILEQAVEE 413 (413)
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 8899999999999719
No 68
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=0 Score=724.09 Aligned_cols=388 Identities=27% Similarity=0.416 Sum_probs=323.2
Q ss_pred CCEECCCCCCCCEEEEEECCCEEEEC-CCCEEEECHHHHHHHCCCCCCHHHHHHHHH--HHHHCCC---CCCCCCCHHHH
Q ss_conf 31451558888748985010379967-997646410226743578789999999999--9973145---06875781899
Q gi|254780432|r 4 NDFLFNTYDQSDIRFEKGKGAWLFSE-NGIPFLDFASGIAVNSLGHSHPELVAILKS--QSEKLWH---VSNLYQSTQQE 77 (392)
Q Consensus 4 ~~~~~~~~~~~p~~i~~a~G~~i~d~-dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~--q~~~~~~---~~~~~~~~~~~ 77 (392)
++|++.+++|+|+.|+||+|+||||. |||+||||+||+|++++||+||+|+++++. |+..... .+..+.+...+
T Consensus 25 ~~~~~~~~~~~pi~iergeG~yl~D~~DG~~YLD~~sg~~~~~lGH~hP~iv~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (449)
T PRK08297 25 SRSILADGFDLVLDLERSRGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELAQAALNKPSNSDVYTVAMA 104 (449)
T ss_pred HHHHCCCCCCCCEEEEEEECCEEEECCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 87532127997527885153999999999886572252998888479899998799999999998736465236669999
Q ss_pred HHHHHHHHHC---CCCCCCCCCCCCCCHHHHHHHHHHHHHCC----CCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9998652010---13331235655540356777665432001----3478--6002343546565432123455321134
Q gi|254780432|r 78 IFANHLIHST---FADRVFFTNSGAESVECAIKTARRYHYMA----GKTN--KFRIVTFEGAFHGRTLATISAGGKLQYL 148 (392)
Q Consensus 78 ~la~~L~~~~---~~~~v~f~~SGseA~e~Aiklar~~~~~~----g~t~--r~~ii~~~~~yHG~t~~a~s~s~~~~~~ 148 (392)
++++++++.. .+++|+|+||||||||+|||+||+|+... |++. +++||+|+++|||+|.+++|+|+...++
T Consensus 105 ~l~~~l~~~~~~~~l~~vff~nsGSEAvE~AlKlA~~~~~r~~~~~g~~~~~~~kii~~~~sYHG~T~gals~tg~~~~~ 184 (449)
T PRK08297 105 RFVDTFARVLGDPALPHLFFVDGGALAVENALKVAFDWKSRHNEAHGIDPALGTRVLHLRGAFHGRSGYTLSLTNTDPVK 184 (449)
T ss_pred HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCC
T ss_conf 99999998618877775886187689999999999998654300236777677569996365379607778861798533
Q ss_pred CCCCCCCCC----CCC------------CCCHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 799986433----322------------210026887541---0123322223332222112462101232211022345
Q gi|254780432|r 149 EGFGPKIEG----FDQ------------AKFCDLQSLKNQ---ISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDI 209 (392)
Q Consensus 149 ~~~~p~~~~----~~~------------~~~~d~~~l~~~---~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~ 209 (392)
..+.|.... .+. ....+++.+++. .+++|||||+|||||+||+++||++||++||++|++|
T Consensus 185 ~~~~p~~~~~~~~~P~~~~~~~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvIvEPIqG~gG~~~~p~~yl~~lr~lc~~~ 264 (449)
T PRK08297 185 TARFPKFDWPRIDAPYVRPGLDADAVAALEAEALRQARAAFEAHPHDIACFIAEPIQGEGGDRHFRPEFFAAMRALCDEH 264 (449)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 57888888877889987789873016678999999999999858997799999678747799889989999999999971
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 721310110034444555310111245453021034444443443210001112222-2332234532111100123345
Q gi|254780432|r 210 DALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACM-NQGSHGSTYGGNVLAMVLGEKV 288 (392)
Q Consensus 210 g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~-~~~~~~~T~~gnpl~~aaa~a~ 288 (392)
|++||+|||||||||||+||++|++||+|||+|+||+|++|.++++....+.....+ .++.+++||+|||++|+||+++
T Consensus 265 giLLI~DEVqtGfGRTG~~fa~e~~gv~PDiit~~Kgl~~G~~~~~~~~~~~~~~~~~~~~~~~sTf~Gnp~acaaala~ 344 (449)
T PRK08297 265 DALLIFDEVQTGCGLTGTAWAYQQLGVAPDVVAFGKKTQVCGVMAGRRVDEVADNVFAVSSRINSTWGGNLTDMVRARRI 344 (449)
T ss_pred CCEEECCCCEECCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 88454452202787676513313358999889877633455077889999999886416877788889888999999999
Q ss_pred HHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH--HHHHHHHHHCCEEEEECCCCEEEEC
Q ss_conf 54320122210112100002688999988679707550464009998724998--9999999968989962689889955
Q gi|254780432|r 289 LNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP--ALLAAKFRDECLLTAPSSDNVVRIL 366 (392)
Q Consensus 289 L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~--~~~~~~l~~~Gll~~~~~~~~irl~ 366 (392)
|++|+++++++|++++|++|.++|+++.++||+++.+|||+|||+++|+..+. ..+..+++++|+++.+.+.|+|||+
T Consensus 345 L~ii~~e~l~~~~~~~g~~l~~~L~~l~~~~p~ii~dVRG~GLm~giel~~~~~~~~~~~~~~~~Gll~~~~g~~~irl~ 424 (449)
T PRK08297 345 LEVIEAEGLFDRARQQGAYLLARLDELAAEFPAVVLDPRGRGLMCAFSLPTTADRDELIRRLWRERVILLPAGEDSVRFR 424 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCEEEEE
T ss_conf 99984304999999999999999999997689844653115689999828867899999999978958975799979998
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8986889999999999999999852
Q gi|254780432|r 367 PPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 367 Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
|||+||++|||+++++|+++|.+|+
T Consensus 425 PPL~it~~eid~~~~~l~~al~ela 449 (449)
T PRK08297 425 PALTVSRAEIDAAVDAVRRVLRTLA 449 (449)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 9912889999999999999999869
No 69
>KOG1402 consensus
Probab=100.00 E-value=0 Score=713.71 Aligned_cols=386 Identities=36% Similarity=0.633 Sum_probs=369.7
Q ss_pred CCCEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 43145155888874898501037996799764641022674357878999999999999731450687578189999986
Q gi|254780432|r 3 KNDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANH 82 (392)
Q Consensus 3 ~~~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~ 82 (392)
|++|.+|+|+|.|++|+||+|+++||.+|++|+||.++++++|.|||||.|++|+++|.++++.++..|.+....+++|.
T Consensus 30 E~k~~ahnyhpLpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafYnd~~~~f~~~ 109 (427)
T KOG1402 30 ENKYGAHNYHPLPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFYNDVLGEFAEY 109 (427)
T ss_pred HHHCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 44415444776755888167857987775503446655421025778779999999987675133677765567899999
Q ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 520101333123565554035677766543200134--786002343546565432123455321134799986433-32
Q gi|254780432|r 83 LIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGK--TNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEG-FD 159 (392)
Q Consensus 83 L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~--t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~-~~ 159 (392)
+...+++++|.-+|+|.||+|.|+|+||+|.+..+. ..+.+|++..++|||+|++++|+|+++..+++|+|++|+ ++
T Consensus 110 vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~ 189 (427)
T KOG1402 110 VTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVD 189 (427)
T ss_pred HHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCE
T ss_conf 99866854553235540677879999999777631688660048985055567334567715780065456999998630
Q ss_pred CCCCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 221002688754101-2332222333222211246210123221102234572131011003444455531011124545
Q gi|254780432|r 160 QAKFCDLQSLKNQIS-NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKP 238 (392)
Q Consensus 160 ~~~~~d~~~l~~~~~-~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~P 238 (392)
.+||+|+++++..+. .++|+||+|||||++|+++||++||+++|+||++|+++||+||||||+||||+||+++|.+++|
T Consensus 190 ~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~P 269 (427)
T KOG1402 190 KVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRP 269 (427)
T ss_pred EECCCCHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHCEEEEEHHHHHCCCCCCCEEEEEHHHCCC
T ss_conf 32268779999986298756898511346653372892067899999875147888244342523467478865431587
Q ss_pred CEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH
Q ss_conf 302103444444-3443210001112222233223453211110012334554320122210112100002688999988
Q gi|254780432|r 239 DIMTIAKGMGGG-FPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKN 317 (392)
Q Consensus 239 Di~~~gK~l~gG-~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~ 317 (392)
||+.+||+|+|| ||+|+|+.+++||..++|++|+|||+|||++|++|.|+||++++++|.+|++++|..|+.+|+++..
T Consensus 270 DivilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~ 349 (427)
T KOG1402 270 DIVILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQK 349 (427)
T ss_pred CEEEEECCCCCCEEEEEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 76898111368704568998547898616877555656888088899999999999978999999987999999985440
Q ss_pred HCCCEEEEECCCEEEEEEEECCC------HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 67970755046400999872499------899999999689899626898899558986889999999999999999
Q gi|254780432|r 318 RFPNMFLEVRGQGLLIGLKTVFS------PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 318 ~~~~~v~~vRG~Gl~~~ie~~~~------~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
++|.++++|||+|++.+|++... ...++-.+.++|++..++++|+|||+|||+|+++|+++.+++|++++.
T Consensus 350 ~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402 350 KFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred CCCCHHHEEECCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 25644433422533788996155566465888887030256104777887587468843578999889999999742
No 70
>TIGR00700 GABAtrnsam 4-aminobutyrate transaminase; InterPro: IPR004632 Eukaryotic 4-aminobutyrate aminotransferase (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between, in either set, the most similar enzyme with a distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. Escherichia coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=100.00 E-value=0 Score=709.33 Aligned_cols=368 Identities=36% Similarity=0.572 Sum_probs=339.3
Q ss_pred CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHHHHHHHCCC---
Q ss_conf 874898501037996799764641022674357878999999999999731450687-5781899999865201013---
Q gi|254780432|r 14 SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNL-YQSTQQEIFANHLIHSTFA--- 89 (392)
Q Consensus 14 ~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~-~~~~~~~~la~~L~~~~~~--- 89 (392)
.|....||+|..|+|.||||||||.+|++++|.||+||+|++|+++|++.+.|+.+. ..-+...+|||+|+...|.
T Consensus 15 ~~~fa~~aega~l~DvdGnr~IDfa~gIavln~GhshP~vV~AV~~Q~~ef~Ht~f~v~pYe~Yv~lAEkln~iaPgSg~ 94 (427)
T TIGR00700 15 LRVFAAKAEGAILKDVDGNRYIDFAAGIAVLNVGHSHPKVVEAVKRQVEEFTHTAFQVVPYESYVELAEKLNAIAPGSGE 94 (427)
T ss_pred CCEEEEECCCCEEEECCCCEEEHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCCCCC
T ss_conf 51225755884787437752100011023203689873589999999997438853452162589999997157889731
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHH---
Q ss_conf 33123565554035677766543200134786002343546565432123455321-13479998643332221002---
Q gi|254780432|r 90 DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL-QYLEGFGPKIEGFDQAKFCD--- 165 (392)
Q Consensus 90 ~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~p~~~~~~~~~~~d--- 165 (392)
.|..|.|||+||||+|+|+||.| |+|+-||+|+++|||||..+|++|++- .|+.+|+|+.+.+.++||+.
T Consensus 95 kk~~ffnsGAEAVENAVKIAR~y------TgrpgVvaF~~gfHGRTnmTMalT~Kv~PYK~GFGPFapevY~aP~py~y~ 168 (427)
T TIGR00700 95 KKAVFFNSGAEAVENAVKIARKY------TGRPGVVAFDRGFHGRTNMTMALTAKVKPYKIGFGPFAPEVYRAPYPYDYR 168 (427)
T ss_pred HHEEEECCCHHHHHHHHHHHHHH------CCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCC
T ss_conf 00021115437888899999874------589616863687466126788765227873457888674521168872002
Q ss_pred --------------HHHHHH-------HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf --------------688754-------10123322223332222112462101232211022345721310110034444
Q gi|254780432|r 166 --------------LQSLKN-------QISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 166 --------------~~~l~~-------~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
+.++++ .-++++||+|+||||||||.++||++|+..|+++|+||+|+||+|||||||.|
T Consensus 169 ~~~~~~q~s~d~m~~~A~~~~f~~dkqv~a~~vAa~v~EPvQGEGGFivp~k~fv~a~~~~C~ehgiVfiADEvQtGFAR 248 (427)
T TIGR00700 169 DIALDKQESLDDMVLAAIEALFVADKQVEAENVAAVVIEPVQGEGGFIVPAKEFVAAVLDLCKEHGIVFIADEVQTGFAR 248 (427)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCH
T ss_conf 43344222200389999998312103325010437897322478873338588999999975438758997254568000
Q ss_pred CCCCCCCCCCCC---CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
Q ss_conf 555310111245---45302103444444344321000111222223322345321111001233455432012221011
Q gi|254780432|r 225 TGKLFAYEWANV---KPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENV 301 (392)
Q Consensus 225 tG~~f~~e~~gi---~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~ 301 (392)
||++||+|||+. +||++|++|+|.+|+|+|+|+++.++|+...++..|.||+|||++||||+|+|++|++|.|.||+
T Consensus 249 TG~~FA~eH~~~dGl~PDLit~aKslA~GlPLSgV~GrAeimdApapGgLGGTyaGnPlacAAAlAvl~iIe~egL~ERa 328 (427)
T TIGR00700 249 TGKLFAIEHYDDDGLKPDLITVAKSLADGLPLSGVVGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLDIIEEEGLIERA 328 (427)
T ss_pred HCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 02112541006788875188786677356862111044121168888888775568879999999999863113124789
Q ss_pred HHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH----------HHHHHHHHHCCEE--EEECCCCEEEECCCC
Q ss_conf 2100002688999988679707550464009998724998----------9999999968989--962689889955898
Q gi|254780432|r 302 INIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP----------ALLAAKFRDECLL--TAPSSDNVVRILPPL 369 (392)
Q Consensus 302 ~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------~~~~~~l~~~Gll--~~~~~~~~irl~Ppl 369 (392)
+++|+++.++|-++++..| .|.+|||+|.|.++|+++++ +.++.+..++||+ +++..+|+|||.|||
T Consensus 329 ~qig~~~~d~l~~~k~~~p-~IgdvRglGaMiAvE~vkdp~T~EPda~~a~~ia~~A~a~GlllLTcG~~GNiIRfL~PL 407 (427)
T TIGR00700 329 EQIGKLVKDKLIELKEEVP-AIGDVRGLGAMIAVELVKDPDTTEPDAALAEKIAAAALAAGLLLLTCGIYGNIIRFLTPL 407 (427)
T ss_pred HHHHHHHHHHHHHHHHHCC-CHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHCCHHHHCCCC
T ss_conf 9987889888888876067-211120263357888654887888317999999999975682212303011555434886
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q ss_conf 6889999999999999999
Q gi|254780432|r 370 TITAEEIHEGLERIERTAI 388 (392)
Q Consensus 370 ~it~~eid~~i~~l~~al~ 388 (392)
+|+|+++++++++|+..|.
T Consensus 408 tI~D~ll~egl~Il~a~L~ 426 (427)
T TIGR00700 408 TISDELLDEGLDILEAALA 426 (427)
T ss_pred CCCHHHHHHHHHHHHHHHC
T ss_conf 5467889889999999852
No 71
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=0 Score=704.97 Aligned_cols=383 Identities=28% Similarity=0.407 Sum_probs=314.2
Q ss_pred CCEECCCCCCCCEEEEEECCCEEEEC-CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-----CCCCHHHH
Q ss_conf 31451558888748985010379967-9976464102267435787899999999999973145068-----75781899
Q gi|254780432|r 4 NDFLFNTYDQSDIRFEKGKGAWLFSE-NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-----LYQSTQQE 77 (392)
Q Consensus 4 ~~~~~~~~~~~p~~i~~a~G~~i~d~-dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-----~~~~~~~~ 77 (392)
++|.....+|+|+.|+||+|+||||. |||+||||+||+|++++||+||+|++|+..|.+...+..+ -..+....
T Consensus 9 ~~~~~~~~~p~~i~i~rgeG~~l~D~~dG~~yLD~~~g~~~~~lGh~hp~iv~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (431)
T TIGR03251 9 SRHMLTDGFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMA 88 (431)
T ss_pred HHHHCCCCCCCCEEEEEEECCEEEECCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 77422138996206886026999989999884170141998877079799999999999998876538566225569999
Q ss_pred HHHHHHHHHC---CCCCCCCCCCCCCCHHHHHHHHHHHHHCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9998652010---133312356555403567776654320013------4786002343546565432123455321134
Q gi|254780432|r 78 IFANHLIHST---FADRVFFTNSGAESVECAIKTARRYHYMAG------KTNKFRIVTFEGAFHGRTLATISAGGKLQYL 148 (392)
Q Consensus 78 ~la~~L~~~~---~~~~v~f~~SGseA~e~Aiklar~~~~~~g------~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~ 148 (392)
++++++++.. .+++++|+||||||||+|||+||+|....+ .+.+++||+|++||||+|.+++|+|+...++
T Consensus 89 ~l~~~l~~~~~~~~l~~v~f~~sGsEAvE~AiKlA~~y~~r~~~~~~~~~~~~~kiis~~~syHG~T~gals~t~~~~~~ 168 (431)
T TIGR03251 89 RFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRK 168 (431)
T ss_pred HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEECCCCCCCCCCCCCCCCC
T ss_conf 99999998508877785897586799999999999999764312345577776479997253659963333443687533
Q ss_pred CCCCCCCCC----------------CCCCC---CHHHHHHHH---HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 799986433----------------32221---002688754---10123322223332222112462101232211022
Q gi|254780432|r 149 EGFGPKIEG----------------FDQAK---FCDLQSLKN---QISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKIC 206 (392)
Q Consensus 149 ~~~~p~~~~----------------~~~~~---~~d~~~l~~---~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc 206 (392)
..+.|.... ..... ..+++.++. ..+++|||||+|||||+||+++||++||+++|++|
T Consensus 169 ~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAAvI~EPIqG~gG~~~~p~~yl~~lr~lc 248 (431)
T TIGR03251 169 TARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALC 248 (431)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 57788778777779887688887650025556899999999999738995799996777677798568989999999998
Q ss_pred CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHH
Q ss_conf 345721310110034444555310111245453021034444443443210001112222-2332234532111100123
Q gi|254780432|r 207 DDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACM-NQGSHGSTYGGNVLAMVLG 285 (392)
Q Consensus 207 ~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~-~~~~~~~T~~gnpl~~aaa 285 (392)
++||+|||+|||||||||||+||++|++||+|||+|+||+|++|.++++....+.....+ .++.+++||+|||++||||
T Consensus 249 ~~~giLLI~DEVqtGfGRtG~~fa~e~~gv~PDiv~~gKgl~~g~~~~~~~~~~~~~~~~~~~~~~~sT~~gnpla~aaa 328 (431)
T TIGR03251 249 DEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKTQVCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRA 328 (431)
T ss_pred HHCCCEEECCCCEECCCCCCCCHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 76275055341013677667744677507889989877722355188899999999986417877678888898999999
Q ss_pred HHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEEECCCCEE
Q ss_conf 3455432012221011210000268899998867970755046400999872499--89999999968989962689889
Q gi|254780432|r 286 EKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTAPSSDNVV 363 (392)
Q Consensus 286 ~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~~~~~~~i 363 (392)
+++|++++++++++|++++|++|+++|++++++||++|.+|||+|||+++|++.+ ...+.++++++|+++.+.++++|
T Consensus 329 la~l~ii~~e~l~~~v~~~g~~l~~~L~~l~~~~p~~V~dVRG~GLm~giel~~~~~~~~~~~~~~~~Gll~~~~g~~~i 408 (431)
T TIGR03251 329 TRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLYREGVLLLGCGERSI 408 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCEE
T ss_conf 98899986246999999999999999999987687824563013369999818816799999999978939974799989
Q ss_pred EECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 95589868899999999999999
Q gi|254780432|r 364 RILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 364 rl~Ppl~it~~eid~~i~~l~~a 386 (392)
||.|||+||++|||+++++|+++
T Consensus 409 r~~PPL~it~~eid~~~~~l~~V 431 (431)
T TIGR03251 409 RFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred EEECCCCCCHHHHHHHHHHHCCC
T ss_conf 99889308899999999997269
No 72
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=0 Score=681.40 Aligned_cols=372 Identities=27% Similarity=0.407 Sum_probs=323.3
Q ss_pred CCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 15588887489850103799679976464102267435787899999999999973145068757818999998652010
Q gi|254780432|r 8 FNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHST 87 (392)
Q Consensus 8 ~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~ 87 (392)
+.+|.+.|++|+||+|+||||.|||+||||++|+|++++||+||+|.+|+++|+++... ....++...+|+++|++..
T Consensus 28 ~~~~~~~P~~i~~g~G~~v~D~dG~~YlD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~--~~~~~~~~~~lAe~l~~~~ 105 (429)
T PRK00062 28 FKSVGGTPFFIKRAKGAYLYDVDGNEYIDYVLSWGPMILGHAHPAVVEAVIEAAEKGLS--FGAPTELEVKLAELVIERV 105 (429)
T ss_pred CCCCCCCCEEEEEEECCEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHC
T ss_conf 46899988599970349899699999988330766500189979999999999863576--6699789999999998558
Q ss_pred C-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCC-----CCCCC
Q ss_conf 1-333123565554035677766543200134786002343546565432123455321--134799986-----43332
Q gi|254780432|r 88 F-ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL--QYLEGFGPK-----IEGFD 159 (392)
Q Consensus 88 ~-~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~--~~~~~~~p~-----~~~~~ 159 (392)
| .++|+|+||||||||+|||+||.| |+|++||+|+++|||+|..+++.+++. .+..+..|. .+...
T Consensus 106 p~~~~v~f~~sGsEAve~AiklAR~~------tgr~~ii~~~g~YHG~~d~~l~~~gs~~~~~~~p~~~g~p~~~~~~~~ 179 (429)
T PRK00062 106 PSVEMVRMVNSGTEATMSAIRLARGF------TGRDKIIKFEGCYHGHSDSLLVKAGSGVATLGLPDSPGVPADFAKNTL 179 (429)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHH------HCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 98777987187699999999999761------188762111465668862056534897544678998899764447526
Q ss_pred CCCCHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22100268875410---123322223332222112462101232211022345721310110034444555310111245
Q gi|254780432|r 160 QAKFCDLQSLKNQI---SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV 236 (392)
Q Consensus 160 ~~~~~d~~~l~~~~---~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi 236 (392)
..||||++++++.+ +++|||||+|||||++|+++||++||+++|++|++||+|||+||||||| |||++|++|++||
T Consensus 180 ~~~~nd~~~~~~~l~~~~~~iAAvivEPi~g~~G~i~p~~~yl~~lr~lc~~~giLlI~DEV~tGf-RtG~~~a~e~~gv 258 (429)
T PRK00062 180 TAPYNDLEAVKAAFEEYGDEIACVIVEPVAGNMGCVPPLPGFLEGLRELTDENGALLIFDEVMTGF-RVAYGGAQGYYGV 258 (429)
T ss_pred EECCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCE-ECCCCHHHCCCCC
T ss_conf 305777888899998568865699974323778614488899999999960466479997142570-0576435417899
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH
Q ss_conf 453021034444443443210001112222233---22345321111001233455432012221011210000268899
Q gi|254780432|r 237 KPDIMTIAKGMGGGFPIGACLATNEVAACMNQG---SHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLT 313 (392)
Q Consensus 237 ~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~---~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~ 313 (392)
+|||+|+||+|+||+|+|||+++++||+.+.+. .|++||+|||++||||+++|++++++++++|++++|++|+++|+
T Consensus 259 ~PDi~t~gK~lggG~Pi~av~~~~eim~~~~~~g~~~~~gTf~gnpla~AAa~a~L~~l~~~~l~~~~~~~G~~l~~~l~ 338 (429)
T PRK00062 259 TPDLTTLGKVIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLRLLDQEGVYETLDALTDRLAEGLK 338 (429)
T ss_pred CCCEEEECCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 89689963234798753788677999986375898412587888879999999999999735799999999999999999
Q ss_pred HHHHHCCCEEEEECCCEEEEEEEECCCH---------------HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHH
Q ss_conf 9988679707550464009998724998---------------9999999968989962689889955898688999999
Q gi|254780432|r 314 AIKNRFPNMFLEVRGQGLLIGLKTVFSP---------------ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHE 378 (392)
Q Consensus 314 ~l~~~~~~~v~~vRG~Gl~~~ie~~~~~---------------~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~ 378 (392)
++.++| +++.+|||.|+|++++|..++ ..+...++++||++.+.+.... ..++.+|++|||+
T Consensus 339 ~~~~~~-~~~~~v~G~G~m~~i~f~~~~~~~~~~~~~~d~~~~~~~~~~m~~~Gv~~~p~~~~~~--~ls~aht~~did~ 415 (429)
T PRK00062 339 EAAEKA-GIPLVVNRVGSMFGIFFTDEPVTNYEDAKASDTERFARFFHAMLEEGVYLAPSQFEAG--FVSTAHTDEDIEK 415 (429)
T ss_pred HHHHHC-CCCEEEEEECCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCC--EEECCCCHHHHHH
T ss_conf 999877-9987999657478999648988898998644299999999999978864478642471--1033589999999
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 9999999999852
Q gi|254780432|r 379 GLERIERTAIKLS 391 (392)
Q Consensus 379 ~i~~l~~al~~L~ 391 (392)
.++++++++++|+
T Consensus 416 ~l~a~~~al~~l~ 428 (429)
T PRK00062 416 TLAAAREAFAALA 428 (429)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999984
No 73
>KOG1404 consensus
Probab=100.00 E-value=0 Score=673.15 Aligned_cols=368 Identities=37% Similarity=0.626 Sum_probs=331.3
Q ss_pred CCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 55888874898501037996799764641022674357878999999999999731450687578189999986520101
Q gi|254780432|r 9 NTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF 88 (392)
Q Consensus 9 ~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~ 88 (392)
.+|+..|+.|+||+|+||||.+|++|+|+.+|.+++++|||||+|.+|+.+|+.+++|....|.+++..+||++|+...|
T Consensus 27 ~~~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P 106 (442)
T KOG1404 27 TSYYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLP 106 (442)
T ss_pred ECCCCCCCEEEECCEEEEECCCCCEEEHHHCCEEEEECCCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCC
T ss_conf 13566885578442679986888650022087489973788847899999864532873012148708999999998688
Q ss_pred C--CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----
Q ss_conf 3--331235655540356777665432001347860023435465654321234553211347999864333222-----
Q gi|254780432|r 89 A--DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQA----- 161 (392)
Q Consensus 89 ~--~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~----- 161 (392)
. ++++|+||||||||+||||||.| |++..||+++++|||.|..++++|+...++..+.....++.+.
T Consensus 107 ~~l~~vfF~nsGsEANelal~mar~Y------t~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp 180 (442)
T KOG1404 107 GDLKVVFFVNSGSEANELALKMARLY------TGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDP 180 (442)
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHH------CCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 77128999558745889999999986------297158875055367735530244677645567888776512689983
Q ss_pred ---CCHH----------HHHHHHHC----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf ---1002----------68875410----123322223332222112462101232211022345721310110034444
Q gi|254780432|r 162 ---KFCD----------LQSLKNQI----SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 162 ---~~~d----------~~~l~~~~----~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
++.+ .+.+++.+ ++.|||||.|||||.||++.+|++||++++++|+++|.++|+|||||||||
T Consensus 181 ~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGR 260 (442)
T KOG1404 181 YRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGR 260 (442)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHCCCC
T ss_conf 11567997324568888887778887358775147875300167753138811899999999975978985434436455
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 5553101112454530210344444434432100011122222332-234532111100123345543201222101121
Q gi|254780432|r 225 TGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGS-HGSTYGGNVLAMVLGEKVLNIIQSDGFLENVIN 303 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~-~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~ 303 (392)
||+||+||+.|++|||+||+|+||||+|++||++++||++++.+.. |++||+|||++||+++++|+++++++|+||+++
T Consensus 261 tG~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~ 340 (442)
T KOG1404 261 TGHMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAE 340 (442)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 52510100168772099998652488700256327899999985213520337882567888999999988767888999
Q ss_pred HCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH-----------HHHHHHHHHCCEEEEE--CCCCEEEECCCCC
Q ss_conf 00002688999988679707550464009998724998-----------9999999968989962--6898899558986
Q gi|254780432|r 304 IAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-----------ALLAAKFRDECLLTAP--SSDNVVRILPPLT 370 (392)
Q Consensus 304 ~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-----------~~~~~~l~~~Gll~~~--~~~~~irl~Ppl~ 370 (392)
.|.+|+++|.+++++|| +|.||||+|||+|+|++.+. ..+-++|.+.|+++.. ..+|++|++|||+
T Consensus 341 vG~yl~~~l~~l~d~h~-iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPlc 419 (442)
T KOG1404 341 VGSYLLEKLAALKDKHP-IIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPLC 419 (442)
T ss_pred HHHHHHHHHHHHHHCCC-CEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCEEEECCCCCCEEEEECCCEE
T ss_conf 99999999998741487-35521354148888872266778894067788998998974856410423231798369854
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 8899999999999
Q gi|254780432|r 371 ITAEEIHEGLERI 383 (392)
Q Consensus 371 it~~eid~~i~~l 383 (392)
||.+|+|.+++.+
T Consensus 420 iT~edi~f~~~~~ 432 (442)
T KOG1404 420 ITKEDIDFAVEYF 432 (442)
T ss_pred CCHHHHHHHHHHH
T ss_conf 3489988999999
No 74
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=0 Score=660.55 Aligned_cols=367 Identities=24% Similarity=0.401 Sum_probs=319.7
Q ss_pred CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC-CCCC
Q ss_conf 887489850103799679976464102267435787899999999999973145068757818999998652010-1333
Q gi|254780432|r 13 QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHST-FADR 91 (392)
Q Consensus 13 ~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~-~~~~ 91 (392)
+.|++|+||+|+||||.|||+||||.+|+|+++|||+||+|++|+++|+++..+. ...++...+|+++|++.. +.++
T Consensus 34 ~~P~~i~~g~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~Ai~~q~~~g~~~--~~~~~~~~~lAe~l~~~~p~~~~ 111 (429)
T PRK12389 34 GAPVAMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAIQTAAENGVLY--GTPTELEIEFAKMLKEAIPSLEK 111 (429)
T ss_pred CCCEEEEEEECCEEEECCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHCCCC--CCCCHHHHHHHHHHHHHCCCCCE
T ss_conf 9996899604398997998999883221665400389899999999998238857--79989999999999985788766
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--C-----CCCCCCCCCCCCH
Q ss_conf 12356555403567776654320013478600234354656543212345532113479--9-----9864333222100
Q gi|254780432|r 92 VFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEG--F-----GPKIEGFDQAKFC 164 (392)
Q Consensus 92 v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~--~-----~p~~~~~~~~~~~ 164 (392)
|+|+||||||||+|||+||+| |+|++||+|+++|||+|.++++.++......+ . .+..+.+...||+
T Consensus 112 v~F~~sGsEA~e~AiklAR~~------tgr~kii~~~~~yHG~t~~~l~~~~~~~~~~~~p~~~g~p~~~~~~~~~~p~n 185 (429)
T PRK12389 112 VRFVNSGTEAVMTTIRVARAY------TGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPESIAQEVITVPFN 185 (429)
T ss_pred EEEECCCHHHHHHHHHHHHHH------CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 986268428999999999983------49996541145759985432231368853468987678876555652530789
Q ss_pred HHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 268875410---12332222333222211246210123221102234572131011003444455531011124545302
Q gi|254780432|r 165 DLQSLKNQI---SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM 241 (392)
Q Consensus 165 d~~~l~~~~---~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~ 241 (392)
|++++++.+ +++|||||+|||||++|+++||++||++||++|++||+|||+||||||| |+|.+|+++++||+|||+
T Consensus 186 d~~~l~~~l~~~~~~iAavI~EPi~g~~G~i~p~~~yl~~lr~lc~~~giLLI~DEV~TGf-R~g~~~a~~~~gV~PDi~ 264 (429)
T PRK12389 186 DIESYKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEEVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVIPDLT 264 (429)
T ss_pred CHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCCEEEEECCCCCC-CCCCCCHHHCCCCCCCHH
T ss_conf 9999999998458966899960223678801699899999999999719889996551031-566670765538999710
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHH
Q ss_conf 10344444434432100011122222---332234532111100123345543201222101121000026889999886
Q gi|254780432|r 242 TIAKGMGGGFPIGACLATNEVAACMN---QGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNR 318 (392)
Q Consensus 242 ~~gK~l~gG~P~sav~~~~~i~~~~~---~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~ 318 (392)
|+||+|+||||+|||+++++||+.+. +..|++||+|||++||||+++|++++++++++|++++|++|+++|+++.++
T Consensus 265 t~gK~lggG~Pi~av~g~~eim~~~~~~g~~~~~gTf~gnpla~AAalA~L~~l~~~~l~~~~~~~G~~l~~gl~~l~~~ 344 (429)
T PRK12389 265 ALGKIIGGGLPIGAYGGRQDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDELGAMLEEGILKLAEK 344 (429)
T ss_pred HEHHHCCCCCCEEEEEEHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 01032279864488767799998731579850258888688999999999999971689999999999999999999987
Q ss_pred CCCEEEEECCCEEEEEEEECCCH---------------HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 79707550464009998724998---------------999999996898996268988995589868899999999999
Q gi|254780432|r 319 FPNMFLEVRGQGLLIGLKTVFSP---------------ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERI 383 (392)
Q Consensus 319 ~~~~v~~vRG~Gl~~~ie~~~~~---------------~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l 383 (392)
|+ ++.+|+|.|.|+++.+..++ ..+...++++||++.|.+.+. ..+++.+|++|||++++++
T Consensus 345 ~~-~~~~v~~~g~~~~i~f~~~~v~~~~~~~~~~~~~~~~~~~~ml~~Gv~~~p~~~~~--~~ls~~hTe~dId~~l~a~ 421 (429)
T PRK12389 345 HN-ITITINRLKGALTVYFTDEKVTDYDQAERSDGEAFGKFFKLMLNQGINLAPSKYEA--WFLTTEHTEEDIEETIKAV 421 (429)
T ss_pred CC-CCEEEEECCCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHH
T ss_conf 79-98799414856899945898889899861579999999999997886456867777--4164678999999999999
Q ss_pred HHHHHHHC
Q ss_conf 99999852
Q gi|254780432|r 384 ERTAIKLS 391 (392)
Q Consensus 384 ~~al~~L~ 391 (392)
++++++|+
T Consensus 422 d~al~~la 429 (429)
T PRK12389 422 DRAFAQMA 429 (429)
T ss_pred HHHHHHHC
T ss_conf 99999759
No 75
>PRK06942 glutamate-1-semialdehyde 2,1-aminomutase; Validated
Probab=100.00 E-value=0 Score=656.30 Aligned_cols=371 Identities=23% Similarity=0.361 Sum_probs=320.9
Q ss_pred CCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 15588887489850103799679976464102267435787899999999999973145068757818999998652010
Q gi|254780432|r 8 FNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHST 87 (392)
Q Consensus 8 ~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~ 87 (392)
++.|.+.|++|+||+|+||||.|||+||||.+|+|++++||+||+|++|+++|+++... ....++...+|||+|++..
T Consensus 26 ~~~~~~~P~~i~rg~G~~l~D~dGn~YiD~~~g~g~~~lGH~~p~v~~Av~~q~~~~~~--~~~~~~~~~~lAe~L~~~~ 103 (425)
T PRK06942 26 FRSVGGTPRFVARAQGPYFWDADGKRYIDYIGSWGPMIVGHVHPEVLRAVQRVLADGFS--FGAPTEAEIEIAEEICKLV 103 (425)
T ss_pred CCCCCCCCEEEEEEECCEEEECCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHC
T ss_conf 67899987079970439899598998888234288654288979999999999985785--7899789999999999858
Q ss_pred C-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCC-----CCCCCCC
Q ss_conf 1-3331235655540356777665432001347860023435465654321234553211--347999-----8643332
Q gi|254780432|r 88 F-ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ--YLEGFG-----PKIEGFD 159 (392)
Q Consensus 88 ~-~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~--~~~~~~-----p~~~~~~ 159 (392)
| .++|+|+||||||||+|||+||.| |+|++||+|+++|||+|...++.++... +..+.. +......
T Consensus 104 P~~~~v~f~~SGsEA~e~AiklAR~~------tgr~~ii~~~g~YHG~~~~~~~~~~~~~~~~~~p~~~g~p~~~~~~~~ 177 (425)
T PRK06942 104 PSIEQVRMVSSGTEATMSALRLARGF------TGRSRIVKFEGCYHGHADSLLVKAGSGLLTFGNPTSAGVPADVAKHTT 177 (425)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHCCC------CCCCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 89885987388799999999996103------479865312345147741021213787655588865688765457664
Q ss_pred CCCCHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22100268875410---123322223332222112462101232211022345721310110034444555310111245
Q gi|254780432|r 160 QAKFCDLQSLKNQI---SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV 236 (392)
Q Consensus 160 ~~~~~d~~~l~~~~---~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi 236 (392)
..+|+|++++++.+ .++|||||+|||||++|+++||++||++||++|++||+|||+||||||| |||++|+++++||
T Consensus 178 ~~~~nd~~~l~~~~~~~~~~iAAvI~EPi~g~~G~i~p~~~yl~~lr~lc~~~gilLI~DEV~TGf-R~g~~~a~~~~gv 256 (425)
T PRK06942 178 VLEYNNVAALEEAFAAFGGEIAAVIVEPVAGNMNLVRGTPEFLNALRALCTKHGAVLIFDEVMCGF-RVALGGAQQHYGI 256 (425)
T ss_pred CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCC-CCCCCHHHHHHCC
T ss_conf 667676888999998438966899955644778750289899999999861378389997462574-0676538762189
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH
Q ss_conf 45302103444444344321000111222223---322345321111001233455432012221011210000268899
Q gi|254780432|r 237 KPDIMTIAKGMGGGFPIGACLATNEVAACMNQ---GSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLT 313 (392)
Q Consensus 237 ~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~---~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~ 313 (392)
+|||+|+||+|+||+|+||++++++||+.+.+ ..|++||+|||++||||+++|++++++++++|+.++|++|+++|+
T Consensus 257 ~PDi~t~gK~iggG~Pi~Av~g~~eim~~~~~~g~~~h~gTf~gnp~a~AAalatL~~~~~~~~~~~~~~~g~~L~~gl~ 336 (425)
T PRK06942 257 TPDLTCLGKVIGGGMPAAAFGGRRDIMAHLAPLGGVYQAGTLSGNPIAVAAGLKTLRLIQAPGFYDALAAQTRRLADGLA 336 (425)
T ss_pred CCCEEEEHHHCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 98799871005798870210259999975067888722789987879999999999998456799999999999999999
Q ss_pred HHHHHCCCEEEEECCCEEEEEEEECCCH---------------HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHH
Q ss_conf 9988679707550464009998724998---------------9999999968989962689889955898688999999
Q gi|254780432|r 314 AIKNRFPNMFLEVRGQGLLIGLKTVFSP---------------ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHE 378 (392)
Q Consensus 314 ~l~~~~~~~v~~vRG~Gl~~~ie~~~~~---------------~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~ 378 (392)
++.+++ ++...++|.|.|+++.|.... ..+...++++|+++.|.+.. ...-+...|++|||+
T Consensus 337 ~~~~~~-g~~~~~~g~gs~f~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gv~~~p~~~~--~~f~s~aHt~~did~ 413 (425)
T PRK06942 337 AEARAA-GVPFAADSIGGMFGLYFTERVPTSFAEVTKSDVERFNRFFHLMLDEGVYFAPSAYE--AGFVSSTHDDAVLDA 413 (425)
T ss_pred HHHHHC-CCCEEEEEECCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHH--CCCCCCCCCHHHHHH
T ss_conf 999977-99889965376479986899999999998554999999999999789677985242--176230379999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999985
Q gi|254780432|r 379 GLERIERTAIKL 390 (392)
Q Consensus 379 ~i~~l~~al~~L 390 (392)
.++++++++++|
T Consensus 414 ~l~a~~~a~~~l 425 (425)
T PRK06942 414 TLDAARRAFAAL 425 (425)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999739
No 76
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=0 Score=652.51 Aligned_cols=371 Identities=20% Similarity=0.268 Sum_probs=316.3
Q ss_pred CCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 55888874898501037996799764641022674357878999999999999731450687578189999986520101
Q gi|254780432|r 9 NTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF 88 (392)
Q Consensus 9 ~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~ 88 (392)
..|.+.|++|+||+|+||||.|||+||||++|+|++++||+||+|++|+++|+++..+ ..+.++...+||++|++..+
T Consensus 30 ~~~~~~P~~i~ra~G~~l~D~dGn~YiD~~~g~g~~~lGH~hp~V~~Av~~q~~~~~~--~~~~~~~~~~lAe~L~~~~~ 107 (433)
T PRK00615 30 RSVGITPPIVSSASGDIFIDSFGKTFIDFCGSWGSLIHGHSHPKICDAIQQGASRGTS--YGLTSEQEILFATELFSYLG 107 (433)
T ss_pred CCCCCCCCEEEEEECCEEEECCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHCC
T ss_conf 8889988569971439899698998777014188633167988999999999964665--67788899999999986279
Q ss_pred CC--CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCC----CCCCCCCCCC
Q ss_conf 33--31235655540356777665432001347860023435465654321234---553211347----9998643332
Q gi|254780432|r 89 AD--RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATIS---AGGKLQYLE----GFGPKIEGFD 159 (392)
Q Consensus 89 ~~--~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s---~s~~~~~~~----~~~p~~~~~~ 159 (392)
.+ +|+|+||||||||+|||+||.| |||++||+|+++|||++..+++ .+....... ...+..+...
T Consensus 108 ~~~~~V~F~nSGsEA~e~AiklAR~~------TgR~~Ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (433)
T PRK00615 108 LEDHKIRFVSSGTEATMTAVRLARGI------TGRSIIIKFLGCYHGHADTLLQGISFDETNLDNLTHLVDTDLPHPLTL 181 (433)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCC------CCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 86365997188399999999997226------488769999677678720012314578766678987777888878521
Q ss_pred CCCCHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22100268875410---123322223332222112462101232211022345721310110034444555310111245
Q gi|254780432|r 160 QAKFCDLQSLKNQI---SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV 236 (392)
Q Consensus 160 ~~~~~d~~~l~~~~---~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi 236 (392)
..||+|++.+++.+ .++|||||+||||+++|+++||++||++||++|++||+|||+||||||| |||++|++|+|||
T Consensus 182 ~~p~nd~~~~e~~~~~~~~~iAAvi~EPi~~~~G~i~p~~~yL~~lr~lc~~~giLLI~DEV~tGf-Rtg~~~a~e~~gV 260 (433)
T PRK00615 182 SLPYNDSQIFHEVMEQLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRFGSLSIMDEVVTGF-RVAFGGAAAIFDV 260 (433)
T ss_pred CCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC-EECCCHHHHHHCC
T ss_conf 678773999999998515430357875502468876899899999999987659389851341160-6254057787399
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH
Q ss_conf 453021034444443443210001112222233---22345321111001233455432012221011210000268899
Q gi|254780432|r 237 KPDIMTIAKGMGGGFPIGACLATNEVAACMNQG---SHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLT 313 (392)
Q Consensus 237 ~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~---~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~ 313 (392)
+|||+|+||+||||||+|||+++++||+.+.+. .|++||+|||++||||+++|++|+++++++++.++|++|+++|+
T Consensus 261 ~PDi~t~gK~lggG~Pi~Av~g~~~im~~~~~~g~~~~~gTf~gnpla~AAa~AtL~~l~~~~~~~~~~~~g~~l~~gl~ 340 (433)
T PRK00615 261 KPDITVYGKILGGGLPAAAVVAHRSIMDHLMPEGTIFQAGTLSGNPLAMAAGKASIELCREEGFYTQLSNLEQLFLSPIE 340 (433)
T ss_pred CCCEEEECCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 86178754556799870566686999986377898654688740699999999999998357899999999999999999
Q ss_pred HHHHHCCCEEEEECCCEEEEEEEECCCH---------------HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHH
Q ss_conf 9988679707550464009998724998---------------9999999968989962689889955898688999999
Q gi|254780432|r 314 AIKNRFPNMFLEVRGQGLLIGLKTVFSP---------------ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHE 378 (392)
Q Consensus 314 ~l~~~~~~~v~~vRG~Gl~~~ie~~~~~---------------~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~ 378 (392)
++.+++ ++...|+|.|.|+.+.|..++ ..+...++++||++.|..... ...+...|++|||+
T Consensus 341 ~~~~~~-g~~~~v~~~gs~~~~~f~~~~~~~~~~~~~~d~~~~~~f~~~~l~rGV~~~p~~~~~--~fis~aHt~edi~~ 417 (433)
T PRK00615 341 EMIRSQ-GFPVSLVRYGSMFSFFFRENRPTNLDEAQLSDVEKFQTFYQEAFSKGVYLSPSPFEA--SFLSSAHSMENLAY 417 (433)
T ss_pred HHHHHC-CCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCCCCCHHHHHH
T ss_conf 999976-998899755767999967999889999986359999999999997897889863226--46430249999999
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 9999999999852
Q gi|254780432|r 379 GLERIERTAIKLS 391 (392)
Q Consensus 379 ~i~~l~~al~~L~ 391 (392)
.++++.++++++-
T Consensus 418 t~~a~~~al~~~~ 430 (433)
T PRK00615 418 AQNVLIDSLEKIF 430 (433)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999998
No 77
>pfam00202 Aminotran_3 Aminotransferase class-III.
Probab=100.00 E-value=0 Score=654.46 Aligned_cols=321 Identities=46% Similarity=0.755 Sum_probs=300.8
Q ss_pred EEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCHHHHHHHHHHHHHCC--CCCCC
Q ss_conf 89850103799679976464102267435787899999999999973145068-7578189999986520101--33312
Q gi|254780432|r 17 RFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQSTQQEIFANHLIHSTF--ADRVF 93 (392)
Q Consensus 17 ~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~~~~~la~~L~~~~~--~~~v~ 93 (392)
.|+||+|+||||.|||+||||++|+|+++|||+||+|++|+++|++++.+++. .+.++...+|+++|++..| +++++
T Consensus 1 ~i~r~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~l~~~~p~~~~~v~ 80 (338)
T pfam00202 1 FITKAKGVWLYDVDGRRYLDFLSGIAVVNLGHCHPKIVQAVKEQADKLTHTSFRAFTTEPALQLAEKLAQLTPGGLDRVF 80 (338)
T ss_pred CEEECCCCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 96513589999599699999661988634169959999999999953898566755888999999999985788868799
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH-----
Q ss_conf 356555403567776654320013478600234354656543212345532113479998643332221002688-----
Q gi|254780432|r 94 FTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQS----- 168 (392)
Q Consensus 94 f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~----- 168 (392)
|++|||||||+|||+||+|+..++.|+|++||+|+++|||+|.+++++++.+.++..+.|..+.+..+|+++.+.
T Consensus 81 f~~sGseA~e~AiklAr~~~~~~g~t~r~~il~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 160 (338)
T pfam00202 81 FMNSGSEANETAIKLARQYAKKKGATGKTKIIAFSGGFHGRTLGALSVTGSSGYKKGFGPSLPGVYFLPYPDLEAAEEEL 160 (338)
T ss_pred EECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHHHH
T ss_conf 82876899999999999977753789988799993882588730588158855555677899994574899735420015
Q ss_pred ---------HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ---------75410123322223332222112462101232211022345721310110034444555310111245453
Q gi|254780432|r 169 ---------LKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD 239 (392)
Q Consensus 169 ---------l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD 239 (392)
+.+..+++|||||+|||||++|++++|++||+.||++|++||++||+|||||||||||++|++|++||+||
T Consensus 161 ~~~~~~~~~~~~~~~~~iaaviiEPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~gv~PD 240 (338)
T pfam00202 161 ACADEALRLIKAVHDDNIAAVIVEPIQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQTGFGRTGKLFACEHYGVTPD 240 (338)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCEECCCCCCCCCHHHHCCCCCE
T ss_conf 66899999999858997799999887788997679879999999997432775764531008775348740232498875
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHC
Q ss_conf 02103444444344321000111222223322345321111001233455432012221011210000268899998867
Q gi|254780432|r 240 IMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRF 319 (392)
Q Consensus 240 i~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~ 319 (392)
|+|+||+|+||||+|||++++++++.+.+..|++||+|||++|+||+++|+++++++++++++++|++|+++|++|+++
T Consensus 241 iv~~gK~l~~G~P~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~- 319 (338)
T pfam00202 241 IMTLAKALTGGLPLSAVLATAEIMQAFHPGSHGGTFGGNPLACAAALAVLDIIEDENLLQNAQEKGDYLRKGLLALQDK- 319 (338)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC-
T ss_conf 9995642458998753116477997177999587776649999999999999965589999999999999999985459-
Q ss_pred CCEEEEECCCEEEEEEEECC
Q ss_conf 97075504640099987249
Q gi|254780432|r 320 PNMFLEVRGQGLLIGLKTVF 339 (392)
Q Consensus 320 ~~~v~~vRG~Gl~~~ie~~~ 339 (392)
+.|.+|||+|||+++|+++
T Consensus 320 -~~v~~VRG~Gl~~g~elv~ 338 (338)
T pfam00202 320 -PVIGDVRGRGLMIAIEIVK 338 (338)
T ss_pred -CCEEECCCCCEEEEEEEEC
T ss_conf -9737733272499999879
No 78
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=0 Score=623.90 Aligned_cols=367 Identities=20% Similarity=0.266 Sum_probs=317.0
Q ss_pred CCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 88887489850103799679976464102267435787899999999999973145068757818999998652010133
Q gi|254780432|r 11 YDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFAD 90 (392)
Q Consensus 11 ~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~ 90 (392)
+.|+|++|+||+|+|+||.|||+|||+++|+|++++||+||+|.+|+++|+++..+ ..+.++...+++++|++..+.+
T Consensus 53 ~~p~P~~i~~a~G~~l~D~DG~~YiD~~~g~~~~~lGH~~p~v~~Av~~q~~~g~~--~~~~~~~~~~lae~l~~~~~~~ 130 (452)
T PRK07046 53 STPFPLFVAEARGARFTDVDGHRYVDFCLGDTGAMFGHSPAPVARALAEQARRGLT--TMLPSEDAAWVGEELARRFGLP 130 (452)
T ss_pred CCCCCEEEEEEEECEEEECCCCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHHCCC
T ss_conf 99998279974518899698999988561155121577999999999999872554--5578579999999989873886
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCC----CCCCCCCCCCCH
Q ss_conf 3123565554035677766543200134786002343546565432123455--3211347999----864333222100
Q gi|254780432|r 91 RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAG--GKLQYLEGFG----PKIEGFDQAKFC 164 (392)
Q Consensus 91 ~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s--~~~~~~~~~~----p~~~~~~~~~~~ 164 (392)
+++|+|||||||+.|||+||.+ |||++||+|+++|||++..+++.. +.+..+.++. +.......++||
T Consensus 131 ~~~f~~sGsEA~~~AirlAR~~------TgR~~Ii~f~g~YHG~~d~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~n 204 (452)
T PRK07046 131 YWQVATTASDANRFVLRWARAA------TGRKKILVFNGCYHGTVDDVFVDLADGRPVQRPGLLGQVHDLTATTRVVEFN 204 (452)
T ss_pred EEEEECCHHHHHHHHHHHHHHC------CCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCC
T ss_conf 1775377999999999998645------4997699963676786057898647998667898889887767764301668
Q ss_pred HHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 268875410-1233222233322221124621012322110223457213101100344445553101112454530210
Q gi|254780432|r 165 DLQSLKNQI-SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTI 243 (392)
Q Consensus 165 d~~~l~~~~-~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~ 243 (392)
|++++++.+ .++|||||+||||+++|+++||++||++||++|++||+|||+|||+| +|+|...+++.|||+|||+|+
T Consensus 205 d~~~le~~l~~~~iAAvi~EPi~g~~G~i~p~~~fl~~lrelc~~~giLLI~DEV~T--~r~g~Gg~~~~~Gv~PDl~t~ 282 (452)
T PRK07046 205 DLAALEAALADGDVACVLAEPAMTNIGMVLPEPGFWEALRELTRRHGTLLVIDETHT--ISSGPGGYTRAHGLEPDFLVV 282 (452)
T ss_pred CHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC--CCCCCCHHHHHHCCCCCEEEE
T ss_conf 789999971789867999976886788757999999999999975897999936661--001685387986879666764
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC---------CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHH
Q ss_conf 34444443443210001112222233---------223453211110012334554320122210112100002688999
Q gi|254780432|r 244 AKGMGGGFPIGACLATNEVAACMNQG---------SHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTA 314 (392)
Q Consensus 244 gK~l~gG~P~sav~~~~~i~~~~~~~---------~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~ 314 (392)
||+|+||+|+||+.+++++++.+... .+++||+|||++|||++++|+++++++++++++++|++|+++|++
T Consensus 283 gK~iggG~P~ga~~~~~~i~~~~~~~~~~~~~g~~~~ggTf~gnpla~AAa~A~L~~l~~~~~~~~~~~~g~~L~~gL~~ 362 (452)
T PRK07046 283 GKPIAGGVPCAVYGFSAALAERARAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTDAAYAHMFALAARLAAGLRA 362 (452)
T ss_pred HHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 44312888634340259999888752145678756878887879899999999999995552999999999999999999
Q ss_pred HHHHCCCEEEEECCCEEEEEEEECCCH----------------HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHH
Q ss_conf 988679707550464009998724998----------------9999999968989962689889955898688999999
Q gi|254780432|r 315 IKNRFPNMFLEVRGQGLLIGLKTVFSP----------------ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHE 378 (392)
Q Consensus 315 l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------------~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~ 378 (392)
+.++|+ +..+|||.|+|+.+.+...+ ..+...|+++|+++.|.+ |.+.++| .+|++|||+
T Consensus 363 ~~~~~~-~~~~v~g~G~~~~~~f~~~~~~~~~~~~~~~d~~~~~~~~~~ll~rGVll~p~~-n~~~~sp--~~T~edID~ 438 (452)
T PRK07046 363 TIARHG-LPWHVTRIGARVEFQFAPTPPRNGAEAGAALDGELEHALHLYLLNRGVLITPFH-NMMLVCP--QTTAEDVDR 438 (452)
T ss_pred HHHHCC-CCEEEEEECCEEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHCCEEECCCC-CCEEECC--CCCHHHHHH
T ss_conf 998679-975997557468999607887567888744339999999999997995588767-5477864--489999999
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 9999999999852
Q gi|254780432|r 379 GLERIERTAIKLS 391 (392)
Q Consensus 379 ~i~~l~~al~~L~ 391 (392)
.++++++++.+|.
T Consensus 439 ~v~a~~~al~el~ 451 (452)
T PRK07046 439 LVAAFDACLGELL 451 (452)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999850
No 79
>KOG1401 consensus
Probab=100.00 E-value=0 Score=619.12 Aligned_cols=387 Identities=38% Similarity=0.558 Sum_probs=358.1
Q ss_pred CEECCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 14515588887489850103799679976464102267435787899999999999973145068757818999998652
Q gi|254780432|r 5 DFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLI 84 (392)
Q Consensus 5 ~~~~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~ 84 (392)
....-+|+++|+++++++|++++|.||++||||+++||++.+||+||++.+|+.+|+.++.|+.+.+.+.+..+++++|.
T Consensus 29 ~~~~~t~~~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~ 108 (433)
T KOG1401 29 TRIVSTYARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLS 108 (433)
T ss_pred EEEEECCCCCCEEEECCEEEEEECCCCCEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
T ss_conf 17861046685466445134642688664413001100135588998999999998755344047532088899999997
Q ss_pred HHC---CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 010---13331235655540356777665432001347860023435465654321234553211347999864333222
Q gi|254780432|r 85 HST---FADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQA 161 (392)
Q Consensus 85 ~~~---~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~ 161 (392)
+.. ..+||||+||||||||.|||+||+.......+++++||+|+|||||+|+++++++++..|+-+++|..|++.+.
T Consensus 109 ~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~ 188 (433)
T KOG1401 109 AVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTA 188 (433)
T ss_pred HCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEE
T ss_conf 42356874179995697289999999999863534776641289985675776236667523466688887779853530
Q ss_pred CCHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 100268875410---12332222333222211246210123221102234572131011003444455531011124545
Q gi|254780432|r 162 KFCDLQSLKNQI---SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKP 238 (392)
Q Consensus 162 ~~~d~~~l~~~~---~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~P 238 (392)
+++|..++++.+ .++|||||+|||||+||++++.|+|++.||.+|+++|+++|+|||||||||+|..|++|+++++|
T Consensus 189 ~ynd~t~l~k~~e~~~~~IaAvIvEPiqGaGG~~p~~peFl~~l~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~P 268 (433)
T KOG1401 189 EYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTP 268 (433)
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCHHHHHHHHCCCC
T ss_conf 55889999999984788568999713457888656988999999999861596699603431765355277888858697
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHH
Q ss_conf 302103444444344321000111222223322---34532111100123345543201222101121000026889999
Q gi|254780432|r 239 DIMTIAKGMGGGFPIGACLATNEVAACMNQGSH---GSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAI 315 (392)
Q Consensus 239 Di~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~---~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l 315 (392)
||+|+||.|+||+|+||++++++|++.+.++.| ++||+|||++|+++.++|+.+.+++..+++.++++.|+++|.+.
T Consensus 269 DI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacs~~~~~l~~l~~pe~~k~vs~~~k~L~~~l~e~ 348 (433)
T KOG1401 269 DITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEY 348 (433)
T ss_pred CEEEEHHHCCCCCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 60231020368851578865577886518888655576657880555488999998718899998988878999999998
Q ss_pred HHHCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCC----CEEEECC--CCCCC--HHHHHHHHHHHHHHH
Q ss_conf 886797075504640099987249989999999968989962689----8899558--98688--999999999999999
Q gi|254780432|r 316 KNRFPNMFLEVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSSD----NVVRILP--PLTIT--AEEIHEGLERIERTA 387 (392)
Q Consensus 316 ~~~~~~~v~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~----~~irl~P--pl~it--~~eid~~i~~l~~al 387 (392)
..++++.+...+|+|+++++++..+........++.+++....+. ..+|++| ++++. +|.+.+.++++++.+
T Consensus 349 ~~~~~~~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~k~l 428 (433)
T KOG1401 349 LKKTPNSICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTILEKVL 428 (433)
T ss_pred HCCCCCCEEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 64798743677525889989983050543013445568888763246225179955520105686899999999999999
Q ss_pred HHHC
Q ss_conf 9852
Q gi|254780432|r 388 IKLS 391 (392)
Q Consensus 388 ~~L~ 391 (392)
..++
T Consensus 429 ~~l~ 432 (433)
T KOG1401 429 SALN 432 (433)
T ss_pred HHHC
T ss_conf 8742
No 80
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=0 Score=606.41 Aligned_cols=351 Identities=19% Similarity=0.300 Sum_probs=292.8
Q ss_pred CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC-CCCC
Q ss_conf 874898501037996799764641022674357878999999999999731450687578189999986520101-3331
Q gi|254780432|r 14 SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF-ADRV 92 (392)
Q Consensus 14 ~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~-~~~v 92 (392)
.|++|+||+|+||||.|||+|||+.+|+|++++||+||+|.+|+++|+++..+.. ..+....+++++|++..| .++|
T Consensus 30 ~P~~i~rg~G~~l~D~dG~~YlD~~~g~~~~~lGH~~p~i~~Ai~~Ql~~~~~~~--~~~~~~~~~ae~l~~~~p~~~~v 107 (431)
T PRK06209 30 APGFLQRGKGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFT--RPSAIELDAAELFLDLIDGAEMV 107 (431)
T ss_pred CCCEEEEEECCEEEECCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHHCCCCCEE
T ss_conf 9827996433989979879999846649989773796999999999997526554--76589999999999758986569
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCC---CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHH
Q ss_conf 23565554035677766543200134786002343-5465654---32123455321134799-9864333222100268
Q gi|254780432|r 93 FFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTF-EGAFHGR---TLATISAGGKLQYLEGF-GPKIEGFDQAKFCDLQ 167 (392)
Q Consensus 93 ~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~-~~~yHG~---t~~a~s~s~~~~~~~~~-~p~~~~~~~~~~~d~~ 167 (392)
+|+||||||||+|||+||+| |||++|+.. .+.|||. ..++...+. +. ..........+|+|++
T Consensus 108 ~F~nSGsEA~e~AlklAR~~------tgr~~i~~~~~~~~~~~~~~~~g~~~~~~------g~~~~~~~~~~~~~y~d~~ 175 (431)
T PRK06209 108 KFCKNGSDATSAAVRLARAY------TGRDLVARCADHPFFSTDDWFIGTTPMSA------GIPASVSALTKTFRYNDIA 175 (431)
T ss_pred EECCCCCHHHHHHHHHHHHH------HCCCEEEECCCCCEEECCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCHH
T ss_conf 87278837899999999997------59953777057755643566557876557------8887545666564765599
Q ss_pred HHHHHC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 875410---12332222333222211246210123221102234572131011003444455531011124545302103
Q gi|254780432|r 168 SLKNQI---SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA 244 (392)
Q Consensus 168 ~l~~~~---~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g 244 (392)
++++.+ +++|||||+||+||+ .||++||++||++|++||+|||+||||||| |||.+|++++|||+|||+|+|
T Consensus 176 ~le~~~~~~~~~iAAvIvEPi~g~----~p~~~fl~~lr~lc~~~giLLI~DEV~TGf-R~g~~~a~~~~gv~PDi~t~g 250 (431)
T PRK06209 176 SLEALFEDYPGRIACVILEPATAD----EPQDNFLHEVQRLCHENGALFILDEMITGF-RWHMRGAQKLYGIVPDLSCFG 250 (431)
T ss_pred HHHHHHHHCCCCEEEEEEECCCCC----CCCHHHHHHHHHHHHHCCCEEEECCCCCCC-CCCCCCHHHHCCCCCCEEEEH
T ss_conf 999987645566678885031377----897899999999998729079970560266-167522766208998799870
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC--------CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHH
Q ss_conf 44444434432100011122222--------3322345321111001233455432012221011210000268899998
Q gi|254780432|r 245 KGMGGGFPIGACLATNEVAACMN--------QGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIK 316 (392)
Q Consensus 245 K~l~gG~P~sav~~~~~i~~~~~--------~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~ 316 (392)
|+||||||+|||++++++|+... ...|++||+|||++||||+++|++++++++++|++++|++|+++|++++
T Consensus 251 K~iggG~Pi~Av~g~~eim~~~~~~~~~~~~~f~~~~T~~g~p~~~AAalatL~~~~~~~l~~~~~~~G~~L~~~l~~l~ 330 (431)
T PRK06209 251 KAMGNGFSISALAGKREYMELGGLEHTDFERVFLLSTTHGAETHALAAAIATMAIYREEDVIERLWEQGAKLAAGVNEAA 330 (431)
T ss_pred HHHHCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 13228888057778699764035556786654110457788879999999999999854499999999999999999999
Q ss_pred HHCCCEEEEECCCEEEEEEEECCCH----------HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 8679707550464009998724998----------999999996898996268988995589868899999999999999
Q gi|254780432|r 317 NRFPNMFLEVRGQGLLIGLKTVFSP----------ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 317 ~~~~~~v~~vRG~Gl~~~ie~~~~~----------~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
++|+ ++.+|||.|+|+++++...+ ..+...++++|++..+ +..+...|++|||+.+++++++
T Consensus 331 ~~~~-~~~~vr~~G~~~~~~f~~~~~~~~~~~~~~~~~~~~ml~~Gvl~~~-------~~iS~aHt~~di~~~l~a~~~a 402 (431)
T PRK06209 331 AEHG-LQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQEMIRRGVLMPS-------LVVSYAHGDADIERTIDAVHGA 402 (431)
T ss_pred HHCC-CCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEHHH-------HHHHHCCCHHHHHHHHHHHHHH
T ss_conf 7679-9779976401337899324455687699999999999958975124-------7760533999999999999999
Q ss_pred HHHHC
Q ss_conf 99852
Q gi|254780432|r 387 AIKLS 391 (392)
Q Consensus 387 l~~L~ 391 (392)
|.++.
T Consensus 403 l~~l~ 407 (431)
T PRK06209 403 LGVYR 407 (431)
T ss_pred HHHHH
T ss_conf 99999
No 81
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase; InterPro: IPR004639 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents glutamate-1-semialdehyde (GSA) aminotransferase (5.4.3.8 from EC), which catalyse a transamination reaction to produce 5-aminoaevulinic acid during the first stage of tetrapyrrole biosynthesis by the C5 pathway , . This enzyme has a high degree of similarity to amino acid transaminases, and is classed as a class III aminotransferase.; GO: 0042286 glutamate-1-semialdehyde 21-aminomutase activity, 0033014 tetrapyrrole biosynthetic process.
Probab=100.00 E-value=0 Score=607.29 Aligned_cols=371 Identities=29% Similarity=0.431 Sum_probs=320.4
Q ss_pred CCCCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 15588887489850103799679976464102267435787899999999999973145068757818999998652010
Q gi|254780432|r 8 FNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHST 87 (392)
Q Consensus 8 ~~~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~ 87 (392)
|.+..+.|+++.||+|+||||.|||+||||+.+||...|||+||+|++|+++|+++.+ ++.-+++...+||+++++..
T Consensus 24 FkaV~~~P~f~~~g~G~~l~DvDG~~YIDyv~swGPLILGHahp~v~~Av~e~lerG~--syG~PtE~Ei~lA~~i~~~v 101 (434)
T TIGR00713 24 FKAVGGTPFFVERGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPKVVEAVKEALERGT--SYGAPTEAEILLAKEIISRV 101 (434)
T ss_pred CCCCCCCCCEEECCCCCEEEECCCCEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCHHHHHHHHHHHHHC
T ss_conf 0267795675651676778833888001211000020117897689999999997301--26899889999999998640
Q ss_pred C-C--CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCC------
Q ss_conf 1-3--33123565554035677766543200134786002343546565432123455321134799--98643------
Q gi|254780432|r 88 F-A--DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGF--GPKIE------ 156 (392)
Q Consensus 88 ~-~--~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~--~p~~~------ 156 (392)
+ . +||+|+||||||+.+||||||-| |||++||-|+|||||+.-.-+.-.|+..-.-+. -|..+
T Consensus 102 ~~~t~e~vRfVnSGTEATMsAvRLARG~------TGR~~IiKFeGcYHGh~D~lLv~AGSGaaT~g~CG~P~SpGvP~~~ 175 (434)
T TIGR00713 102 PSVTEEMVRFVNSGTEATMSAVRLARGF------TGRDKIIKFEGCYHGHHDALLVKAGSGAATLGSCGLPTSPGVPEDF 175 (434)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHC------CCCCCEEEECCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCCCHHHH
T ss_conf 5554651686217648899999986310------5887278861764101232003545210104688778888870114
Q ss_pred --CCCCCCCHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf --33222100268875410---1233222233322221124621012322110223457213101100344445553101
Q gi|254780432|r 157 --GFDQAKFCDLQSLKNQI---SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY 231 (392)
Q Consensus 157 --~~~~~~~~d~~~l~~~~---~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~ 231 (392)
....+||||++++++.+ .++|||||+|||.|+-|+++|.+|||+.||++|+|||+|||+|||.||| |...--|+
T Consensus 176 ~k~Tl~~PYND~~a~~~~f~~~G~~iAgvIvEPv~GNmGvvpP~~eFL~~Lr~lt~e~g~LLI~DEV~TGF-Rva~~GAQ 254 (434)
T TIGR00713 176 AKLTLVLPYNDLEALEEAFEEYGEEIAGVIVEPVAGNMGVVPPKKEFLEGLRELTEEYGALLIFDEVITGF-RVALGGAQ 254 (434)
T ss_pred HHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCHH-HCCHHHCC
T ss_conf 31134045173899999998679834378861202576664885223589999998729577550221012-21332150
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCHHHHHCCH
Q ss_conf 11245453021034444443443210001112222233---22345321111001233455432012-221011210000
Q gi|254780432|r 232 EWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQG---SHGSTYGGNVLAMVLGEKVLNIIQSD-GFLENVINIAKI 307 (392)
Q Consensus 232 e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~---~~~~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~ 307 (392)
++|+|+|||+||||=||||+|+||+.+|+||||.+.|. -+..||+|||++++|+++||+.++++ .++++..++++.
T Consensus 255 ~yfgV~PDl~~lGKI~GGGlP~gA~gGrrEiM~~laP~G~vYQAGTlsGNPlam~AG~atLk~~~~~~~~Y~~l~~~~~~ 334 (434)
T TIGR00713 255 EYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEKGVYTELDELAKR 334 (434)
T ss_pred HHCCCCCCCEEECHHHCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 11378741034233233764510122675688431788774456435558899999999999853488834899999999
Q ss_pred HHHHHHHHHHHCCCEEEEECCCEEEEEEEEC-CCH---------------HHHHHHHHHCCEEEEECCCCEEEECCCCCC
Q ss_conf 2688999988679707550464009998724-998---------------999999996898996268988995589868
Q gi|254780432|r 308 LFEGLTAIKNRFPNMFLEVRGQGLLIGLKTV-FSP---------------ALLAAKFRDECLLTAPSSDNVVRILPPLTI 371 (392)
Q Consensus 308 l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~-~~~---------------~~~~~~l~~~Gll~~~~~~~~irl~Ppl~i 371 (392)
|.+.|+++..++ ++..+|-..|.|++|=|. .++ ..+.+.++++||++-|+.-++.-++ .-.
T Consensus 335 L~~g~~e~l~~~-gip~~~~~~gSMf~~FFtd~~~V~ny~~A~~SD~e~F~~Ff~~mL~~GVylpPS~FEa~F~S--~AH 411 (434)
T TIGR00713 335 LAEGLSEVLEDK-GIPHTVNRVGSMFSLFFTDEEEVTNYADAKKSDTELFAKFFHEMLEKGVYLPPSQFEACFIS--AAH 411 (434)
T ss_pred HHHHHHHHHHHC-CCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC--CCC
T ss_conf 999999999827-98589950440045665778898788999886189889999999858887898721155516--777
Q ss_pred CHHHHH----HHHHHHHHHHHHH
Q ss_conf 899999----9999999999985
Q gi|254780432|r 372 TAEEIH----EGLERIERTAIKL 390 (392)
Q Consensus 372 t~~eid----~~i~~l~~al~~L 390 (392)
|+|+|| ..++.++++++++
T Consensus 412 ~~E~i~yaq~~ti~a~~~~f~~~ 434 (434)
T TIGR00713 412 TEEDIEYAQTNTIEAAEEVFAEL 434 (434)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 72117899999999999998409
No 82
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminase; InterPro: IPR004637 This is a very small family, with two known examples at the time of model creation. This enzyme is a pyridoxal phosphate-containing class III aminotransferase and is quite similar to 4-aminobutyrate aminotransferase (2.6.1.19 from EC). Diaminobutyrate-2-oxoglutarate transaminase (2.6.1.76 from EC) is a homotetramer which catalyses the conversion of L-2,4-diaminobutyrate and 2-oxoglutarate to L-glutamate and L-aspartic 4-semialdehyde during 1,3-diaminopropane biosynthesis.; GO: 0008483 transaminase activity, 0009058 biosynthetic process.
Probab=100.00 E-value=0 Score=598.20 Aligned_cols=376 Identities=32% Similarity=0.576 Sum_probs=339.5
Q ss_pred ECCCCCC-CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHH--CCCCCCCCCCHHHHHHHHHH
Q ss_conf 5155888-87489850103799679976464102267435787899999999999973--14506875781899999865
Q gi|254780432|r 7 LFNTYDQ-SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEK--LWHVSNLYQSTQQEIFANHL 83 (392)
Q Consensus 7 ~~~~~~~-~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~--~~~~~~~~~~~~~~~la~~L 83 (392)
-+++|.+ +|.+|.+|+|+||||.||++|+||.+|.|+.++|||||.+++++++.++. ..|+-. ..++...+|.+.|
T Consensus 13 ~VRSY~R~lP~~~~~A~G~~~~D~~G~~Y~DflaGAG~L~~GHN~~~~~Q~~~~~l~~~~~~H~LD-l~T~~K~~F~~~l 91 (445)
T TIGR00709 13 NVRSYPRKLPLAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNLKQKIKDVLQSGLPLHTLD-LTTPLKDAFIEAL 91 (445)
T ss_pred CCCCCCCCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEHH-CCHHHHHHHHHHH
T ss_conf 113122344124240174279842775021222100021046788899999999986078554300-2200027899999
Q ss_pred HHHCCCC-----CCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2010133-----3123-565554035677766543200134786002343546565432123455321134799986433
Q gi|254780432|r 84 IHSTFAD-----RVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEG 157 (392)
Q Consensus 84 ~~~~~~~-----~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~ 157 (392)
....+.. .+.| ..||++|+|+||||||+| |||..||+|+++|||+|.|++++||+...+....-.+++
T Consensus 92 ~~~~~~~r~~~Y~l~F~GP~GA~a~EaA~KLA~~~------TGR~~visF~~GfHGMT~GaLa~TGN~~~~Na~~~~~~~ 165 (445)
T TIGR00709 92 LNILPKPRKEDYKLQFPGPSGADAVEAAIKLAKTY------TGRTNVISFSGGFHGMTIGALALTGNLFAKNAVEMLLPG 165 (445)
T ss_pred HHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHC------CCCCEEEEECCCCCHHHHHHHHHHCCCHHHCCCCCCCCC
T ss_conf 99706887763178718889853578999974311------787004763388510122136652242000124556777
Q ss_pred CCCCCCHH-----------------HHHHHHHCC------CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEE
Q ss_conf 32221002-----------------688754101------2332222333222211246210123221102234572131
Q gi|254780432|r 158 FDQAKFCD-----------------LQSLKNQIS------NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLI 214 (392)
Q Consensus 158 ~~~~~~~d-----------------~~~l~~~~~------~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI 214 (392)
+...||+. .+.+|.-+. +++||||+|.||||||+...|.+||+.+|++|++|+|+||
T Consensus 166 ~~~~PY~~~~~~P~G~GGeaG~~~~~~Y~ENF~~~~~SG~~KPAA~I~E~iQGEGG~~~A~~~wL~~i~~v~~~~~I~lI 245 (445)
T TIGR00709 166 VQFLPYPHEYRCPLGLGGEAGSNAVIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPVEWLQKIREVTRKHDIKLI 245 (445)
T ss_pred CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 62278842324766677034467899998775413667765760468863307885102247999999998742784799
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 01100344445553101112454530210344444-43443210001112222233223453211110012334554320
Q gi|254780432|r 215 FDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGG-GFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQ 293 (392)
Q Consensus 215 ~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~g-G~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~ 293 (392)
+||||.||+|||+||+||+.||+||+|||||++|| |.|++.+..+++ +|.|+|+.|..||.||.++++.+.++|++++
T Consensus 246 lD~VQAG~~R~G~~FaFE~AGI~PD~v~~SKavGGng~PLAv~~i~~~-fD~~~Pa~H~GTFRGN~lA~~TG~~~L~~~k 324 (445)
T TIGR00709 246 LDEVQAGFGRSGKMFAFEHAGIEPDVVVLSKAVGGNGLPLAVLLIKKE-FDAWQPAGHTGTFRGNQLAMVTGLEALNIIK 324 (445)
T ss_pred EECCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHH-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 822345701255511002478986768983033888506888776343-0456889866554301578888899999888
Q ss_pred CCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEEC-CCEEEEEEEECCCH----------------HHHHHHHHHCCEEEE
Q ss_conf 1222101121000026889999886797075504-64009998724998----------------999999996898996
Q gi|254780432|r 294 SDGFLENVINIAKILFEGLTAIKNRFPNMFLEVR-GQGLLIGLKTVFSP----------------ALLAAKFRDECLLTA 356 (392)
Q Consensus 294 ~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vR-G~Gl~~~ie~~~~~----------------~~~~~~l~~~Gll~~ 356 (392)
+++|.+|++++++++-+-|+++.++|| ++..|| |+|||.||+.+.+. +.++.+|++++|++-
T Consensus 325 d~~L~~N~QE~~E~~t~~L~~~~K~~P-~~~~VRkGRGlM~Gi~~~~E~~~~D~~G~~P~D~~LA~~I~~~CF~~~LllE 403 (445)
T TIGR00709 325 DDNLAQNAQERGERITSFLDDLIKEYP-CIGNVRKGRGLMIGIEIVDERKSKDAIGAYPADSELAAAIQGACFENGLLLE 403 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 766765554446789999999987378-5476205663354132102577422247886214899999863220573343
Q ss_pred --ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf --26898899558986889999999999999999852
Q gi|254780432|r 357 --PSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 357 --~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+..++++|+.||++|+++++.+.+.+|.+++.++.
T Consensus 404 ~~G~~~~V~~ll~p~~I~~~~~~~~~~~~~~av~e~~ 440 (445)
T TIGR00709 404 KGGREGEVVRLLCPITIDQEELEEVISRLKQAVEEAL 440 (445)
T ss_pred ECCCCCCEEEEECCEEECHHHHHHHHHHHHHHHHHHH
T ss_conf 0689973689706603245668999999999999999
No 83
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=0 Score=543.50 Aligned_cols=366 Identities=30% Similarity=0.434 Sum_probs=313.2
Q ss_pred CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC-CCC
Q ss_conf 8748985010379967997646410226743578789999999999997314506875781899999865201013-331
Q gi|254780432|r 14 SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFA-DRV 92 (392)
Q Consensus 14 ~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~-~~v 92 (392)
.|++++||+|+||||.|||+|||++++|+...|||+||.|.+|+++|+++.+. ..-+++...++||.|++..|. ++|
T Consensus 35 ~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~--fg~Pte~Ei~~Aell~~~~p~~e~v 112 (432)
T COG0001 35 YPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLS--FGAPTELEVELAELLIERVPSIEKV 112 (432)
T ss_pred CCEEEEECCCCEEEECCCCEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHHHHCCCCCEE
T ss_conf 98467745578699479987540130576500088987999999999972677--7899778999999999865865089
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCC-----CCCCCCCCCHH
Q ss_conf 23565554035677766543200134786002343546565432123455--321134799986-----43332221002
Q gi|254780432|r 93 FFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAG--GKLQYLEGFGPK-----IEGFDQAKFCD 165 (392)
Q Consensus 93 ~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s--~~~~~~~~~~p~-----~~~~~~~~~~d 165 (392)
.|+||||||+..|||+||.| |||+|||.|+|+|||++-..+.-. |-..+..+-.|- ...+..+||||
T Consensus 113 rfvnSGTEAtmsAiRlARa~------TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND 186 (432)
T COG0001 113 RFVNSGTEATMSAIRLARAY------TGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYND 186 (432)
T ss_pred EEECCHHHHHHHHHHHHHHH------HCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEECCCC
T ss_conf 98606408999999999876------479759997288888711878426767555789999999734534478845799
Q ss_pred HHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 68875410---123322223332222112462101232211022345721310110034444555310111245453021
Q gi|254780432|r 166 LQSLKNQI---SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMT 242 (392)
Q Consensus 166 ~~~l~~~~---~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~ 242 (392)
++++++.+ .++|||||+|||+|+.|+++|+++||++||++|++||++||+|||.||| |...--++++|||+|||.|
T Consensus 187 ~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGF-R~~~gGaq~~~gi~PDltt 265 (432)
T COG0001 187 LEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGF-RVALGGAQGYYGVEPDLTT 265 (432)
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHC-CCCCCCCCCCCCCCCCHHH
T ss_conf 999999998768967999954246788989898789999999999719489986221204-5477642010086963332
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCHHHHHCCHHHHHHHHHHHH
Q ss_conf 034444443443210001112222233---22345321111001233455432012-22101121000026889999886
Q gi|254780432|r 243 IAKGMGGGFPIGACLATNEVAACMNQG---SHGSTYGGNVLAMVLGEKVLNIIQSD-GFLENVINIAKILFEGLTAIKNR 318 (392)
Q Consensus 243 ~gK~l~gG~P~sav~~~~~i~~~~~~~---~~~~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~ 318 (392)
+||-||||+|+||+.+++|||+.+.+. .+.+||+|||++++|+.++|+.++++ .+.++..+++++|.++|+++.++
T Consensus 266 lGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~ 345 (432)
T COG0001 266 LGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAER 345 (432)
T ss_pred HHHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22440477520112569999963277887645677788689999999999998736518999999999999999999998
Q ss_pred CCCEEEEECCCEEEEEEEECCCH---------------HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 79707550464009998724998---------------999999996898996268988995589868899999999999
Q gi|254780432|r 319 FPNMFLEVRGQGLLIGLKTVFSP---------------ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERI 383 (392)
Q Consensus 319 ~~~~v~~vRG~Gl~~~ie~~~~~---------------~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l 383 (392)
+ .+-..|.+.|.|+++-|...+ ..+...++++|+++.|..-+..-++++ .|+++||+.++++
T Consensus 346 ~-g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~ea~flS~a--hte~di~~~~~a~ 422 (432)
T COG0001 346 H-GIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQFEAGFLSTA--HTEEDIDRTLEAA 422 (432)
T ss_pred H-CCCEEEEEECCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC--CCHHHHHHHHHHH
T ss_conf 3-998588620425899955899888999986356999999999996882347755554552004--6899999999999
Q ss_pred HHHHHHHC
Q ss_conf 99999852
Q gi|254780432|r 384 ERTAIKLS 391 (392)
Q Consensus 384 ~~al~~L~ 391 (392)
++++.++.
T Consensus 423 ~~~~~~~~ 430 (432)
T COG0001 423 DEAFKELA 430 (432)
T ss_pred HHHHHHHH
T ss_conf 99999863
No 84
>KOG1403 consensus
Probab=100.00 E-value=0 Score=500.92 Aligned_cols=369 Identities=25% Similarity=0.458 Sum_probs=313.0
Q ss_pred CCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC-C
Q ss_conf 888874898501037996799764641022674357878999999999999731450687578189999986520101-3
Q gi|254780432|r 11 YDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF-A 89 (392)
Q Consensus 11 ~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~-~ 89 (392)
|..-|+-|+||.|.|++|.+|++|||++++ +.-.|||||++++|..+||.++ .++..|.+....+.|+.|....| +
T Consensus 26 y~sDP~kivRaq~QYmfDE~g~~yLDCInN--VaHvghchp~VV~A~~kQmat~-~tN~RFlhd~lv~cA~~l~stlPeL 102 (452)
T KOG1403 26 YRSDPLKIVRAQGQYMFDEEGTRYLDCINN--VAHVGHCHPEVVRAGAKQMATI-STNNRFLHDELVQCARTLTSTLPEL 102 (452)
T ss_pred ECCCCHHHEHHCCCEEECCCCCCHHHHHHH--HHHCCCCCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 617961201010011115676638887642--2112557899999999887675-0452466778999999986108785
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C------
Q ss_conf 331235655540356777665432001347860023435465654321234553211347999864333222-1------
Q gi|254780432|r 90 DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQA-K------ 162 (392)
Q Consensus 90 ~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~-~------ 162 (392)
+-++|+||||||||.|+|+||.| |+++.+|+++++|||+-...|-+|. -++.++-+-..|++.|+ |
T Consensus 103 svc~F~NSGSEANDLALRLAR~f------tkhqDvItldHAYHGHl~s~mE~SP-YKF~~g~~v~kpd~VHVAPcPDvyr 175 (452)
T KOG1403 103 SVCFFVNSGSEANDLALRLARNF------TKHQDVITLDHAYHGHLQSVMEVSP-YKFNQGGGVAKPDYVHVAPCPDVYR 175 (452)
T ss_pred EEEEEECCCCHHHHHHHHHHHHH------CCCCCEEEEECHHCCCEEEEEECCC-EECCCCCCCCCCCEEEECCCCCCCC
T ss_conf 18999668861558999998751------2567548873000343001465064-4306898857876167457863125
Q ss_pred -------CH--H-----HHHHHHHC------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCC
Q ss_conf -------00--2-----68875410------1233222233322221124621012322110223457213101100344
Q gi|254780432|r 163 -------FC--D-----LQSLKNQI------SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGY 222 (392)
Q Consensus 163 -------~~--d-----~~~l~~~~------~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~ 222 (392)
++ | .+..++.+ ...|||+|.|.+|+-||-+.||.+|++.+.+..+.+|.++|+||||+||
T Consensus 176 GK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGF 255 (452)
T KOG1403 176 GKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGF 255 (452)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHCC
T ss_conf 61220138766500443037999999998527757999999998569813584327899999985179769842121043
Q ss_pred CCCC-CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 4455-531011124545302103444444344321000111222223--3223453211110012334554320122210
Q gi|254780432|r 223 GRTG-KLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAACMNQ--GSHGSTYGGNVLAMVLGEKVLNIIQSDGFLE 299 (392)
Q Consensus 223 GRtG-~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~--~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~ 299 (392)
||.| ++|+||.|++.|||+|+||.+|||+|+++|+++++|.+.+.. ..+++||+|||++||+++++|+++++++|++
T Consensus 256 GRvG~hyWafq~y~fiPDIVtmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ 335 (452)
T KOG1403 256 GRVGSHYWAFQTYNFIPDIVTMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQE 335 (452)
T ss_pred CCCCHHHHHHHHHCCCCCHHEECCCCCCCCEEEEEECCHHHHHHHCCCCCEEHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 32310354444524564330004657799702688536889998502660000046998065899999999974566778
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH----------HHHHHHHHHC-CEEEEEC--CCCEEEEC
Q ss_conf 112100002688999988679707550464009998724998----------9999999968-9899626--89889955
Q gi|254780432|r 300 NVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP----------ALLAAKFRDE-CLLTAPS--SDNVVRIL 366 (392)
Q Consensus 300 ~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------~~~~~~l~~~-Gll~~~~--~~~~irl~ 366 (392)
+++++|+.|..-|++++.+| .++.+|||.||+|||+++++. ..+..++++. ++++... +.|++++.
T Consensus 336 ha~~vG~~L~~lL~~~k~kh-~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiK 414 (452)
T KOG1403 336 HAQQVGEKLEVLLRRLKQKH-ECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIK 414 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCEEECC
T ss_conf 89988799999999876506-13101333227885200011123797378799999999886407870689987636437
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 898688999999999999999985
Q gi|254780432|r 367 PPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 367 Ppl~it~~eid~~i~~l~~al~~L 390 (392)
||+.++++.+++.+..|++.|.-+
T Consensus 415 PPmCFneena~e~v~~ld~iLT~m 438 (452)
T KOG1403 415 PPMCFNEENADEFVLGLDEILTVM 438 (452)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 984347312999999899999999
No 85
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase; InterPro: IPR004631 4-aminobutyrate aminotransferase eukaryotic (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known eukaryotic examples of the enzyme. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=100.00 E-value=0 Score=496.24 Aligned_cols=368 Identities=25% Similarity=0.394 Sum_probs=305.1
Q ss_pred CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHH-HHHHCCCCC-CC---CCCHHHHHHHHH-HHHH
Q ss_conf 88748985010379967997646410226743578789999999999-997314506-87---578189999986-5201
Q gi|254780432|r 13 QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKS-QSEKLWHVS-NL---YQSTQQEIFANH-LIHS 86 (392)
Q Consensus 13 ~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~-q~~~~~~~~-~~---~~~~~~~~la~~-L~~~ 86 (392)
.+++..+|+.|-||.|.|||.|||++|++++..+|||||.++|+++. ++.+. +++ ++ |.+..+...++. +++.
T Consensus 40 ~fl~dYekS~GNYl~DvDGN~lLDlYsQIsSiPiGYNnP~L~K~a~sPe~a~~-LinRPALGnfp~~~l~~~~~~g~~k~ 118 (469)
T TIGR00699 40 KFLADYEKSVGNYLVDVDGNVLLDLYSQISSIPIGYNNPALLKAAQSPEMATT-LINRPALGNFPSKDLAKILKSGILKV 118 (469)
T ss_pred HHHCCHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHH-HHCCCCCCCCCHHHHHHHHCCCCHHH
T ss_conf 11103011157645631430478888777521224668789986517245788-64473014676679999854881232
Q ss_pred CC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC----------------------CCCCCCCCCCCCCCCCCCCC
Q ss_conf 01--3331235655540356777665432001347860----------------------02343546565432123455
Q gi|254780432|r 87 TF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKF----------------------RIVTFEGAFHGRTLATISAG 142 (392)
Q Consensus 87 ~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~----------------------~ii~~~~~yHG~t~~a~s~s 142 (392)
.| .+.|++..|||+|||.|-|.|..|++.+.+-|-+ -|+||.+|||||++|++|.|
T Consensus 119 aPKg~~~v~~~~aG~dane~AfK~af~yYr~~~RGGp~~~Fs~eE~~s~m~N~~PG~P~~siLSF~~aFHGRlfGsLsTT 198 (469)
T TIGR00699 119 APKGQDSVYRAMAGSDANELAFKAAFMYYRSKQRGGPERDFSEEENESCMVNQAPGSPDLSILSFKAAFHGRLFGSLSTT 198 (469)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHC
T ss_conf 45210301144666426789999999999835898887531178877643168755850788852343103444420003
Q ss_pred CCCCCCC-CC----CCCCCCCCCCCCH-----------------HHHHHHHHCCCC---CCCCCCCCCCCCCCCCCCCHH
Q ss_conf 3211347-99----9864333222100-----------------268875410123---322223332222112462101
Q gi|254780432|r 143 GKLQYLE-GF----GPKIEGFDQAKFC-----------------DLQSLKNQISND---TAAILIEPIQGEGGVRKVPEE 197 (392)
Q Consensus 143 ~~~~~~~-~~----~p~~~~~~~~~~~-----------------d~~~l~~~~~~~---iAavi~Epv~g~~G~~~~~~~ 197 (392)
.+...++ ++ +|. .+|+...|+ .+|.|....... |||+||||||+|||+.+.+++
T Consensus 199 ~SKpiHKlD~PaF~WP~-A~FP~LkYPLeE~~~~N~~Ee~rCL~~vE~L~~~~~~pkrtVaA~IvEPIQSEGGDNHAS~~ 277 (469)
T TIGR00699 199 RSKPIHKLDIPAFDWPQ-APFPSLKYPLEEHVEENAKEEQRCLEEVEDLIKKWHKPKRTVAAIIVEPIQSEGGDNHASPD 277 (469)
T ss_pred CCCCCCCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHH
T ss_conf 47760317865777467-77876678702325754558889999999999731798615888886243478885343378
Q ss_pred HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC--CCCEEECCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 232211022345721310110034444555310111245--45302103444-444344321000111222223322345
Q gi|254780432|r 198 FLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV--KPDIMTIAKGM-GGGFPIGACLATNEVAACMNQGSHGST 274 (392)
Q Consensus 198 ~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi--~PDi~~~gK~l-~gG~P~sav~~~~~i~~~~~~~~~~~T 274 (392)
|+++||++++|||+++|+||||||.|=||++||||||++ -||||||||-+ ++|| .....++ -.-.+..+++|
T Consensus 278 Ff~KLr~i~~k~~v~FivDEVQTGvGaTGklWAHe~W~L~~P~D~vtFSKK~qtAGy----FFH~~~l-rPn~pYr~FNT 352 (469)
T TIGR00699 278 FFRKLRDITKKHNVAFIVDEVQTGVGATGKLWAHEHWNLDDPPDMVTFSKKFQTAGY----FFHDPAL-RPNKPYRQFNT 352 (469)
T ss_pred HHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECHHHHCCCC----CCCCCCC-CCCCCCCCCCC
T ss_conf 889999999885956899645508788633123002741113850220456412764----2367356-88844000354
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEEC--CCEEEEEEEECCC--HHHHHHHHHH
Q ss_conf 32111100123345543201222101121000026889999886797075504--6400999872499--8999999996
Q gi|254780432|r 275 YGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVR--GQGLLIGLKTVFS--PALLAAKFRD 350 (392)
Q Consensus 275 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vR--G~Gl~~~ie~~~~--~~~~~~~l~~ 350 (392)
|.|.|.-+....+++++|++++|++|++..|++|..+|++|+++||..+..+| |+|.+++.++..+ ...+...++-
T Consensus 353 W~GdP~r~l~~~~i~~eI~~~~L~~n~~~~Gd~Ly~GLe~L~~~YP~~~~nlRGKGrGTFiawD~p~~a~Rd~l~~~~r~ 432 (469)
T TIGR00699 353 WMGDPSRALILREIIQEIKRKDLLNNVAAVGDYLYTGLEDLQKKYPEKVQNLRGKGRGTFIAWDTPDEAKRDKLLLKARL 432 (469)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHCC
T ss_conf 45778899999988876422577888998767889989999975013440344676421574049887888999996223
Q ss_pred CCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8989962689889955898688999999999999999
Q gi|254780432|r 351 ECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 351 ~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
+|+.++++|.+.|||+|.|++.+.+.|-+++.|++.+
T Consensus 433 ~Gvn~GGcG~~aiRLRP~LvF~~hHA~ilL~~~~~~~ 469 (469)
T TIGR00699 433 NGVNIGGCGVKAIRLRPMLVFQKHHADILLEAIEKII 469 (469)
T ss_pred CCEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 8257626535424237530103556899999986309
No 86
>KOG1405 consensus
Probab=100.00 E-value=0 Score=439.00 Aligned_cols=371 Identities=27% Similarity=0.398 Sum_probs=302.2
Q ss_pred CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHH-HHHHCCCCC-CCCCCHHHHHHHHH----HHHH
Q ss_conf 88748985010379967997646410226743578789999999999-997314506-87578189999986----5201
Q gi|254780432|r 13 QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKS-QSEKLWHVS-NLYQSTQQEIFANH----LIHS 86 (392)
Q Consensus 13 ~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~-q~~~~~~~~-~~~~~~~~~~la~~----L~~~ 86 (392)
.+++..+|+.|.|++|.|||.+||.++.++++.+|||||.++++++. |+-+. .++ +...+-+..++++. |+..
T Consensus 57 ~F~~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~-lvnRPALg~fP~kd~~~~l~~~ll~~ 135 (484)
T KOG1405 57 HFFVDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATM-LVNRPALGNFPPKDFAEKLRQSLLSI 135 (484)
T ss_pred EEEHHHHHHCCCEEEECCCCEEEHHHHHHCCCCCCCCCHHHHHHHCCHHHHHH-HHCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 77501344217668954787630246565015667898899987348488888-70661015788066899999998764
Q ss_pred C--CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC--------------------CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0--1333123565554035677766543200134786--------------------00234354656543212345532
Q gi|254780432|r 87 T--FADRVFFTNSGAESVECAIKTARRYHYMAGKTNK--------------------FRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 87 ~--~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r--------------------~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
. |.+.|.++.+||.|||+|.|.|..|..++.+.++ --|++|+++|||||++++|.|.+
T Consensus 136 APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~S 215 (484)
T KOG1405 136 APKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHS 215 (484)
T ss_pred CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 85407778877505653388899999998751378899777888888705899998645554034104643013333457
Q ss_pred CCCCC-C---CCCCCCCCCCCCCH-----------------HHHHHHHHCC---CCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 11347-9---99864333222100-----------------2688754101---23322223332222112462101232
Q gi|254780432|r 145 LQYLE-G---FGPKIEGFDQAKFC-----------------DLQSLKNQIS---NDTAAILIEPIQGEGGVRKVPEEFLQ 200 (392)
Q Consensus 145 ~~~~~-~---~~p~~~~~~~~~~~-----------------d~~~l~~~~~---~~iAavi~Epv~g~~G~~~~~~~~l~ 200 (392)
...++ + |......|+...|+ ++|++..... ..|||+|+||||++||+.+.+++|++
T Consensus 216 KpIHKldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~ 295 (484)
T KOG1405 216 KPIHKLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFR 295 (484)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHCCCCCCCCCHHHHH
T ss_conf 66400688888897788743458745656551221366799999999997603797579986511025788668989999
Q ss_pred HHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC--CCCEEECCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 211022345721310110034444555310111245--45302103444-444344321000111222223322345321
Q gi|254780432|r 201 QLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV--KPDIMTIAKGM-GGGFPIGACLATNEVAACMNQGSHGSTYGG 277 (392)
Q Consensus 201 ~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi--~PDi~~~gK~l-~gG~P~sav~~~~~i~~~~~~~~~~~T~~g 277 (392)
+||++|+|||+.+|+||||||-|-||++||+|||++ .||+||++|.+ +||| ...++. -.-.+..+.+||.|
T Consensus 296 kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gGf-----fh~~~f-rpn~pYrifNTWmG 369 (484)
T KOG1405 296 KLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGGF-----FHDEEF-RPNEPYRIFNTWMG 369 (484)
T ss_pred HHHHHHHHCCEEEEEEEEECCCCCCCCEEEEHHCCCCCCCCCEEHHHHHHCCCC-----CCCCCC-CCCCHHHHHHHHCC
T ss_conf 999999864958996400007886675432020389999510110255522764-----247334-87844787654307
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH--HHHHHHHHHCCEEE
Q ss_conf 1110012334554320122210112100002688999988679707550464009998724998--99999999689899
Q gi|254780432|r 278 NVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP--ALLAAKFRDECLLT 355 (392)
Q Consensus 278 npl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~--~~~~~~l~~~Gll~ 355 (392)
.|.-..-..+++++|++++|+++++..|+.|.++|.+|.++||..+..+||+|.+++.++.... ..+...++-+|+.+
T Consensus 370 dP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~ 449 (484)
T KOG1405 370 DPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSGSIRDKLILIARLNGVNL 449 (484)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEE
T ss_conf 85888999999999858889988999999999889999886842554245663279973898178899999998769421
Q ss_pred EECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 62689889955898688999999999999999985
Q gi|254780432|r 356 APSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 356 ~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.++|...|||+|+|+.++.+.|-.+++|++++..|
T Consensus 450 GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~l 484 (484)
T KOG1405 450 GGCGDKSIRFRPSLVFRKHHADIFLDIFDKILAGL 484 (484)
T ss_pred CCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHCCC
T ss_conf 46542025403320114666889999999986049
No 87
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase; InterPro: IPR005815 All members of the seed alignment have been demonstrated experimentally to act as (2.6.1.62 from EC), an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae. ; GO: 0004015 adenosylmethionine-8-amino-7-oxononanoate transaminase activity, 0009102 biotin biosynthetic process.
Probab=100.00 E-value=0 Score=333.20 Aligned_cols=386 Identities=29% Similarity=0.450 Sum_probs=325.2
Q ss_pred CCCEECCCCCC----CCE-EEEEECCCEEEECCCC----EEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCC
Q ss_conf 43145155888----874-8985010379967997----6464102267435787899999999999973145068-757
Q gi|254780432|r 3 KNDFLFNTYDQ----SDI-RFEKGKGAWLFSENGI----PFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQ 72 (392)
Q Consensus 3 ~~~~~~~~~~~----~p~-~i~~a~G~~i~d~dG~----~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~ 72 (392)
+.+++||.|.. .|. .+++++|+.+.-.||+ +.+|..+.||+...||+||++.++.++|++++.|+.. .+.
T Consensus 11 d~~~~w~p~~~~~~~~~~~~~~~~~g~~~~~~~g~p~~~~~~d~~~~ww~~~~g~~~p~~~~~~~~~~~~~~~~~~gg~~ 90 (466)
T TIGR00508 11 DKRHIWHPYTSLSSPLPLYPVESADGVELTLEDGRPVDVRLIDGLSSWWAAIHGYNHPRLNAAAQKQLDKLSHVLFGGLT 90 (466)
T ss_pred HHHHCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 12211343222467643200003564168863788420333211013455440577524567888878765555523544
Q ss_pred CHHHHHHHHHHHHHC--CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 818999998652010--13331235655540356777665432001347860023435465654321234553211347-
Q gi|254780432|r 73 STQQEIFANHLIHST--FADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLE- 149 (392)
Q Consensus 73 ~~~~~~la~~L~~~~--~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~- 149 (392)
++....+++++++.. +.+.+++..||+-++|.++|++.+++...+...|++++++.++|||.|++++++.+......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~gd~~~~~~~cdp~~~~~~ 170 (466)
T TIGR00508 91 HEPAVELCRKLLKLTPEPLDCVFLADSGSVAVEVALKLALQYWKGKGEPERTKFLTLRNGYHGDTFGALSVCDPENGLHS 170 (466)
T ss_pred CHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCCCCEECCCCCCHHH
T ss_conf 31578999999973463100455305764024667788776542024111321000004545543342110266532123
Q ss_pred ---------CCCCCC---CCCC--CC----CCHH-----HHHHHHHCCCC-CCCCCCCCC-CCCCCCCCCCHHHHHHHHC
Q ss_conf ---------999864---3332--22----1002-----68875410123-322223332-2221124621012322110
Q gi|254780432|r 150 ---------GFGPKI---EGFD--QA----KFCD-----LQSLKNQISND-TAAILIEPI-QGEGGVRKVPEEFLQQLRK 204 (392)
Q Consensus 150 ---------~~~p~~---~~~~--~~----~~~d-----~~~l~~~~~~~-iAavi~Epv-~g~~G~~~~~~~~l~~l~~ 204 (392)
-|.|.+ ++.. .. ++++ ...+.+...++ ++++++||+ +|.||.++..+.|+.++++
T Consensus 171 ~~~~~~~~~~~~~~p~~~~g~p~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~gg~~~~~p~~~~~~~~ 250 (466)
T TIGR00508 171 LWKGYLPENLFAPAPSIVDGLPTSQVRFDEEWNEEDISPLAKLLELHGDETVAAVILEPIVQGAGGLRFYHPTYLKRVRA 250 (466)
T ss_pred HHCCCCCHHHHCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 32022220221256511115655556776531045677899999852254011233344440457641023789999999
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCC---------------CCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf 2234572131011003444455531011124---------------5453021034444443-44321000111222223
Q gi|254780432|r 205 ICDDIDALLIFDEVQTGYGRTGKLFAYEWAN---------------VKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQ 268 (392)
Q Consensus 205 lc~~~g~llI~DEV~tG~GRtG~~f~~e~~g---------------i~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~ 268 (392)
+|+++++++|+||+.|||||||+.|++++.+ +.||++|+||+++||| .+++.+.++++.+.+..
T Consensus 251 ~~~~~~~~~~~d~~~~g~g~~g~~~~~~~~~~~~~~~g~~p~~~~~~~pd~~c~g~~~~gg~~~~~~~~~~~~~~~~~~~ 330 (466)
T TIGR00508 251 LCKKYGLLLIADEIATGFGRTGKLFACEHAGKYQDQHGISPSDQIKVVPDILCLGKALTGGYLTLSATLTTDKVAETISS 330 (466)
T ss_pred HHHHHHHEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHCC
T ss_conf 86442010220113203575320110121001001027884322010320221100003430000001223456775406
Q ss_pred C--------CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHC-----CCEEEEECCCEEEEEE
Q ss_conf 3--------22345321111001233455432012221011210000268899998867-----9707550464009998
Q gi|254780432|r 269 G--------SHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRF-----PNMFLEVRGQGLLIGL 335 (392)
Q Consensus 269 ~--------~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~-----~~~v~~vRG~Gl~~~i 335 (392)
+ .|+.||.+||++|+++.+.++++.+..+.+++..+...+...+..+...- ...+.++|..|.+..+
T Consensus 331 ~~~p~~g~~~~gp~~~~~p~~c~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~g~~g~~~~~~~~~g~~g~~ 410 (466)
T TIGR00508 331 GEGPTGGCFLHGPTFLGNPLACAVAEASLALLLEGPWQKQVSAIESQLKRELSPLRKNPDNGLIGTGVKDVRVLGAIGVV 410 (466)
T ss_pred CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 77764521321642013324566666678877403046789999888887664321156665201001122222001010
Q ss_pred EEC--CCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 724--998999999996898996268988995589868899999999999999998
Q gi|254780432|r 336 KTV--FSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 336 e~~--~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
|.. .+...+...+.++|+|++|.+ ..+++.||++++.+++.+....+..++.+
T Consensus 411 ~~~~~~~~~~~~~~~~~~g~w~~p~g-~~~~~~pp~~~~~~~~~~~~~~~~~~~~~ 465 (466)
T TIGR00508 411 ELKEPVNVEELQKGFVEKGVWIRPFG-KLLYLLPPYVITSEELAKLTAALIEALKG 465 (466)
T ss_pred HCCCCCCHHHHHHHHHHCCCEECCCC-CEEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 00123578888778764374121135-36564176200448888999999987505
No 88
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=6e-30 Score=216.27 Aligned_cols=342 Identities=18% Similarity=0.237 Sum_probs=244.8
Q ss_pred CCCCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCC-CHHHHHHHHHHHHHCCCCCC---C--CCCHHHHHHHHHH
Q ss_conf 5888874898501037996799764641022674357878-99999999999973145068---7--5781899999865
Q gi|254780432|r 10 TYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHS-HPELVAILKSQSEKLWHVSN---L--YQSTQQEIFANHL 83 (392)
Q Consensus 10 ~~~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~-~p~i~~a~~~q~~~~~~~~~---~--~~~~~~~~la~~L 83 (392)
..++....+++..|.++.-.||+++|+|.|+ .-||-+ ||+|++|..+.+++....+. . ..++...+|+++|
T Consensus 20 ~l~R~~~~~~~~~~~~i~i~dG~~~lnf~Sn---dYLGL~~~p~v~~a~~~a~~~yG~gs~~Srl~~G~~~~h~~LE~~l 96 (395)
T PRK06939 20 GLYKEERVITSPQGADITVADGKEVINFCAN---NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEQKL 96 (395)
T ss_pred CCCCCCCCCCCCCCCEEEEECCCEEEEEECC---CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 9986452214788875895389389997767---6557889989999999999972999877685747839999999999
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20101333123565554035677766543200134786002343546565432123455321134799986433322210
Q gi|254780432|r 84 IHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKF 163 (392)
Q Consensus 84 ~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~ 163 (392)
.+..+.+.+.+.+||..||-.++..- .++..+|-.+.--|-.-...+-+++ ..+...++
T Consensus 97 A~~~g~e~allf~SGy~aN~~~i~aL---------~~~~d~i~~D~l~HaSiidG~~ls~------------a~~~~f~H 155 (395)
T PRK06939 97 AKFLGTEDAILYSSCFDANGGLFETL---------LGKEDAIISDALNHASIIDGVRLCK------------AKRYRYAN 155 (395)
T ss_pred HHHHCCCCEEEECCHHHHHHHHHHHH---------CCCCCEEEEECCCCHHHHHHHHHCC------------CCEEEECC
T ss_conf 99869994999755277678899996---------4799889984563588999998658------------94799668
Q ss_pred HHHHHHHHHCCC------CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCC-C-CCCCCCCCCCCCCC
Q ss_conf 026887541012------332222333222211246210123221102234572131011003-4-44455531011124
Q gi|254780432|r 164 CDLQSLKNQISN------DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQT-G-YGRTGKLFAYEWAN 235 (392)
Q Consensus 164 ~d~~~l~~~~~~------~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G-~GRtG~~f~~e~~g 235 (392)
||+++|++.+.. +---|++|.|.++.|.+.| |+++.++|++||++|++||--. | +|.+|+=. .+++|
T Consensus 156 nD~~~Le~~L~~~~~~~~~~~~ivtegVfSMdGDiap----L~~l~~L~~~y~a~L~vDeAH~~GvlG~~G~G~-~e~~g 230 (395)
T PRK06939 156 NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAN----LPEICDLADKYDALVMVDDSHAVGFLGENGRGT-VEHCG 230 (395)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC----HHHHHHHHHHHCEEEEEECCCCEEEECCCCCCH-HHHCC
T ss_conf 9999999999960021586289999667777876015----999999999727379861430000345899867-99809
Q ss_pred CC--CCEE--ECCCCCC---CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHCC-CCCCHHHHHC
Q ss_conf 54--5302--1034444---443443210001112222233223--45321111001233455432012-2210112100
Q gi|254780432|r 236 VK--PDIM--TIAKGMG---GGFPIGACLATNEVAACMNQGSHG--STYGGNVLAMVLGEKVLNIIQSD-GFLENVINIA 305 (392)
Q Consensus 236 i~--PDi~--~~gK~l~---gG~P~sav~~~~~i~~~~~~~~~~--~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g 305 (392)
+. .||+ +|||+++ ||| |.+++++.+.+.....+ +|.+-.|..+++++++|++++++ .+.++.+++.
T Consensus 231 l~~~vdi~~gTlsKA~~G~~Ggf----v~g~~~~i~~l~~~~r~~ifStalpp~~~aa~~~al~~~~~~~~~r~~L~~n~ 306 (395)
T PRK06939 231 VMDRVDIITGTLGKALGGASGGY----TAGKKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENA 306 (395)
T ss_pred CCCCCEEEECCCHHHHHCCCCCE----EECCHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_conf 99886899773276662476514----51667889999984712211579987999999999999874959999999999
Q ss_pred CHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEE-------ECCCCEEEECCCCCCCHHHH
Q ss_conf 00268899998867970755046400999872499--8999999996898996-------26898899558986889999
Q gi|254780432|r 306 KILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTA-------PSSDNVVRILPPLTITAEEI 376 (392)
Q Consensus 306 ~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~-------~~~~~~irl~Ppl~it~~ei 376 (392)
++|+++|+++--...+ +..-+..|-+..+ ...+.+.|+++|+++. |.+...||++..-..|++||
T Consensus 307 ~~~r~~l~~~g~~~~~------s~spI~pi~iG~~~~a~~~~~~L~~~Gi~v~~ir~PtVp~g~~rlRi~lta~ht~~di 380 (395)
T PRK06939 307 RYFREGMTAAGFTLGP------GEHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQL 380 (395)
T ss_pred HHHHHHHHHCCCCCCC------CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHH
T ss_conf 9999999967998689------9999799996999999999999997797482078998898985699887877999999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999985
Q gi|254780432|r 377 HEGLERIERTAIKL 390 (392)
Q Consensus 377 d~~i~~l~~al~~L 390 (392)
|++++.|+++-+|+
T Consensus 381 d~lv~~l~~v~~~l 394 (395)
T PRK06939 381 DRAIDAFEKVGKEL 394 (395)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999963
No 89
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.97 E-value=2.4e-29 Score=212.31 Aligned_cols=340 Identities=20% Similarity=0.226 Sum_probs=239.8
Q ss_pred CCCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCCCCC--CC---CCCHHHHHHHHHHHH
Q ss_conf 8887489850103799679976464102267435787-89999999999997314506--87---578189999986520
Q gi|254780432|r 12 DQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLWHVS--NL---YQSTQQEIFANHLIH 85 (392)
Q Consensus 12 ~~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~~~~--~~---~~~~~~~~la~~L~~ 85 (392)
++.-..+++..|.+++ .||++||||.|. .-||- +||++++|..+.+++..... .. ..++...+|+++|.+
T Consensus 20 ~r~~~~~~~~~g~~i~-i~gr~~lnFsSn---dYLGL~~hp~v~~a~~~a~~~yG~g~~~SRl~~G~~~~h~~LE~~lA~ 95 (387)
T PRK05958 20 YRRLRPREGAQGRWLV-VDGRRMLNFASN---DYLGLANHPELIAAAQQAARRYGVGSGGSRLVTGNSPAHEALEAELAE 95 (387)
T ss_pred CCCCCCCCCCCCCEEE-ECCEEEEEEECC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHH
T ss_conf 8615544688888599-899799985665---424778999999999999998389886563230686999999999999
Q ss_pred HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 10133312356555403567776654320013478600234354656543212345532113479998643332221002
Q gi|254780432|r 86 STFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCD 165 (392)
Q Consensus 86 ~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d 165 (392)
..+.+.+.+.+||..||-.++..- .++..+|-.+.--|-.-.....+++ ..+...++||
T Consensus 96 ~~g~e~allf~SGy~An~~~i~al---------~~~~d~ii~D~~~HaSi~dG~~ls~------------a~~~~f~HnD 154 (387)
T PRK05958 96 WFGAERALLFSSGYAANLAVLTAL---------VGKGDLIVSDKLNHASLIDGARLSR------------AEVRRYPHND 154 (387)
T ss_pred HHCCCCEEEECCCHHHHHHHHHHC---------CCCCCEEEEECCCCHHHHHHHHHCC------------CCEEEECCCC
T ss_conf 868996796455238666566532---------7899789971004698999887279------------9289968999
Q ss_pred HHHHHHHCC---CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCC-CC-CCCCCCCCCCCCCCCCC--
Q ss_conf 688754101---233222233322221124621012322110223457213101100-34-44455531011124545--
Q gi|254780432|r 166 LQSLKNQIS---NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQ-TG-YGRTGKLFAYEWANVKP-- 238 (392)
Q Consensus 166 ~~~l~~~~~---~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~-tG-~GRtG~~f~~e~~gi~P-- 238 (392)
+++|++.+. .+-..|++|.|.++.|.+.| |+.+.++|++||+.|++||-- .| +|++|+=. .+++++.|
T Consensus 155 ~~~Le~~L~~~~~~~~~iv~egvySMdGd~ap----L~~i~~L~~~y~~~L~vDeAH~~Gv~G~~G~G~-~e~~~~~~~v 229 (387)
T PRK05958 155 VDALEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGL-AEAAGLAGEI 229 (387)
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC----HHHHHHHHHHCCEEEEECCHHHCCCCCCCCCCH-HHHHCCCCCC
T ss_conf 99999999738898759997466577887668----999999999708478842622226337999848-9984788886
Q ss_pred CEE--ECCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHCC-CCCCHHHHHCCHHHHHHH
Q ss_conf 302--10344444434432100011122222332--2345321111001233455432012-221011210000268899
Q gi|254780432|r 239 DIM--TIAKGMGGGFPIGACLATNEVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQSD-GFLENVINIAKILFEGLT 313 (392)
Q Consensus 239 Di~--~~gK~l~gG~P~sav~~~~~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~ 313 (392)
||+ ++||++|+. =|.|++++++.+.+.... +..|.+..|..+++++++|++++++ ...++.+++.++|++.|+
T Consensus 230 di~~gTlsKA~gs~--GG~i~g~~~~i~~l~~~a~~~ifStalpP~~~aa~~~al~~i~~~~~~~~~L~~n~~~~~~~l~ 307 (387)
T PRK05958 230 VILVGTLGKALGSS--GAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILREEPERRERLAALIARLRAGLR 307 (387)
T ss_pred EEEECCCCCCCCCC--CEEEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89976054445677--4399507899999987390203158887799999999999986095999999999999986457
Q ss_pred HHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHCCEEEEEC-------CCCEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 998867970755046400999872499--899999999689899626-------89889955898688999999999999
Q gi|254780432|r 314 AIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDECLLTAPS-------SDNVVRILPPLTITAEEIHEGLERIE 384 (392)
Q Consensus 314 ~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~~~~-------~~~~irl~Ppl~it~~eid~~i~~l~ 384 (392)
++.-...+. ..-+..+.+..+ ...+.+.|+++|+++.+. +..+||+...-..|++|||++++.|.
T Consensus 308 ~~g~~~~~s------~spIipi~ig~~~~~~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~i~a~ht~~dId~l~~~l~ 381 (387)
T PRK05958 308 ALGLGLPDS------ESAIQPLIVGDNERALALAAALQAQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALA 381 (387)
T ss_pred HCCCCCCCC------CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 539985899------99879999699999999999999779528317899889998449999787799999999999999
Q ss_pred HHHHH
Q ss_conf 99998
Q gi|254780432|r 385 RTAIK 389 (392)
Q Consensus 385 ~al~~ 389 (392)
+++.+
T Consensus 382 e~~~~ 386 (387)
T PRK05958 382 EALAA 386 (387)
T ss_pred HHHHH
T ss_conf 99950
No 90
>TIGR00858 bioF 8-amino-7-oxononanoate synthase; InterPro: IPR004723 8-amino-7-oxononanoate synthase (2.3.1.47 from EC) is involved in biotin biosynthesis. Synonym(s): AONS, 8-amino-7-ketopelargonate synthase, 7-keto-8-amino-pelargonic acid synthetase, 7-KAP synthetase; GO: 0008710 8-amino-7-oxononanoate synthase activity, 0009102 biotin biosynthetic process.
Probab=99.96 E-value=3.2e-29 Score=211.49 Aligned_cols=337 Identities=18% Similarity=0.202 Sum_probs=243.2
Q ss_pred CCCEEEEEECCCEEEECCC--CEEEECHHHHHHHCCCC-CCHHHHHH-HHHHHHHCCCCCCC-----CCCHHHHHHHHHH
Q ss_conf 8874898501037996799--76464102267435787-89999999-99999731450687-----5781899999865
Q gi|254780432|r 13 QSDIRFEKGKGAWLFSENG--IPFLDFASGIAVNSLGH-SHPELVAI-LKSQSEKLWHVSNL-----YQSTQQEIFANHL 83 (392)
Q Consensus 13 ~~p~~i~~a~G~~i~d~dG--~~yiD~~~g~~~~~lGh-~~p~i~~a-~~~q~~~~~~~~~~-----~~~~~~~~la~~L 83 (392)
+.+..++++.+.++. .|| +++|||+|+ .-||= +||+|++| .++.+++....+.. ..++...+|+++|
T Consensus 3 R~l~~~~~~~~~~~~-~dgPP~~~l~FsSN---DYLGLa~hp~l~~af~~~~~~~~G~Gs~aSrLv~G~~~~H~~LE~~l 78 (378)
T TIGR00858 3 RQLRPLSRAPGPEVV-RDGPPRRLLNFSSN---DYLGLASHPELIQAFAQQAAEQYGAGSTASRLVTGNSPLHEELEEEL 78 (378)
T ss_pred CCCCCCCCCCCCEEE-ECCCCHHHHHCCCC---CCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 565543468866788-76887146531364---40100379889999999999866877367434037856899999999
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20101333123565554035677766543200134786002343546565432123455321134799986433322210
Q gi|254780432|r 84 IHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKF 163 (392)
Q Consensus 84 ~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~ 163 (392)
++..+.+.+...+||.-||-..|----. +.+-.+++.|++-+-+ .++|-...+... ..+...++
T Consensus 79 A~~kg~EaALlFsSGY~AN~Gvi~aL~~---~~~l~~~DlilsD~LN-----HASl~dG~rLS~--------A~~~~y~H 142 (378)
T TIGR00858 79 AEFKGTEAALLFSSGYLANVGVISALVG---KRVLEKGDLILSDALN-----HASLIDGCRLSG--------ARVLRYRH 142 (378)
T ss_pred HHHHCCCCEEEEHHHHHHHHHHHHHHHH---CCCCCCCCEEEEHHHH-----HHHHHHHHHCCC--------CCEEECCC
T ss_conf 9862882034200278999999998751---5765678604420254-----777898641598--------62787068
Q ss_pred HHHHHHHHHCC-----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC-CCC-CCCCCC
Q ss_conf 02688754101-----23322223332222112462101232211022345721310110034444555-310-111245
Q gi|254780432|r 164 CDLQSLKNQIS-----NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK-LFA-YEWANV 236 (392)
Q Consensus 164 ~d~~~l~~~~~-----~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~-~f~-~e~~gi 236 (392)
+|.++|++.+. .+=+-|+.|.|+++.|++.| |++|.++|++|+++|++|| .-|.|=.|. =.| .+++|+
T Consensus 143 ~D~~~L~~lL~~~~g~~~~~livTDGVFSMDGD~AP----L~~L~~la~~~~A~L~VDD-AHgtGVlG~~G~G~~~~fgl 217 (378)
T TIGR00858 143 NDVEHLERLLEKNRGKERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDD-AHGTGVLGEDGRGTLEHFGL 217 (378)
T ss_pred CCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCC----HHHHHHHHHHCCCEEEEEC-CCCCCCCCCCCCHHHHHCCC
T ss_conf 998999999974015137768897001316888489----7899999987098899986-54536628875414976598
Q ss_pred CC---CEE--ECCCCCCC--CCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCHHHHHHHHHHHH-CC-CCCCHHHHHC
Q ss_conf 45---302--10344444--434432100011122222--33223453211110012334554320-12-2210112100
Q gi|254780432|r 237 KP---DIM--TIAKGMGG--GFPIGACLATNEVAACMN--QGSHGSTYGGNVLAMVLGEKVLNIIQ-SD-GFLENVINIA 305 (392)
Q Consensus 237 ~P---Di~--~~gK~l~g--G~P~sav~~~~~i~~~~~--~~~~~~T~~gnpl~~aaa~a~L~~l~-~~-~l~~~~~~~g 305 (392)
.| ||+ ||||+||+ || |++++.+.+.+- ..++.+|.+-.|..|+|++++|++|+ ++ ...+++.++.
T Consensus 218 ~~~~~~i~~GTlSKAlGs~Ga~----V~g~~~l~~yL~n~AR~~If~TaLPPa~~aA~~aAl~~i~~~~~~rr~~L~~~~ 293 (378)
T TIGR00858 218 KPAPVDIQVGTLSKALGSYGAY----VAGSEALIDYLINRARTFIFSTALPPAVVAAALAALELIQEEEPWRREKLLALI 293 (378)
T ss_pred CCCCEEEEEEECCHHHHHCHHH----HHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 8887269986131665405256----354589999998415764232366588999999999972224864789999999
Q ss_pred CHHHHHHHHHH---HHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHCCEEE-------EECCCCEEEECCCCCCCH
Q ss_conf 00268899998---867970755046400999872499--899999999689899-------626898899558986889
Q gi|254780432|r 306 KILFEGLTAIK---NRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDECLLT-------APSSDNVVRILPPLTITA 373 (392)
Q Consensus 306 ~~l~~~L~~l~---~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~Gll~-------~~~~~~~irl~Ppl~it~ 373 (392)
++|+++++++. -...+.-+. ++-+=+-.+ .-.+.+.|+++|+++ .|.|..+||++-.-..|+
T Consensus 294 ~~~~~~l~~~~~~~f~~~~~~TP------I~P~~~G~~~~al~~a~~L~~~G~~v~AIRPPTVP~G~sRLR~Tl~A~Ht~ 367 (378)
T TIGR00858 294 ARLRKGLEALGKLVFQLMPSETP------IVPVIIGDEESALALAEELQEQGIFVGAIRPPTVPKGTSRLRLTLSAAHTE 367 (378)
T ss_pred HHHHHHHHHCCCCCCEECCCCCC------CEEEEECCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEECCCH
T ss_conf 99999987547663101678986------258870892899999999987794791025888877961045577404898
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780432|r 374 EEIHEGLERIE 384 (392)
Q Consensus 374 ~eid~~i~~l~ 384 (392)
+|||.+++.|+
T Consensus 368 ~di~~L~~~l~ 378 (378)
T TIGR00858 368 GDIDRLLEALK 378 (378)
T ss_pred HHHHHHHHHCC
T ss_conf 89999999739
No 91
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.96 E-value=7.2e-28 Score=202.68 Aligned_cols=317 Identities=19% Similarity=0.237 Sum_probs=219.4
Q ss_pred CEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCCCCC--C-CC--CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
Q ss_conf 76464102267435787-89999999999997314506--8-75--7818999998652010133312356555403567
Q gi|254780432|r 32 IPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLWHVS--N-LY--QSTQQEIFANHLIHSTFADRVFFTNSGAESVECA 105 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~~~~--~-~~--~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~A 105 (392)
|+||||.| +.-||- .||++++|+.+++++..... . .+ .++...+|+++|.+..+.+.+.+.+||..||-++
T Consensus 1 r~~l~f~s---~dYLgL~~~p~~~~a~~~a~~~~G~g~~~sr~~~G~~~~~~~lE~~la~~~g~e~al~~~sG~~an~~~ 77 (349)
T cd06454 1 KKVLNFCS---NDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGV 77 (349)
T ss_pred CCEEEEEC---CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
T ss_conf 95899766---632478989999999999999739988876736478799999999999986998199955707877888
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC-----CCCCC
Q ss_conf 7766543200134786002343546565432123455321134799986433322210026887541012-----33222
Q gi|254780432|r 106 IKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISN-----DTAAI 180 (392)
Q Consensus 106 iklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~-----~iAav 180 (392)
+..- .++..+|..+..-|..-...+.+++ ..+...++||+++|++.+.. .-..|
T Consensus 78 i~~l---------~~~~d~i~~D~~~H~si~~G~~~s~------------a~~~~f~Hnd~~~L~~~l~~~~~~~~~~~i 136 (349)
T cd06454 78 LSTL---------AGKGDLIISDSLNHASIIDGIRLSG------------AKKRIFKHNDMEDLEKLLREARRPYGKKLI 136 (349)
T ss_pred HHHC---------CCCCCEEEECCCCCHHHHHHHHCCC------------CCEEEECCCCHHHHHHHHHHHHCCCCCEEE
T ss_conf 8620---------5789779741534372886365244------------647997899999999999853225897699
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCC--CCCCCCCCCCCCCCCC--CCCEE--ECCCCCCCCCCCC
Q ss_conf 2333222211246210123221102234572131011003--4444555310111245--45302--1034444443443
Q gi|254780432|r 181 LIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQT--GYGRTGKLFAYEWANV--KPDIM--TIAKGMGGGFPIG 254 (392)
Q Consensus 181 i~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t--G~GRtG~~f~~e~~gi--~PDi~--~~gK~l~gG~P~s 254 (392)
++|.|.++.|.+.| |+.+.++|++||+.||+||... -+|++|.-. .++++. .+||+ ++||++|+ .-|
T Consensus 137 v~egv~Sm~Gd~ap----L~~l~~l~~~~~~~livDeAH~~Gv~G~~G~G~-~~~~~~~~~~di~~~tlsKa~G~--~Gg 209 (349)
T cd06454 137 VTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGV-EEFGGLTDDVDIIMGTLGKAFGA--VGG 209 (349)
T ss_pred EECCCCCCCCCCCC----HHHHHHHHHHHCCEEEEECHHHCCCCCCCCCCH-HHHCCCCCCCEEEECCCCCCCCC--CCC
T ss_conf 96576788877679----899999999829789972323317415888767-88658988667998536543467--771
Q ss_pred CCCCCCCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCC-E
Q ss_conf 210001112222233--22345321111001233455432012-2210112100002688999988679707550464-0
Q gi|254780432|r 255 ACLATNEVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQSD-GFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQ-G 330 (392)
Q Consensus 255 av~~~~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~-G 330 (392)
.+++++++.+.+... .+..|.+.+|..++++.++|++++++ +..++.+++.++|+++|+++- + + +.+. .
T Consensus 210 ~v~g~~~~i~~l~~~~~~~i~s~~l~p~~~aa~~~al~~l~~~~~~~~~L~~~~~~~~~~l~~~g--~-~----i~~~~~ 282 (349)
T cd06454 210 YIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKELG--F-P----VGGSPS 282 (349)
T ss_pred EEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC--C-C----CCCCCC
T ss_conf 24253568999986198857777768999999999999986395889999999999999999769--9-7----579999
Q ss_pred -EEEEE--EECCCHHHHHHHHHHCCEEEEEC-------CCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf -09998--72499899999999689899626-------8988995589868899999999999999
Q gi|254780432|r 331 -LLIGL--KTVFSPALLAAKFRDECLLTAPS-------SDNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 331 -l~~~i--e~~~~~~~~~~~l~~~Gll~~~~-------~~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
....+ +.......+.+.|+++|+++.+. +...||+..+...|++|||++++.|+++
T Consensus 283 ~~i~~~~~~~~~~a~~~~~~L~~~Gi~v~~~~~Ptvp~~~~~lRi~~sa~ht~edId~li~~l~ev 348 (349)
T cd06454 283 HIIPPLIGDDPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 727999869999999999999887962863798978999835999868779999999999999974
No 92
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=1.3e-27 Score=201.08 Aligned_cols=344 Identities=17% Similarity=0.197 Sum_probs=234.7
Q ss_pred CCCCCEEEEEECCCEEEE-----CCCCEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCCCCC---CC--CCCHHHHHH
Q ss_conf 888874898501037996-----79976464102267435787-89999999999997314506---87--578189999
Q gi|254780432|r 11 YDQSDIRFEKGKGAWLFS-----ENGIPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLWHVS---NL--YQSTQQEIF 79 (392)
Q Consensus 11 ~~~~p~~i~~a~G~~i~d-----~dG~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~~~~---~~--~~~~~~~~l 79 (392)
.++..-.+++..|.+++. .+|+++|+|.|+ .-||- +||+|++|+++++++..... .. ..++...+|
T Consensus 20 lyr~~~~~~~~~~~~~~~~~~~~~~g~~~l~f~SN---dYLGLs~~p~v~~a~~~a~~~yG~gs~gSrl~~G~~~~h~~L 96 (410)
T PRK13392 20 RYRVFADLEREAGSFPRAIDHGPETGKRVTIWCSN---DYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHEHVLL 96 (410)
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 98767403546788755420257899389897756---665778999999999999998099987758562787999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98652010133312356555403567776654320013478600234354656543212345532113479998643332
Q gi|254780432|r 80 ANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFD 159 (392)
Q Consensus 80 a~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~ 159 (392)
+++|.+..+.+.+.+.+||..||-.++..- .++.... +|-.+.--|-.-...+.+++ ..+.
T Consensus 97 E~~LA~f~g~e~allf~SGy~AN~g~i~aL------~~~~~~d-~i~~D~l~HaSiidG~rlS~------------a~~~ 157 (410)
T PRK13392 97 ERELADLHGKQSALLFTSGYVSNDAALSTL------ARLLPNC-LILSDALNHASMIEGIRRSG------------AEKQ 157 (410)
T ss_pred HHHHHHHHCCCCEEEECCHHHHHHHHHHHH------HCCCCCC-EEEECCCCCHHHHHHHHHCC------------CCEE
T ss_conf 999999869992999766478889999998------2779997-99987312288998787558------------9589
Q ss_pred CCCCHHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCC-C-CCCCCCCCCCCC
Q ss_conf 221002688754101----2332222333222211246210123221102234572131011003-4-444555310111
Q gi|254780432|r 160 QAKFCDLQSLKNQIS----NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQT-G-YGRTGKLFAYEW 233 (392)
Q Consensus 160 ~~~~~d~~~l~~~~~----~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G-~GRtG~~f~~e~ 233 (392)
..++||+++|++.+. ++.--|++|.|.++.|.+.| |+.+.++|++||+.|++||--. | +|.+|.= ..++
T Consensus 158 ~f~HnD~~~Le~~L~~~~~~~~~~IvtEgVfSMdGd~ap----L~~l~~L~~~y~a~L~VDeAH~~GvlG~~GrG-~~e~ 232 (410)
T PRK13392 158 VWAHNDLADLERQLASVDPDRPKLICFESCYSMDGDFAP----MAAICDLAEKYNAFTYVDEVHAVGLYGPRGGG-IAER 232 (410)
T ss_pred EECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC----HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC-HHHH
T ss_conf 971899899999997566678559997253124788689----99999999984959996131002413589987-7997
Q ss_pred CCCC--CCEE--ECCCCCCC--CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHCCC-CCCHHHHH
Q ss_conf 2454--5302--10344444--43443210001112222233223--453211110012334554320122-21011210
Q gi|254780432|r 234 ANVK--PDIM--TIAKGMGG--GFPIGACLATNEVAACMNQGSHG--STYGGNVLAMVLGEKVLNIIQSDG-FLENVINI 304 (392)
Q Consensus 234 ~gi~--PDi~--~~gK~l~g--G~P~sav~~~~~i~~~~~~~~~~--~T~~gnpl~~aaa~a~L~~l~~~~-l~~~~~~~ 304 (392)
+|+. +||+ ||||++|+ || |++++++.+.+.....+ +|-+-.|..+++++++|++++++. ..++..++
T Consensus 233 ~g~~~~vdi~~gTlsKA~Gs~Ggf----v~gs~~~id~l~~~ar~~IfStalpP~~~aa~~~al~~l~~~~~~r~~L~~~ 308 (410)
T PRK13392 233 DGLMDRIDMFQGTLSKAFGCLGGY----IAASADLVDFVRSFAPGFIFTTALPPPVVAGARAALRHLKTSQWERDAHQDR 308 (410)
T ss_pred CCCCCCCEEEECCCCCCCCCCCEE----EECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 289876679985065412367603----4237377899987387543666789999999999999987195889999999
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH--HHHHHHH-HHCCEEEE-------ECCCCEEEECCCCCCCHH
Q ss_conf 0002688999988679707550464009998724998--9999999-96898996-------268988995589868899
Q gi|254780432|r 305 AKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP--ALLAAKF-RDECLLTA-------PSSDNVVRILPPLTITAE 374 (392)
Q Consensus 305 g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~--~~~~~~l-~~~Gll~~-------~~~~~~irl~Ppl~it~~ 374 (392)
.++|+++|+++. ++ +. .+..-++-+-+..+. ..+.+++ .++|+++. |.+..+||++..-..|++
T Consensus 309 ~~~lr~~l~~~g--~~-~~---~s~s~Iipi~ig~~~~a~~~~~~ll~e~Gi~v~~i~~PtVP~g~~rLRi~lsA~Ht~~ 382 (410)
T PRK13392 309 TASLKAKLNANG--IP-VL---PSPSHIVPVMVGDPEKCKAISDLLMAEHGIYIQPINYPTVPRGTERLRITPSPLHTDE 382 (410)
T ss_pred HHHHHHHHHHCC--CC-CC---CCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCHH
T ss_conf 999999998679--98-48---9999879999799999999999998759989986788837999744987758668999
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999852
Q gi|254780432|r 375 EIHEGLERIERTAIKLS 391 (392)
Q Consensus 375 eid~~i~~l~~al~~L~ 391 (392)
|||++++.|.++.+|+.
T Consensus 383 dId~l~~~L~~v~~e~g 399 (410)
T PRK13392 383 DIDALVAALVAIWRELA 399 (410)
T ss_pred HHHHHHHHHHHHHHHCC
T ss_conf 99999999999999809
No 93
>PRK07505 hypothetical protein; Provisional
Probab=99.95 E-value=2.1e-26 Score=193.15 Aligned_cols=342 Identities=16% Similarity=0.149 Sum_probs=224.8
Q ss_pred EEEEEECCCEEEECCCCEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCCCC---CC--CCCCHHHHHHHHHHHHHCCC
Q ss_conf 489850103799679976464102267435787-8999999999999731450---68--75781899999865201013
Q gi|254780432|r 16 IRFEKGKGAWLFSENGIPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLWHV---SN--LYQSTQQEIFANHLIHSTFA 89 (392)
Q Consensus 16 ~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~~~---~~--~~~~~~~~~la~~L~~~~~~ 89 (392)
.++++.+|..++..||+++|||.|+ .-||- +||+|++|..+++++.... .. ...++...+|+++|.+..+.
T Consensus 33 ~~~~~~~~~~~~~~dGr~~lnF~Sn---dYLGL~~hp~v~~aa~~a~~~yG~g~~~s~~~~g~~~~h~~LE~~LA~~~g~ 109 (405)
T PRK07505 33 LIVKKSEGKVITLTDGKEFVNFVSC---SYLGLDNHPAIIDGAVDALRRTGVLDLSSSRTRVQSQILKDLEESLSELFGA 109 (405)
T ss_pred EEEECCCCCEEEEECCCEEEEEECC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 8995388885981389789750435---5358889999999999999986889876486414839999999999987398
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 331235655540356777665432001347860023435465654321234-5532113479998643332221002688
Q gi|254780432|r 90 DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATIS-AGGKLQYLEGFGPKIEGFDQAKFCDLQS 168 (392)
Q Consensus 90 ~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s-~s~~~~~~~~~~p~~~~~~~~~~~d~~~ 168 (392)
+ +.+.+||..||-..+-..-.- .-..++..+|.++.--|-. +. +.+. .. ....+...++||+++
T Consensus 110 e-al~f~sg~~An~g~i~~Lasg---~~~~~~~~~ii~D~~~HaS----l~~~~g~--~~-----s~a~~~~f~HnD~~~ 174 (405)
T PRK07505 110 S-VLTFTSCSAAHLGILPLLASG---HLTGGKPPHMVFDKYAHAS----LAILKGI--CA-----DETEVETIDHNDLDA 174 (405)
T ss_pred C-EEEECCHHHHHHHHHHHHHHC---CCCCCCCCEEEEECCCCCC----HHHHHHH--HC-----CCCCEEEECCCCHHH
T ss_conf 7-798732689999999999722---2248998789998764378----4556677--54-----899689867999999
Q ss_pred HHHHCCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCC-C-CCCCCCCCCCCCCCCCC---CEE-
Q ss_conf 7541012-332222333222211246210123221102234572131011003-4-44455531011124545---302-
Q gi|254780432|r 169 LKNQISN-DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQT-G-YGRTGKLFAYEWANVKP---DIM- 241 (392)
Q Consensus 169 l~~~~~~-~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G-~GRtG~~f~~e~~gi~P---Di~- 241 (392)
|++.... +-..+++|.|.++ |.+.| |+.+.++|++||++|++||--. | +|.+|+=+..++++..+ ||+
T Consensus 175 Le~~~~~~~~~~iV~EgVfSM-GdiAp----L~~l~~L~~~y~a~L~vDEAH~~Gv~G~~GrG~~~~~~~~~~~~~~i~~ 249 (405)
T PRK07505 175 LEDICKTNKRVAYVADGVYSM-GGIAP----VKELVDLQDKYGLFVYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIA 249 (405)
T ss_pred HHHHHHHCCCCEEEEEEEECC-CCHHH----HHHHHHHHHHCCEEEEEECCCEECCCCCCCCCCHHHHHCCCCCCEEEEE
T ss_conf 999874569948999842558-98345----9999999875676999965210012059997231687578888417998
Q ss_pred -ECCCCCCC--CCCCCCCC-CCCCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHH
Q ss_conf -10344444--43443210-001112222233--2234532111100123345543201222101121000026889999
Q gi|254780432|r 242 -TIAKGMGG--GFPIGACL-ATNEVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAI 315 (392)
Q Consensus 242 -~~gK~l~g--G~P~sav~-~~~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l 315 (392)
+|||++|+ || |+ +++++.+.+... .+..|.+-+|..++++++.+++++.++..++.+++ .+..+-+
T Consensus 250 gTlsKA~Gs~GG~----V~~g~~~~~~~l~~~ar~~ifStal~p~~~aa~~as~~i~~~~e~~~~~~~L----~~ni~~~ 321 (405)
T PRK07505 250 TSLGKAFGASGGV----IMLGYAEQIRLILRYAGPYAFSQPLNVAALGAISASAEIHLSSELDQLQQKL----HNNIALF 321 (405)
T ss_pred EECCCHHCCCCEE----EEECCHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH----HHHHHHH
T ss_conf 0032100156159----9978599999999718411136644799999999999998575479999999----9999999
Q ss_pred HHHCCCEEEEECCCE-EEEEEEECCC--HHHHHHHHHHCCEEEE-------ECCCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 886797075504640-0999872499--8999999996898996-------26898899558986889999999999999
Q gi|254780432|r 316 KNRFPNMFLEVRGQG-LLIGLKTVFS--PALLAAKFRDECLLTA-------PSSDNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 316 ~~~~~~~v~~vRG~G-l~~~ie~~~~--~~~~~~~l~~~Gll~~-------~~~~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
.+..+. +..+.. -+..+.+..+ ...+.+.|+++|+++. |.+..+||++..-..|++|||++++.|++
T Consensus 322 ~~~l~~---~~~~s~~pI~~v~ig~~~~a~~~~~~L~e~Gi~v~~i~~PtVp~g~~rlRi~l~A~hT~edId~l~~~L~~ 398 (405)
T PRK07505 322 DSLIPT---EQSGSFLPIRLIYIGDEDTAIKYAKQLKDAGFYTSPVFFPVVAKGNAGLRIMFRADHTNEEIKRLCSLLKE 398 (405)
T ss_pred HHHCCC---CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 974587---77899998799994999999999999997890187563883897982499874888999999999999999
Q ss_pred HHHHHC
Q ss_conf 999852
Q gi|254780432|r 386 TAIKLS 391 (392)
Q Consensus 386 al~~L~ 391 (392)
+++|..
T Consensus 399 v~~e~~ 404 (405)
T PRK07505 399 ILADYN 404 (405)
T ss_pred HHHHHC
T ss_conf 999855
No 94
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=1.9e-26 Score=193.37 Aligned_cols=342 Identities=15% Similarity=0.143 Sum_probs=233.3
Q ss_pred CCCCCEEEEEECCCEEEE-----CCCCEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCCCCCC---C--CCCHHHHHH
Q ss_conf 888874898501037996-----79976464102267435787-899999999999973145068---7--578189999
Q gi|254780432|r 11 YDQSDIRFEKGKGAWLFS-----ENGIPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLWHVSN---L--YQSTQQEIF 79 (392)
Q Consensus 11 ~~~~p~~i~~a~G~~i~d-----~dG~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~~~~~---~--~~~~~~~~l 79 (392)
.++.-..++|..|.+.+. ..++++|+|.|+ .-||- +||+|++|..+++++...... . ..++...+|
T Consensus 19 ~yr~~~~~~~~~~~~~~~~~~~~~g~r~~i~f~SN---dYLGL~~~p~v~~a~~~a~~~yG~gs~~Srl~~G~~~~h~~L 95 (404)
T PRK13393 19 RYRVFADLERQAGAFPRATHHGPDGPREVTVWCSN---DYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLL 95 (404)
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHH
T ss_conf 98767422445789862487337897479987743---445767899999999999998689987660201887999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98652010133312356555403567776654320013478600234354656543212345532113479998643332
Q gi|254780432|r 80 ANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFD 159 (392)
Q Consensus 80 a~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~ 159 (392)
+++|.+..+.+.+.+.+||.-||-.++..- .++.... +|-.+.--|-.-...+-+++ ..+.
T Consensus 96 E~~LA~~~g~e~allf~SGy~AN~g~i~aL------~~~~~~d-~i~~D~l~HaSi~dG~rls~------------a~~~ 156 (404)
T PRK13393 96 EAELADLHGKEAALLFTSGYVSNWAALSTL------ASRLPGC-VILSDELNHASMIEGIRHSR------------AETR 156 (404)
T ss_pred HHHHHHHHCCCCEEEECCHHHHHHHHHHHH------HCCCCCC-EEEEECCCCHHHHHHHHHCC------------CCEE
T ss_conf 999999869991999874488899999998------5789997-89998754598999888547------------9879
Q ss_pred CCCCHHHHHHHHHCCC----CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCC---CCCCCCCCCC
Q ss_conf 2210026887541012----33222233322221124621012322110223457213101100344---4455531011
Q gi|254780432|r 160 QAKFCDLQSLKNQISN----DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGY---GRTGKLFAYE 232 (392)
Q Consensus 160 ~~~~~d~~~l~~~~~~----~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~---GRtG~~f~~e 232 (392)
..++||+++|++.+.. ...-|++|.|.++.|++.| |+.+.++|++||+.|++||- -|| |.+|.= ..+
T Consensus 157 ~f~HnD~~~Le~~L~~~~~~~~~lIv~egVfSMdGDiap----L~el~~L~~~y~a~L~VDeA-H~~Gv~G~~G~G-~~e 230 (404)
T PRK13393 157 IFRHNDPADLERKLSDLDPHAPKLVAFESVYSMDGDIAP----IAEICDVADKHGAMTYLDEV-HAVGLYGPRGGG-IAE 230 (404)
T ss_pred EEECCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC----HHHHHHHHHHCCCEEEEECC-CCCCCCCCCCCC-HHH
T ss_conf 982799999999998562248808999655355788568----99999999740949998443-200103689987-888
Q ss_pred CCCC--CCCEE--ECCCCCCC--CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHCCC-CCCHHHH
Q ss_conf 1245--45302--10344444--4344321000111222223322--3453211110012334554320122-2101121
Q gi|254780432|r 233 WANV--KPDIM--TIAKGMGG--GFPIGACLATNEVAACMNQGSH--GSTYGGNVLAMVLGEKVLNIIQSDG-FLENVIN 303 (392)
Q Consensus 233 ~~gi--~PDi~--~~gK~l~g--G~P~sav~~~~~i~~~~~~~~~--~~T~~gnpl~~aaa~a~L~~l~~~~-l~~~~~~ 303 (392)
++|+ ++||+ +|||++|+ || |++++++.+.+..... ..|-+-.|..+++++++|++++++. ..++.++
T Consensus 231 ~~gl~~~vdi~~gTfsKA~Gs~Gg~----v~gs~~~id~L~~~ar~~IfStalpP~~~aa~~~al~~l~~~~~~r~~L~~ 306 (404)
T PRK13393 231 RDGLADRLTIIEGTLAKAFGVVGGY----ITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASIRHLKASSAERERHQD 306 (404)
T ss_pred HCCCCCCCEEEEEECCCCCCCCCCE----EECCHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 7389887628997177643357750----314768899999847286527798899999999999998619699999999
Q ss_pred HCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHC-CEEEE-------ECCCCEEEECCCCCCCH
Q ss_conf 0000268899998867970755046400999872499--89999999968-98996-------26898899558986889
Q gi|254780432|r 304 IAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDE-CLLTA-------PSSDNVVRILPPLTITA 373 (392)
Q Consensus 304 ~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~-Gll~~-------~~~~~~irl~Ppl~it~ 373 (392)
+..+|+++|+++- ++ + .....-++-|....+ ...+.+.++++ |+++. |.+..+||++..-..|+
T Consensus 307 n~~~~r~~L~~~G--~~-~---~~s~s~Iipi~ig~~~~a~~~~~~Ll~~~Gi~v~~i~~PtVP~g~~rLRi~lsA~ht~ 380 (404)
T PRK13393 307 RVARLRARLDQAG--VP-H---MDNPSHIVPVMVGDAVLCKQISDLLLDRYGIYVQPINYPTVPRGTERLRITPSPLHTD 380 (404)
T ss_pred HHHHHHHHHHHCC--CC-C---CCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCH
T ss_conf 9999999999669--99-7---8999887999969999999999999861898999888985899973599876887999
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999985
Q gi|254780432|r 374 EEIHEGLERIERTAIKL 390 (392)
Q Consensus 374 ~eid~~i~~l~~al~~L 390 (392)
+|||++++.|+++.+++
T Consensus 381 ~did~l~~~L~~v~~~l 397 (404)
T PRK13393 381 ADIEHLVQALSEIWARL 397 (404)
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999999983
No 95
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.95 E-value=1.9e-26 Score=193.36 Aligned_cols=337 Identities=16% Similarity=0.174 Sum_probs=228.3
Q ss_pred EEEEECC-----CEEEECCCCEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCCCCCC---C--CCCHHHHHHHHHHHH
Q ss_conf 8985010-----3799679976464102267435787-899999999999973145068---7--578189999986520
Q gi|254780432|r 17 RFEKGKG-----AWLFSENGIPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLWHVSN---L--YQSTQQEIFANHLIH 85 (392)
Q Consensus 17 ~i~~a~G-----~~i~d~dG~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~~~~~---~--~~~~~~~~la~~L~~ 85 (392)
.+++..| .|+....++++++|.|+ .-||- +||+|++|+.+++++...... + ..++...+|+++|.+
T Consensus 25 ~~~~~~g~~~~~~~~~~~g~r~~~~FsSN---dYLGLs~~p~v~~a~~~a~~~~G~gs~gSrl~~G~~~~h~~LE~~LA~ 101 (406)
T PRK09064 25 DLERQAGRFPYATWHGPDGAREVTVWCSN---DYLGMGQHPKVIEAMHEALDRCGAGAGGTRNISGTNHYHVELERELAD 101 (406)
T ss_pred CCCCCCCCCCCCEEEECCCCEEEEEEECC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 02435578874257544798699984654---435777999999999999998489987777040587999999999999
Q ss_pred HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 10133312356555403567776654320013478600234354656543212345532113479998643332221002
Q gi|254780432|r 86 STFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCD 165 (392)
Q Consensus 86 ~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d 165 (392)
..+.+.+...+||-.||-..+-..- +......|++ +.--|-.-...+-+++- .+...++||
T Consensus 102 ~~g~e~allf~SGy~AN~g~i~aL~------~~~p~~~i~~-D~l~HASiidG~rls~a------------~~~~f~HND 162 (406)
T PRK09064 102 LHGKEAALVFTSGYVSNDATLSTLA------KLIPGCVIFS-DELNHASMIEGIRRSGA------------EKHIFRHND 162 (406)
T ss_pred HHCCCCEEEECCHHHHHHHHHHHHH------CCCCCCEEEE-ECCCCHHHHHHHHHCCC------------CEEEECCCC
T ss_conf 8588858997741788899999985------6799968998-14233248999875599------------589947999
Q ss_pred HHHHHHHCCC----CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC---CCCCCCCCCCCCCC-
Q ss_conf 6887541012----332222333222211246210123221102234572131011003444---45553101112454-
Q gi|254780432|r 166 LQSLKNQISN----DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG---RTGKLFAYEWANVK- 237 (392)
Q Consensus 166 ~~~l~~~~~~----~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G---RtG~~f~~e~~gi~- 237 (392)
+++|++.+.. ..--|++|.|.++.|.+.| |+.+.++|++||+.|++||- -|+| .+|+= ..+++|+.
T Consensus 163 ~~~Le~~L~~~~~~~~~iIvtEgVfSMdGDiap----L~~l~~l~~~y~a~L~VDeA-H~~Gv~G~~G~G-~~e~~g~~~ 236 (406)
T PRK09064 163 VAHLEELLAAADPDRPKLIAFESVYSMDGDIAP----IAEICDLADKYNAMTYLDEV-HAVGMYGPRGGG-IAERDGLMD 236 (406)
T ss_pred HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC----HHHHHHHHHHHCCEEEEECC-CCCCCCCCCCCC-HHHHCCCCC
T ss_conf 899999998377789709999700016787657----99999999860959999622-102203688877-398729866
Q ss_pred -CCEE--ECCCCCCC--CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHCC-CCCCHHHHHCCHHH
Q ss_conf -5302--10344444--434432100011122222332--2345321111001233455432012-22101121000026
Q gi|254780432|r 238 -PDIM--TIAKGMGG--GFPIGACLATNEVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQSD-GFLENVINIAKILF 309 (392)
Q Consensus 238 -PDi~--~~gK~l~g--G~P~sav~~~~~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~ 309 (392)
.|++ ||||++|+ || |++++++.+.+.... +.+|.+-.|..+++++++|++++++ ...++.+++.++|+
T Consensus 237 ~vdi~~gTfsKA~Gs~Ggf----v~gs~~~id~L~~~ar~~IfStalpp~~~aa~~~al~~l~~~~~~r~~L~~n~~~~r 312 (406)
T PRK09064 237 RIDIIEGTLAKAFGVMGGY----IAGSASLIDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLK 312 (406)
T ss_pred CCEEEEEECCCCCCCCCEE----ECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 6707992166523577504----317889999998718530026789999999999999998709077899999999999
Q ss_pred HHHHHHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHHHHHC-CEEEE-------ECCCCEEEECCCCCCCHHHHHHH
Q ss_conf 8899998867970755046400999872499--89999999968-98996-------26898899558986889999999
Q gi|254780432|r 310 EGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAKFRDE-CLLTA-------PSSDNVVRILPPLTITAEEIHEG 379 (392)
Q Consensus 310 ~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~l~~~-Gll~~-------~~~~~~irl~Ppl~it~~eid~~ 379 (392)
++|+++- ++ +. ....-++-+-+..+ ...+.+.++++ |+++. |.+..+||++..-..|++|||++
T Consensus 313 ~~l~~~G--~~-~~---~s~spIipi~ig~~~~~~~~~~~Ll~~~Gi~v~~I~~PtVP~g~~rLRi~l~a~ht~edid~l 386 (406)
T PRK09064 313 ASLDAAG--IP-VM---PNPSHIVPVIVGDPEKCKKASDRLLEEHGIYVQPINYPTVPRGTERLRITPTPLHTDEMIDHL 386 (406)
T ss_pred HHHHHCC--CC-CC---CCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHH
T ss_conf 8677449--97-47---999987999959999999999999986898781088998899984699886866999999999
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999999852
Q gi|254780432|r 380 LERIERTAIKLS 391 (392)
Q Consensus 380 i~~l~~al~~L~ 391 (392)
++.|+++.+++-
T Consensus 387 ~~~L~ev~~~~g 398 (406)
T PRK09064 387 VEALVEVWARLG 398 (406)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999809
No 96
>PRK07179 hypothetical protein; Provisional
Probab=99.95 E-value=7.5e-27 Score=196.03 Aligned_cols=323 Identities=17% Similarity=0.223 Sum_probs=226.3
Q ss_pred CCCCEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCCCCC---CCC--CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
Q ss_conf 79976464102267435787-89999999999997314506---875--7818999998652010133312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLWHVS---NLY--QSTQQEIFANHLIHSTFADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~~~~---~~~--~~~~~~~la~~L~~~~~~~~v~f~~SGseA~ 102 (392)
.+|+++|+|.|+ .-||- +||+|++|..+++++..... ..+ .+....+|+++|.+..+.+.+.+++||..||
T Consensus 51 ~~G~~~i~fsSN---dYLGLs~hp~v~~a~~~ai~~~G~g~~~Srl~~G~~~~h~~LE~~LA~~~g~e~allf~SGy~AN 127 (408)
T PRK07179 51 TPGPDAIILQSN---DYLNLSGHPDIIKAQIAALQEYGDGLVMSAVFLHDDSPKPQFEKKLAAFTGFESGLLCQSGWAAN 127 (408)
T ss_pred CCCCCEEEEECC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHH
T ss_conf 899735685766---63478899999999999999849998746803167589999999999986899299987538999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC-CCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123-32222
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISND-TAAIL 181 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~-iAavi 181 (392)
-..+..- .++..+|-.+.--|-.-...+.+++ ..+...++||+++|++.+... -.-|+
T Consensus 128 ~g~i~aL---------~~~~d~I~~D~~~HaSi~dG~rls~------------a~~~~f~HND~~~Le~~L~~~~~~iIv 186 (408)
T PRK07179 128 VGLLQTI---------ADPNTPVYIDFFAHMSLWEGVRAAG------------AQAHPFRHNDVDHLRRQIERHGPGIIV 186 (408)
T ss_pred HHHHHHH---------CCCCCEEEEECCCCHHHHHHHHHCC------------CCEEEECCCCHHHHHHHHHHCCCCEEE
T ss_conf 9999996---------7999889998877888987676148------------857994799999999999846997799
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC---CCCCCCCCCCCCC--CCCEE--ECCCCCCC-CCCC
Q ss_conf 333222211246210123221102234572131011003444---4555310111245--45302--10344444-4344
Q gi|254780432|r 182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG---RTGKLFAYEWANV--KPDIM--TIAKGMGG-GFPI 253 (392)
Q Consensus 182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G---RtG~~f~~e~~gi--~PDi~--~~gK~l~g-G~P~ 253 (392)
+|.|.++.|.+.| |+.+.++|++||++|++||-- |+| .+|.= ..+++|+ .+||+ ++||++|+ |
T Consensus 187 ~egVfSMdGDiap----L~~l~~la~~y~a~L~VDEAH-~~Gv~G~~G~G-~~~~~gl~~~vdi~~gTlsKA~G~~G--- 257 (408)
T PRK07179 187 VDSVYSTTGTIAP----LVDIVDIAEEFGCVLVVDESH-SLGTHGPQGAG-LVAELGLTSRVHFITASLAKAFAGRA--- 257 (408)
T ss_pred EEECCCCCCCCCC----HHHHHHHHHHHCEEEEEECCC-EEEEECCCCCC-HHHHCCCCCCCEEEEEEHHHHHHHCC---
T ss_conf 9742357887668----999999998726798861435-05236799987-79984998787289937178676376---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHCC-CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEEC-CC
Q ss_conf 3210001112222233223453--21111001233455432012-22101121000026889999886797075504-64
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTY--GGNVLAMVLGEKVLNIIQSD-GFLENVINIAKILFEGLTAIKNRFPNMFLEVR-GQ 329 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~--~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vR-G~ 329 (392)
|.|++++++.+.+.....+..| +..|..++++.++|++++++ +..++.+++.++|+++|+++-- ++. ..
T Consensus 258 Gfi~gs~~~id~L~~~ar~~IfStal~P~~~aa~~aal~ii~~~~~~r~~L~~n~~~~r~~L~~~G~-------~i~~s~ 330 (408)
T PRK07179 258 GIITCPAELAEYFPFVSYPAIFSSTLLPHEIAGLEATLEVIESADERRARLHANARFLREGLSELGY-------NIRSSE 330 (408)
T ss_pred CCEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC-------CCCCCC
T ss_conf 6342379999999971877455666789999999999999862999999999999999999983799-------978999
Q ss_pred EEEEEEEECCC--HHHHHHHHHHCCEEEE-------ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 00999872499--8999999996898996-------26898899558986889999999999999999852
Q gi|254780432|r 330 GLLIGLKTVFS--PALLAAKFRDECLLTA-------PSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 330 Gl~~~ie~~~~--~~~~~~~l~~~Gll~~-------~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
.-+..+.+..+ ...+.+.|+++|+++. |.+..+||++..-..|++|||+++++|+++-+++.
T Consensus 331 spIvpi~~G~~~~a~~~~~~L~~~Gi~v~~i~~PtVP~g~~rlRislsA~ht~~dId~ll~~l~~~~~e~~ 401 (408)
T PRK07179 331 SQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRALIRLSLNADLTKSDLDRVLEVCREARDEVD 401 (408)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 99799985999999999999997896284167998999981699874877999999999999999999809
No 97
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase; InterPro: IPR010961 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents 5-aminoaevulinic acid (ALA) synthase (2.3.1.37 from EC), which catalyses the first stage of tetrapyrrole biosynthesis by the C4 pathway, namely the condensation of succinyl CoA and glycine. ALA synthase is a pyridoxal-phosphate-dependent enzyme. During catalysis, glycine initially binds to the enzyme cofactor, and after condensation with succinyl CoA, CoA, carbon dioxide and 5-aminolevulinic acid are produced .; GO: 0003870 5-aminolevulinate synthase activity, 0030170 pyridoxal phosphate binding, 0033014 tetrapyrrole biosynthetic process.
Probab=99.94 E-value=3.7e-26 Score=191.47 Aligned_cols=334 Identities=18% Similarity=0.191 Sum_probs=224.0
Q ss_pred EEEECCCE----EEECCC-CEEEECHHHHHHHCCCCC-CHHHHHHHHHHHHHCCCCC-----CCCCCHHHHHHHHHHHHH
Q ss_conf 98501037----996799-764641022674357878-9999999999997314506-----875781899999865201
Q gi|254780432|r 18 FEKGKGAW----LFSENG-IPFLDFASGIAVNSLGHS-HPELVAILKSQSEKLWHVS-----NLYQSTQQEIFANHLIHS 86 (392)
Q Consensus 18 i~~a~G~~----i~d~dG-~~yiD~~~g~~~~~lGh~-~p~i~~a~~~q~~~~~~~~-----~~~~~~~~~~la~~L~~~ 86 (392)
++|-+|.+ -.+.|| ++=+=.+|+ +=-||.+ ||+|++||++.+++..-.. -..++....+|+++|++.
T Consensus 26 l~R~ag~FP~A~~~~~~g~~~dVtVWCS--NDYLGMgqHp~Vl~Am~~~~~~~GaGaGGTRNIsGtn~~~v~LEaELAdL 103 (427)
T TIGR01821 26 LERLAGEFPFAQWHSPDGVKKDVTVWCS--NDYLGMGQHPKVLQAMHEALDKVGAGAGGTRNISGTNIYHVELEAELADL 103 (427)
T ss_pred HHHHHCCCCCCEEECCCCCCEEEEEEEC--CCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 3635178985134265778101788721--21320488654798899999963889987536566777899999999755
Q ss_pred CCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 013331235655540356777-66543200134786002343546-5654321234553211347999864333222100
Q gi|254780432|r 87 TFADRVFFTNSGAESVECAIK-TARRYHYMAGKTNKFRIVTFEGA-FHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFC 164 (392)
Q Consensus 87 ~~~~~v~f~~SGseA~e~Aik-lar~~~~~~g~t~r~~ii~~~~~-yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~ 164 (392)
.+.+-++..+||--||+++|- |+... |+ ++-|+.+ =| + .++-|-.+ .-.++ .-..+|
T Consensus 104 H~KE~ALvFtSgyVaNda~L~tL~k~~------P~---~~ifSD~LNH----A-SMI~GIr~---S~~~k----~iFrHN 162 (427)
T TIGR01821 104 HGKESALVFTSGYVANDATLATLAKII------PG---CVIFSDELNH----A-SMIEGIRR---SGAEK----FIFRHN 162 (427)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHC------CC---EEEEECCCCH----H-HHHHHHHH---CCCCE----EEEECC
T ss_conf 173113567788999999999999870------88---5898365563----5-69999874---78950----563059
Q ss_pred HHHHHHHHCC-CCCC---CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCC-CCCCCCCCCCC--CCCC---
Q ss_conf 2688754101-2332---22233322221124621012322110223457213101100-34444555310--1112---
Q gi|254780432|r 165 DLQSLKNQIS-NDTA---AILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQ-TGYGRTGKLFA--YEWA--- 234 (392)
Q Consensus 165 d~~~l~~~~~-~~iA---avi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~-tG~GRtG~~f~--~e~~--- 234 (392)
|+.+|++.+. .+++ -|-+|.|.++.|.+-| ++++.++++|||+|.-+|||= .|+ .|.--| .|+.
T Consensus 163 D~~hLe~LL~~~d~~~PKiIAFESvYSMDGd~aP----i~eiCDlA~kYGALTy~DEVHAVGl--YGprGgGIaErddfe 236 (427)
T TIGR01821 163 DVAHLEKLLQSVDPNAPKIIAFESVYSMDGDIAP----IKEICDLADKYGALTYLDEVHAVGL--YGPRGGGIAERDDFE 236 (427)
T ss_pred CHHHHHHHHHHCCCCCCCEEEEEEHCCCCCCCCC----HHHHHHHHHHHCCCCEECCEEEECC--CCCCCCCCCHHHHCC
T ss_conf 9789999986477998956886100016787266----7889668887188630011465336--588888512022110
Q ss_pred -----C--------------C--CCCEE--ECCCCCC--CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCHHHHHH
Q ss_conf -----4--------------5--45302--1034444--443443210001112222233223--453211110012334
Q gi|254780432|r 235 -----N--------------V--KPDIM--TIAKGMG--GGFPIGACLATNEVAACMNQGSHG--STYGGNVLAMVLGEK 287 (392)
Q Consensus 235 -----g--------------i--~PDi~--~~gK~l~--gG~P~sav~~~~~i~~~~~~~~~~--~T~~gnpl~~aaa~a 287 (392)
| + +=||+ ||||+.| ||| |.++.+++|.+....-| +|.+--|.-||+|++
T Consensus 237 shrasGiatPktndkGGakt~mhriDii~GTLaKAFG~~GGY----Ia~~~~L~D~~RS~ApGFIFTTsLPP~~~aGA~a 312 (427)
T TIGR01821 237 SHRASGIATPKTNDKGGAKTLMHRIDIIEGTLAKAFGVVGGY----IAASRKLIDAVRSYAPGFIFTTSLPPAIAAGALA 312 (427)
T ss_pred HHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCCCCE----EECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 000157677765766652001110000016511223444530----2055221320000378421242155899999999
Q ss_pred HHHHHHCC--C-CCCHHHHHCCHHHHHHHHHHH---HCCCEEEEECCCEEEEEEEECCCHHHHHHHHH-HCCEEE-----
Q ss_conf 55432012--2-210112100002688999988---67970755046400999872499899999999-689899-----
Q gi|254780432|r 288 VLNIIQSD--G-FLENVINIAKILFEGLTAIKN---RFPNMFLEVRGQGLLIGLKTVFSPALLAAKFR-DECLLT----- 355 (392)
Q Consensus 288 ~L~~l~~~--~-l~~~~~~~g~~l~~~L~~l~~---~~~~~v~~vRG~Gl~~~ie~~~~~~~~~~~l~-~~Gll~----- 355 (392)
++++++++ . +..+=++.-+++++.|+++-- .+|+-|..| ++| ...-++.+...|+ +.||++
T Consensus 313 sIRhLK~~eg~~lR~~hQ~~~~~lK~~L~~~GlPv~~~pSHIvPv-----~iG--dA~~~k~~SD~LL~~hGIYVQpINy 385 (427)
T TIGR01821 313 SIRHLKESEGQDLRRAHQERVKRLKKLLEALGLPVIDNPSHIVPV-----IIG--DAAKCKKVSDLLLNKHGIYVQPINY 385 (427)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE-----EEC--CHHHHHHHHHHHHHHCCCEEECCCC
T ss_conf 999975137677899998999999999995777754887738876-----766--8688989989888717815712688
Q ss_pred --EECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf --626898899558986889999999999999999852
Q gi|254780432|r 356 --APSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 356 --~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
.|.|.+++||.|+=.-|+++||.++++|..+..+|.
T Consensus 386 PTVpRG~ERLRitPtP~H~~~~id~Lv~AL~~~w~~l~ 423 (427)
T TIGR01821 386 PTVPRGTERLRITPTPVHTDKLIDDLVEALLLVWDRLG 423 (427)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 88988750244268889887789999999999988613
No 98
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.93 E-value=5.2e-25 Score=184.00 Aligned_cols=330 Identities=18% Similarity=0.195 Sum_probs=223.7
Q ss_pred EEEEECCCEEEECCCCEEEECHHHHHHHCCCCC-CHHHHHHHHHHHHHCCCC--CC---CCCCHHHHHHHHHHHHHCCCC
Q ss_conf 898501037996799764641022674357878-999999999999731450--68---757818999998652010133
Q gi|254780432|r 17 RFEKGKGAWLFSENGIPFLDFASGIAVNSLGHS-HPELVAILKSQSEKLWHV--SN---LYQSTQQEIFANHLIHSTFAD 90 (392)
Q Consensus 17 ~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~-~p~i~~a~~~q~~~~~~~--~~---~~~~~~~~~la~~L~~~~~~~ 90 (392)
.+.+..+.+++ .+|++++||+|+ .-||-+ ||++++|+.+.+++.... .. ...++...+|+++|++..+.+
T Consensus 25 ~~~~~~~~~~~-~~~~~~~nf~SN---dYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e 100 (388)
T COG0156 25 ALDRRQGLAIR-ADGRKVLNFCSN---DYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAE 100 (388)
T ss_pred HCCCCCCCCEE-CCCCEEEEEECC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 02445775332-178406764437---74352688789999999999819998976704478289999999999984998
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 31235655540356777665432001347860023435465654321234553211347999864333222100268875
Q gi|254780432|r 91 RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLK 170 (392)
Q Consensus 91 ~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~ 170 (392)
.++..+||-.||.+.+-.- .++..+|-.+.--|=.-.....+++ ..+....+||+++|+
T Consensus 101 ~al~f~SGy~AN~~~i~~l---------~~~~dli~~D~lnHASiidG~rls~------------a~~~~f~HnD~~~Le 159 (388)
T COG0156 101 AALLFSSGFVANLGLLSAL---------LKKGDLIFSDELNHASIIDGIRLSR------------AEVRRFKHNDLDHLE 159 (388)
T ss_pred CEEEECCCCHHHHHHHHHH---------CCCCCEEEEECHHHHHHHHHHHHCC------------CCEEEECCCCHHHHH
T ss_conf 4899715311177788885---------6888689980102053998898578------------838982689999999
Q ss_pred HHCCC------CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCC-CC-CCCCCCCCCCCCCCCCCC---
Q ss_conf 41012------33222233322221124621012322110223457213101100-34-444555310111245453---
Q gi|254780432|r 171 NQISN------DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQ-TG-YGRTGKLFAYEWANVKPD--- 239 (392)
Q Consensus 171 ~~~~~------~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~-tG-~GRtG~~f~~e~~gi~PD--- 239 (392)
+.+.. +-.-|++|.|.++.|++.| |+.|.++|++|+++|++||.- +| +|.+|.= ..|++|+.|+
T Consensus 160 ~~l~~~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG-~~e~~g~~~~~vd 234 (388)
T COG0156 160 ALLEEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHAVGVLGPNGRG-LAEHFGLEPEEVD 234 (388)
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCCC----HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC-HHHHHCCCCCCCE
T ss_conf 998762224787549998234218998577----89999999983958999852010243799861-7887388876514
Q ss_pred EE--ECCCCCCC--CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCHHHHHCCHHHHHH
Q ss_conf 02--10344444--43443210001112222233--22345321111001233455432012-22101121000026889
Q gi|254780432|r 240 IM--TIAKGMGG--GFPIGACLATNEVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQSD-GFLENVINIAKILFEGL 312 (392)
Q Consensus 240 i~--~~gK~l~g--G~P~sav~~~~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L 312 (392)
|+ |+||+||+ || +.+++.+.+.+... .+..|.+-.|..++++.++|+++++. +..++.+.+..+++..+
T Consensus 235 i~~gTlsKAlGs~Gg~----v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~ 310 (388)
T COG0156 235 IIVGTLGKALGSSGGY----IAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLL 310 (388)
T ss_pred EEEEECHHHHCCCCCE----EECCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_conf 9998750543226844----657599999999718652214778978899999999998758788999999999999888
Q ss_pred HHHHHHCCCEEEEECCCEEEEEEEECC--CHHHHHHHHHHCCEEEE-------ECCCCEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 999886797075504640099987249--98999999996898996-------268988995589868899999999999
Q gi|254780432|r 313 TAIKNRFPNMFLEVRGQGLLIGLKTVF--SPALLAAKFRDECLLTA-------PSSDNVVRILPPLTITAEEIHEGLERI 383 (392)
Q Consensus 313 ~~l~~~~~~~v~~vRG~Gl~~~ie~~~--~~~~~~~~l~~~Gll~~-------~~~~~~irl~Ppl~it~~eid~~i~~l 383 (392)
+...-...+..+ -+.-+.+.. ....+...++++|+++. |.+..+||++|....|++||+.+++.|
T Consensus 311 ~~~~~~~~~s~s------~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l 384 (388)
T COG0156 311 KALGLVLLPSES------PIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEAL 384 (388)
T ss_pred HHCCCCCCCCCC------CEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 852976578889------86616968889999999999977925712368998999650898716779999999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780432|r 384 ERT 386 (392)
Q Consensus 384 ~~a 386 (392)
.+.
T Consensus 385 ~~~ 387 (388)
T COG0156 385 SEV 387 (388)
T ss_pred HHH
T ss_conf 852
No 99
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative; InterPro: IPR010962 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry contains a number of enzyme families: Serine palmitoyltransferase Glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase) 5-aminolevulinic acid synthase 8-amino-7-oxononanoate synthase All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.; GO: 0016740 transferase activity, 0030170 pyridoxal phosphate binding.
Probab=99.92 E-value=9.9e-24 Score=175.62 Aligned_cols=333 Identities=17% Similarity=0.243 Sum_probs=237.9
Q ss_pred CCCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCC-CHHHHHHHHHHHHHCCCCCCC-----CCCHHHHHHHHHHHHH
Q ss_conf 8874898501037996799764641022674357878-999999999999731450687-----5781899999865201
Q gi|254780432|r 13 QSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHS-HPELVAILKSQSEKLWHVSNL-----YQSTQQEIFANHLIHS 86 (392)
Q Consensus 13 ~~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~-~p~i~~a~~~q~~~~~~~~~~-----~~~~~~~~la~~L~~~ 86 (392)
..|-+++.+.|.++. .|||+||.++| ++-||-. ||++++|.++++++..-.... .+-....+|+|+|++-
T Consensus 15 ~~i~~L~s~qGp~v~-vnG~~vinLsS---NNYLGlA~hp~Lk~aA~~a~~~yGvGAGAVRTIaGTl~lH~eLE~~LA~F 90 (392)
T TIGR01825 15 VEIRVLESAQGPEVK-VNGKKVINLSS---NNYLGLASHPRLKEAAKEAIQQYGVGAGAVRTIAGTLELHEELEEKLAKF 90 (392)
T ss_pred CCCHHHCCCCCCEEE-ECCEEEEECCC---CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 440532078888789-88857874043---55455468876899999999865962241210433778999999998755
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC--CCCCCCC
Q ss_conf 01333123565554035677766543200134786-0023435465654321234553211347999-864--3332221
Q gi|254780432|r 87 TFADRVFFTNSGAESVECAIKTARRYHYMAGKTNK-FRIVTFEGAFHGRTLATISAGGKLQYLEGFG-PKI--EGFDQAK 162 (392)
Q Consensus 87 ~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r-~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~-p~~--~~~~~~~ 162 (392)
-.-+-+....||-.+|-.||--..+ .+- --|||- ..+|-+-.+ -++ ..-..+.
T Consensus 91 K~teAAl~fqSGF~~N~GvlSa~L~-------k~ddG~v~Sd----------------ELNHASIIDG~RLtkA~k~~y~ 147 (392)
T TIGR01825 91 KKTEAALVFQSGFNTNQGVLSALLR-------KGDDGIVLSD----------------ELNHASIIDGLRLTKAKKKIYK 147 (392)
T ss_pred CCCCEEEHHHCCHHHHHHHHHHHHC-------CCCCEEEEEC----------------CCCHHHHHHCCCCCCCCEEEEE
T ss_conf 3820110103122377999987623-------5887158720----------------0020345504223788568984
Q ss_pred CHHHHHHHHHC----CC---CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-C-CCC
Q ss_conf 00268875410----12---332222333222211246210123221102234572131011003444455531-0-111
Q gi|254780432|r 163 FCDLQSLKNQI----SN---DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-A-YEW 233 (392)
Q Consensus 163 ~~d~~~l~~~~----~~---~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~-~e~ 233 (392)
+-|.+.|++.+ .. +---+|.+-|.++.|.+.| |..|-|++++||++..+|+= -|-|=.|.-- | -+|
T Consensus 148 H~dm~DL~~~l~e~~~~Gqy~~~l~vTDGVFSMDGdvAp----Lp~iVE~Ae~Yda~~yVDDA-HGsGVlGe~GrGtV~H 222 (392)
T TIGR01825 148 HVDMDDLERVLRENVEEGQYKKKLIVTDGVFSMDGDVAP----LPEIVELAEKYDALVYVDDA-HGSGVLGEKGRGTVKH 222 (392)
T ss_pred CCCHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCC----CCHHHHHHHHCCCEEEEECC-CCCCCCCCCCCCEEEC
T ss_conf 598458999997160337544368996650425678788----73233463245957998633-4664447788713530
Q ss_pred CCCC-CC----EEECCCCCC--CCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCHHHHHHHHHHHHC-CCCCCHHH
Q ss_conf 2454-53----021034444--4434432100011122222332---234532111100123345543201-22210112
Q gi|254780432|r 234 ANVK-PD----IMTIAKGMG--GGFPIGACLATNEVAACMNQGS---HGSTYGGNVLAMVLGEKVLNIIQS-DGFLENVI 302 (392)
Q Consensus 234 ~gi~-PD----i~~~gK~l~--gG~P~sav~~~~~i~~~~~~~~---~~~T~~gnpl~~aaa~a~L~~l~~-~~l~~~~~ 302 (392)
||+. -+ |=|+||++| ||| +++++++.|.+.... .+||-. +|-..+|..++++.+.+ +++.+|..
T Consensus 223 FGL~y~~v~~qvGTLSKA~GvvGGY----~AG~~~lidyL~~~aRPFLFSta~-~Pa~~~A~~~Av~~l~~~~~l~~kLW 297 (392)
T TIGR01825 223 FGLEYDKVDIQVGTLSKAIGVVGGY----VAGSKELIDYLKARARPFLFSTAL-PPAVVAALIEAVDVLQESPELMEKLW 297 (392)
T ss_pred CCCCCCCEEEEECCHHHHHCCCCCC----CCCCHHHHHHHHHCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 3754164678855522322256642----348889999998628986012578-80789999999998707931477767
Q ss_pred HHCCHHHHHHHHHH-----HHCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHC-CEEE-------EECCCCEEEECCCC
Q ss_conf 10000268899998-----86797075504640099987249989999999968-9899-------62689889955898
Q gi|254780432|r 303 NIAKILFEGLTAIK-----NRFPNMFLEVRGQGLLIGLKTVFSPALLAAKFRDE-CLLT-------APSSDNVVRILPPL 369 (392)
Q Consensus 303 ~~g~~l~~~L~~l~-----~~~~~~v~~vRG~Gl~~~ie~~~~~~~~~~~l~~~-Gll~-------~~~~~~~irl~Ppl 369 (392)
...++|+++|.+|- .++| |..| |++=| ....++.++|+++ ||++ .|.+.-+||..|.-
T Consensus 298 ~Nt~ylk~~L~~LGydl~~S~tP--ItPv-----~~Gde--~~A~efS~rL~~~yGvFa~sivFPTVp~g~ARiR~~~tA 368 (392)
T TIGR01825 298 DNTRYLKAGLSKLGYDLGESETP--ITPV-----LIGDE--KVAQEFSRRLLDEYGVFAQSIVFPTVPRGTARIRNIPTA 368 (392)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCC--CCCE-----EECCC--HHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCH
T ss_conf 88999998767616411476686--1245-----87651--568999998777529089984216566988421246561
Q ss_pred CCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 6889999999999999999852
Q gi|254780432|r 370 TITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 370 ~it~~eid~~i~~l~~al~~L~ 391 (392)
-.|.++||+++++++++-+++.
T Consensus 369 ~HTkd~L~~al~aye~~Gk~l~ 390 (392)
T TIGR01825 369 EHTKDDLDQALDAYEKVGKELG 390 (392)
T ss_pred HCCHHHHHHHHHHHHHHHHHHC
T ss_conf 3026679999999998678725
No 100
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.91 E-value=2.9e-23 Score=172.53 Aligned_cols=318 Identities=16% Similarity=0.172 Sum_probs=207.9
Q ss_pred CCCEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCCC---------C-CCC--CCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 9976464102267435787-899999999999973145---------0-687--57818999998652010133312356
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLWH---------V-SNL--YQSTQQEIFANHLIHSTFADRVFFTN 96 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~~---------~-~~~--~~~~~~~~la~~L~~~~~~~~v~f~~ 96 (392)
.++.-|||.|+ .-||- +||++++|+.+++++... . +.. ..+....+|+++|.+..+.+.+.+.+
T Consensus 2 ~~~~~lnFsSN---DYLGLs~~p~v~~a~~~a~~~y~~~~~~~g~Gs~gSrl~~G~~~~h~~LE~~lA~f~g~e~allf~ 78 (370)
T PRK05937 2 KSSLSIDFVTN---DFLGFSRSTTLVHEVEKRYRLYCEQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVP 78 (370)
T ss_pred CCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 97707824032---003878998999999999998731257898768687826278699999999999986999399987
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC-
Q ss_conf 5554035677766543200134786002343546565432123455321134799986433322210026887541012-
Q gi|254780432|r 97 SGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISN- 175 (392)
Q Consensus 97 SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~- 175 (392)
||..||-..+... .++..+|-.+.--|-.-...+.+++- .+...++||+++|++.+..
T Consensus 79 sGy~AN~~~i~al---------~~~~d~i~~D~l~HaSi~dG~rls~a------------~~~~f~Hnd~~~Le~~L~~~ 137 (370)
T PRK05937 79 SGYMANLGLCAHL---------SSVTDYVLWDEQVHISVVYSLSVISG------------KHQSFRHNDLDHLESLLESC 137 (370)
T ss_pred CHHHHHHHHHHHC---------CCCCCEEEEECCCHHHHHHHHHHCCC------------CEEEECCCCHHHHHHHHHHH
T ss_conf 6688999999960---------89999899963061999999986499------------86996899989999999853
Q ss_pred -----CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCC---CCCCCCCCCCCCCCCC--C-EEECC
Q ss_conf -----33222233322221124621012322110223457213101100344---4455531011124545--3-02103
Q gi|254780432|r 176 -----DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGY---GRTGKLFAYEWANVKP--D-IMTIA 244 (392)
Q Consensus 176 -----~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~---GRtG~~f~~e~~gi~P--D-i~~~g 244 (392)
+-.-|++|.|.++.|.+.| |+.+.++|++|+.+||+||.- || |.+|+= ..+++|+.. + +.|+|
T Consensus 138 ~~~~~~~~~iv~egVfSMdGdiap----L~~l~~l~~~y~a~l~vDeAH-~~Gv~G~~GrG-~~e~~g~~~~~~i~~Tls 211 (370)
T PRK05937 138 RAVSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAH-AMGIFGDDGKG-FCHSLGYENFYAVLVTYS 211 (370)
T ss_pred HHCCCCCEEEEEECCCCCCCCCCC----HHHHHHHHHHCCCEEEEECCH-HCCCCCCCCCC-HHHHCCCCCCCEEEEEHH
T ss_conf 311788559999405667787558----999999999819789973300-00433799975-788739988778981325
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHCCC-C-CCHHHHHCCHHHHHHHHHHHHC
Q ss_conf 44444-434432100011122222332--23453211110012334554320122-2-1011210000268899998867
Q gi|254780432|r 245 KGMGG-GFPIGACLATNEVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQSDG-F-LENVINIAKILFEGLTAIKNRF 319 (392)
Q Consensus 245 K~l~g-G~P~sav~~~~~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~~~~-l-~~~~~~~g~~l~~~L~~l~~~~ 319 (392)
|++|+ | +.+++++++.+.+.... +.+|-+-.|..++++.+.++++.++. . .++..++-++|++.+. ...
T Consensus 212 KAlGs~G---gfv~~s~~~i~~l~~~ar~~IfStalpP~~~aa~~~al~~l~~e~~~~r~~l~~~~~~~~~~~~---~~~ 285 (370)
T PRK05937 212 KALGSMG---AALLSSSEVKQDLMLNSPPLRYSTGLPPHALISIQVAYDFLSQEGELARKQLFRLKEYFAQKFS---SAA 285 (370)
T ss_pred HHHHHCC---EEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC---CCC
T ss_conf 6621065---3898288999999983964003675589999999999999985959999999999999998506---678
Q ss_pred CCEEEEECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECC---CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9707550464009998724998999999996898996268---98899558986889999999999999999852
Q gi|254780432|r 320 PNMFLEVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSS---DNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 320 ~~~v~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~---~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+..+..+ + +. ......+.+.|+++|+++.+.. -..||+...-.-|++|||++++.|.++..+..
T Consensus 286 ~~~i~pI-----~--~~-~~~~~~~~~~L~~~Gi~v~~Ir~PtVPrLRi~l~A~HT~edId~Lv~~L~~~~~~~~ 352 (370)
T PRK05937 286 PGCVQPI-----F--LP-DISEQELYSKLVETGIRVGVVCFPTKPFLRVNLHAFNTEDEVDILVSVLHSYLEKCQ 352 (370)
T ss_pred CCCEEEE-----E--EC-CHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9974889-----8--08-389999999999789779868989988378861866699999999999999999986
No 101
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase; InterPro: IPR011282 This entry represents a narrowly defined clade of animal and bacterial (almost exclusively proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homologue from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.; GO: 0008890 glycine C-acetyltransferase activity.
Probab=99.91 E-value=3e-23 Score=172.48 Aligned_cols=332 Identities=19% Similarity=0.251 Sum_probs=236.5
Q ss_pred CCCEEEEEECCCEEEECCC--CEEEECHHHHHHHCCCCC-CHHHHHHHHHHHHHCCCCCC--C---CCCHHHHHHHHHHH
Q ss_conf 8874898501037996799--764641022674357878-99999999999973145068--7---57818999998652
Q gi|254780432|r 13 QSDIRFEKGKGAWLFSENG--IPFLDFASGIAVNSLGHS-HPELVAILKSQSEKLWHVSN--L---YQSTQQEIFANHLI 84 (392)
Q Consensus 13 ~~p~~i~~a~G~~i~d~dG--~~yiD~~~g~~~~~lGh~-~p~i~~a~~~q~~~~~~~~~--~---~~~~~~~~la~~L~ 84 (392)
+.--+|.+.+++.|.-.|| ++.|.|+.+ +-||=+ ||+|++|.+++|++..+... + .+-....+|+++|.
T Consensus 19 K~ERiI~s~Q~a~irv~dGv~~~vlNfCAN---NYLGLs~HP~~I~AA~~Al~~~GfGlsSVRFICGTQd~HK~LE~~iA 95 (395)
T TIGR01822 19 KSERIITSPQGADIRVADGVSREVLNFCAN---NYLGLSDHPDVIQAAKDALDEHGFGLSSVRFICGTQDLHKELEAKIA 95 (395)
T ss_pred EECCEEECCCCCCEEEECCCCCCHHHHHHH---CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHH
T ss_conf 002067237987058855864231443100---00564675579999999887438951343212167435689999999
Q ss_pred HHCCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCC--CCC
Q ss_conf 010133-31235655540356777665432001347860023435465654321234553211347999-86433--322
Q gi|254780432|r 85 HSTFAD-RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFG-PKIEG--FDQ 160 (392)
Q Consensus 85 ~~~~~~-~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~-p~~~~--~~~ 160 (392)
+-.+.+ -++| .|--+||---- -... +..+-|| |+..+|-+-.+ -++.. --.
T Consensus 96 ~F~~~EDtILY-~scFDANgGlF------E~LL--g~eDAii----------------SDaLNHASIIDGvRLCKAkrYR 150 (395)
T TIGR01822 96 AFLGTEDTILY-ASCFDANGGLF------ETLL--GEEDAII----------------SDALNHASIIDGVRLCKAKRYR 150 (395)
T ss_pred HHHCCCCHHHH-HHHHHCCCCCC------HHHC--CCCCCCH----------------HHHHCCCHHHHHHHHHHHHHHH
T ss_conf 97165304454-56663055422------0104--7544221----------------0222431023003542233432
Q ss_pred CCCHHHHHHHHHCCC------CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC-CCCC-CCCCCCCCCC
Q ss_conf 210026887541012------3322223332222112462101232211022345721310110-0344-4455531011
Q gi|254780432|r 161 AKFCDLQSLKNQISN------DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV-QTGY-GRTGKLFAYE 232 (392)
Q Consensus 161 ~~~~d~~~l~~~~~~------~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV-~tG~-GRtG~~f~~e 232 (392)
...+|++.|+..+.+ +.--|..+-|.++.|.+.+ |++++.||++||+|+.+||. .||| |-||+= ..|
T Consensus 151 Y~~~dm~dLe~~L~~A~~~Gar~~Li~tDGvFSMDG~iA~----L~~i~~LA~~Y~ALv~~DecHA~GflG~~GRG-~~E 225 (395)
T TIGR01822 151 YANNDMADLEAQLKEAQAAGARHRLIATDGVFSMDGTIAP----LDEICDLADKYDALVMVDECHATGFLGATGRG-TAE 225 (395)
T ss_pred HHCCCHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCEEC----HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC-HHH
T ss_conf 3058888999999999973895899864660206873107----67899999855987887443342332789986-142
Q ss_pred CCCC--CCCEE--ECCCCCCC---CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHCC-CCCCHHH
Q ss_conf 1245--45302--10344444---434432100011122222332--2345321111001233455432012-2210112
Q gi|254780432|r 233 WANV--KPDIM--TIAKGMGG---GFPIGACLATNEVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQSD-GFLENVI 302 (392)
Q Consensus 233 ~~gi--~PDi~--~~gK~l~g---G~P~sav~~~~~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~ 302 (392)
..|+ +=||+ |+||+||| || +.+++||.+.+.+.+ |=...+-.|...+|+.++|++++.. +|.++..
T Consensus 226 ~~gv~g~vdI~tgTLGKAlGGA~GGf----Tta~~evv~lLRQRsRPYLFSNslpP~vvga~~~vl~~l~~s~~l~~~L~ 301 (395)
T TIGR01822 226 LLGVMGRVDIITGTLGKALGGASGGF----TTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLDMLEGSNELRDRLA 301 (395)
T ss_pred HCCCCCCEEEEECCHHHHHCCCCCCC----CCCCHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_conf 13767525774054334511456764----37746799985312651100046306899999999999842057999999
Q ss_pred HHCCHHHHHHHHHHHHCCCEEEEECCC-----EEEEEEEECCCHHHHHHHHHHCCEEEE-------ECCCCEEEECCCCC
Q ss_conf 100002688999988679707550464-----009998724998999999996898996-------26898899558986
Q gi|254780432|r 303 NIAKILFEGLTAIKNRFPNMFLEVRGQ-----GLLIGLKTVFSPALLAAKFRDECLLTA-------PSSDNVVRILPPLT 370 (392)
Q Consensus 303 ~~g~~l~~~L~~l~~~~~~~v~~vRG~-----Gl~~~ie~~~~~~~~~~~l~~~Gll~~-------~~~~~~irl~Ppl~ 370 (392)
+.-++|+++|++.-- +|.+. -.|++ ...-...+++.|+++||++. |-|.-+||..-+-.
T Consensus 302 ~n~~~FR~~m~AaGF-------d~~p~~hpI~pvMly--DA~~Aq~~A~~Ll~~GiYv~GFfYPVVPKGqARIRvQ~SA~ 372 (395)
T TIGR01822 302 ENTRYFRERMEAAGF-------DVKPAEHPIIPVMLY--DAKLAQRFAERLLEEGIYVIGFFYPVVPKGQARIRVQISAV 372 (395)
T ss_pred HHHHHHHHHHHHCCC-------CCCCCCCCCEEEECC--CHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEEECCC
T ss_conf 999987875342474-------017898851023211--47899999999987792899745264378861244410256
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q ss_conf 88999999999999999985
Q gi|254780432|r 371 ITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 371 it~~eid~~i~~l~~al~~L 390 (392)
.++++||+++++|.++=.+|
T Consensus 373 H~~e~l~~a~~AF~~~G~~l 392 (395)
T TIGR01822 373 HTEEQLDRAVEAFTRVGREL 392 (395)
T ss_pred CCHHHHHHHHHHHHHHHHHH
T ss_conf 89889999999999987862
No 102
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.78 E-value=2.6e-17 Score=133.65 Aligned_cols=329 Identities=19% Similarity=0.237 Sum_probs=204.2
Q ss_pred EEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHHHHHHHHCCC--C-CCCCCCCCCCCHHHHHHH
Q ss_conf 6464102267435787899999999999973145068757818-99999865201013--3-312356555403567776
Q gi|254780432|r 33 PFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQ-QEIFANHLIHSTFA--D-RVFFTNSGAESVECAIKT 108 (392)
Q Consensus 33 ~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~-~~~la~~L~~~~~~--~-~v~f~~SGseA~e~Aikl 108 (392)
+.|++..| -..+|= .|+|++|+.++++...+ +.|..+. ..+|-+.+++..+. + .++.+++++||...+++.
T Consensus 23 diI~L~~~--e~~~~~-p~~v~~a~~~~~~~~~~--~~Y~~~~g~~~Lr~aia~~~~~~~~~ei~vt~G~~~~l~~~~~a 97 (375)
T PRK06225 23 ELIWLGQN--TNHLHP-HPEVRDAMIRAAKEGEY--NKYAPPEGFEELRELILADLGLDDDFDALVTAGATESLYLVIRA 97 (375)
T ss_pred CEEECCCC--CCCCCC-CHHHHHHHHHHHCCCCC--CCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHH
T ss_conf 90689999--899885-79999999999648987--88799635899999999986889997499827889999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHCCCCCCCCCC-CCCC
Q ss_conf 65432001347860023435465654321234553211347999864-333222100268875410123322223-3322
Q gi|254780432|r 109 ARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKI-EGFDQAKFCDLQSLKNQISNDTAAILI-EPIQ 186 (392)
Q Consensus 109 ar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~-~~~~~~~~~d~~~l~~~~~~~iAavi~-Epv~ 186 (392)
.- .+| ..||..+.+|.+-...+......... -|.. +... ...|.+++++.+.+++..+++ -|=
T Consensus 98 ~~-------~pG-D~vl~~~P~y~~y~~~~~~~g~~~~~----vpl~~~~~~--~~~d~d~l~~~i~~~tk~i~l~nPn- 162 (375)
T PRK06225 98 FL-------SPG-TNTVTSDPGYKIIDNFANRFGAEVIE----VPIYSEECD--YKLTPEALKENVDEETKLIVLIDPL- 162 (375)
T ss_pred HC-------CCC-CEEEECCCCCHHHHHHHHHCCCEEEE----CCCCCCCCC--CCCCHHHHHHHCCCCCCEEEECCCC-
T ss_conf 77-------998-98998489833599999984990574----576685468--8789999996288888289982998-
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC--E--EECCCCCC-CCCCCCCCCCCCC
Q ss_conf 22112462101232211022345721310110034444555310111245453--0--21034444-4434432100011
Q gi|254780432|r 187 GEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD--I--MTIAKGMG-GGFPIGACLATNE 261 (392)
Q Consensus 187 g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD--i--~~~gK~l~-gG~P~sav~~~~~ 261 (392)
.--|. ..+++.++++.++|++|++++|.||+...|.. +...... ..|| | -++||..+ .|+=+|.+++.++
T Consensus 163 NPTG~-v~s~~~l~~l~~~a~~~~i~ii~DE~Y~~f~~-~~~~~~~---~~~~~~iv~~S~SK~~~~~G~RiG~~i~~~~ 237 (375)
T PRK06225 163 NPLGS-SYTREEIKEFAEIARDNDAYLVHDCTYRDFAR-EHTLAAE---YAPEGTVTIYSFSKIFGLAGLRIGAVVAAPD 237 (375)
T ss_pred CCCCC-CCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCC-CCCCHHH---HCCCCEEEECCCCHHCCCHHHHHHHHCCCHH
T ss_conf 99888-78899999999999862770000221332067-8872345---3778759982360513573440514107999
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE-CCCEEEEEEEECC-
Q ss_conf 12222233223453211110012334554320122210112100002688999988679707550-4640099987249-
Q gi|254780432|r 262 VAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEV-RGQGLLIGLKTVF- 339 (392)
Q Consensus 262 i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v-RG~Gl~~~ie~~~- 339 (392)
+++.+.... .++++.|.++..+|.+.|+. .+++.++.++.-..-++.+.+..++.+++...+ ...|.++-+++..
T Consensus 238 ~i~~l~~~~-~~~~~~~~~~q~aa~aal~~--~~~~~~~~~~~~~~~r~~~~~~l~~l~g~~~~~~p~~g~f~~~~~~~~ 314 (375)
T PRK06225 238 LLEQVAKYV-VSDLGANVIAQEAAIAGLKV--KSEWIERIRREDFRNQALIKEAVDEIEGVFLPVYPSHANMLVIDTSEA 314 (375)
T ss_pred HHHHHHHHH-CCCCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCC
T ss_conf 999999874-38788789999999999848--999999999999999999999985373885167079745999986688
Q ss_pred --CHHHHHHHHHHCCEEEEEC-------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf --9899999999689899626-------898899558986889999999999999999852
Q gi|254780432|r 340 --SPALLAAKFRDECLLTAPS-------SDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 340 --~~~~~~~~l~~~Gll~~~~-------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
++..+.+.++++|+++.+. |++.||++ +..++++|++++++|++++.+|-
T Consensus 315 g~~~~~~~~~l~e~gV~v~pG~~~~~~~g~~~iRis--~~~~~e~l~~a~~rl~~~l~~lr 373 (375)
T PRK06225 315 GIRPEDLVEYLLERKIFVRQGTYTSKRFGDRFIRVS--FSIPREWVERFCEEFPDVVATLR 373 (375)
T ss_pred CCCHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHHH
T ss_conf 989999999999789099689867887899929999--70489999999999999999864
No 103
>PRK07212 consensus
Probab=99.77 E-value=6.9e-17 Score=130.87 Aligned_cols=330 Identities=17% Similarity=0.202 Sum_probs=199.0
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731--450687578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL--WHVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~--~~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
.+|++.|++..|.- .+. -.|.|++|+.+.++.. .++......+.+..+++.+.+..+ .+.++.++++++|.
T Consensus 28 ~~G~dvi~l~~g~p--df~-~p~~i~ea~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~v~p~~I~vt~G~~~al 104 (378)
T PRK07212 28 AEGVDVISLSVGEP--DFD-TPKHICDAAIDAMDRGKTHYAPSNGIPELREAIAEKLRTENHIDVTPDDVIVTPGAKQAI 104 (378)
T ss_pred HCCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEECCHHHHH
T ss_conf 66998379989889--999-889999999999857999889999999999999999999848998733199947899999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++.-- .+| +.|+..+.+|.+....+........ .- |..+. . +...+.+++.+.+++.++++
T Consensus 105 ~~~~~~l~-------~pG-D~Vlv~~P~Y~~y~~~~~~~g~~~v-~v---pl~~~--~--~~~~~~l~~~i~~~~k~i~l 168 (378)
T PRK07212 105 YEAMMAVL-------DDG-DEVILLDPAWVSYEACIKFAGGKPV-WV---PLNPE--D--FQLPDDLAEAITDKTKLIVV 168 (378)
T ss_pred HHHHHHHC-------CCC-CEEEEECCCCCCHHHHHHHCCCEEE-EE---ECCCC--C--CCCHHHHHHHCCCCCEEEEE
T ss_conf 99999847-------998-9899817963425689997199699-98---35556--7--85289999856657829998
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-E---EECCCCCC-CCCCCCCC
Q ss_conf -332222112462101232211022345721310110034444555310111245453-0---21034444-44344321
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD-I---MTIAKGMG-GGFPIGAC 256 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD-i---~~~gK~l~-gG~P~sav 256 (392)
-| +.-.|. ..+++.+++|.++|++||+++|.||+...+---++........-.+| . -.+||.++ .|+-+|.+
T Consensus 169 ~~P-~NPtG~-v~s~~~l~~l~~la~~~~~~ii~DEiY~~l~~~~~~~~~~~l~~~~~~~i~~~S~SK~~~l~GlRvG~~ 246 (378)
T PRK07212 169 NSP-SNPTGA-VFGKESLQGVADLAVDHDLYVLSDEIYEKIIYGKEHISLGSLDGMADRTITINGFSKAYAMTGWRLGYL 246 (378)
T ss_pred CCC-CCCCCC-CCCCHHHHHHHHHHHHHCCEECCCCCHHHHHCCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCEEEEEE
T ss_conf 899-799898-847176889999777424501330011544048877774334454555403335421367776048989
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEE-E
Q ss_conf 00011122222332234532111100123345543201--22210112100002688999988679707550464009-9
Q gi|254780432|r 257 LATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLL-I 333 (392)
Q Consensus 257 ~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~-~ 333 (392)
++.+++++.+.......+...+.++..++.+.++..++ +.+.++.++.-+.+.+.|+++ ++ .-....|.+ .
T Consensus 247 ~~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~l~~~~~~~~~~r~~l~~~L~~~-----g~-~~~~p~g~~~~ 320 (378)
T PRK07212 247 TAPEEIIKQMGKVQSHSVSSATTFVQYGGVAALKGPQDCVEEMRDEFEARRDILIDGLADM-----GL-ECAPPDGAFYA 320 (378)
T ss_pred ECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-----CC-EECCCCEEEEE
T ss_conf 7399999999999864557887699999999996877889999999999999999999976-----98-66268816999
Q ss_pred EEEECCCHHHHHHHH-HHCCEEEEEC----CCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 987249989999999-9689899626----89889955898688999999999999999
Q gi|254780432|r 334 GLKTVFSPALLAAKF-RDECLLTAPS----SDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 334 ~ie~~~~~~~~~~~l-~~~Gll~~~~----~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
=+++..+...++.++ .+.||.+.|. .++.+|+. +..++++|++++++|+++|
T Consensus 321 ~~~~~~~~~~~~~~ll~~~gV~v~pG~~Fg~~g~iRl~--~a~~~e~l~eal~RL~~~L 377 (378)
T PRK07212 321 FPNVDGDDTAVAERLLKDAHVAVTPGSAFGAPGWIRIS--YATSMERLKEALERLEKVL 377 (378)
T ss_pred EEECCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHH
T ss_conf 99789999999999997098999817445999939999--8089999999999999985
No 104
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.76 E-value=1.8e-16 Score=128.18 Aligned_cols=334 Identities=17% Similarity=0.211 Sum_probs=202.1
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 7997646410226743578789999999999997314--50687578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW--HVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~--~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
..|++.|++.-|. -.+.- .|.|.+|+.+.++... |.+.....+.+.++++.+.+..+ .|.+++++++++|.
T Consensus 28 ~~G~dvi~l~~g~--pd~~~-p~~i~~a~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~d~I~it~G~~~al 104 (389)
T PRK05764 28 AAGRDVISLGAGE--PDFDT-PEHIKEAAIAALDEGKTKYTPAAGIPELREAIAEKLKRDNGLDYEPDQIIVTTGAKQAL 104 (389)
T ss_pred HCCCCEEECCCCC--CCCCC-CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHH
T ss_conf 7799827888978--99998-89999999999847999998998879999999999999868998579789888879999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++..- .+| +.|+..+-+|.+.........+.... -|..+ ..-...|++++++.+.+++-++++
T Consensus 105 ~~~~~~l~-------~pG-D~Vlv~~P~Y~~y~~~~~~~g~~~v~----vp~~~--~~~~~~d~~~l~~~~~~~~k~i~l 170 (389)
T PRK05764 105 YNAFMALL-------NPG-DEVIIPAPYWVSYPEMVKLAGGKPVF----VPTGE--ENGFKLTPEQLEAAITPKTKALIL 170 (389)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCHHHHHHHHHCCCEEEE----ECCCH--HHCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999958-------999-98998578624589999964986555----04362--208768999999863846649998
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-------EEECCCCCC-CCCCC
Q ss_conf -332222112462101232211022345721310110034444555310111245453-------021034444-44344
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD-------IMTIAKGMG-GGFPI 253 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD-------i~~~gK~l~-gG~P~ 253 (392)
-| ..-.|. ..+++-+++|.++|++||+++|.||+...+--.|.-+-. ...+.|| +-.+||.++ .|+=+
T Consensus 171 ~~P-~NPtG~-v~s~~~l~~l~~~a~~~~i~ii~DEiY~~l~~~~~~~~~-~~~~~~~~~~~vi~~~S~SK~~~lpGlRi 247 (389)
T PRK05764 171 NSP-SNPTGA-VYSKEELEAIADVAVEHDIWVLSDEIYEKLVYDGFEFTS-IASLSPELFDRTITVNGFSKAYAMTGWRL 247 (389)
T ss_pred CCC-CCCCCC-CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC-HHHHCCHHHCCCEEECCCCCCCCCCCCCE
T ss_conf 899-899886-757799999999988635327510134355568988888-77849012114314314430247866036
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH----HHCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 3210001112222233223453211110012334554320122210112----100002688999988679707550464
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVI----NIAKILFEGLTAIKNRFPNMFLEVRGQ 329 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~----~~g~~l~~~L~~l~~~~~~~v~~vRG~ 329 (392)
|.+++.+++.+.+.......+.+.++++-.++.+.|+- .++++++.+ ++-+.+.+.| .++++ +.-.+..
T Consensus 248 G~~i~~~~li~~~~~~~~~~~~~~~~~~Q~aa~~al~~--~~~~~~~~~~~~~~rr~~l~~~l----~~~~g-~~~~~P~ 320 (389)
T PRK05764 248 GYAAGPKELIKAMSKLQSQSTSNPTSIAQYAAIAALTG--PQDAVEEMRKAFEERRDLMVDGL----NEIPG-LECPKPE 320 (389)
T ss_pred EEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHH----HHCCC-CEECCCC
T ss_conf 99982999999999998541478986999999999859--78789999999999999999999----84899-8864788
Q ss_pred EEEEE-EEEC---CCHHHHHHHHH-HCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 00999-8724---99899999999-6898996268----98899558986889999999999999999852
Q gi|254780432|r 330 GLLIG-LKTV---FSPALLAAKFR-DECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 330 Gl~~~-ie~~---~~~~~~~~~l~-~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
|.++. +++. .+...+++.+. +.||.+.|.. ++.+|+. +..++++|++++++|.+++++|.
T Consensus 321 G~~~~~~~~~~~~~~~~~~~~~ll~~~gV~~~PG~~Fg~~g~~Rl~--fa~~~e~l~ea~~RL~~~l~~lk 389 (389)
T PRK05764 321 GAFYVFPNVSKGITDSEDFAEALLEEAGVAVVPGIAFGAPGYVRLS--YATSLEDIEEALERIERFLKSLK 389 (389)
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHCC
T ss_conf 1079958888889999999999998199999807324899849999--83889999999999999999758
No 105
>PRK07367 consensus
Probab=99.75 E-value=2.7e-16 Score=127.00 Aligned_cols=335 Identities=16% Similarity=0.202 Sum_probs=203.3
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 7997646410226743578789999999999997314--50687578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW--HVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~--~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
..|++.|++.-|-- .+. ..|.|++|+++.++... |.......+.+..+++.+.+..+ .|.++.++++++|.
T Consensus 25 ~~G~dvi~l~~G~p--d~~-~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~d~I~it~G~~~al 101 (385)
T PRK07367 25 AEGLDVCSFSAGEP--DFD-TPAHIKAAAKKALDEGKTRYGPAAGEPALREAIAHKLRRENGLDYQAENILVTNGGKQSL 101 (385)
T ss_pred HCCCCCEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHH
T ss_conf 77998178989999--998-789999999999865887779999989999999999999858999850499908989999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++.-- .+| ++|+..+-+|.+.............. - |..+ ..-...|.+.+++.+.+++.++++
T Consensus 102 ~~~~~~l~-------~pG-D~Vlv~~P~y~~y~~~~~~~g~~~v~-v---~~~~--~~~~~~d~~~l~~~~~~~~k~~il 167 (385)
T PRK07367 102 YNLMMALI-------DPG-DEVIIPAPYWLSYPEMVKLAGGTPVI-V---PTDA--ATGFKITPEQLRQAITPKTKLLVL 167 (385)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCCCCHHHHHHCCCEEEE-E---CCCC--CCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999974-------899-98999069877719999980985799-2---1362--127677999999737867749997
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC----E---EECCCCCC-CCCCC
Q ss_conf -332222112462101232211022345721310110034444555310111245453----0---21034444-44344
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD----I---MTIAKGMG-GGFPI 253 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD----i---~~~gK~l~-gG~P~ 253 (392)
-| ..--|. ..+++-++++.++|++||+++|.||+...+---|..+-+ ...+.|| . -.+||.++ .|+=+
T Consensus 168 ~~P-~NPTG~-v~s~~~l~~l~~~a~~~~~~iIsDEiY~~l~f~~~~~~s-~~~~~~~~~~~~i~~~s~SK~~~~~G~Ri 244 (385)
T PRK07367 168 NSP-SNPTGM-VYTPEEIAALAEVIVEHDLYVVSDEIYEKILYDGAEHLS-IGSLGPEIFQRTIISNGFAKAYSMTGWRV 244 (385)
T ss_pred CCC-CCCCCC-CCCHHHHHHHHHHHHHCCEEEEECCCCHHHCCCCCCCCC-HHHHCCCCCCCCHHHCCCCCCCCCCCCEE
T ss_conf 899-798785-665788889988887558699711321121058977778-88859420246401001000367761248
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEE
Q ss_conf 32100011122222332234532111100123345543201--2221011210000268899998867970755046400
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGL 331 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl 331 (392)
|.+++.+++++.+.......+...+.++-.++.+.|+--++ +++.+..++.-+.+.+.|++ .|+ +.-.+..|.
T Consensus 245 G~~~~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~rr~~l~~~l~~----~~~-~~~~~P~G~ 319 (385)
T PRK07367 245 GYLAGPVELIKAASSIQSHSTSNVCTFAQYGAIAALESPQDCVEEMRQAFAERRQLMLDGLNA----IPG-LSCPKPEGA 319 (385)
T ss_pred EEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH----CCC-CEECCCCEE
T ss_conf 878568999999998542055545789999999999584989999999999999999999983----799-675588847
Q ss_pred EEE-EEEC---CCHHHHHHHHH-HCCEEEEEC----CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999-8724---99899999999-689899626----89889955898688999999999999999985
Q gi|254780432|r 332 LIG-LKTV---FSPALLAAKFR-DECLLTAPS----SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 332 ~~~-ie~~---~~~~~~~~~l~-~~Gll~~~~----~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
|+. +++. .+...+++++. +.||.+.|. .++.+|+. +..++++|++++++|.+.++.|
T Consensus 320 ~~~w~~l~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~Rl~--~a~~~~~l~ea~~RL~~~l~~l 385 (385)
T PRK07367 320 FYVFVDISKTGLGSLEFCRQLLEEHHVAAIPGIAFGADDHIRLS--YATDLATIEKGLERLERFVRSL 385 (385)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
T ss_conf 99978889989999999999999699999758746999939999--7098999999999999999849
No 106
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.74 E-value=1.5e-16 Score=128.61 Aligned_cols=322 Identities=15% Similarity=0.171 Sum_probs=191.5
Q ss_pred EEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH-------HHHHHHHHHCC---CCCCCCCCCCCCCHH
Q ss_conf 46410226743578789999999999997314506875781899-------99986520101---333123565554035
Q gi|254780432|r 34 FLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQE-------IFANHLIHSTF---ADRVFFTNSGAESVE 103 (392)
Q Consensus 34 yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~-------~la~~L~~~~~---~~~v~f~~SGseA~e 103 (392)
|+|-.+. +.-.|+++++|.+.++....-+....+.... +.-+++.+..+ .+.+.|+.|+|||+-
T Consensus 2 YlD~aat------t~~~~~V~~~~~~~~~~~~~np~~~~~~~~~~a~~~le~aR~~ia~~lg~~~~~eI~fts~aTea~n 75 (373)
T cd06453 2 YLDNAAT------SQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAIN 75 (373)
T ss_pred CCCCCCC------CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHH
T ss_conf 4548764------6899999999999999758998730509999999999999999999749699897999188679987
Q ss_pred HHHHH-HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 67776-65432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 104 CAIKT-ARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 104 ~Aikl-ar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
.+++- .+.. ++|. .||.-.--|+. ....+. ....+.++.-..-++.....-|++++++.+.+++..|.+
T Consensus 76 ~~~~~l~~~~-----~~gd-~Vi~s~~EH~s-~~~p~~---~la~~~G~~v~~ip~~~~G~i~~~~l~~~i~~~T~lV~~ 145 (373)
T cd06453 76 LVAYGLGRAN-----KPGD-EIVTSVMEHHS-NIVPWQ---QLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAV 145 (373)
T ss_pred HHHHHHHHCC-----CCCC-EEEECCCCCCC-HHHHHH---HHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 8865302026-----9999-89976011124-278999---998705958985078978858899999754589569999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCCCCCCCCCCC
Q ss_conf 33222211246210123221102234572131011003444455531011124545302103--4444443443210001
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA--KGMGGGFPIGACLATN 260 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g--K~l~gG~P~sav~~~~ 260 (392)
--+..+.|.+.| ++.+.++|+++|+++++|=+|. +|.. -.+--.+.+|+++++ | +.|+.=+|++..++
T Consensus 146 ~~v~n~tG~~~p----i~~I~~~~~~~g~~~~vDa~Qa-~g~~----~idv~~~~~D~~~~s~hK-~~GP~G~G~Lyv~~ 215 (373)
T cd06453 146 THVSNVLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHM----PVDVQDLGCDFLAFSGHK-MLGPTGIGVLYGKE 215 (373)
T ss_pred ECCCCCCCCCCC----HHHHHHHHHHCCCEEEEECCCC-CCCC----CCCHHHHHCCEEEEECHH-CCCCCCEEEEEECC
T ss_conf 785667760887----9999999987497699876212-4554----651777627738976101-15888349999860
Q ss_pred CCCCCCCCCCCCCC---------------------CCCCCCCHHHHHHHHHHHHCC---CCCCHHHHHCCHHHHHHHHHH
Q ss_conf 11222223322345---------------------321111001233455432012---221011210000268899998
Q gi|254780432|r 261 EVAACMNQGSHGST---------------------YGGNVLAMVLGEKVLNIIQSD---GFLENVINIAKILFEGLTAIK 316 (392)
Q Consensus 261 ~i~~~~~~~~~~~T---------------------~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~ 316 (392)
++.+.+.+...+.+ -+-|..++++..++|+++.+. ++.++.+.+.+++.++|+++.
T Consensus 216 ~~~~~l~p~~~gg~~~~~~~~~~~~~~~~~~rfe~GT~n~~~i~~l~~al~~~~~~g~~~i~~~~~~L~~~l~~~L~~l~ 295 (373)
T cd06453 216 ELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIP 295 (373)
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 14524783316887533323432222555220255675588999999999999984899999999999999999996389
Q ss_pred HHCCCEEEEECCCEEEEEEEEC-CCHHHHHHHHHHCCEEEEEC------------CCCEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 8679707550464009998724-99899999999689899626------------8988995589868899999999999
Q gi|254780432|r 317 NRFPNMFLEVRGQGLLIGLKTV-FSPALLAAKFRDECLLTAPS------------SDNVVRILPPLTITAEEIHEGLERI 383 (392)
Q Consensus 317 ~~~~~~v~~vRG~Gl~~~ie~~-~~~~~~~~~l~~~Gll~~~~------------~~~~irl~Ppl~it~~eid~~i~~l 383 (392)
. -.++.+...+.-++.+.+. .++..+...|.++|+.++.. -+..||++|...-|++|||++++.|
T Consensus 296 ~--v~i~~~~~~r~~ivsf~~~~~~~~~v~~~L~~~gI~vs~G~~Ca~~~~~~~g~~g~iRvS~~~ynt~~dId~li~al 373 (373)
T cd06453 296 G--VRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred C--CEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC
T ss_conf 9--76248845568889999699599999999967992997863324488997289987999688889999999999559
No 107
>PRK07324 transaminase; Validated
Probab=99.74 E-value=1.6e-16 Score=128.42 Aligned_cols=306 Identities=18% Similarity=0.212 Sum_probs=190.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 14506875781899999865201013331235655540356777665432001347860023435465654321234553
Q gi|254780432|r 64 LWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGG 143 (392)
Q Consensus 64 ~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~ 143 (392)
+.+.......+.+.+.|+.. +...+|.+..++++++|+..+++..- .+| +.||....+|++......+...
T Consensus 56 l~Y~~~~G~~~LR~~Ia~~y-~~v~~d~IlvT~Ga~~Al~l~~~~l~-------~pG-D~Viv~~P~Y~~~~~~~~~~G~ 126 (373)
T PRK07324 56 LTYGWIEGSPEFKEAVASLY-QNVKPDNILQTNGATGANHLVLYALI-------EPG-DHVISVYPTYQQLYDIPESLGA 126 (373)
T ss_pred CCCCCCCCCHHHHHHHHHHH-CCCCHHHEEECCCHHHHHHHHHHHHC-------CCC-CEEEECCCCCHHHHHHHHHCCC
T ss_conf 77788889899999999986-69986788986878999999999975-------999-9899889985779999998398
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC
Q ss_conf 21134799986433322210026887541012332222333222211246210123221102234572131011003444
Q gi|254780432|r 144 KLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG 223 (392)
Q Consensus 144 ~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 223 (392)
.... .|..+ ..-.-.|++++++.+.++.-.+++-.-+.-.|. ..+++-+++|.++|++||+.+|.|||..+|.
T Consensus 127 ~v~~----~~l~~--~~~~~~Dl~~l~~~i~~~tkliil~nP~NPTG~-v~s~e~l~~l~~la~~~~i~iisDEiY~~l~ 199 (373)
T PRK07324 127 EVDY----WKLRE--ENGWLPDLDELKRLVRPNTKLICINNANNPTGA-LMDRAFLEEIVEIAKSVDAYVLSDEVYRPLD 199 (373)
T ss_pred EEEE----CCCCC--CCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCC-CCCHHHHHHHHHHHHCCCEEEEECCCCCCCC
T ss_conf 7654----07672--259887999999618878769997999798897-7889999999987541785998125542235
Q ss_pred CCCCCCCCCCCCCCCC---EEECCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 4555310111245453---021034444-443443210001112222233223453211110012334554320122210
Q gi|254780432|r 224 RTGKLFAYEWANVKPD---IMTIAKGMG-GGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLE 299 (392)
Q Consensus 224 RtG~~f~~e~~gi~PD---i~~~gK~l~-gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~ 299 (392)
..|.+-.. .++.+. +-.+||.++ .|+-+|-+++.+++.+.+......+|.+.+.+.-.+|...++. .+.+++
T Consensus 200 ~~~~~~s~--~~~~~~~I~~~S~SK~~~l~GlRiGwiv~~~~li~~~~~~~~~~~i~~~~~~~~~a~~al~~--~~~~l~ 275 (373)
T PRK07324 200 EEGSFPSI--ADLYEKGISTNSLSKTYSLPGIRVGWIATNEEVIDIFRKYRDYTMICAGVFDDMLASLALEH--RDAILE 275 (373)
T ss_pred CCCCCCHH--HHHHHCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC--HHHHHH
T ss_conf 79750105--65755758971541125677743799966999999999998653556656999999999968--399999
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCEEEEECCCEE---EEEEEECCCHHHHHHHHH-HCCEEEEECC----CCEEEECCCCCC
Q ss_conf 11210000268899998867970755046400---999872499899999999-6898996268----988995589868
Q gi|254780432|r 300 NVINIAKILFEGLTAIKNRFPNMFLEVRGQGL---LIGLKTVFSPALLAAKFR-DECLLTAPSS----DNVVRILPPLTI 371 (392)
Q Consensus 300 ~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl---~~~ie~~~~~~~~~~~l~-~~Gll~~~~~----~~~irl~Ppl~i 371 (392)
+.++.-+.-++.+.++..+.|. +.-++-.|- +.-++...+...++.++. +.||.+.|.. ++.+|+. +..
T Consensus 276 ~~~~~~~~n~~~l~~~l~~~~~-~~~~~P~gg~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~g~~Ri~--fa~ 352 (373)
T PRK07324 276 RNRKIVRTNLAILDEWVAKEPR-VSYVKPKAVSTSFIKLDVDMDSEEFCEKLLKETGVLLVPGNRFDLEGHVRIG--YCC 352 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHCCC-CEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EEC
T ss_conf 9999999999999999973888-5376358614799878999899999999999689999748865899949999--819
Q ss_pred CHHHHHHHHHHHHHHHHHHCC
Q ss_conf 899999999999999998529
Q gi|254780432|r 372 TAEEIHEGLERIERTAIKLSH 392 (392)
Q Consensus 372 t~~eid~~i~~l~~al~~L~~ 392 (392)
++++|.+++++|.+++++|.+
T Consensus 353 ~~~~l~egl~RL~~~l~~l~~ 373 (373)
T PRK07324 353 DTKTLKKGLKKLSEFLRKLDS 373 (373)
T ss_pred CHHHHHHHHHHHHHHHHHHCC
T ss_conf 899999999999999997369
No 108
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.74 E-value=4.6e-16 Score=125.46 Aligned_cols=336 Identities=17% Similarity=0.209 Sum_probs=200.6
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC---CCCCCCCCCHHHHHHHHHHHHHCC----CCC-CCCCCCCCC
Q ss_conf 799764641022674357878999999999999731---450687578189999986520101----333-123565554
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL---WHVSNLYQSTQQEIFANHLIHSTF----ADR-VFFTNSGAE 100 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~---~~~~~~~~~~~~~~la~~L~~~~~----~~~-v~f~~SGse 100 (392)
.+|...|++.-|. -.+ .-+|+|++|+.++++.. .|.......+.+..+|+.+....+ .+. ++.++++++
T Consensus 24 ~~~~~iI~l~~G~--pd~-~~p~~v~~a~~~al~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~~I~vt~Ga~~ 100 (389)
T PRK05957 24 RENPGTISLGQGV--VSY-PPPPEAIEALNNFLANPENHLYQSVQGIPPLLEAITQKLQADNGIEINNENAIVVTAGSNM 100 (389)
T ss_pred HCCCCCEECCCCC--CCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 7599938899989--999-9889999999999828678868997574999999999999996899898988998878899
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 03567776654320013478600234354656543212345532113479998643332221002688754101233222
Q gi|254780432|r 101 SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI 180 (392)
Q Consensus 101 A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav 180 (392)
|...+++.-- .+| +.|+..+-+|.+.........+++.. -|. +.-...|.+.+++.+.+++-++
T Consensus 101 al~~~~~al~-------~pG-D~Vlv~~P~Y~~~~~~~~~~g~~~v~----vp~----d~~~~~~~~~l~~~i~~~~k~i 164 (389)
T PRK05957 101 AFMNAILAIT-------DPG-DEIILNTPYYFNHEMAITMAGCQPVL----VPT----DENYQLRPEAIEAAITPKTRAI 164 (389)
T ss_pred HHHHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHCCCCEEE----EEC----CCCCCCCHHHHHHHCCCCCEEE
T ss_conf 9999999975-------999-98997788776689999974993588----657----9988979999998451026278
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC-CCCCC-CCCCCCC---EEECCCCCC-CCCCC
Q ss_conf 23-332222112462101232211022345721310110034444555-31011-1245453---021034444-44344
Q gi|254780432|r 181 LI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK-LFAYE-WANVKPD---IMTIAKGMG-GGFPI 253 (392)
Q Consensus 181 i~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~-~f~~e-~~gi~PD---i~~~gK~l~-gG~P~ 253 (392)
++ -| ..-.|. ..+++.+++|.++|++||+++|.||+..-+--.|. .+... ..+...- +-.+||.++ .|+-+
T Consensus 165 il~~P-~NPTG~-v~s~~~l~~l~~la~~~~~~ii~DE~Y~~l~~~~~~~~s~~~~~~~~~~vI~i~S~SK~~~~~G~Rv 242 (389)
T PRK05957 165 VTISP-NNPTGV-VYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRI 242 (389)
T ss_pred ECCCC-CCCCCC-CCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 61899-899898-8767789999987606781899898432134588666776544563454301344431244656434
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEE
Q ss_conf 32100011122222332234532111100123345543201--2221011210000268899998867970755046400
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGL 331 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl 331 (392)
|.+++.+++++.+.......+...+.++-.++.+.|+.-++ ++..++.++.-+.+.+.|++ +++.+.-....|.
T Consensus 243 G~~v~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~~r~~~~~~l~~----~~~~~~~~~p~G~ 318 (389)
T PRK05957 243 GYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLAQ----LQDWCFLHPANGA 318 (389)
T ss_pred EEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH----CCCCEEECCCCEE
T ss_conf 889838999999999985456785399999999999779999999999999999999999985----6897266079857
Q ss_pred E-EEEEEC--CCHHHHHHHHH-HCCEEEEEC------CCCEEEECCCC-CCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9-998724--99899999999-689899626------89889955898-6889999999999999999852
Q gi|254780432|r 332 L-IGLKTV--FSPALLAAKFR-DECLLTAPS------SDNVVRILPPL-TITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 332 ~-~~ie~~--~~~~~~~~~l~-~~Gll~~~~------~~~~irl~Ppl-~it~~eid~~i~~l~~al~~L~ 391 (392)
| +=+++. .+...+.+++. +.||.+.|. +++.+||+ | ..++++|++++++|.++|+++.
T Consensus 319 f~~~~~~~~~~~~~~~~~~ll~e~gV~v~PG~~Fg~~~~~~~Rls--f~~~~~e~l~eg~~RL~~alk~~~ 387 (389)
T PRK05957 319 FYCFLKVNTDLNDFELVKQLIRDYRVAVIPGSTFGMKNGCYLRIA--YGALQKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--ECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999897898969999999999979999978731088999989998--542999999999999999999997
No 109
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.73 E-value=2.7e-16 Score=127.03 Aligned_cols=334 Identities=18% Similarity=0.165 Sum_probs=196.9
Q ss_pred CCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCC-CCCCCCHHHHHHHHHHHHHC----CCCCCCCCCCCCCCHHH
Q ss_conf 9764641022674357878999999999999731-450-68757818999998652010----13331235655540356
Q gi|254780432|r 31 GIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHV-SNLYQSTQQEIFANHLIHST----FADRVFFTNSGAESVEC 104 (392)
Q Consensus 31 G~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~-~~~~~~~~~~~la~~L~~~~----~~~~v~f~~SGseA~e~ 104 (392)
.+..|||..|. ..+. -.+.|++|+++.++.. .++ ......+.+.++++.+.+.. ..|.++.++++++|...
T Consensus 31 ~~dvI~l~~G~--pd~~-~p~~i~~a~~~~l~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~v~~d~I~vt~G~~~al~~ 107 (390)
T PRK08361 31 MENVISLGIGE--PDFD-TPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYL 107 (390)
T ss_pred CCCCEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHH
T ss_conf 99938998998--9998-78999999999984688888998887999999999999987889882329987789999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC-
Q ss_conf 7776654320013478600234354656543212345532113479998643332221002688754101233222233-
Q gi|254780432|r 105 AIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIE- 183 (392)
Q Consensus 105 Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~E- 183 (392)
+++.-- .+| ..|+..+-+|.+.............. - |..+ +.-...|++++++.+.++.-++++-
T Consensus 108 ~~~~l~-------~pG-D~Vli~~P~Y~~y~~~~~~~g~~~~~-v---pl~~--~~~~~~d~~~l~~~~~~~~k~ivl~~ 173 (390)
T PRK08361 108 AFESLL-------EQG-DEVIIPDPAFVCYVEDAKIAEAKPIR-I---PLRE--ENNFQPDPDELLEAITKRTRMIVINY 173 (390)
T ss_pred HHHHHC-------CCC-CEEEECCCCHHHHHHHHHHCCCEEEE-E---ECCC--CCCCCCCHHHHHHHCCCCCEEEEECC
T ss_conf 999965-------999-98998476077799999982997999-9---7158--78987799999973654675999889
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC----EEECCCCCC-CCCCCCCCCC
Q ss_conf 32222112462101232211022345721310110034444555310111245453----021034444-4434432100
Q gi|254780432|r 184 PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD----IMTIAKGMG-GGFPIGACLA 258 (392)
Q Consensus 184 pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD----i~~~gK~l~-gG~P~sav~~ 258 (392)
| +.-.|. ..+++-+++|.++|++||+++|.||+...+---|.-+.. .....|| +-.+||.++ .|+=+|.+++
T Consensus 174 P-~NPTG~-v~s~e~l~~l~~la~~~~i~ii~DE~Y~~l~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~ 250 (390)
T PRK08361 174 P-NNPTGA-VLDKETAKAIADIAEDYNIYILSDEPYEHFLYEDAKHYP-MIKFAPDNTILANSFSKTFAMTGWRLGFVIA 250 (390)
T ss_pred C-CCCCCC-CCCHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCCCCCC-HHHHCCCCEEEEECCHHHCCCCCCCEEEEEE
T ss_conf 9-897577-866788889999998639553470656876038875420-1131355289980252414787423799983
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHH---HHHHHHHCCCEEEEECCCEEEE-E
Q ss_conf 01112222233223453211110012334554320122210112100002688---9999886797075504640099-9
Q gi|254780432|r 259 TNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEG---LTAIKNRFPNMFLEVRGQGLLI-G 334 (392)
Q Consensus 259 ~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~---L~~l~~~~~~~v~~vRG~Gl~~-~ 334 (392)
.++++..+.......+.+.+.+.-.++.+.| .+....+.++++-+.+.++ +.+...+.|+ +.-++..|-++ =
T Consensus 251 ~~~~i~~~~~~~~~~~~~~~~~~q~a~~~al---~~~~~~~~~~~~~~~~~~rr~~~~~~l~~~~g-~~~~~P~gg~~lw 326 (390)
T PRK08361 251 PTQVIREMIKLHAYVIGNVASFVQIAGIEAL---RSKESWKAVEEMRKEYNERRKLVLKRLNKMPH-ITVFEPKGAFYVF 326 (390)
T ss_pred CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CEECCCCEEEEEE
T ss_conf 8999999999976602787689999999998---48504899999999999999999999985899-6866888666997
Q ss_pred EEEC---CCHHHHHHHHHHC-CEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8724---9989999999968-9899626------89889955898688999999999999999985
Q gi|254780432|r 335 LKTV---FSPALLAAKFRDE-CLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 335 ie~~---~~~~~~~~~l~~~-Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+++. .+...+++.+.++ ||.+.|. +++.+|++ +..++++|.+++++|.+++.+|
T Consensus 327 ~~l~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~--f~~~~e~l~eal~Rl~~al~~L 390 (390)
T PRK08361 327 PKIDETDMSSEDFSEWLLEKARVVVIPGTAFGKMGEGYVRIS--YATSKEKLIEAMERMEKALSKL 390 (390)
T ss_pred EECCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHC
T ss_conf 888888989999999999719999988732288999979999--7299999999999999999719
No 110
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.73 E-value=5.5e-15 Score=118.43 Aligned_cols=333 Identities=14% Similarity=0.132 Sum_probs=195.9
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH------HHHH-HHHHHCC---CCCCCCCCCC
Q ss_conf 7997646410226743578789999999999997314506875781899------9998-6520101---3331235655
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQE------IFAN-HLIHSTF---ADRVFFTNSG 98 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~------~la~-~L~~~~~---~~~v~f~~SG 98 (392)
.++.-|+|-.++ +.-.++|++|+.+.+...........+.... +-++ ++.+..+ .+.+.|+.|+
T Consensus 14 ~~~~iYlDnAat------t~~p~~V~~a~~~~~~~~~~n~~~s~~~~~~~~~~~~e~aR~~iA~~lga~~~~~Iifts~~ 87 (398)
T TIGR03392 14 QDGTVYLDSAAT------ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGT 87 (398)
T ss_pred CCCEEEEECCCC------CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCH
T ss_conf 999088678632------68989999999999986348887514399999999999999999997095998979995877
Q ss_pred CCCHHHHHHH-HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 5403567776-654320013478600234354656543212345532113479998643332221002688754101233
Q gi|254780432|r 99 AESVECAIKT-ARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDT 177 (392)
Q Consensus 99 seA~e~Aikl-ar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~i 177 (392)
||++-.+++- ++.. -++| ..||+...-+|....-...+. .+.++.-..-.+......|++.+++.+.+++
T Consensus 88 Te~~n~~~~~~~~~~----~~~g-d~ii~s~~EH~s~~~pw~~~~----~~~g~~v~~~~~~~~~~~d~~~l~~~i~~~T 158 (398)
T TIGR03392 88 TESINLVAQSYARPR----LQPG-DEIIVSEAEHHANLIPWLMVA----QQTGAKVVKLPIGADLLPDIRQLPELLTPRT 158 (398)
T ss_pred HHHHHHHHHHHHHHH----CCCC-CEEEEECCCCCCCHHHHHHHH----HHCCCEEEEECCCCCCCCCHHHHHHHCCCCC
T ss_conf 999998987768872----3998-989982440034238999887----6448527996147889879999998525787
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCCCCCC
Q ss_conf 2222333222211246210123221102234572131011003444455531011124545302103--44444434432
Q gi|254780432|r 178 AAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA--KGMGGGFPIGA 255 (392)
Q Consensus 178 Aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g--K~l~gG~P~sa 255 (392)
..|-+--+..+.|.+.| ++++.++|+++|+++++|=+|. +|.. ..-.+.+ ..|+++++ | +.|-.=+|+
T Consensus 159 ~lVsi~~vsn~~G~i~p----i~~I~~~~~~~g~~~~vDa~Q~-~g~~--~idv~~~--~~D~~~~S~hK-l~GP~G~G~ 228 (398)
T TIGR03392 159 RILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG--PPDVQAL--DIDFYAFSGHK-LYGPTGIGV 228 (398)
T ss_pred CEEEEECCCCCCCCCCC----HHHHHHHHHHCCCEEEEECCCC-CCCC--CCCCCCC--CCCEEEEECCC-CCCCCCEEE
T ss_conf 08998255567888587----9999999986597478633411-5620--3341026--78779986553-569984189
Q ss_pred CCCCCCCCCCCCCCCCCCC------------------C---CCCCCCHHHHHHHHHHHHCCC---CCCHHHHHCCHHHHH
Q ss_conf 1000111222223322345------------------3---211110012334554320122---210112100002688
Q gi|254780432|r 256 CLATNEVAACMNQGSHGST------------------Y---GGNVLAMVLGEKVLNIIQSDG---FLENVINIAKILFEG 311 (392)
Q Consensus 256 v~~~~~i~~~~~~~~~~~T------------------~---~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~ 311 (392)
+..++++.+.+.|...|.. | +-|..++++..++++++.+.+ +.++.+.+.+++.++
T Consensus 229 Ly~~~~~~~~l~p~~~Gg~~~~~~~~~~~~~~~~~~r~e~GT~n~~~i~gl~~al~~l~~~~~~~~~~~~~~L~~~~~~~ 308 (398)
T TIGR03392 229 LYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEER 308 (398)
T ss_pred EEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99841147437973579973443347776445550211468854878999999999999649999999999999999999
Q ss_pred HHHHHHHCCCEEEEECCCE-EEEEEEECC-CHHHHHHHHHHCCEEEEECC------------CCEEEECCCCCCCHHHHH
Q ss_conf 9999886797075504640-099987249-98999999996898996268------------988995589868899999
Q gi|254780432|r 312 LTAIKNRFPNMFLEVRGQG-LLIGLKTVF-SPALLAAKFRDECLLTAPSS------------DNVVRILPPLTITAEEIH 377 (392)
Q Consensus 312 L~~l~~~~~~~v~~vRG~G-l~~~ie~~~-~~~~~~~~l~~~Gll~~~~~------------~~~irl~Ppl~it~~eid 377 (392)
|.+ .|++ ...|..+ -++++.+.. ....+...+.++|+.+.... +.+||+++...-|++|||
T Consensus 309 l~~----l~g~-~~~~~~~~~~~~f~~~~~~~~~l~~~L~~~gi~v~~G~~ca~~~l~a~g~~g~iRvS~~~ynT~edId 383 (398)
T TIGR03392 309 LAQ----LPGF-RSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVD 383 (398)
T ss_pred HHH----CCCC-CCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHH
T ss_conf 863----8996-44579999679998799399999999977897996686654899998689987999678888999999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999999852
Q gi|254780432|r 378 EGLERIERTAIKLS 391 (392)
Q Consensus 378 ~~i~~l~~al~~L~ 391 (392)
+++++|++++..|.
T Consensus 384 ~li~aL~~~l~~l~ 397 (398)
T TIGR03392 384 ALVDAVGAALELLN 397 (398)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999843
No 111
>PRK06056 consensus
Probab=99.72 E-value=1.3e-15 Score=122.62 Aligned_cols=333 Identities=15% Similarity=0.182 Sum_probs=198.2
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC---CCCCCCCCHHHHHHHHHHHHHC----CCCCCCCCCCCCCC
Q ss_conf 7997646410226743578789999999999997314---5068757818999998652010----13331235655540
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW---HVSNLYQSTQQEIFANHLIHST----FADRVFFTNSGAES 101 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~---~~~~~~~~~~~~~la~~L~~~~----~~~~v~f~~SGseA 101 (392)
..|++.|++.-|. -.+ .-++.+++|+.+++.... |.......+.+..+++++.+.. ..|.++.++++++|
T Consensus 31 ~~G~~vi~l~~G~--Pd~-~~p~~~~~a~~~a~~~~~~~~Y~~~~G~~eLR~aia~~~~~~~g~~~~~d~I~iT~G~~~a 107 (402)
T PRK06056 31 AAGRPVIGFGAGE--PDF-PTPDHIVEAAVAACRDPKNHRYTPAAGLPELREAIAAKTLRDSGYEVSPSQVLVTNGGKQA 107 (402)
T ss_pred HCCCCCEECCCCC--CCC-CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCHHH
T ss_conf 7799827888969--999-9889999999999759988857998681999999999999983899880237980681499
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 35677766543200134786002343546565432123455321134799986433322210026887541012332222
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
...+++.-- .+| +.|+..+-+|.+.........+.+..- |. ..+.-...|++++++.+.+++-+++
T Consensus 108 l~~~~~~l~-------~pG-D~Vlv~~P~y~~y~~~~~~~g~~~v~v----~~--~~~~~~~~d~~~le~~~~~~tk~ii 173 (402)
T PRK06056 108 VYEAFATLL-------DPG-DEVILPAPYWTTYPEAIRLAGGVPVEV----VA--GADQGYLVTVEQLEAARTERTKVLL 173 (402)
T ss_pred HHHHHHHHC-------CCC-CEEEEECCCCCCCHHHHHHCCCCEEEE----CC--CCCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 999999857-------999-989981798756199999728970782----23--7333778799999963666873999
Q ss_pred C-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-------EEECCCCCC-CCCC
Q ss_conf 3-332222112462101232211022345721310110034444555310111245453-------021034444-4434
Q gi|254780432|r 182 I-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD-------IMTIAKGMG-GGFP 252 (392)
Q Consensus 182 ~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD-------i~~~gK~l~-gG~P 252 (392)
+ -| ..--|. ..+++-+++|.++|++||+++|.||+...+--.|.-+.+- .-..|| +-.+||.++ .|+=
T Consensus 174 l~~P-~NPtG~-v~s~e~l~~l~~la~~~~i~ii~DEiY~~l~~~~~~~~s~-~~~~p~~~~~~i~~~S~SK~~~~~G~R 250 (402)
T PRK06056 174 FVSP-SNPTGA-VYSPEQVRAIGRWAAEHGIWVISDEIYEHLVYDGAVFTSI-PAAVPELADRCIVVNGVAKTYAMTGWR 250 (402)
T ss_pred ECCC-CCCCCC-CCCHHHHHHHHHHHHHHCCCEECCHHHHHCCCCCCCCCCH-HHHHHHHHCCCEEEECCCCCCCCCCCE
T ss_conf 8489-798888-7427889999999997146155104432113589888888-886545414644752011335576530
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH----HHHHCCHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 432100011122222332234532111100123345543201222101----1210000268899998867970755046
Q gi|254780432|r 253 IGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN----VINIAKILFEGLTAIKNRFPNMFLEVRG 328 (392)
Q Consensus 253 ~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~~v~~vRG 328 (392)
+|.+++.+++++.+.......+...+++.-.++.+.|+-- .+.+++ .+++-+.+.+.|+ +.+.+ .-..-
T Consensus 251 ~G~~v~~~~~i~~~~~~~~~~~~~~~~~~q~~a~~al~~~--~~~~~~~~~~~~~rr~~~~~~L~----~~~~~-~~~~P 323 (402)
T PRK06056 251 VGWMIGPADVIKAATNLQSHATSNVSNVSQRAALAAVSGP--LDAVAEMREAFDRRRRTIVRMLN----AIPGV-SCPTP 323 (402)
T ss_pred EEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHH----HCCCC-EECCC
T ss_conf 7999708999999999986545774229999999998588--99999998789999999999998----67992-73588
Q ss_pred CEEEEEE-EE------------CCCHHHHHHHHHH-CCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 4009998-72------------4998999999996-898996268----9889955898688999999999999999985
Q gi|254780432|r 329 QGLLIGL-KT------------VFSPALLAAKFRD-ECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 329 ~Gl~~~i-e~------------~~~~~~~~~~l~~-~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.|.++.. ++ ..+...++.++.+ .||.+.|.. ++.+|++ +..++++|++++++|.+.+.+.
T Consensus 324 ~G~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~e~gV~v~PG~~Fg~~g~~Ris--fa~~~e~l~eal~RL~~~l~e~ 401 (402)
T PRK06056 324 DGAFYAYPDVKALLGREIRGRRPQTSAELAALILEEAEVAVVPGEAFGTPGYLRLS--YALGDDDLVEGVRRLQELLSEA 401 (402)
T ss_pred CEEEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
T ss_conf 84469977554533632258998999999999997098999748444899839999--7089999999999999999956
No 112
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.72 E-value=5.1e-15 Score=118.67 Aligned_cols=333 Identities=13% Similarity=0.102 Sum_probs=195.0
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH------HHH-HHHHHHCC---CCCCCCCCCC
Q ss_conf 7997646410226743578789999999999997314506875781899------999-86520101---3331235655
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQE------IFA-NHLIHSTF---ADRVFFTNSG 98 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~------~la-~~L~~~~~---~~~v~f~~SG 98 (392)
.++.-|+|-.+ -+..++.|++||.+.++..........+.... +-+ +++.+..+ .+.+.|+.|+
T Consensus 17 ~~~~iYlD~Aa------tt~~p~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~e~aR~~iA~llga~~~~eI~fts~~ 90 (401)
T PRK10874 17 QDAGVYLDSAA------TALKPQAVIEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDAKNIVWTRGT 90 (401)
T ss_pred CCCCEEEECCC------CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCH
T ss_conf 99948974875------268999999999999986448988641089999999999999999998296998979997965
Q ss_pred CCCHHHHHHH-HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 5403567776-654320013478600234354656543212345532113479998643332221002688754101233
Q gi|254780432|r 99 AESVECAIKT-ARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDT 177 (392)
Q Consensus 99 seA~e~Aikl-ar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~i 177 (392)
||++-.+++- ++.. -++|. .||+...-+|....--+.+. .+.++.-..-........|++.+++.+.+++
T Consensus 91 Te~~n~~~~~~~~~~----~~~gd-~vv~s~~Eh~s~~~pw~~~~----~~~g~~v~~~p~~~~g~~d~~~l~~~i~~~T 161 (401)
T PRK10874 91 TESINMVAQCYARPR----LQPGD-EIIVSEAEHHANLVPWLMVA----QQTGAKVVKLPLGADRLPDVDLLPELITPRS 161 (401)
T ss_pred HHHHHHHHHHHHHHH----CCCCC-EEEEECCCCCCCHHHHHHHH----HHCCCEEEEECCCCCCCCCHHHHHHHHCCCC
T ss_conf 899999999999973----58998-38870441354158999999----8539636994158888759999999855896
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCCCCCC
Q ss_conf 2222333222211246210123221102234572131011003444455531011124545302103--44444434432
Q gi|254780432|r 178 AAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA--KGMGGGFPIGA 255 (392)
Q Consensus 178 Aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g--K~l~gG~P~sa 255 (392)
..|.+--+....|.+.| ++.+.++|+++|+++++|=+|+ +|.. -.+-..+..|+++++ | +.|-.=+|+
T Consensus 162 ~lVai~~vsn~~G~~~p----v~~I~~~~~~~g~~~~vDa~Q~-~g~~----~idv~~l~vD~l~~S~HK-l~GP~G~G~ 231 (401)
T PRK10874 162 RILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHF----PADVQQLDIDFYAFSGHK-LYGPTGIGV 231 (401)
T ss_pred EEEEEECCCCCCCCCCC----HHHHHHHHHHCCCEEEEECCCC-CCCC----CCCHHHHCCCEEEEECHH-CCCCCCEEE
T ss_conf 59999796678865576----9999999976497799753013-7742----546678439889987033-169981499
Q ss_pred CCCCCCCCCCCCCCCCCCC------------------C---CCCCCCHHHHHHHHHHHHCCC---CCCHHHHHCCHHHHH
Q ss_conf 1000111222223322345------------------3---211110012334554320122---210112100002688
Q gi|254780432|r 256 CLATNEVAACMNQGSHGST------------------Y---GGNVLAMVLGEKVLNIIQSDG---FLENVINIAKILFEG 311 (392)
Q Consensus 256 v~~~~~i~~~~~~~~~~~T------------------~---~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~ 311 (392)
+..++++.+.+.|...|.+ | +-|..++++..++++++.+.+ ..++.+.+.+++.++
T Consensus 232 Lyv~~~~~~~l~P~~~Gg~~~~~~~~~~~~~~~~~~r~e~GT~n~~~i~~l~aal~~l~~~~~~~~~~~~~~L~~~~~~~ 311 (401)
T PRK10874 232 LYGKSELLEAMSPWLGGGKMLTEVSFDGFTPQSAPWRLEAGTPNVAGVIGLSAALEWLADIDIEQAESWSRSLATLAEDA 311 (401)
T ss_pred EEECCCHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99853036427865358754002346765425550002577832889999999999999639999999999999999999
Q ss_pred HHHHHHHCCCEEEEECCCE-EEEEEEEC-CCHHHHHHHHHHCCEEEEECC------------CCEEEECCCCCCCHHHHH
Q ss_conf 9999886797075504640-09998724-998999999996898996268------------988995589868899999
Q gi|254780432|r 312 LTAIKNRFPNMFLEVRGQG-LLIGLKTV-FSPALLAAKFRDECLLTAPSS------------DNVVRILPPLTITAEEIH 377 (392)
Q Consensus 312 L~~l~~~~~~~v~~vRG~G-l~~~ie~~-~~~~~~~~~l~~~Gll~~~~~------------~~~irl~Ppl~it~~eid 377 (392)
|.+ .|++ ...|..+ -++.+.+. .....+...+.++|+.++... +..||+++...-|++|||
T Consensus 312 L~~----~~g~-~~~~~~~~~i~sf~~~gi~~~~l~~~L~~~gi~v~~g~~ca~~~l~alg~~g~iRvS~~~ynT~~dId 386 (401)
T PRK10874 312 LAK----RPGF-RSFRCQDSSLLAFDFAGVHHSDMVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVD 386 (401)
T ss_pred HHH----CCCC-CCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHH
T ss_conf 852----8996-53479999889998799599999999977897896185342899998599997999658888999999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999999852
Q gi|254780432|r 378 EGLERIERTAIKLS 391 (392)
Q Consensus 378 ~~i~~l~~al~~L~ 391 (392)
++++.|++++..|-
T Consensus 387 ~li~al~~~v~~lr 400 (401)
T PRK10874 387 ALVNAVDRALELLV 400 (401)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999830
No 113
>PRK05794 consensus
Probab=99.72 E-value=9.2e-16 Score=123.53 Aligned_cols=332 Identities=17% Similarity=0.217 Sum_probs=199.8
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCCCCC-CCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731-4506875-78189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVSNLY-QSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~~~~-~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
..|++.|++.-| --.+ ...|.|++|+.++++.. ..++... ..+.+.++++.+.+..+ .+.+..++++++|.
T Consensus 27 ~~G~dvi~l~iG--~pd~-~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~g~~v~~~~I~it~G~~~al 103 (397)
T PRK05794 27 AEGIDVIGFGAG--EPDF-NTPENIKEAAIDAIEEGYTKYTPASGILELKQAICDKFKKDNGLNYEPSNIIVSNGAKQSL 103 (397)
T ss_pred HCCCCEEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHH
T ss_conf 779982789897--9999-9789999999999855899898997729999999999999858999800189878859999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++.-- .+| +.|+..+.+|.+.....-...+.+... +..+ ..-...|++++++.+.+++-++++
T Consensus 104 ~~~~~~l~-------~pG-D~Vlv~~P~Y~~y~~~~~~~g~~~v~~----~~~~--~~~~~~d~~~l~~~~~~~~k~iil 169 (397)
T PRK05794 104 SNAFEAIL-------NPG-DEVIIPVPYWVSYPELVKLADGVPVFV----DTKE--ENDFKYTIEELENAITSKTKAIII 169 (397)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHCCCCEEEE----ECCC--CCCCCCCHHHHHHHCCCCCCEEEE
T ss_conf 99999966-------998-989982687643499999718802996----5673--237777999999753335718997
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CCCCCCCCCC-------EEECCCCCC-CCCC
Q ss_conf -33222211246210123221102234572131011003444455531-0111245453-------021034444-4434
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AYEWANVKPD-------IMTIAKGMG-GGFP 252 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~e~~gi~PD-------i~~~gK~l~-gG~P 252 (392)
-| ..-.|. ..+++-+++|.++|++||+++|.||+...+--.|.-+ ... .+.|| +-.+||..+ .|+=
T Consensus 170 ~~P-~NPtG~-v~s~~~l~~l~~la~~~~i~visDEiY~~l~~~~~~~~s~~--~~~~~~~~~~i~~~S~SK~~~~~G~R 245 (397)
T PRK05794 170 NSP-NNPTGT-VYSKEELEEIAKFAKEHDLFIISDEIYEKLIYGEEEHISIA--SLSEDAFKRTVVINGMSKAYAMTGWR 245 (397)
T ss_pred CCC-CCCCCC-CCCCHHHHHHHHHHHHCEEEEECHHHHHHHHCCCCCCCCHH--HHCHHHHCCCEECCCCCCCCCCCCCE
T ss_conf 899-898782-43506799999765410368843334577625898887889--95614320332026764444776522
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC----HHHHHCCHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 43210001112222233223453211110012334554320122210----11210000268899998867970755046
Q gi|254780432|r 253 IGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLE----NVINIAKILFEGLTAIKNRFPNMFLEVRG 328 (392)
Q Consensus 253 ~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~----~~~~~g~~l~~~L~~l~~~~~~~v~~vRG 328 (392)
+|.+++.+++.+.+.......+...++++..++.+.|+-- ++.++ ..+++-+.+.+.|. +.+++ .-++-
T Consensus 246 vG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~al~~~--~~~~~~~~~~~~~rr~~l~~~l~----~~~g~-~~~~P 318 (397)
T PRK05794 246 IGYAASSLEIIKVMSNIQSHTTSNPNSIAQYASLEALNGD--QEQIKNMVEEFKKRRDYMVERIN----SIKGL-SCIKP 318 (397)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHH----HCCCC-EEECC
T ss_conf 5877558999999999998666897699999999998587--99999999999999999999986----07996-76068
Q ss_pred CEEEEE-EEEC------------CCHHHHHHHHH-HCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 400999-8724------------99899999999-6898996268----9889955898688999999999999999985
Q gi|254780432|r 329 QGLLIG-LKTV------------FSPALLAAKFR-DECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 329 ~Gl~~~-ie~~------------~~~~~~~~~l~-~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.|.++. +++. .+...++..+. +.||.+.|.. ++.+|+. +..++++|++++++|.+++.+|
T Consensus 319 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~f~~~ll~~~gV~v~PG~~Fg~~~~vRl~--f~~~~e~l~eal~RL~~~l~~L 396 (397)
T PRK05794 319 KGAFYVMVNISKVIGKEIKGNTIKGSIDFANLLLEEENVAVVPGIAFGMDNYIRLS--YATSMENIEKGLDRIENFLNKL 396 (397)
T ss_pred CEEEEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
T ss_conf 81369958783442533468877899999999998499999818535899839999--8299999999999999999857
No 114
>KOG1359 consensus
Probab=99.72 E-value=3.4e-16 Score=126.32 Aligned_cols=331 Identities=18% Similarity=0.230 Sum_probs=207.7
Q ss_pred CEEEEEECCCEEEECCC--CEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCCCCC--CC---CCCHHHHHHHHHHHHH
Q ss_conf 74898501037996799--76464102267435787-89999999999997314506--87---5781899999865201
Q gi|254780432|r 15 DIRFEKGKGAWLFSENG--IPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLWHVS--NL---YQSTQQEIFANHLIHS 86 (392)
Q Consensus 15 p~~i~~a~G~~i~d~dG--~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~~~~--~~---~~~~~~~~la~~L~~~ 86 (392)
--++++-.|..+. .+| +++|.|+. ++-||- +||+|++|-++++++..... .. .+......|..++.+.
T Consensus 49 erVi~s~q~p~i~-v~G~~k~ilnFca---NnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqf 124 (417)
T KOG1359 49 ERVITSRQGPTIQ-VKGSDKKILNFCA---NNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQF 124 (417)
T ss_pred EEEEEECCCCEEE-EECCCCCEEEECC---CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 0588614564499-8126655044224---54334457838889899999982878643168844557999999999987
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCHH
Q ss_conf 0133312356555403567776654320013478600234354656543212345532113479998643-332221002
Q gi|254780432|r 87 TFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIE-GFDQAKFCD 165 (392)
Q Consensus 87 ~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~-~~~~~~~~d 165 (392)
.+.+-...+.|+-+||-.++-.. .+.+.-|.+-+-. |-. + +.|. .+. ...++.-.|
T Consensus 125 h~rED~ilypscfdANag~feai--------l~pedAvfSDeLN-hAS----I-IdGi---------rLckry~h~dv~~ 181 (417)
T KOG1359 125 HGREDTILYPSCFDANAGAFEAI--------LTPEDAVFSDELN-HAS----I-IDGI---------RLCKRYRHVDVFD 181 (417)
T ss_pred HCCCCEEEECCCCCCCHHHHHHH--------CCHHHHHHCCCCC-CCH----H-HHHH---------HHHHHHCCCHHHH
T ss_conf 08775487331003443778774--------4825412100002-203----4-3246---------7776644512677
Q ss_pred HHHHHH-HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC-CCCC-CCCCCCCCCCCCCC--CCCE
Q ss_conf 688754-10123322223332222112462101232211022345721310110-0344-44555310111245--4530
Q gi|254780432|r 166 LQSLKN-QISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV-QTGY-GRTGKLFAYEWANV--KPDI 240 (392)
Q Consensus 166 ~~~l~~-~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV-~tG~-GRtG~~f~~e~~gi--~PDi 240 (392)
+++... .-..+.--|..+.+.++.|++.| |..+.+|.+|||.|+.+||. .||| |.||.- --|.+|+ .+||
T Consensus 182 l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGrG-t~E~~~vm~~vdi 256 (417)
T KOG1359 182 LEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKYGALLFIDECHATGFFGETGRG-TAEEFGVMGDVDI 256 (417)
T ss_pred HHHHHHHHHHHEEEEEEECCEECCCCCCCC----HHHHHHHHHHCCCEEEEEECCCCEEECCCCCC-HHHHHCCCCCCEE
T ss_conf 888777743321799985461214787333----89999999862937998604310565578887-3887377776402
Q ss_pred E--ECCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHH-CCCCCCHHHHHCCHHHHHH
Q ss_conf 2--10344444---4344321000111222223322345321--1110012334554320-1222101121000026889
Q gi|254780432|r 241 M--TIAKGMGG---GFPIGACLATNEVAACMNQGSHGSTYGG--NVLAMVLGEKVLNIIQ-SDGFLENVINIAKILFEGL 312 (392)
Q Consensus 241 ~--~~gK~l~g---G~P~sav~~~~~i~~~~~~~~~~~T~~g--npl~~aaa~a~L~~l~-~~~l~~~~~~~g~~l~~~L 312 (392)
+ |+||+||| || +.+..++.+.+++.+...-|+. .|.....+.++++.+. ...++.+.+.+-++|++.+
T Consensus 257 insTLgKAlGga~GGy----ttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~m 332 (417)
T KOG1359 257 INSTLGKALGGASGGY----TTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFM 332 (417)
T ss_pred HHHHHHHHHCCCCCCC----CCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0424566624777887----468756899998528861421789805541569999999864799998988999999988
Q ss_pred HHHHHHCCCEEEEECCC-----EEEEEEEECCCHHHHHHHHHHCCEEEEEC-------CCCEEEECCCCCCCHHHHHHHH
Q ss_conf 99988679707550464-----00999872499899999999689899626-------8988995589868899999999
Q gi|254780432|r 313 TAIKNRFPNMFLEVRGQ-----GLLIGLKTVFSPALLAAKFRDECLLTAPS-------SDNVVRILPPLTITAEEIHEGL 380 (392)
Q Consensus 313 ~~l~~~~~~~v~~vRG~-----Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~-------~~~~irl~Ppl~it~~eid~~i 380 (392)
+.- + + ++-|. -+|+| ...-.......++.+|+++.+. +.-.||..-+-..|++|||+.+
T Consensus 333 e~a-----G-f-tIsg~~hPI~pv~lG--da~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i 403 (417)
T KOG1359 333 EAA-----G-F-TISGASHPICPVMLG--DARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLI 403 (417)
T ss_pred HHC-----C-C-EECCCCCCCCCEECC--CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEEHHCCHHHHHHHH
T ss_conf 752-----8-2-431788874232316--388888889999855716986258767888447999970104788899999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999985
Q gi|254780432|r 381 ERIERTAIKL 390 (392)
Q Consensus 381 ~~l~~al~~L 390 (392)
++|.++.+.+
T Consensus 404 ~Af~~vgr~~ 413 (417)
T KOG1359 404 EAFSEVGRFL 413 (417)
T ss_pred HHHHHHHHHH
T ss_conf 9999988752
No 115
>PRK07778 consensus
Probab=99.72 E-value=9e-16 Score=123.57 Aligned_cols=334 Identities=15% Similarity=0.130 Sum_probs=197.4
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731--450687578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL--WHVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~--~~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
..|++.||+.-|- -.+ -..+.|++|++++++.. .|+......+.+.++++.+.+..+ .+.++.++++++|.
T Consensus 27 ~~g~dvi~l~iG~--Pd~-~~P~~i~~a~~~a~~~~~~~Y~~~~G~p~LR~aia~~~~~~~g~~~~pe~I~vt~Ga~~al 103 (386)
T PRK07778 27 RTHGDLVNLSAGQ--PSA-GAPEPVRAAAAAALHRNQLGYTVALGIPELREAIAADYQRRHGITVEPDDVVVTTGSSGGF 103 (386)
T ss_pred HCCCCEEECCCCC--CCC-CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHH
T ss_conf 6699907885989--999-8689999999998634999989997849999999999999868998855489817879999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++..- .+| ..||..+-+|-+.............. -|..+. .-...+++.+++ +.+++.++++
T Consensus 104 ~~~~~~l~-------~pG-D~Vlv~~P~Y~~y~~~~~~~g~~~v~----vp~~~~--~~~~~~~~~l~~-~~~~~k~iil 168 (386)
T PRK07778 104 LLAFLACF-------DVG-DRVAMASPGYPCYRNILSALGCEVVE----IPCGPD--TRFQPTAAMLAE-LDPPVRGVIV 168 (386)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHCCCEEEE----CCCCCC--CCCCCHHHHHHH-CCCCCEEEEE
T ss_conf 99999964-------999-98998678651079999973982572----367744--566723889862-5866439998
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCC
Q ss_conf 33222211246210123221102234572131011003444455531011124545302---1034444-4434432100
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLA 258 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~ 258 (392)
-.=+.--|. ..+++.+++|.++|++||+++|.||+...+--.|..+..-.++...+.+ .+||.++ .|+=+|.+++
T Consensus 169 ~~P~NPTG~-v~s~~~l~~l~~la~~~~i~iisDEiY~~l~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~RiG~~~~ 247 (386)
T PRK07778 169 ASPANPTGT-VIAPEELAAIASWCEASGVRLISDEVYHGLVYEGAPPTSCAWETSREAVVVNSFSKYYAMTGWRLGWLLV 247 (386)
T ss_pred CCCCCCCCC-CCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEE
T ss_conf 999898877-8507999999999853787999434325311589998643002478689993043112567760699984
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---CCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEE-EE
Q ss_conf 01112222233223453211110012334554320---122210112100002688999988679707550464009-99
Q gi|254780432|r 259 TNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQ---SDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLL-IG 334 (392)
Q Consensus 259 ~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~---~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~-~~ 334 (392)
.+++++.+.......+...+.++-.++.+.+.--. -+...++.++.-+.+.+.|+++ ++..-....|.+ +=
T Consensus 248 p~~l~~~~~~~~~~~~~~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-----g~~~~~p~~G~fy~~ 322 (386)
T PRK07778 248 PTELRRAVDRLTGNFTICPPALSQYAAVAAFTPEATAEADGHLAHYAENRRLLLDGLRAL-----GITRLAPADGAFYVY 322 (386)
T ss_pred CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCEECCCCEEEEEE
T ss_conf 899999999998507678778999999999560128999999999999999999999975-----995417998478997
Q ss_pred EEEC---CCHHHHHHHHH-HCCEEEEEC-------CCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8724---99899999999-689899626-------898899558986889999999999999999
Q gi|254780432|r 335 LKTV---FSPALLAAKFR-DECLLTAPS-------SDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 335 ie~~---~~~~~~~~~l~-~~Gll~~~~-------~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
+++. .+...++.+|. +.||.+.|. +++.|||+ +.-++++|++++++|++.++
T Consensus 323 ~~~~~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRls--f~~~~~~l~eal~RL~~~l~ 385 (386)
T PRK07778 323 ADVSHLTDDSLAFCSKLLADTGVAIAPGIDFDTVRGNSFVRLS--FAGPTADIEEALRRIGSWLR 385 (386)
T ss_pred EECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHC
T ss_conf 8898889999999999998399999758566889999969999--83989999999999999965
No 116
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.72 E-value=8e-16 Score=123.93 Aligned_cols=334 Identities=14% Similarity=0.167 Sum_probs=196.5
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC---CCCCCCCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCC
Q ss_conf 7997646410226743578789999999999997314---50687578189999986520101----33-3123565554
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW---HVSNLYQSTQQEIFANHLIHSTF----AD-RVFFTNSGAE 100 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~---~~~~~~~~~~~~~la~~L~~~~~----~~-~v~f~~SGse 100 (392)
.+|++.|++.-| .-.+ .-++.|++|+.++++... +.......+.+.++++.+.+..+ .+ .++.++++++
T Consensus 32 ~~G~~vi~L~iG--~Pd~-~~P~~v~~a~~~al~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~~v~vt~Ga~~ 108 (394)
T PRK05942 32 EQGLDLIDLGMG--NPDG-AAPQPVIEAAIAALEDPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE 108 (394)
T ss_pred HCCCCEEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 659981888598--9999-8889999999999838888898997685999999999999986898898875998888899
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 03567776654320013478600234354656543212345532113479998643332221002688754101233222
Q gi|254780432|r 101 SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI 180 (392)
Q Consensus 101 A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav 180 (392)
|...+++.. -.+|. .||..+-+|................ - |.. ...-...|++.+++.+.+++.++
T Consensus 109 al~~~~~al-------~~pGD-~Vlv~~P~Yp~y~~~~~~~g~~~~~-v---~l~--~~~~~~~d~~~l~~~i~~~tk~i 174 (394)
T PRK05942 109 GLTHLALAY-------VNPGD-VVLVPSPAYPAHFRGPLIAGAQIYP-I---ILK--PENDWLIDLSSIPEEVAQQAKIL 174 (394)
T ss_pred HHHHHHHHH-------CCCCC-EEEECCCCCHHHHHHHHHCCCEEEE-E---EEC--CCCCCCCCHHHHHHHHHCCCCEE
T ss_conf 999999995-------79989-8997888867689999985998999-9---705--87688779999998611267089
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CCCCCCCCCCE----EECCCCCC-CCCCC
Q ss_conf 23-33222211246210123221102234572131011003444455531-01112454530----21034444-44344
Q gi|254780432|r 181 LI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AYEWANVKPDI----MTIAKGMG-GGFPI 253 (392)
Q Consensus 181 i~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~e~~gi~PDi----~~~gK~l~-gG~P~ 253 (392)
++ -| ..-.|. ..+++.+++|.++|++||+++|.||+...+---|.-+ +.-...-..|. -.+||..+ .|+-+
T Consensus 175 il~~P-~NPTG~-v~~~e~l~~i~~~a~~~~i~vIsDEiY~~l~~dg~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~Ri 252 (394)
T PRK05942 175 YFNYP-SNPTTA-TAPREFFEEIVAFARKYEILLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRV 252 (394)
T ss_pred EEECC-CCCCCH-HCCHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCE
T ss_conf 99389-881012-2019999999998851786797037410025568766557655465344216603334567877425
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE-
Q ss_conf 32100011122222332234532111100123345543201--222101121000026889999886797075504640-
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG- 330 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G- 330 (392)
|.+++.+++++.+.......+++.+...-.++.+.|+.-++ +.+.++.+++-+.+.+.|.++ ++ .-....|
T Consensus 253 G~ii~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~rrd~l~~~L~~~-----g~-~~~~p~g~ 326 (394)
T PRK05942 253 GFVVGNRDIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRQRRDFLIQGLGEL-----GW-DIPPTKAT 326 (394)
T ss_pred EEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-----CC-EECCCCEE
T ss_conf 9986799999999999985345767699999999985847789999999999999999989876-----96-75378858
Q ss_pred EEEEEEEC--CCHHHHHHHHH-HCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 09998724--99899999999-689899626------8988995589868899999999999999998
Q gi|254780432|r 331 LLIGLKTV--FSPALLAAKFR-DECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 331 l~~~ie~~--~~~~~~~~~l~-~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
+++=+++. .+...++.++. +.||.+.|. +++.+||+ +..++++|++++++|++++.+
T Consensus 327 ~y~w~~~~~~~~~~~f~~~ll~~~gV~v~PG~~Fg~~g~~~iRls--f~~~~~~l~ea~~Rl~~a~~r 392 (394)
T PRK05942 327 MYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRIS--LIADCDRLGEALHRIKQAGIR 392 (394)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHH
T ss_conf 899886899979899999999849999988731178999879999--718899999999999999985
No 117
>PRK07683 aminotransferase A; Validated
Probab=99.72 E-value=1.9e-15 Score=121.43 Aligned_cols=334 Identities=14% Similarity=0.142 Sum_probs=197.7
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCCCH
Q ss_conf 99764641022674357878999999999999731--450687578189999986520101----33-312356555403
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL--WHVSNLYQSTQQEIFANHLIHSTF----AD-RVFFTNSGAESV 102 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~--~~~~~~~~~~~~~~la~~L~~~~~----~~-~v~f~~SGseA~ 102 (392)
++...|++.-| ...+ -..|.|++|+++.++.. .|.......+.+..+++.+.+..+ .+ .++.++++++|.
T Consensus 26 ~~~dvI~l~ig--~pdf-~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lreaia~~~~~~~g~~~~~~~~I~it~G~~~al 102 (387)
T PRK07683 26 NYDNLISLTIG--QPDF-PTPSHVKEAAKRAIDENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAI 102 (387)
T ss_pred CCCCEEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHH
T ss_conf 79991899999--8999-97899999999998579998899988799999999999998589989887599927829999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++.-- .+| ..|+..+-+|.+...........+.+- |..+ .-...|.+.+++.+.+++.++++
T Consensus 103 ~~~~~~~~-------~pG-D~Vlv~~P~Y~~~~~~~~~~g~~~v~v----~~~~---~~~~~d~~~le~~~~~~~k~iil 167 (387)
T PRK07683 103 DIAFRTIL-------EPG-TEVILPAPIYPGYEPIIRLCGATPVFI----DTRE---TGFRLTAEALENAITEKTRCVVL 167 (387)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHCCCEEEEC----CCCC---CCCCCCHHHHHHHCCCCCCEEEE
T ss_conf 99999976-------999-989983787665699999708723536----8786---78878999999735525757864
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE----EECCCCCC-CCCCCCCCC
Q ss_conf 3322221124621012322110223457213101100344445553101112454530----21034444-443443210
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDI----MTIAKGMG-GGFPIGACL 257 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi----~~~gK~l~-gG~P~sav~ 257 (392)
-.-+.-.|. ..+.+.+++|.++|++||+++|.|||..-+---|.....-.+.-.+|- -.+||..+ .|+-+|.++
T Consensus 168 ~~P~NPtG~-v~s~e~l~~i~~la~~~~i~ii~DEiY~~l~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~i~ 246 (387)
T PRK07683 168 PYPSNPTGV-TLSKEELKDIANVLKDKNIFVLSDEIYSELVYDQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLF 246 (387)
T ss_pred CCCCCCCCC-CCCHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEE
T ss_conf 799598978-8789999999997613694475465135540699877643344555403675044101367652279997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC--CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEE-
Q ss_conf 00111222223322345321111001233455432012--221011210000268899998867970755046400999-
Q gi|254780432|r 258 ATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSD--GFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIG- 334 (392)
Q Consensus 258 ~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~--~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~- 334 (392)
+.+++++.+.......+...++++-.++.+.++.-.++ .+.++.++.-+.+.+.|.+. ++ .-++..|.++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~r~~~~~~~L~~~-----g~-~~~~P~G~~~~w 320 (387)
T PRK07683 247 APSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-----GL-DVEKPTGAFYIF 320 (387)
T ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-----CC-CEECCCEEEEEE
T ss_conf 599999999999975657886899999999997698899999999999999999999876-----99-556788127996
Q ss_pred EEEC---CCHHHHHHHHH-HCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8724---99899999999-689899626------89889955898688999999999999999985
Q gi|254780432|r 335 LKTV---FSPALLAAKFR-DECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 335 ie~~---~~~~~~~~~l~-~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+++. .+...++..+. +.||.+.|. +++.+||+ +..++++|++++++|++++.+-
T Consensus 321 ~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~g~~Rls--fa~~~e~l~eal~Rl~~~l~~~ 384 (387)
T PRK07683 321 PSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLS--YAYSIETLKEGLDRLEAFLQKK 384 (387)
T ss_pred EECCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHH
T ss_conf 787888999799999999839999987842288998869999--7199999999999999999987
No 118
>pfam00155 Aminotran_1_2 Aminotransferase class I and II.
Probab=99.72 E-value=5.1e-16 Score=125.19 Aligned_cols=323 Identities=19% Similarity=0.214 Sum_probs=183.2
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHHHHHHCC----CC-CCCCCCCCCCC
Q ss_conf 764641022674357878999999999999731450687578-----189999986520101----33-31235655540
Q gi|254780432|r 32 IPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQS-----TQQEIFANHLIHSTF----AD-RVFFTNSGAES 101 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~-----~~~~~la~~L~~~~~----~~-~v~f~~SGseA 101 (392)
+++|+|.+| . +++--+|+|++|++++++.... +.|.+ +.+..+|+.+....+ .+ .++++++.+++
T Consensus 1 ~d~i~l~~~--~-~~~~~~p~v~~A~~~a~~~~~~--~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~e~~I~~t~G~~~~ 75 (351)
T pfam00155 1 TDKINLGSN--E-YLGDTLPAVAKAEKDALAGGTR--NLYGPTDGLPELREALAKFLGRSPVLKLDREAAVVFGSGAGAN 75 (351)
T ss_pred CCEEEEECC--C-CCCCCCHHHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHH
T ss_conf 970893389--9-9999889999999999749999--8079818789999999998601029999947489981139999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 35677766543200134786002343546565432123455321134799986433322210026887541012332222
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
...+++.-- .+| +.|+..+.+|.+.............. - |..+ ..-...|++.+++.+.+++.+++
T Consensus 76 l~~~~~~l~-------~~g-d~Vli~~P~y~~~~~~~~~~g~~~~~-~---~~~~--~~~~~~d~~~l~~~~~~~~~~i~ 141 (351)
T pfam00155 76 IEALIFLLA-------NPG-DAILVPAPTYASYIRIARLAGGEVVR-Y---PLYD--SNDFHLDFDALEAALKEKPKVVL 141 (351)
T ss_pred HHHHHHHHC-------CCC-CEEEECCCCCHHHHHHHHHCCCEEEE-E---ECCC--CCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 999999966-------994-99998899868899999983997789-8---4564--34779899999975415986999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC-CC-CCCCCC-EE--ECCCCCC-CCCCCCC
Q ss_conf 33322221124621012322110223457213101100344445553101-11-245453-02--1034444-4434432
Q gi|254780432|r 182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY-EW-ANVKPD-IM--TIAKGMG-GGFPIGA 255 (392)
Q Consensus 182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~-e~-~gi~PD-i~--~~gK~l~-gG~P~sa 255 (392)
+..-+.--|. ..+.+.+++|.++|++|++++|.||+...+...+.-+.. .. .+-.+. |+ .+||.++ .|+-+|.
T Consensus 142 i~~P~NPTG~-~~~~~~l~~l~~~a~~~~~~ii~DE~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 220 (351)
T pfam00155 142 HESPHNPTGT-VAPLEELEKLLDLAKEHNILLLVDEAYAGFVFGSPDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGY 220 (351)
T ss_pred ECCCCCCCCC-CCCHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCHHHHCCCCCCEEEEECCHHHCCCCCCCEEE
T ss_conf 8899198777-768899999986530288899982663331527988861333114578679991361523793515599
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHC----CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE
Q ss_conf 100011122222332234532111100123345543-201----222101121000026889999886797075504640
Q gi|254780432|r 256 CLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNI-IQS----DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG 330 (392)
Q Consensus 256 v~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~-l~~----~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G 330 (392)
+++.+++++.+........ ..+|. ..++.+.+.- ... +.+.++.++.-+++.+.|+++ ++ .-....|
T Consensus 221 i~~~~~~i~~l~~~~~~~~-~s~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-----g~-~~~~p~g 292 (351)
T pfam00155 221 ILGNAAVISQLRKLARPFY-SSTHL-QAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAA-----GL-SVLPSQA 292 (351)
T ss_pred EEECHHHHHHHHHHHCCCC-CCHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CC-EECCCCC
T ss_conf 9989999999999716687-47899-999999995845568999999999999999999999878-----98-5727994
Q ss_pred EEEE-EEEC-CCHHHHHHHHHH-CCEEEEEC----CCCEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 0999-8724-998999999996-89899626----8988995589868899999999999
Q gi|254780432|r 331 LLIG-LKTV-FSPALLAAKFRD-ECLLTAPS----SDNVVRILPPLTITAEEIHEGLERI 383 (392)
Q Consensus 331 l~~~-ie~~-~~~~~~~~~l~~-~Gll~~~~----~~~~irl~Ppl~it~~eid~~i~~l 383 (392)
-++. +++. .....+..++++ .||.+.|. .++.+|++-. ..|+++|++++++|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~fg~~~~iRis~a-~~s~e~i~~~~~rl 351 (351)
T pfam00155 293 GFFLLTGLDPETAKELAQVLLEEVGVYVTPGSSPGVPGWLRITVA-GGTEEELEELLEAI 351 (351)
T ss_pred EEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEC-CCCHHHHHHHHHHC
T ss_conf 499999787322999999999759899977888899990899817-89999999999419
No 119
>PRK08443 consensus
Probab=99.72 E-value=2.1e-15 Score=121.22 Aligned_cols=337 Identities=16% Similarity=0.171 Sum_probs=197.0
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCC-CCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731-4506-87578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVS-NLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~-~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
.+|++.|++..|- -.+. ..|.|++|+.+.++.- ..++ .....+.+..+++.+.+..+ .+.++.++++.+|.
T Consensus 26 ~~g~dvi~l~~G~--pd~~-~p~~i~~a~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~pe~I~it~G~~~al 102 (388)
T PRK08443 26 AKGKDILSFSAGE--PDFD-TPQAIKDAAIKAIEKGFTKYTAVAGIPELLKAIATKLKKDNNLDYETNEIITSNGAKHSL 102 (388)
T ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHH
T ss_conf 5699848898998--9998-799999999999855999889998879999999999999858998831299868879999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC-
Q ss_conf 5677766543200134786002343546565432123455321134799986433322210026887541012332222-
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL- 181 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi- 181 (392)
..+++.-- .+| ..|+..+.+|.+...........+..- |..+ ..--..|.+.+++.+.+++-+++
T Consensus 103 ~~~~~al~-------~pG-D~Vlv~~P~Y~~y~~~~~~~g~~~v~v----~~~~--~~~~~~d~~~l~~~i~~~~k~iil 168 (388)
T PRK08443 103 FNVFQALI-------EKG-DEVIIPSPYWVTYPELVKYSGGVPVFI----ETDE--ENGFKITAEQLKKAITPKTKVLVL 168 (388)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHHCCEEEEE----EECC--CCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999980-------999-989982687442399999808847998----6554--348677999999747878739998
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-------EEECCCCCC-CCCCC
Q ss_conf 3332222112462101232211022345721310110034444555310111245453-------021034444-44344
Q gi|254780432|r 182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD-------IMTIAKGMG-GGFPI 253 (392)
Q Consensus 182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD-------i~~~gK~l~-gG~P~ 253 (392)
.-| +.-.|. ..+++-+++|.++|++||+++|.||+...+--.|++-.. ..+.|| +-.+||.++ .|+=+
T Consensus 169 ~~P-~NPTG~-v~s~~~l~~l~~~a~~~~~~ii~DE~Y~~l~~~~~~~~~--~~~~~~~~~~~I~i~S~SK~~~~~G~Ri 244 (388)
T PRK08443 169 NTP-SNPTGS-VYSKEELEAIAKVLKGTDIWVLSDEMYEKLVYDGEFVSV--ASVSEDMFKRTITINGLSKSVAMTGWRF 244 (388)
T ss_pred CCC-CCCCCC-CCCHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCCCH--HHHHCCCCCCEEEECCCCHHCCCCCCCE
T ss_conf 689-899884-764478999999862357567422012432269987888--9972224467899803432005865146
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEE
Q ss_conf 321000-1112222233223453211110012334554320122210112100002688999988679707550464009
Q gi|254780432|r 254 GACLAT-NEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLL 332 (392)
Q Consensus 254 sav~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~ 332 (392)
|.+++. +++.+.+.......+...+.+.-.++.+.++-- .++.+++.++.=+.-++.+.+..++.+++ .-++..|.+
T Consensus 245 G~~~~p~~~l~~~~~~~~~~~~~~~~~~~q~aa~~al~~~-~~~~~~~~~~~~~~~r~~~~~~l~~~~g~-~~~~P~g~~ 322 (388)
T PRK08443 245 GYMASKNKKLIKAMKKLQSQSTSNINSITQKAAIPALNGE-CDKDIEKMRQAFEKRRDLAVDAINAIPGL-SVYKPDGAF 322 (388)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCC-EEECCCEEE
T ss_conf 9998186999999999974467870179999999998545-24789999999999999999998747896-761688347
Q ss_pred -EEEEEC---CCHHHHHHHHH-HCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -998724---99899999999-6898996268----9889955898688999999999999999985
Q gi|254780432|r 333 -IGLKTV---FSPALLAAKFR-DECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 333 -~~ie~~---~~~~~~~~~l~-~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+=+++. .+...+++.+. +.||.+.|.. ++.+|++ +..++++|++++++|.+.+++.
T Consensus 323 ~~w~~~~~~~~d~~~f~~~ll~~~gV~v~PG~~Fg~~g~vRl~--~~~~~e~l~ea~~RL~~~l~~~ 387 (388)
T PRK08443 323 YLFVNIKKIEKDSMKFCKKLLEQEGVAVVPGIGFGMEGYFRLS--FATSIESIKKGIERIANFVKSY 387 (388)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
T ss_conf 9978888889999999999998199999727435889859999--8288999999999999999964
No 120
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.71 E-value=1.7e-15 Score=121.85 Aligned_cols=329 Identities=16% Similarity=0.194 Sum_probs=196.7
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-C-CCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCHHHH
Q ss_conf 764641022674357878999999999999731-4-50687578189999986520101----33312356555403567
Q gi|254780432|r 32 IPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-W-HVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESVECA 105 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~-~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~e~A 105 (392)
...|++.-| .-.+ -..|+|++|+.+.++.. . |.......+.+..+++.+.+..+ .+.++.++++++|...+
T Consensus 29 pDvI~l~~g--~pdf-~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~ 105 (383)
T PRK06348 29 PDIIDLSLG--DPDL-ITDESIIQAAFEDAKKGHTRYTDSTGDKELIEEIINYYKKDYNLSFKENEIMAVVGACHGMYLA 105 (383)
T ss_pred CCEEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHH
T ss_conf 992889996--8899-9889999999999862899889986899999999999999878999767499948989999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-CC
Q ss_conf 77665432001347860023435465654321234553211347999864333222100268875410123322223-33
Q gi|254780432|r 106 IKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI-EP 184 (392)
Q Consensus 106 iklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~-Ep 184 (392)
++.-- .+| +.|+..+-+|.+-........+.... -|..+. .-...|++.+++.+.+++-++++ -|
T Consensus 106 ~~~l~-------~pG-D~Vlv~~P~Y~~y~~~~~~~g~~~v~----~~~~~~--~~~~~d~~~le~~i~~~tk~iil~~P 171 (383)
T PRK06348 106 LQSIL-------DPG-DEVIIHEPYFTPYKDQVEMVGGKPII----FETYEE--DGFQINVDKLEALITSKTKAIILNSP 171 (383)
T ss_pred HHHHC-------CCC-CEEEEECCCCCHHHHHHHHHCCCEEE----CCCCCC--CCCCCCHHHHHHHCCCCCEEEEECCC
T ss_conf 99965-------999-98998069860269999980886253----244566--68657968989856878729998999
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE----EECCCCCC-CCCCCCCCCCC
Q ss_conf 22221124621012322110223457213101100344445553101112454530----21034444-44344321000
Q gi|254780432|r 185 IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDI----MTIAKGMG-GGFPIGACLAT 259 (392)
Q Consensus 185 v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi----~~~gK~l~-gG~P~sav~~~ 259 (392)
..-.|. ..+++.+++|.++|++||+++|.||+...+--.+.+-....+.-.+|- -.+||..+ .|+-+|.+++.
T Consensus 172 -~NPTG~-v~~~e~l~~l~~la~~~~i~visDEiY~~l~~~~~~~p~~~~~~~~~~~I~~~S~SK~~~~~G~RiG~~i~p 249 (383)
T PRK06348 172 -NNPTGA-VFSKETLEEIAKVAIENDLVIISDEVYDGFTFYEDFCPMASLAGMKERTITFGSFSKDFAMTGWRIGYVIAP 249 (383)
T ss_pred -CCCCCC-CCCHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCHHHCCCCCCEEEEEECCHHHCCCCCCEEEEEEEC
T ss_conf -798888-777789999997653068699851433442038999883222566651899921423115888607999827
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEE-EEEE
Q ss_conf 11122222332234532111100123345543201--22210112100002688999988679707550464009-9987
Q gi|254780432|r 260 NEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLL-IGLK 336 (392)
Q Consensus 260 ~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~-~~ie 336 (392)
+++.+.+.....+.+++.+.++..++.+.|+.-++ +.+.+..+++-+++.+.|++ .|.+ .-....|-| +=++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~r~~~~~~~l~~----~~~~-~~~~p~G~~y~w~~ 324 (383)
T PRK06348 250 DYIINTMKNINEGICFSAPTISQRAAIYALKHRDTIVPPIKEEFQKRMEYAYSRIES----IPKL-SLHPPKGSIYAFIN 324 (383)
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH----CCCC-EECCCCEEEEEEEE
T ss_conf 999999999973176668729999999998586999999999999999999999974----8995-76178816799788
Q ss_pred EC---CCHHHHHHHHHH-CCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 24---998999999996-89899626------8988995589868899999999999999
Q gi|254780432|r 337 TV---FSPALLAAKFRD-ECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 337 ~~---~~~~~~~~~l~~-~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
+. .++..+++++.+ .||.+.|. +++.+|++ +..++++|++++++|++.
T Consensus 325 ~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRls--~~~~~~~l~ea~~Rl~k~ 382 (383)
T PRK06348 325 IKKTGLSSVEFCEYLLKEAHVLVIPGKAFGKSGEGYIRLA--CTVGLEELEEAFNRIEKM 382 (383)
T ss_pred CCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--EECCHHHHHHHHHHHHHC
T ss_conf 9999989999999999868999978545488999979999--848999999999999741
No 121
>PRK06375 consensus
Probab=99.71 E-value=1.7e-15 Score=121.77 Aligned_cols=334 Identities=16% Similarity=0.194 Sum_probs=197.1
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-C-CCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731-4-50687578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-W-HVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~-~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
.+|++.|++.-| --.+ ..+|.|++|+.+.++.. . +++.....+.+..+++.+.+..+ .+.++.+ +|+++.
T Consensus 26 ~~G~dvi~l~iG--~pdf-~~P~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~~~i~vt-~~~~~l 101 (381)
T PRK06375 26 KQGKKLYNFGIG--EPDF-TTPDNIIKYAFEMAKSGKTHYTPSAGIPELREKIALKLKSRNNIDAVAKNVLVT-PTKFGI 101 (381)
T ss_pred HCCCCCEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE-CHHHHH
T ss_conf 779970773899--9999-868999999999973799888999986999999999999855999995769985-489999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++..- .+| +.||..+-+|.+.........+++.. -+. ......|++.+++.+.+++-++++
T Consensus 102 ~~~~~~l~-------~pG-D~Vii~~P~Y~~y~~~~~~~g~~~v~----~~~----~~~~~~d~~~l~~~i~~~tk~i~l 165 (381)
T PRK06375 102 NLAMMVIL-------NPG-DEVLIPSPYYVSYPDIVKLAGGKPVF----VDT----DDDYNIDIDNMRKAVTPKTRAIII 165 (381)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCHHHHHHHHHHCCEEEE----EEC----CCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999866-------999-98998188876199999981997764----203----887797999999637867749998
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC--EE--ECCCCCC-CCCCCCCC
Q ss_conf -332222112462101232211022345721310110034444555310111245453--02--1034444-44344321
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD--IM--TIAKGMG-GGFPIGAC 256 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD--i~--~~gK~l~-gG~P~sav 256 (392)
-|- .--|. ..+++-+++|.++|++||+++|.|||...+--.|+.+..-...-..| |+ .+||.++ .|+=+|.+
T Consensus 166 ~nP~-NPTG~-v~s~e~l~~i~~la~~~~i~iIsDEiY~~l~~~g~~~~~~~~~~~~~~~I~~~S~SK~~~~~G~RiG~~ 243 (381)
T PRK06375 166 NNPV-NPTGK-VLSEKEIRELVDFALENNLYIVSDEIYEDLIYRGKLFSPASIPEAFDKTITLNGFSKGYAMTGWRIGYM 243 (381)
T ss_pred CCCC-CCCCC-CCCHHHHHHHHHHHHHCEEEEEECCCHHHHCCCCCCCCHHHHHHHHCCEEEEEHHHHHHHCCCCCEEEE
T ss_conf 9997-98899-999999999999887565899813205755169987785340211065799841022433146555999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEE-
Q ss_conf 0001112222233223453211110012334554320122210112100002688999988679707550464009998-
Q gi|254780432|r 257 LATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGL- 335 (392)
Q Consensus 257 ~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~i- 335 (392)
++.+++++.+.......+...+.++-.++.+.++ +++..++.++.=+.-++.+.+..++.+++ .-.+-.|.++.+
T Consensus 244 i~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~---~~~~~~~~~~~~~~rr~~~~~~l~~~~~~-~~~~P~G~~~~~~ 319 (381)
T PRK06375 244 VAPEEIVEAANKIQQQTITCASSISQYAALRALD---DDESPKHMREEFEKRRDLVVSILKESDNL-HVYEPEGAFYVFP 319 (381)
T ss_pred EECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHCCCC-EEECCCEEEEEEE
T ss_conf 8389999999999975446756299999999962---82779999999999999999998518997-7956781489956
Q ss_pred EECC--CHHHHHHHH-HHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 7249--989999999-9689899626------89889955898688999999999999999985
Q gi|254780432|r 336 KTVF--SPALLAAKF-RDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 336 e~~~--~~~~~~~~l-~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
++.. +...++..+ .+.||.+.|. +++.+|+. +..++++|++++++|.+.++.|
T Consensus 320 ~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~~Ri~--~a~~~e~l~ea~~RL~~~~~~l 381 (381)
T PRK06375 320 GYESDIKSYKAAENLLENKNVVVTPGSAFGRQGEHHFRIS--FATSEDIIKEGIERIGKFFKSI 381 (381)
T ss_pred ECCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
T ss_conf 0799989899999999859999978735488999979999--8199999999999999999859
No 122
>PRK08362 consensus
Probab=99.71 E-value=1.7e-15 Score=121.80 Aligned_cols=335 Identities=16% Similarity=0.171 Sum_probs=194.3
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCC-CCCCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCCCH
Q ss_conf 99764641022674357878999999999999731-4506-87578189999986520101----33-312356555403
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVS-NLYQSTQQEIFANHLIHSTF----AD-RVFFTNSGAESV 102 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~-~~~~~~~~~~la~~L~~~~~----~~-~v~f~~SGseA~ 102 (392)
..++.|++.-| -..+. ..|.|.+|+++.++.. .+++ +....+.+.++++.+.+..+ .+ .++.++++++|.
T Consensus 24 ~~~dvI~l~~g--~pd~~-~p~~i~~a~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~p~~~i~it~G~~~al 100 (389)
T PRK08362 24 GMKDVISLGIG--EPDFD-TPQHIKEYAKEALDKGLTHYGPNIGLPELREAIAEKLKKQNGIEADPKKEIMVLVGANQAF 100 (389)
T ss_pred CCCCEEECCCC--CCCCC-CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHH
T ss_conf 89980899999--79998-7899999999998558768899857099999999999884099999764399818869999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++.-- .+| ..|+..+-+|.+.........+.... -|..+ +.--..|++.+++.+.+++-++++
T Consensus 101 ~~~~~~l~-------~pG-D~Vlv~~P~Y~~y~~~~~~~g~~~v~----vp~~~--~~~~~~d~~~l~~~i~~~~k~iil 166 (389)
T PRK08362 101 LMGLATFL-------KDG-EEVLIPSPMFVSYAPAVILAGGKPVE----VPTYE--ENEFRLNVDDLKKYVTEKTRALII 166 (389)
T ss_pred HHHHHHHC-------CCC-CEEEEECCCCCCHHHHHHHCCCEEEE----EECCC--CCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999975-------899-98998158654268999974998999----85457--778876999999745446829998
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CCCCCCCCCC----EEECCCCCC-CCCCCCC
Q ss_conf -33222211246210123221102234572131011003444455531-0111245453----021034444-4434432
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AYEWANVKPD----IMTIAKGMG-GGFPIGA 255 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~e~~gi~PD----i~~~gK~l~-gG~P~sa 255 (392)
-| +.-.|. ..+++-+++|.++|++||+++|.||+...+--.|.-+ .....+-.+| +-.+||.++ .|+-+|.
T Consensus 167 ~~P-~NPtG~-v~s~~~l~~i~~~a~~~~~~ii~DEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~l~G~RiG~ 244 (389)
T PRK08362 167 NSP-NNPTGS-VLTKKDLEEIADFAVEHDLMVISDEVYEHFIYDGVKHYSIASLDGMFERTITVNGFSKTFAMTGWRLGF 244 (389)
T ss_pred CCC-CCCCCC-CCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCHHHCCCCCCCEEEECCCHHHCCCCCCCEEE
T ss_conf 489-898474-631999999999987549579814645641018977768666045445202303310101687653699
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHH---HHHCCCEEEEECCCEEE
Q ss_conf 100011122222332234532111100123345543201222101121000026889999---88679707550464009
Q gi|254780432|r 256 CLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAI---KNRFPNMFLEVRGQGLL 332 (392)
Q Consensus 256 v~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l---~~~~~~~v~~vRG~Gl~ 332 (392)
+++.+++.+.+.......+...+.+.-.++.+.|+ +....+.+.++-+.+.++.+-+ ..++ + +..++..|.+
T Consensus 245 ~i~~~~~i~~~~~~~~~~~~~~~~~~q~a~~~al~---~~~~~~~~~~~~~~~~~~r~~~~~~l~~~-g-~~~~~P~g~~ 319 (389)
T PRK08362 245 VAAPSWVIEKMVKFQMYNATCPVTFIQYAAAKALR---DERSWKAVEEMRKEYDRRRNLVWKRLNEM-G-LPTVKPKGAF 319 (389)
T ss_pred EECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-CCEECCCEEE
T ss_conf 98089999999999986047886599999999985---97047999998788999999999988875-9-9555788258
Q ss_pred EE-EEEC---CCHHHHHHHHH-HCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99-8724---99899999999-689899626------89889955898688999999999999999985
Q gi|254780432|r 333 IG-LKTV---FSPALLAAKFR-DECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 333 ~~-ie~~---~~~~~~~~~l~-~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+. +++. .+...+++.++ +.||.+.|. +++.+|+. +..++++|++++++|+++++|.
T Consensus 320 ~~w~~~~~~~~~~~~~~~~ll~e~gV~~~PG~~Fg~~~~~~~Rl~--~a~~~e~l~ea~~RL~~~l~e~ 386 (389)
T PRK08362 320 YIFPRIRDTGLTSKEFSELMLKEAKVAVVPGSAFGKAGEGYIRIS--YATAYEKLEEAMDRMEKVLKEK 386 (389)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHC
T ss_conf 994788888989999999999829999986733388998979999--7199999999999999999855
No 123
>PRK03566 consensus
Probab=99.70 E-value=2e-15 Score=121.35 Aligned_cols=321 Identities=18% Similarity=0.258 Sum_probs=203.9
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 764641022674357878999999999999731450687578189999986520101--333123565554035677766
Q gi|254780432|r 32 IPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTA 109 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aikla 109 (392)
++.||+.++ -+.+|-. |.+++|++++++.+. .|..+...+|-+.|.+..+ .+.+..+++.+|+...+++..
T Consensus 32 ~~~i~l~~N--eNp~gp~-~~v~~a~~~~~~~~~----~YPd~~~~~Lr~aiA~~~gv~~~~I~v~~Gs~e~i~l~~~a~ 104 (365)
T PRK03566 32 SDIVKLASN--ENPLGPS-PKALEAIRAALSELH----RYPDGNGFELKAALAEKLGVPPEQITLGNGSNDLLELLARAF 104 (365)
T ss_pred CCEEEEECC--CCCCCCC-HHHHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHH
T ss_conf 887882188--9998989-999999999888616----695966899999999997848667998778999999999985
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC-CCCCCCC
Q ss_conf 543200134786002343546565432123455321134799986433322210026887541012332222-3332222
Q gi|254780432|r 110 RRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL-IEPIQGE 188 (392)
Q Consensus 110 r~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi-~Epv~g~ 188 (392)
- .+| +.|+..+.+|-.-...+......... - |. .++ -.|++.+.+.+.++.-.++ ..|= .-
T Consensus 105 ~-------~pG-d~Vl~~~P~y~~Y~~~~~~~g~~~~~-v---p~-~~~----~~dl~~l~~~i~~~~klv~l~nPn-NP 166 (365)
T PRK03566 105 L-------GPG-DEIIYSQYAFAVYPLATQAVGARAVE-V---PA-KDY----GHDLEAMLAAITPKTRLVFIANPN-NP 166 (365)
T ss_pred C-------CCC-CEEEECCCCHHHHHHHHHHCCCEEEE-E---CC-CCC----CCCHHHHHHHCCCCCCEEEECCCC-CC
T ss_conf 5-------899-87676688668999999981974899-6---17-676----769588998638888689977999-98
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCC
Q ss_conf 11246210123221102234572131011003444455531-011124545302---1034444-443443210001112
Q gi|254780432|r 189 GGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AYEWANVKPDIM---TIAKGMG-GGFPIGACLATNEVA 263 (392)
Q Consensus 189 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~ 263 (392)
.|. ..+++-++++.+.|.++ +++|+||....|..-+... +....+--|.++ +|||..+ .|+-+|.+++++++.
T Consensus 167 TG~-~~~~~~l~~l~~~~~~~-~~vV~DEaY~ef~~~~~~~~~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~ia~~~li 244 (365)
T PRK03566 167 TGT-FLSAAELEAFLAKVPPD-VLVVLDEAYTEYAAPEERPDSLAWLKKYPNLVVSRTFSKAYGLAGLRVGYAVSNPEIA 244 (365)
T ss_pred CCC-CCCCHHHHHHHHHCCCC-CEEEEECCHHHHCCCCCCCCHHHHHHHCCCEEEEEECCHHCCCCCHHHEEEECCHHHH
T ss_conf 877-35706589999754567-4498524577750477777788876413772598545452057573014101699999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCHHH
Q ss_conf 22223322345321111001233455432012221011210000268899998867970755046400999872499899
Q gi|254780432|r 264 ACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSPAL 343 (392)
Q Consensus 264 ~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~~ 343 (392)
+.+.... ..|+-|.++..||.+.|+ +++++++..+.-+.-++.+.+..+++ ++ .-+-..|.++-+++..+...
T Consensus 245 ~~l~~~~--~p~~vn~~aq~aa~aaL~---~~~~~~~~~~~~~~~r~~l~~~L~~~-g~-~~~ps~~nF~l~~~~~~~~~ 317 (365)
T PRK03566 245 DLLNRVR--QPFNVNSLALAAAVAALD---DDDFLAKSRELNRAGMQQLEAGFDAL-GL-EYIPSKGNFVTVDVGRDAAA 317 (365)
T ss_pred HHHHHHC--CCCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CC-EECCCCCEEEEEECCCCHHH
T ss_conf 9999961--888977999999999958---99999999999998999999999978-79-88789980899978999999
Q ss_pred HHHHHHHCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999996898996268----988995589868899999999999999998
Q gi|254780432|r 344 LAAKFRDECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 344 ~~~~l~~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
+.++++++|+++++.. ++.+|++ +=|.+|.++++++|++.|.|
T Consensus 318 l~~~L~~~gV~Vrp~~~fgl~~~lRis---~g~~een~~l~~aL~~il~e 364 (365)
T PRK03566 318 IYQALLRQGVIVRPVAGYGMPNHLRVS---IGLPEENARFLAALKKVLAE 364 (365)
T ss_pred HHHHHHHCCEEEEECCCCCCCCEEEEE---ECCHHHHHHHHHHHHHHHCC
T ss_conf 999999779189868989998979999---58999999999999998766
No 124
>PRK08069 consensus
Probab=99.70 E-value=3.1e-15 Score=120.06 Aligned_cols=333 Identities=15% Similarity=0.171 Sum_probs=197.8
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731--450687578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL--WHVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~--~~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
..|++.|++.-|. -.+. ..|.|++|+.++++.. .|.......+.++.+++.+.+..+ .+.++.++++++|.
T Consensus 27 ~~g~~vi~l~~G~--pdf~-~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lreaia~~~~~~~g~~~~p~~V~it~G~~~al 103 (390)
T PRK08069 27 AEGHDVIGLGAGE--PDFN-TPEHIIDAAHKAMNEGHTKYTPSGGLQALKQEIVKKFKRDQGLAYDPSEIIVCTGAKHAL 103 (390)
T ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHH
T ss_conf 7699847899978--9999-889999999999854899898996729999999999999868998811189878889999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++.-- .+| +.||..+.+|.+.........+.+.+. |..+. .-...|++.+++.+.+++-++++
T Consensus 104 ~~~~~~l~-------~pG-D~Vlv~~P~Y~~y~~~~~~~g~~~v~v----~~~~~--~~~~~d~~~l~~~i~~~~k~iil 169 (390)
T PRK08069 104 YTLFQVLL-------DEG-DEVIIPTPYWVSYPEQVKLAGGKPVYV----EGLED--NDFKITAEQLEEAITEKTKAVII 169 (390)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHHCCEEEEE----CCCCC--CCCCCCHHHHHHHCCCCCCEEEE
T ss_conf 99999727-------998-989980686642799999818804871----45666--78767999999854436858998
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-------EEECCCCCC-CCCCCC
Q ss_conf 332222112462101232211022345721310110034444555310111245453-------021034444-443443
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD-------IMTIAKGMG-GGFPIG 254 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD-------i~~~gK~l~-gG~P~s 254 (392)
-.=..-.|. ..+++.+++|.++|++||+++|.||+...+--.|.-+-+ ...+.|+ +-.+||..+ .|+=+|
T Consensus 170 ~~P~NPTG~-v~s~e~l~~i~~la~~~~~~vi~DEiY~~l~~~~~~~~s-~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG 247 (390)
T PRK08069 170 NSPSNPTGM-IYTKEELAALGEVCLEHDILIVSDEIYEKLIYGGAEHVS-IAQLSNELKEQTIIINGVSKSHSMTGWRIG 247 (390)
T ss_pred CCCCCCCCC-CCCCHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCC-HHHHCCCCCCCCCEECCCHHHCCCCCCCEE
T ss_conf 899698681-655068999999987563059853323654069989889-899495434564100353020377632358
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHH---HHCCCEEEEECCCEE
Q ss_conf 21000111222223322345321111001233455432012221011210000268899998---867970755046400
Q gi|254780432|r 255 ACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIK---NRFPNMFLEVRGQGL 331 (392)
Q Consensus 255 av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~---~~~~~~v~~vRG~Gl 331 (392)
.+++.+++++.+.......+...++++-.++.+.++. .++.+++.+ +.++++.+.+. .+.|++ .-++-.|-
T Consensus 248 ~~~~~~~li~~~~~~~~~~~~~~~~~~q~aa~~a~~~--~~~~~~~~~---~~~~~r~~~~~~~l~~~~g~-~~~~P~Gg 321 (390)
T PRK08069 248 YAAGNKQIIKAMTNLASHSTSNPTSIAQYGAIAAYAG--SQEPVETMR---QAFEERLNIIYDKLIQIPGF-TCIKPQGA 321 (390)
T ss_pred EEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC--CHHHHHHHH---HHHHHHHHHHHHHHHHCCCC-CCCCCCEE
T ss_conf 8766999999999998653577763999999999868--868799999---99999999999998506688-51479803
Q ss_pred EEE-EEEC--------CCHHHHHHHH-HHCCEEEEEC----CCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 999-8724--------9989999999-9689899626----898899558986889999999999999999
Q gi|254780432|r 332 LIG-LKTV--------FSPALLAAKF-RDECLLTAPS----SDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 332 ~~~-ie~~--------~~~~~~~~~l-~~~Gll~~~~----~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
++. +++. .+...+++++ .+.||.+.|. .++.+|+. +..++++|++++++|++.++
T Consensus 322 ~ylw~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~Rl~--fa~~~~~l~eal~RL~~~l~ 390 (390)
T PRK08069 322 FYLFPNVKEAAALSGFETVDEFVKALLEEEKVALVPGSGFGAPDNVRLS--YATSLELLEEAIERIHRFMK 390 (390)
T ss_pred EEEEEECCHHHCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEE--EECCHHHHHHHHHHHHHHHC
T ss_conf 8997877311122678889999999998599999818767999838999--84999999999999999859
No 125
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.69 E-value=8.9e-15 Score=117.08 Aligned_cols=333 Identities=12% Similarity=0.144 Sum_probs=200.4
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCC-CCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731-4506-87578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVS-NLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~-~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
..|++.|++.-|- -.+ --.|.|++|++++++.. .+++ .....+.+.++++.+....+ .+.++.++++++|.
T Consensus 30 ~~G~dvi~L~iG~--pdf-~~p~~i~~a~~~al~~~~~~Y~~~~G~~eLReAia~~~~~~~g~~v~p~~I~vt~G~~~al 106 (402)
T PRK06107 30 AAGRSIVDLTVGE--PDF-DTPDHIKAAAVAAIERGETKYTLVNGTPALRKAIIAKMERRNGLHYADNEICVGGGAKQAI 106 (402)
T ss_pred HCCCCEEECCCCC--CCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHH
T ss_conf 7799727788989--899-9789999999999855999996998889999999999999868999820499868889999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++..- .+| ..||..+-.|.+.........+.+.. -|..+. .-...|.+.+++.+.+++-++|+
T Consensus 107 ~~~~~al~-------~pG-D~Vlv~~P~Y~~y~~~~~~~g~~~~~----~p~~~~--~~~~~d~d~le~~~~~~tk~iil 172 (402)
T PRK06107 107 FLALMATL-------EEG-DEVIIPAPYWVSYPDMVLANDGTPVI----VPCPEE--DGFKLTAEALEAAITPRTRWLIL 172 (402)
T ss_pred HHHHHHHC-------CCC-CEEEEECCCCCCHHHHHHHCCCCEEE----CCCCCC--CCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999957-------999-98998168665379999983995673----687823--48758999999745647669998
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCC-CCEEEECCCCCCCCCCCCCCCCCCCCCCCC-----E--EECCCCCC-CCCC
Q ss_conf -332222112462101232211022345-721310110034444555310111245453-----0--21034444-4434
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDI-DALLIFDEVQTGYGRTGKLFAYEWANVKPD-----I--MTIAKGMG-GGFP 252 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GRtG~~f~~e~~gi~PD-----i--~~~gK~l~-gG~P 252 (392)
-| ..-.|. ..+++-+++|.++|.+| ++++|.||+...+--.|..+.+ .....|+ | -.+||..+ .|+=
T Consensus 173 ~~P-~NPTG~-v~s~~~l~~i~~i~~~~~~i~iisDEiY~~l~~~~~~~~~-~~~~~p~~~~~~i~i~s~SK~~~~~G~R 249 (402)
T PRK06107 173 NAP-SNPTGA-AYSRDELRALADVLLRHPHVLVLTDDIYDHIRFDDEPVTH-LLTAAPELRDRVLLTNGVSKTYAMTGWR 249 (402)
T ss_pred CCC-CCCCCC-CCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHEECCCCCCC-HHHHCHHHHCCCEEECCCCCCCCCCCCE
T ss_conf 899-898996-6534899999887752489328622202552218988886-8985824422544742453456776622
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH----HHHHCCHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 432100011122222332234532111100123345543201222101----1210000268899998867970755046
Q gi|254780432|r 253 IGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN----VINIAKILFEGLTAIKNRFPNMFLEVRG 328 (392)
Q Consensus 253 ~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~~v~~vRG 328 (392)
+|.+++.+++++.+.......++..+++.-.++.+.|+. .+++++. .+++-+.+.+.|+ +.+++ .-++-
T Consensus 250 iG~~v~~~~li~~l~~~~~~~~~~~~~~~Q~aa~~aL~~--~~~~~~~~~~~y~~rrd~~~~~l~----~~~g~-~~~~P 322 (402)
T PRK06107 250 IGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNG--DQSFVAESVKVYKQRRDYALERLN----AIPGL-SCLVP 322 (402)
T ss_pred EEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHH----HCCCC-EECCC
T ss_conf 689985899999999996243468989999999999968--847899999999999999999887----57996-76279
Q ss_pred CEEEEEE-EE-------------CCCHHHHHHHHH-HCCEEEEEC----CCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 4009998-72-------------499899999999-689899626----8988995589868899999999999999998
Q gi|254780432|r 329 QGLLIGL-KT-------------VFSPALLAAKFR-DECLLTAPS----SDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 329 ~Gl~~~i-e~-------------~~~~~~~~~~l~-~~Gll~~~~----~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
.|.++.+ ++ ..++..++.++. +.||.+.|. .++.+||. +..++++|++++++|++++.+
T Consensus 323 ~g~~y~~~d~~~~~~~~~p~~~~~~~~~~f~~~ll~~~gV~v~PG~~FG~~~~~Ri~--fa~~~e~L~ea~~Rl~~al~~ 400 (402)
T PRK06107 323 DGAFYLYVNCAGLIGKTTPEGKVLETDTDVVLYLLDSVGVAVVQGTAYGLSPYFRMS--IATSLETLEAGCDRIERAVAA 400 (402)
T ss_pred CEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHH
T ss_conf 812798130510034458665665688999999998589999778533899829999--719999999999999999996
Q ss_pred H
Q ss_conf 5
Q gi|254780432|r 390 L 390 (392)
Q Consensus 390 L 390 (392)
|
T Consensus 401 l 401 (402)
T PRK06107 401 L 401 (402)
T ss_pred C
T ss_conf 4
No 126
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.69 E-value=3.5e-15 Score=119.72 Aligned_cols=321 Identities=19% Similarity=0.259 Sum_probs=204.1
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 76464102267435787899999999999973145068757818999998652010--1333123565554035677766
Q gi|254780432|r 32 IPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHST--FADRVFFTNSGAESVECAIKTA 109 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~--~~~~v~f~~SGseA~e~Aikla 109 (392)
++.||+.++ -+.+|-. |.+++|+.++++.+. .|..+...+|-+.+.+.. ..+.+..+|+.+|+...+++.-
T Consensus 32 ~~ii~l~~N--enp~gp~-~~v~~ai~~~~~~~~----~YPd~~~~~Lr~aiA~~~~v~~~~Ilv~nGs~e~i~l~~~a~ 104 (367)
T PRK02731 32 ADIIKLASN--ENPLGPS-PKAIEAIRAAADELH----RYPDGSGFELKAALAEKFGVDPEQIILGNGSDEILELLARAY 104 (367)
T ss_pred CCEEEECCC--CCCCCCC-HHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHH
T ss_conf 876881198--9999989-999999998775511----595987899999999997858111998578999999999998
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC-CCCCCCC
Q ss_conf 543200134786002343546565432123455321134799986433322210026887541012332222-3332222
Q gi|254780432|r 110 RRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL-IEPIQGE 188 (392)
Q Consensus 110 r~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi-~Epv~g~ 188 (392)
- .+| +.|+..+.+|..-...+......... -|. .++ ..|++++.+.+.+++..++ .-|=. -
T Consensus 105 ~-------~pg-d~Vl~~~P~f~~Y~~~a~~~G~~~~~----vp~-~~~----~~d~~~l~~~i~~~tklv~l~nPnN-P 166 (367)
T PRK02731 105 L-------GPG-DEVIYSEHAFAVYPIAAQAVGAKPVE----VPA-KDY----GHDLDAMLAAVTPRTKLVFIANPNN-P 166 (367)
T ss_pred H-------CCC-CEEEECCCCHHHHHHHHHHCCCEEEE----ECC-CCC----CCCHHHHHHHCCCCCCEEEECCCCC-C
T ss_conf 4-------799-86444798626899999982988999----547-677----6596899985587886899828999-9
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC-CCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCC
Q ss_conf 112462101232211022345721310110034444555310-11124545302---1034444-443443210001112
Q gi|254780432|r 189 GGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFA-YEWANVKPDIM---TIAKGMG-GGFPIGACLATNEVA 263 (392)
Q Consensus 189 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~-~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~ 263 (392)
-|. ..+.+-++++.+.|++ ++++|+||+..-|..-+.... .+..+--|.++ +|||..+ .|+=+|.+++.+++.
T Consensus 167 TG~-~~~~~~l~~l~~~~~~-~~~vviDEaY~ef~~~~~~~~~~~l~~~~~n~iv~rSfSK~~glaGlRlGy~ia~~~~i 244 (367)
T PRK02731 167 TGT-YLPAEEVERFLAGVPP-DVLVVLDEAYAEYVARKDYEDGIELVKEFPNVVVTRTFSKAYGLAGLRVGYGIAPPEII 244 (367)
T ss_pred CCC-CCCHHHHHHHHHHCCC-CCEEEEEHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCHHHCCCCCCEEEEECCHHHH
T ss_conf 886-5756999999985455-76388411267642576665589997623764799746666516887058886699999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEC--CCH
Q ss_conf 222233223453211110012334554320122210112100002688999988679707550464009998724--998
Q gi|254780432|r 264 ACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTV--FSP 341 (392)
Q Consensus 264 ~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~--~~~ 341 (392)
+.+.... ..|+-|.++..+|.++|+ +++.+++..+.-+.-++.+.+...++ ++ .-....|.++-+++. .+.
T Consensus 245 ~~l~~~~--~p~~v~~~aq~aa~aaL~---d~~~~~~~~~~~~~~r~~l~~~L~~~-g~-~~~ps~~nFil~~~~~~~~a 317 (367)
T PRK02731 245 DALNRVR--QPFNVNSLALAAAVAALD---DDAFVEKSRELNAKGMARLEEFLAEL-GL-EYIPSYGNFILVDFDDGKDA 317 (367)
T ss_pred HHHHHHH--CCCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CC-EECCCCCEEEEEECCCCCCH
T ss_conf 9999984--766588999999999966---99999999999999999999999978-49-88789861899988999999
Q ss_pred HHHHHHHHHCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999996898996268----988995589868899999999999999998
Q gi|254780432|r 342 ALLAAKFRDECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 342 ~~~~~~l~~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
..+.++|.++|+++++.. ++.+|++ +=|.+|.++++++|++.|.|
T Consensus 318 ~~~~~~L~~~gI~vr~~~~fgl~~~~Ris---igt~een~~li~al~~~l~e 366 (367)
T PRK02731 318 AAIYEALLKRGVIVRPLAGYGLPNALRIT---IGTPEENRRFLAALKEFLAQ 366 (367)
T ss_pred HHHHHHHHHCCEEEEECCCCCCCCEEEEE---ECCHHHHHHHHHHHHHHHHH
T ss_conf 99999999689389858888998969999---28999999999999999850
No 127
>PRK07337 aminotransferase; Validated
Probab=99.69 E-value=4.5e-15 Score=119.03 Aligned_cols=328 Identities=12% Similarity=0.160 Sum_probs=197.3
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCCC-CCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731-45068-7578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVSN-LYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~~-~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
..|++.|++.-| -..+. ..|.|++|+++.++.. ..++. ....+.++.+++.+.+..+ .+.+++++++++|.
T Consensus 27 ~~G~dvi~l~~g--~pdf~-~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lreaia~~~~~~~g~~i~pe~I~it~G~~~al 103 (388)
T PRK07337 27 RAGRDIIHMGIG--EPDFT-APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAHYARRFGLDVAPERIVVTAGASAAL 103 (388)
T ss_pred HCCCCEEECCCC--CCCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHH
T ss_conf 779980899799--89998-799999999999846999889998879999999999999868999668879848759999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++.-- .+| ..|+..+-+|...........+....- |..+ ..--..|.+.+++.+.+++-++++
T Consensus 104 ~~~~~~l~-------~pG-D~Vlv~~P~Yp~~~~~~~~~g~~~~~v----p~~~--~~~~~~d~~~l~~~~~~~tk~iil 169 (388)
T PRK07337 104 LLACLALV-------ERG-DEVLMPDPSYPCNRHFVAAAEGRPVLV----PSGP--AERFQLTADDVRTHWGERTRGVLL 169 (388)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCHHHHHHHHHCCCEEEEE----ECCC--CCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999966-------999-989985887365999999739889994----0371--006778979999857865539997
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCC
Q ss_conf -33222211246210123221102234572131011003444455531011124545302---1034444-443443210
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACL 257 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~ 257 (392)
-| +.-.|. ..+++-++++.++|++|++++|.|||...+.-.|..... .....+.+ .+||.++ .|+=+|.++
T Consensus 170 ~nP-~NPtG~-v~s~~el~~i~~~a~~~~~~vIsDEiY~~l~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~i 245 (388)
T PRK07337 170 ASP-SNPTGT-SIEPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSA--LSLGDDVITINSFSKYFNMTGWRLGWLV 245 (388)
T ss_pred CCC-CCCCCE-EEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC--CCCCCCEEEECCCCCCCCCCCCCEEEEE
T ss_conf 899-798885-626777433554431458088457641001248998671--0057857998266545578661569999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC------CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEE
Q ss_conf 001112222233223453211110012334554320122------21011210000268899998867970755046400
Q gi|254780432|r 258 ATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDG------FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGL 331 (392)
Q Consensus 258 ~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~------l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl 331 (392)
+.+++.+.+.......+...+.++..++.+.++ .+. ..+..+++-+.+.+.|+++ + ....++-.|.
T Consensus 246 ~p~~li~~~~~~~~~~~~~~~~~~q~aa~~~~~---~~~~~~~~~~~~~~~~~r~~~~~~l~~~----~-~~~~~~P~G~ 317 (388)
T PRK07337 246 VPPALVGTFEKLAQNLFICASALAQHAALACFE---PDTLAIYERRRAEFKRRRDFIVPALESL----G-FKVPVMPDGA 317 (388)
T ss_pred ECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHHHC----C-CCCCCCCCEE
T ss_conf 889999999999985458866999999999848---2247999999999999999999999975----9-9646578826
Q ss_pred EEE-EEE-------CCCHHHHHHHHH-HCCEEEEEC-------CCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999-872-------499899999999-689899626-------89889955898688999999999999999
Q gi|254780432|r 332 LIG-LKT-------VFSPALLAAKFR-DECLLTAPS-------SDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 332 ~~~-ie~-------~~~~~~~~~~l~-~~Gll~~~~-------~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
++. +++ ..+...++..+. +.||.+.|. +++.+||. +..++++|++++++|.+.|
T Consensus 318 ~~~w~d~~~~~~~~~~d~~~~~~~ll~e~gV~v~PG~~Fg~~~~~~~iRl~--~a~~~~~l~eal~RL~~~l 387 (388)
T PRK07337 318 FYVYADCGGVAHPAAGDSAALTFAMLHDAGVVLVPGMDFGPHAPRDYIRLS--YATSYSRLEEAVARLGKLF 387 (388)
T ss_pred EEEEEECHHHCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHH
T ss_conf 699478642169999999999999998599999776221899999979999--7199999999999999970
No 128
>PRK07550 hypothetical protein; Provisional
Probab=99.68 E-value=5.8e-15 Score=118.29 Aligned_cols=327 Identities=18% Similarity=0.210 Sum_probs=198.0
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC---CCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCC
Q ss_conf 7997646410226743578789999999999997314---50687578189999986520101----3331235655540
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW---HVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAES 101 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~---~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA 101 (392)
..|++.||+.-| .-.+. ..|.|++|+.+.+..-. |.......+.+..+++.+.+..+ .+.++.++++++|
T Consensus 27 ~~G~~vI~L~~G--~Pdf~-~p~~i~~a~~~a~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~pe~I~it~G~~~a 103 (387)
T PRK07550 27 PAGRPLIDLSQA--VPVYP-PPPELRRALAEAAGDPAAHLYGPVEGLPELREAYAAQYSRLYGAAINPGQVAITSGCNQA 103 (387)
T ss_pred CCCCCEEECCCC--CCCCC-CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHH
T ss_conf 699971589898--89898-789999999999669888889898571999999999999986889967988987678999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 35677766543200134786002343546565432123455321134799986433322210026887541012332222
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
...+++.-- .+| +.|+..+-+|.+.............. -|..+ ..-...|++.+++.+.+++-+++
T Consensus 104 l~~~~~al~-------~pG-D~Vli~~P~Y~~y~~~~~~~G~~~~~----vp~~~--~~~~~~d~~~le~~~~~~tk~ii 169 (387)
T PRK07550 104 FWAAMVTLA-------GAG-DEVILPTPWYFNHKMWLDMLGIRAVL----VPLDT--GPGLLPDPEAAAALITPRTRAIV 169 (387)
T ss_pred HHHHHHHHC-------CCC-CEEEEECCCCCCHHHHHHHCCCEEEE----CCCCC--CCCCCCCHHHHHHHCCCCCCEEE
T ss_conf 999999971-------898-98998279675379999976998973----47775--67987799999975565783770
Q ss_pred C-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC-CCCCCCCCCCCC-------EEECCCCCC-CCC
Q ss_conf 3-332222112462101232211022345721310110034444555-310111245453-------021034444-443
Q gi|254780432|r 182 I-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK-LFAYEWANVKPD-------IMTIAKGMG-GGF 251 (392)
Q Consensus 182 ~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~-~f~~e~~gi~PD-------i~~~gK~l~-gG~ 251 (392)
+ -| ..--|. ..+++.+++|.++|++||+++|.||+...|-..+. .... + -.|| +-.+||.++ .|+
T Consensus 170 l~~P-~NPtG~-v~s~e~l~~l~~la~~~~~~iI~DEiY~~~~~~~~~~~~~--~-~~~~~~~~vI~i~S~SK~~~~~G~ 244 (387)
T PRK07550 170 LVTP-NNPTGV-VYPPELLHELYDLARRRGLALILDETYRDFDSRGGAPHDL--F-ADPDWGDTLVHLYSFSKAYRLTGH 244 (387)
T ss_pred CCCC-CCCCCC-CCCHHHHHHHHHHCCCEEEEEEECCCHHHHHCCCCCCCCH--H-HCCCCCCEEEEECCCCCCCCCCCC
T ss_conf 3899-699885-1077985346543033158999417578753388777667--6-533667559997467644567542
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 4432100011122222332234532111100123345543201--22210112100002688999988679707550464
Q gi|254780432|r 252 PIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQ 329 (392)
Q Consensus 252 P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~ 329 (392)
=+|.+++.+++++.+.......+...+.++-.++.+.|+...+ ++.....+++-+.+.+.|+ +.+.. .+...
T Consensus 245 RiG~i~~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~rr~~l~~~l~----~~~~~--~~~~~ 318 (387)
T PRK07550 245 RVGALAASPARLAEIEKFLDTMAICAPRIGQIAVLWGIRNLADWVAGNRAEILRRRDALRAGFS----RLPGW--ELLAS 318 (387)
T ss_pred EEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH----HCCCC--EECCC
T ss_conf 1799983999999999999760367877999999999863099999999999999999999886----46896--54788
Q ss_pred EEEEE-EEE---CCCHHHHHHHH-HHCCEEEEEC------CCCEEEECCCCC-CCHHHHHHHHHHHHH
Q ss_conf 00999-872---49989999999-9689899626------898899558986-889999999999999
Q gi|254780432|r 330 GLLIG-LKT---VFSPALLAAKF-RDECLLTAPS------SDNVVRILPPLT-ITAEEIHEGLERIER 385 (392)
Q Consensus 330 Gl~~~-ie~---~~~~~~~~~~l-~~~Gll~~~~------~~~~irl~Ppl~-it~~eid~~i~~l~~ 385 (392)
|.++. +++ ..+...++.++ .+.||.+.|. +.+.+|++ +. .++++|++++++|++
T Consensus 319 G~~f~w~~~~~~~~~~~~~~~~ll~e~gV~v~PG~~Fg~~g~~~vRls--fa~~~~~~i~ea~~RL~~ 384 (387)
T PRK07550 319 GAYFAYVRHPFPDASSDEVARRLAKEAGILCLPGTMFGPGGERYLRLA--FANIDVAGIAELVERLRG 384 (387)
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--ECCCCHHHHHHHHHHHHH
T ss_conf 347998837889989999999999869999978753388998979999--467999999999999986
No 129
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.68 E-value=6e-15 Score=118.21 Aligned_cols=335 Identities=17% Similarity=0.169 Sum_probs=198.5
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCHH
Q ss_conf 99764641022674357878999999999999731--450687578189999986520101----333123565554035
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL--WHVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESVE 103 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~--~~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~e 103 (392)
.++..|++.-| -..+ -..|.|++|+++.++.. .+.......+.+..+++.+.+..+ .|.++.++++++|..
T Consensus 22 ~~~dvi~l~vg--dpDf-~~p~~i~~a~~~~~~~g~~~Y~~~~G~~~lreaia~~~~~~~g~~v~~d~I~it~G~~~al~ 98 (382)
T PRK06108 22 GREDVLPFWFG--ESDL-PTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGATTPPERIAVTSSGVQALM 98 (382)
T ss_pred CCCCCEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHH
T ss_conf 89991788898--9899-98899999999998479983799988699999999999998788986684998078999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-
Q ss_conf 6777665432001347860023435465654321234553211347999864333222100268875410123322223-
Q gi|254780432|r 104 CAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI- 182 (392)
Q Consensus 104 ~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~- 182 (392)
.+++.-- .+| ..|+..+-+|.+.............. -|.... ..-..-|++.+++.+.+++-++++
T Consensus 99 ~~~~~~~-------~pG-D~Vlv~~P~Y~~~~~~~~~~g~~~~~----vpl~~~-~~~~~~d~~~le~~~~~~~k~iil~ 165 (382)
T PRK06108 99 LAAQALV-------GPG-DEVVAVTPAWPNLVAAPKILGARVVC----VPLQYG-GGGWQLDVDRLLAAITPRTRALFIN 165 (382)
T ss_pred HHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHCCCEEEE----CCCCCC-CCCCCCCHHHHHHHCCCCCEEEEEC
T ss_conf 9999966-------999-98998168786569999973882785----345666-7886679999996457566499988
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC--C-CCCCCCCCE---EECCCCCC-CCCCCCC
Q ss_conf 332222112462101232211022345721310110034444555310--1-112454530---21034444-4434432
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFA--Y-EWANVKPDI---MTIAKGMG-GGFPIGA 255 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~--~-e~~gi~PDi---~~~gK~l~-gG~P~sa 255 (392)
-| ..-.|. ..+++-+++|.++|++||+.+|.|||..-+--.|.... + +..+...-+ ..+||..+ .|+=+|.
T Consensus 166 ~P-~NPtG~-v~s~e~l~~l~~la~~~~v~iisDEiY~~l~f~~~~~~ps~~~~~~~~~~~i~~~S~SK~f~~~G~RiG~ 243 (382)
T PRK06108 166 SP-NNPTGW-TASRDDQQAILAHCRRHGLWIVADEVYERLYYGGGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGW 243 (382)
T ss_pred CC-CCCCCH-HCCHHHHHHHHHHHHCCCCEEECHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEECCCHHCCCCCCEEEE
T ss_conf 99-699662-0447889999998762697535334333301389988834665236676499980430310476761799
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEE
Q ss_conf 100011122222332234532111100123345543201--222101121000026889999886797075504640099
Q gi|254780432|r 256 CLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLI 333 (392)
Q Consensus 256 v~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~ 333 (392)
+++.+++.+.+.......+...+.+.-.++.+.++.-++ +++.++.++.-+.+.+.|++ .|++ .-+.-.|.++
T Consensus 244 ii~~~~~~~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~~r~~l~~~l~~----~~~~-~~~~P~g~~y 318 (382)
T PRK06108 244 LVAPPSLGQDLEKLIEYNTSCVPQFVQRAAVAALDEGEDFVAQLVARLRRARDHLVDALRA----LPGV-EVPKPDGAMY 318 (382)
T ss_pred EEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH----CCCC-EECCCCEEEE
T ss_conf 9979999999999998703777689999999999686265899999999999999999973----7996-8737882799
Q ss_pred -EEEEC--CCHHHHHHHHH-HCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -98724--99899999999-689899626------8988995589868899999999999999998
Q gi|254780432|r 334 -GLKTV--FSPALLAAKFR-DECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 334 -~ie~~--~~~~~~~~~l~-~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
=+++. .+...++.++. +.||.+.|. +.+.+||. |..++++|++++++|++.+.+
T Consensus 319 ~w~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~--~a~~~~~l~eal~RL~~~l~k 382 (382)
T PRK06108 319 AFFRLDGATDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWC--FARDPARLDEGVERLRRFLAR 382 (382)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHCC
T ss_conf 9887999999999999999969999987841188999979999--629999999999999999667
No 130
>KOG1360 consensus
Probab=99.68 E-value=1.4e-15 Score=122.30 Aligned_cols=310 Identities=18% Similarity=0.224 Sum_probs=199.3
Q ss_pred CCCCC-CHHHHHHHHHHHHHCCCCC-----CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCC
Q ss_conf 57878-9999999999997314506-----875781899999865201013331235655540356777-6654320013
Q gi|254780432|r 45 SLGHS-HPELVAILKSQSEKLWHVS-----NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIK-TARRYHYMAG 117 (392)
Q Consensus 45 ~lGh~-~p~i~~a~~~q~~~~~~~~-----~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aik-lar~~~~~~g 117 (392)
-||.+ ||+|.+|+++.+++..-.. ...++...++|.++|.+....+-++...|=--|||+.+- +++..
T Consensus 181 YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~l----- 255 (570)
T KOG1360 181 YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKL----- 255 (570)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHC-----
T ss_conf 213347827999999999971888677654677871355599999988467610355421341645899999778-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC---CCCCCCCC-CCCCCCCCCCCC
Q ss_conf 47860023435465654321234553211347999864333222100268875410---12332222-333222211246
Q gi|254780432|r 118 KTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQI---SNDTAAIL-IEPIQGEGGVRK 193 (392)
Q Consensus 118 ~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~---~~~iAavi-~Epv~g~~G~~~ 193 (392)
++ ..|.+-++. |- + ++.|..+- ..+. ....+||+++|++.+ +..+.-+| +|+|.++.|.+-
T Consensus 256 -pg-cei~SD~gN-HA----S-MI~GIrns------~v~K-~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavc 320 (570)
T KOG1360 256 -PG-CEIFSDEGN-HA----S-MIQGIRNS------RVPK-HIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVC 320 (570)
T ss_pred -CC-CEEECCCCC-HH----H-HHHHHHHC------CCCC-EEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
T ss_conf -99-688536653-38----8-88776515------9752-242469989999999757988882688766402677757
Q ss_pred CCHHHHHHHHCCCCCCCCEEEECCCCC-CCCCCCCCC-CC-CCCCC--CCCEE--ECCCCCCC--CCCCCCCCCCCCCCC
Q ss_conf 210123221102234572131011003-444455531-01-11245--45302--10344444--434432100011122
Q gi|254780432|r 194 VPEEFLQQLRKICDDIDALLIFDEVQT-GYGRTGKLF-AY-EWANV--KPDIM--TIAKGMGG--GFPIGACLATNEVAA 264 (392)
Q Consensus 194 ~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GRtG~~f-~~-e~~gi--~PDi~--~~gK~l~g--G~P~sav~~~~~i~~ 264 (392)
| +++|.++.++||++.-+|||-. |+ .|.-- +. |..|+ +-||+ |+||+.|+ || +..++++.|
T Consensus 321 p----leelcDvah~yGAiTFlDEVHAVGl--YG~rGaGvgerdGvm~kvDiIsGTLgKafGcVGGY----IAat~~LvD 390 (570)
T KOG1360 321 P----LEELCDVAHKYGAITFLDEVHAVGL--YGPRGAGVGERDGVMHKVDIISGTLGKAFGCVGGY----IAATRKLVD 390 (570)
T ss_pred C----HHHHHHHHHHHCCEEEEEHHHHHCC--CCCCCCCCCCCCCCCHHHHHCCCCHHHHCCCCCCE----EHHHHHHHH
T ss_conf 7----8999778877175453101231002--15777876656775203220014045541665423----300446999
Q ss_pred CCCCCCCC--CCCCCCCCCHHHHHHHHHHHHCC--CCCCHHHHH-CCHHHHHHHHHHH---HCCCEEEEECCCEEEEEEE
Q ss_conf 22233223--45321111001233455432012--221011210-0002688999988---6797075504640099987
Q gi|254780432|r 265 CMNQGSHG--STYGGNVLAMVLGEKVLNIIQSD--GFLENVINI-AKILFEGLTAIKN---RFPNMFLEVRGQGLLIGLK 336 (392)
Q Consensus 265 ~~~~~~~~--~T~~gnpl~~aaa~a~L~~l~~~--~l~~~~~~~-g~~l~~~L~~l~~---~~~~~v~~vRG~Gl~~~ie 336 (392)
.+....-| .|.+-.|..++-|++++++++.+ ..+.+.++. -+++++-|.++-- ..|.-|..|| .|
T Consensus 391 miRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~~pSHIiPv~-----vg-- 463 (570)
T KOG1360 391 MIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIPNPSHIIPVR-----VG-- 463 (570)
T ss_pred HHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE-----CC--
T ss_conf 99974686687337982888728999999863254789999999999999999874986347886533355-----06--
Q ss_pred ECCCHHHHHHH-HHHCCEEE-------EECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 24998999999-99689899-------626898899558986889999999999999999852
Q gi|254780432|r 337 TVFSPALLAAK-FRDECLLT-------APSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 337 ~~~~~~~~~~~-l~~~Gll~-------~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
...-....... +-++++++ .+.|.+.+|++|.---|++-++.+++.+..+..++.
T Consensus 464 da~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360 464 DAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred CHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 777777778998875275788526874566601342179998878999999999999999729
No 131
>PRK07682 hypothetical protein; Validated
Probab=99.68 E-value=4.3e-15 Score=119.14 Aligned_cols=335 Identities=13% Similarity=0.170 Sum_probs=193.4
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHHHHHCC-----CCCCCCCCCCCCCH
Q ss_conf 99764641022674357878999999999999731--450687578189999986520101-----33312356555403
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL--WHVSNLYQSTQQEIFANHLIHSTF-----ADRVFFTNSGAESV 102 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~--~~~~~~~~~~~~~~la~~L~~~~~-----~~~v~f~~SGseA~ 102 (392)
.++..|++.-| -..+ -..|+|++|+.++++.. .|.......+.+..+++.+.+..+ .+.+++++++++|.
T Consensus 18 ~~~dvi~l~vg--dpdf-~~p~~i~ea~~~~~~~g~~~Y~~~~G~~~lreaia~~~~~r~g~~~~p~~~i~vt~G~~~al 94 (378)
T PRK07682 18 NMEGVISLGVG--EPDF-VTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL 94 (378)
T ss_pred CCCCCEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHH
T ss_conf 89982889999--8999-87899999999998569999899988899999999999998489999777599907859999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++.-- .+| +.|+..+-.|...... ....|.... |.......-..-|.+.+++.+.+++-++++
T Consensus 95 ~~~~~~l~-------~pG-D~Vlv~~P~Y~~y~~~-~~~~g~~~v-----~~~~~~~~~~~~d~~~le~~~~~~~k~iil 160 (378)
T PRK07682 95 DVAMRAII-------NPG-DEVLIVEPSFVSYAPL-VTLAGGVPV-----PVATSLENEFKVQPAQIEAAITAKTKAILL 160 (378)
T ss_pred HHHHHHHC-------CCC-CEEEEECCCHHHHHHH-HHHHCCEEE-----EECCCCCCCCCCCHHHHHHHCCCCCCEEEE
T ss_conf 99999965-------999-9899925850527999-998188569-----940265458637999999736526838998
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC-CCCCCCCE---EECCCCCC-CCCCCCCC
Q ss_conf -33222211246210123221102234572131011003444455531011-12454530---21034444-44344321
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYE-WANVKPDI---MTIAKGMG-GGFPIGAC 256 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e-~~gi~PDi---~~~gK~l~-gG~P~sav 256 (392)
-| ..-.| ...+++-+++|.++|++||+++|.|||...+---|.+-... ..+..... ..+||.++ .|+-+|.+
T Consensus 161 ~~P-~NPtG-~v~s~~el~~l~~la~~~~i~iisDEiY~~l~~~~~~~~~~~~~~~~~~~i~~~s~SK~f~l~G~R~G~~ 238 (378)
T PRK07682 161 CSP-NNPTG-AVLNKSELEEIAVIVEKHNLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGMI 238 (378)
T ss_pred CCC-CCCCC-CCCCHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEE
T ss_conf 289-79888-8889999999999764459679522014653069876776552564445420234124207857306989
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEE
Q ss_conf 00011122222332234532111100123345543201--2221011210000268899998867970755046400999
Q gi|254780432|r 257 LATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIG 334 (392)
Q Consensus 257 ~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ 334 (392)
++.+++.+.+.......++..+.+.-.++.+.++.-.+ +++.+..++.-+.+.+.|+++ ++ .-....|.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~~r~~~~~~l~~~-----g~-~~~~P~g~~~~ 312 (378)
T PRK07682 239 AAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRNGNDDVERMRDSYRKRRNFFVTSLNEI-----GL-TCHVPGGAFYA 312 (378)
T ss_pred EECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-----CC-EECCCCEEEEE
T ss_conf 7089999999999975567798489999999997576879999999999999999999975-----98-22068867899
Q ss_pred -EEEC---CCHHHHHHH-HHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -8724---998999999-99689899626------898899558986889999999999999999852
Q gi|254780432|r 335 -LKTV---FSPALLAAK-FRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 335 -ie~~---~~~~~~~~~-l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+++. .+...++++ +.+.||.+.|. +++.+||. +..++++|++++++|++++.+..
T Consensus 313 ~~~~~~~~~~~~~~~~~ll~~~~V~v~PG~~Fg~~g~~~iRl~--~a~~~e~l~eal~Rl~~~l~~~k 378 (378)
T PRK07682 313 FPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCS--YATSLEQLQEAMKRMKRFVENKK 378 (378)
T ss_pred EEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 5787888989999999999969999988622289998979999--61999999999999999998469
No 132
>PRK03321 putative aminotransferase; Provisional
Probab=99.68 E-value=5.6e-15 Score=118.37 Aligned_cols=318 Identities=18% Similarity=0.207 Sum_probs=199.6
Q ss_pred EEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 6464102267435787899999999999973145068757818999998652010--13331235655540356777665
Q gi|254780432|r 33 PFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHST--FADRVFFTNSGAESVECAIKTAR 110 (392)
Q Consensus 33 ~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~--~~~~v~f~~SGseA~e~Aiklar 110 (392)
..|||.++ -+.+|- .|.+++|+.++++.+.. |..+...+|-+.|.+.. ..+.+..+|+.+|+...+++...
T Consensus 23 ~~i~ls~N--enp~gp-~p~v~~ai~~~~~~~~~----YPd~~~~~Lr~aiA~~~~v~~~~I~v~nGs~e~i~~~~~~~~ 95 (352)
T PRK03321 23 GAIKLSSN--ETPFGP-LPSVRAAIAEATDGLNR----YPDNGAVELRAALAEHLGVAPEHVAVGCGSVALCQQLVQATA 95 (352)
T ss_pred CCEECCCC--CCCCCC-CHHHHHHHHHHHHHCCC----CCCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHH
T ss_conf 93780296--999998-89999999986530677----989986999999999878785879987469999999999981
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC-CCCCCCCC
Q ss_conf 43200134786002343546565432123455321134799986433322210026887541012332222-33322221
Q gi|254780432|r 111 RYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL-IEPIQGEG 189 (392)
Q Consensus 111 ~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi-~Epv~g~~ 189 (392)
.+| .+|+..+.+|-.-...+. +.|-....- |..+++ ..|++++.+.+.++.-+++ .-|= .-.
T Consensus 96 -------~~g-d~Vl~p~P~f~~Y~~~~~-~~G~~~~~v---~l~~~~----~~dl~~l~~~i~~~~~lv~l~nPn-NPT 158 (352)
T PRK03321 96 -------GPG-DEVVFAWRSFEAYPILVQ-VAGATPVQV---PLTDDH----THDLDAMAAAITDRTRLIFVCNPN-NPT 158 (352)
T ss_pred -------CCC-CEEEECCCCHHHHHHHHH-HCCCEEEEE---ECCCCC----CCCHHHHHHHCCCCCCEEEECCCC-CCC
T ss_conf -------797-989988885326899999-809879998---667555----788378998658887589984999-973
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 1246210123221102234572131011003444455531-011124545302---1034444-4434432100011122
Q gi|254780432|r 190 GVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AYEWANVKPDIM---TIAKGMG-GGFPIGACLATNEVAA 264 (392)
Q Consensus 190 G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~~ 264 (392)
|. ..+++.++++.+.|++ ++++|+||....|..-+... +.+...-.|.++ +|||..+ .|+=+|.+++++++.+
T Consensus 159 G~-~~~~~~l~~l~~~~~~-~~~vvvDEaY~~f~~~~~~~~~~~~~~~~~nlivlrSfSK~~glaGlRlGy~ia~~~~i~ 236 (352)
T PRK03321 159 GT-VVTPAALARFVAAVPA-DVLVVLDEAYVEYIRDGDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIT 236 (352)
T ss_pred CC-CCCCHHHHHHHHHCCC-CCEEEEHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEECCHHHHH
T ss_conf 01-3683758999975547-847972240898842778762788752045255402544133789885332028999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH---CCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH
Q ss_conf 2223322345321111001233455432012221011210---0002688999988679707550464009998724998
Q gi|254780432|r 265 CMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINI---AKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP 341 (392)
Q Consensus 265 ~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~---g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~ 341 (392)
.+.... ..|+-|.++.++|.++|+- ++.+.++++.. -+++.+.|++ . ++ .-....|-++-+....+.
T Consensus 237 ~l~~~~--~p~~v~~~aq~aa~aaL~~--~~~~~~~~~~~~~~R~~l~~~L~~----~-g~-~v~ps~anFi~~~~~~~~ 306 (352)
T PRK03321 237 ALRKVA--VPFSVNSLAQAAAIASLEA--ADELLERVDAVVAERDRVSAALRA----A-GW-TVPPSQANFVWLPLGERT 306 (352)
T ss_pred HHHHHC--CCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHH----C-CC-EECCCCCEEEEEECCCCH
T ss_conf 999845--8988559999999999649--299999999999999999999997----8-58-588998749999518999
Q ss_pred HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999996898996268988995589868899999999999999998
Q gi|254780432|r 342 ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 342 ~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
..+++.|.++|+++++.+++.+|++ +=|++|-++++++|++-+.-
T Consensus 307 ~~~~~~L~~~GIlVR~~~~~~~RIs---vgt~een~~ll~Alk~~~~g 351 (352)
T PRK03321 307 ADFAAAAAEAGVVVRPFGGEGVRVT---VGAPEENDAFLRAARAWRAG 351 (352)
T ss_pred HHHHHHHHHCCEEEEECCCCEEEEE---ECCHHHHHHHHHHHHHHHCC
T ss_conf 9999999819939986699918998---09999999999999999724
No 133
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.68 E-value=1.2e-14 Score=116.29 Aligned_cols=329 Identities=15% Similarity=0.174 Sum_probs=185.9
Q ss_pred EEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHHHHHHHCC----CC-CCCCCCCCCCCHHHHH
Q ss_conf 64641022674357878999999999999731450687578-189999986520101----33-3123565554035677
Q gi|254780432|r 33 PFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQS-TQQEIFANHLIHSTF----AD-RVFFTNSGAESVECAI 106 (392)
Q Consensus 33 ~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~-~~~~~la~~L~~~~~----~~-~v~f~~SGseA~e~Ai 106 (392)
+.|||.-| ..-.=..|.+.+|+++.+.....+++.... +.+..+++.+.+..+ .| .++.+++..||+..++
T Consensus 1 ~ii~l~~g---~P~~p~P~~i~~al~~a~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~d~~I~~t~Ga~~al~~~~ 77 (350)
T TIGR03537 1 RLFDFGTG---DPKEPTPPIIRNALKNAVPEVSQYPSAAGTKALRDAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFP 77 (350)
T ss_pred CEEECCCC---CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 95787698---999998799999999960215899898474999999999999986899897877998788389999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-CCC
Q ss_conf 7665432001347860023435465654321234553211347999864333222100268875410123322223-332
Q gi|254780432|r 107 KTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI-EPI 185 (392)
Q Consensus 107 klar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~-Epv 185 (392)
+.... .|.. .++|+..+-+|.+....+.....+... -|..+ ..-...|++++++.+.++.-++++ -|
T Consensus 78 ~~~~~----~gd~-~~~Vlv~~P~y~~y~~~~~~~g~~~~~----v~l~~--~~g~~~d~e~l~~~~~~~~~~i~l~nP- 145 (350)
T TIGR03537 78 LVFID----PEED-RRRVIFGTPGYPVYERGALFAGGEPTP----VKLKE--EDGFLLRLEKVDKEILKETKIVWINYP- 145 (350)
T ss_pred HHHCC----CCCC-CCEEEEECCCCCCHHHHHHHCCCEEEE----EECCC--CCCCCCCHHHHHHHCCCCCEEEEECCC-
T ss_conf 99738----8877-876999469873069999976998999----75355--448877999999746668719998999-
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC----EEECCCCCC-CCCCCCCCCCCC
Q ss_conf 222112462101232211022345721310110034444555310111245453----021034444-443443210001
Q gi|254780432|r 186 QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD----IMTIAKGMG-GGFPIGACLATN 260 (392)
Q Consensus 186 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD----i~~~gK~l~-gG~P~sav~~~~ 260 (392)
+.-.|. ..+.+-++++.++|++||+++|.||+..-+--.+..... .....| +-.++|..+ .|+=+|.+++.+
T Consensus 146 ~NPTG~-v~s~~~l~~l~~~a~~~~~~vi~DE~Y~~l~~~~~~~~~--~~~~~~~~i~~~S~SK~~~~pGlR~G~~~~~~ 222 (350)
T TIGR03537 146 HNPTGA-VAPRSYLEETIAICQEHNIILCSDECYTEIYFGEPPHSA--LEVGMENVLAFHSLSKRSGMTGYRSGFVAGDE 222 (350)
T ss_pred CCCCCC-CCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCCH--HHHCCCCEEEEECCCCCCCCCCCEEEEEECCH
T ss_conf 898364-769999999998632369079843122455348998775--56346877999667545046775599997899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEC--
Q ss_conf 112222233223453211110012334554320122210112100002688999988679707550464009998724--
Q gi|254780432|r 261 EVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTV-- 338 (392)
Q Consensus 261 ~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~-- 338 (392)
++.+.+.........+...+..+++.+.+ .++..++..++.=+.-++.+.+...+. ++....-.-|+++=+++.
T Consensus 223 ~li~~~~~~~~~~~~~~~~~~q~a~~~~~---~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~~p~g~~~~w~~~~~~ 298 (350)
T TIGR03537 223 KLISFLKKLRANFGVASPDFVQAAAKAAW---SDDSHVIERRKIFRRKRDLFLEFFNKK-GLEYLYPDATFYLWVKVPNG 298 (350)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCCCEEEEEEECCCC
T ss_conf 99999999862067772899999999995---680999999999999999999998648-98882688225998979999
Q ss_pred CCHHHHHHHHHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 99899999999689899626------898899558986889999999999999
Q gi|254780432|r 339 FSPALLAAKFRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 339 ~~~~~~~~~l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
.+...+++++.++||.+.+. +++.+|++ +..+.++|++++++|++
T Consensus 299 ~~~~~~~~~ll~~gV~v~pG~~Fg~~~~~~~Rl~--~~~~~e~l~ealrrl~~ 349 (350)
T TIGR03537 299 ISSKDYALRLLENGIVVAPGENFGSGEEGYVRVA--LVPTLEECEEALRIWES 349 (350)
T ss_pred CCHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--EECCHHHHHHHHHHHHC
T ss_conf 8999999999979989976731189999869999--72899999999999861
No 134
>PRK09276 aspartate aminotransferase; Provisional
Probab=99.68 E-value=3.3e-15 Score=119.89 Aligned_cols=329 Identities=17% Similarity=0.218 Sum_probs=190.0
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC---CCCCCCCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCC
Q ss_conf 7997646410226743578789999999999997314---50687578189999986520101----33-3123565554
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW---HVSNLYQSTQQEIFANHLIHSTF----AD-RVFFTNSGAE 100 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~---~~~~~~~~~~~~~la~~L~~~~~----~~-~v~f~~SGse 100 (392)
..|++.|++.-| -..+ -..|.|++|+.+.++... +.......+.+..+++.+.+..+ .+ .+..++++++
T Consensus 28 ~~G~dvi~l~~G--~pd~-~~p~~i~~al~~a~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~~vv~t~Ga~~ 104 (385)
T PRK09276 28 ARGVDVISLGIG--DPDM-PTPKHIVEAMKKAAEDPANHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE 104 (385)
T ss_pred HCCCCEEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHH
T ss_conf 479981889799--8999-9899999999999808777665997271999999999999982987686776998788449
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 03567776654320013478600234354656543212345532113479998643332221002688754101233222
Q gi|254780432|r 101 SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI 180 (392)
Q Consensus 101 A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav 180 (392)
|...+++.-- .+| +.||..+-+|.+....+......... -|..+ +.-...|++.+++.+.++..++
T Consensus 105 al~~~~~~l~-------~pG-D~Vli~~P~Y~~y~~~~~~~g~~~v~----vp~~~--~~~~~~d~~~l~~~~~~~~k~i 170 (385)
T PRK09276 105 GIAHIPLAFV-------NPG-DYVLVPDPGYPVYAIGTIFAGGEPYF----MPLKE--ENGFLPDLDAIPEDVARKAKLM 170 (385)
T ss_pred HHHHHHHHHC-------CCC-CEEEECCCCCCHHHHHHHHCCCEEEE----CCCCC--CCCCCCCHHHHHHHHCCCCEEE
T ss_conf 9999999973-------999-98998888662059999986997850----68666--6798579999997510167299
Q ss_pred CCC-CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CCCCCCCCCCE----EECCCCCC-CCCCC
Q ss_conf 233-3222211246210123221102234572131011003444455531-01112454530----21034444-44344
Q gi|254780432|r 181 LIE-PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AYEWANVKPDI----MTIAKGMG-GGFPI 253 (392)
Q Consensus 181 i~E-pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~e~~gi~PDi----~~~gK~l~-gG~P~ 253 (392)
++- | +.--|. ..+.+-+++|.++|++||+.+|.|||...+---|... ..-...-..|. -.+||.++ .|+=+
T Consensus 171 il~~P-~NPTG~-v~s~~~l~~l~~la~~~~i~ii~DEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~Rv 248 (385)
T PRK09276 171 FINYP-NNPTGA-VADLEFFEKVVDFAKKYDIIVCHDNAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRI 248 (385)
T ss_pred EECCC-CCCCCC-HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCCEE
T ss_conf 98999-898551-1118899999876325575697544422210388888776553454244303046545568876207
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH----HHHHCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 32100011122222332234532111100123345543201222101----12100002688999988679707550464
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN----VINIAKILFEGLTAIKNRFPNMFLEVRGQ 329 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~~v~~vRG~ 329 (392)
|.+++++++++.+.......+.+.+...-.++.+.++.- ++++++ .+++-+.+.+.|+++ ++ .-.+..
T Consensus 249 G~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~al~~~--~~~~~~~~~~~~~rr~~~~~~L~~~-----g~-~~~~p~ 320 (385)
T PRK09276 249 GFAVGNADLIAGLGKVKSNVDSGVFQAIQEAAIAALNGP--QDVVEELRAIYQERRDILVEGLNSL-----GW-EVEKPK 320 (385)
T ss_pred EEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHC-----CC-EEECCC
T ss_conf 999759999999999997655771099999999998486--9999999999899999999999876-----98-662688
Q ss_pred EEE-EEEEEC--CCHHHHHHHHHH-CCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 009-998724--998999999996-89899626------8988995589868899999999999999
Q gi|254780432|r 330 GLL-IGLKTV--FSPALLAAKFRD-ECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 330 Gl~-~~ie~~--~~~~~~~~~l~~-~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
|-+ .=+++. .+...++.++++ .||.+.|. +.+.+||. +..++++|++++++|++.
T Consensus 321 gg~~~w~~l~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~--~a~~~e~l~eal~Rl~kl 385 (385)
T PRK09276 321 ATFYVWAPVPKGYTSAEFATLLLDKAGIVVTPGNGFGTAGEGYFRIA--LTVPDERIEEAVERIKKL 385 (385)
T ss_pred EEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--EECCHHHHHHHHHHHHCC
T ss_conf 57799788999989899999999819999988742188998869999--759999999999998429
No 135
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.68 E-value=1e-14 Score=116.74 Aligned_cols=338 Identities=19% Similarity=0.236 Sum_probs=193.0
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHH---CCCCCCCCCCCCCCCHHH
Q ss_conf 799764641022674357878999999999999731-4506875781899999865201---013331235655540356
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVSNLYQSTQQEIFANHLIHS---TFADRVFFTNSGAESVEC 104 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~~~~~~~~~~~la~~L~~~---~~~~~v~f~~SGseA~e~ 104 (392)
..|++.|++.-| .-.+- -++.+++|+++..+.. .|.+.....+.++.+++.+... ...|.++.++++++|...
T Consensus 27 ~~G~~vi~l~iG--~Pd~~-~P~~~~~a~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~g~~~~~d~I~iT~Ga~~al~~ 103 (396)
T PRK07568 27 KRGIKVYHLNIG--QPDIK-TPEVFFEAIRNYDEEVLAYSHSAGIDSLREAFSKYYKRFNIDFDKDEIIVTNGGSEAILF 103 (396)
T ss_pred HCCCCEEECCCC--CCCCC-CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHH
T ss_conf 779980888798--89998-769999999850737898899867199999999999986889882228985780699999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 77766543200134786002343546565432123455321134799986433322210026887541012332222333
Q gi|254780432|r 105 AIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEP 184 (392)
Q Consensus 105 Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Ep 184 (392)
+++.-- .+| +.|+..+-+|.+....+.....+... + |..+. .....++++.+++.+.+++-++++-.
T Consensus 104 ~~~~l~-------~pG-D~Vlv~~P~y~~y~~~~~~~g~~~v~---v-~~~~e-~g~~lp~~~~l~~~~~~~tk~ii~~~ 170 (396)
T PRK07568 104 ALMAIC-------DPG-DEIIVPEPFYANYNGFATSAGVKIVP---V-TTKIE-EGFHLPKKEEIEKLITDKTKAILISN 170 (396)
T ss_pred HHHHHC-------CCC-CEEEEECCCCCCHHHHHHHCCCEEEE---C-CCCHH-HCCCCCCHHHHHHHCCCCCEEEEECC
T ss_conf 999727-------998-98999389753259999984987851---6-76721-18878969999974776574998589
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC--CCCCCCCCE---EECCCCCCC-CCCCCCCCC
Q ss_conf 22221124621012322110223457213101100344445553101--112454530---210344444-434432100
Q gi|254780432|r 185 IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY--EWANVKPDI---MTIAKGMGG-GFPIGACLA 258 (392)
Q Consensus 185 v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~--e~~gi~PDi---~~~gK~l~g-G~P~sav~~ 258 (392)
=+.-.|. ..+.+.+++|.++|++||+++|.||+...+.-.|.-+-+ +..+...-+ -.+||.++- |+=+|.+++
T Consensus 171 P~NPTG~-v~s~~~~~~l~~la~~~~~~ii~De~Y~~l~y~g~~~~s~~~~~~~~~~vI~i~S~SK~~~~~G~RiG~~v~ 249 (396)
T PRK07568 171 PGNPTGV-VYTKEELRQLADIAKEHDLFLISDEVYREFTYDGLKYTSAMNIEGIEDRVIIIDSVSKRYSACGARIGSLIT 249 (396)
T ss_pred CCCCCCC-CCCHHHHHHHHHHHHHHCEEEECCCCHHHHEECCCCCCCHHCCCCCCCCEEEECCCCCCCCCCHHHEEEEEC
T ss_conf 9298875-401578999999998710667424535552208987757200556544225640455665784054355530
Q ss_pred C-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEE-E
Q ss_conf 0-11122222332234532111100123345543201--222101121000026889999886797075504640099-9
Q gi|254780432|r 259 T-NEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLI-G 334 (392)
Q Consensus 259 ~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~-~ 334 (392)
. +++.+.+..... .+.+.+.+.-.++.+.|+.-++ +++.+..+++-+.+.+.|+ +++++ .-.+..|-|+ =
T Consensus 250 ~~~~~~~~~~~~~~-~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~y~~rrd~~~~~L~----~~~g~-~~~~P~Ggfyl~ 323 (396)
T PRK07568 250 KNKELIKQAMKLCQ-ARLCPPTLEQIGAAALLNTPESYFKEVREEYEKRRDILYEGLN----KIPGV-VCEKPTGAFYII 323 (396)
T ss_pred CCHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH----HCCCC-EECCCCEEEEEE
T ss_conf 99999999999712-1478977999999999858779999999999999999999997----07997-867888578999
Q ss_pred EEEC-CCHHHHHHHHHH------CCEEEEEC---------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8724-998999999996------89899626---------898899558986889999999999999999852
Q gi|254780432|r 335 LKTV-FSPALLAAKFRD------ECLLTAPS---------SDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 335 ie~~-~~~~~~~~~l~~------~Gll~~~~---------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+++. .+...++.++.+ +||.+.|. |.+.|||+ +..++++|++++++|.++|.+-+
T Consensus 324 ~~lp~~~~~~f~~~ll~~~~~~~~~V~v~PG~~F~~~~g~g~~~iRls--~~~~~e~l~ea~~Rl~~~l~~~~ 394 (396)
T PRK07568 324 AKLPVDDAEDFAKWMLTDFEYNGETVMVAPASGFYATPGLGKDEIRIA--YVLEKEDLRRAMEILKKALEAYN 394 (396)
T ss_pred EECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 958999999999999996212488699977634168998999969999--71999999999999999999852
No 136
>PRK06575 consensus
Probab=99.68 E-value=1.6e-14 Score=115.49 Aligned_cols=333 Identities=14% Similarity=0.157 Sum_probs=195.6
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCC-CCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731-4506-87578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVS-NLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~-~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
..|++.|++.-|- -.+ -..|.|++|+.++++.. ..++ .....+.+..+++.+....+ .|.+..++++++|.
T Consensus 28 ~~G~dvi~L~iG~--pdf-~~p~~i~~a~~~a~~~g~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~d~i~vt~G~~~al 104 (399)
T PRK06575 28 KAGVDIIALGAGE--PDF-DTPDNIKEAAIKAIKDGFTKYTNVEGMPLLKQAIKDKFKRENNIDYELDEIIVSTGGKQVI 104 (399)
T ss_pred HCCCCEEECCCCC--CCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCHHH
T ss_conf 7799837788958--999-9699999999999855999889987839999999999999858999843199948952899
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++.- -.+| .+||..+-+|...........+.+... +. +...-...|++++++.+.+++-++++
T Consensus 105 ~~~~~~l-------~~pG-D~Vli~~P~y~~y~~~~~~~~~~~v~~----~~--~~e~~~~~d~e~l~~~~~~~~k~iil 170 (399)
T PRK06575 105 YNLFMAS-------LDKG-DEVIIPAPYWVSYPDMVALSTGTPVFV----NC--GIENNFKLSAEALERSITDKTKWLII 170 (399)
T ss_pred HHHHHHH-------CCCC-CEEEECCCCCCCHHHHHHHHCCEEEEE----CC--CCCCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 9999986-------5899-989974785323589999828856994----15--75546555899998644447679998
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCC-CCEEEECCCCCCCCCCCCCCCCCCCCCCCCE-------EECCCCCC-CCCC
Q ss_conf -332222112462101232211022345-7213101100344445553101112454530-------21034444-4434
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDI-DALLIFDEVQTGYGRTGKLFAYEWANVKPDI-------MTIAKGMG-GGFP 252 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi-------~~~gK~l~-gG~P 252 (392)
-|= .-.| ...+++.|+++.++|++| ++++|.|||...+--.|.-+-+ ...+.||+ -.+||..+ .|+=
T Consensus 171 ~nP~-NPTG-~v~~~eel~~i~~~~~k~~~v~iisDEiY~~~~~~~~~~~s-~~~~~~~~~~~~i~~~s~SK~~~~~G~R 247 (399)
T PRK06575 171 NSPS-NPTG-ASYNFEELENIAKVLRKYPHVNVMSDDIYEHITFDDFKFYT-LAQIAPDLKERIFTVNGVSKAYSMTGWR 247 (399)
T ss_pred CCCC-CCCC-CCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCC-HHHHCCCCCCCEEEECCCCCCCCCCCCC
T ss_conf 9999-9988-87889999999999874587378421356664168987741-1330765422325741421014787723
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH----HHHHCCHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 432100011122222332234532111100123345543201222101----1210000268899998867970755046
Q gi|254780432|r 253 IGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN----VINIAKILFEGLTAIKNRFPNMFLEVRG 328 (392)
Q Consensus 253 ~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~~v~~vRG 328 (392)
+|.+++.+++++.+.......+...+.++..++.+.|+.. ++.++. .+++-+.+.+.|+ +.+. +.-.+.
T Consensus 248 iG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~~--~~~~~~~~~~~~~~r~~~~~~l~----~~~~-~~~~~P 320 (399)
T PRK06575 248 IGYGAGSKALIKAMTIIQSQSTSNPCSISQMAAIEALNGP--QDYIKPNALNFQKKRDLALSILK----RVKY-FECYKP 320 (399)
T ss_pred EEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHH----HCCC-CEEECC
T ss_conf 3753087999999999996156786689999999998584--77899999999999999999986----4798-446179
Q ss_pred CEEEEE-EEEC-------------CCHHHHHHHHHH-CCEEEEEC----CCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 400999-8724-------------998999999996-89899626----8988995589868899999999999999998
Q gi|254780432|r 329 QGLLIG-LKTV-------------FSPALLAAKFRD-ECLLTAPS----SDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 329 ~Gl~~~-ie~~-------------~~~~~~~~~l~~-~Gll~~~~----~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
.|.+.. +++. .+...+++++.+ .||.+.|. .++.+|+. +..++++|++++++|++++..
T Consensus 321 ~G~~yl~~~~~~~~~~~~~~~~~~~~~~~f~~~Ll~e~~V~v~PG~~FG~~g~~Rl~--~a~~~e~l~ea~~Rl~~a~~~ 398 (399)
T PRK06575 321 EGAFYLFVKCDKIFGHKTKSGKIIANSNDFAEYLLEEAKVAVVPGIAFGLEGYFRIS--YATSMEELEEACIRIERACNV 398 (399)
T ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHH
T ss_conf 923799577730015444346767899999999997299999848555899839999--739899999999999999974
Q ss_pred H
Q ss_conf 5
Q gi|254780432|r 390 L 390 (392)
Q Consensus 390 L 390 (392)
|
T Consensus 399 L 399 (399)
T PRK06575 399 L 399 (399)
T ss_pred C
T ss_conf 9
No 137
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.67 E-value=5.7e-15 Score=118.32 Aligned_cols=329 Identities=14% Similarity=0.185 Sum_probs=196.4
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCCCC-CCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCCC
Q ss_conf 799764641022674357878999999999999731-450687-578189999986520101----33-31235655540
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVSNL-YQSTQQEIFANHLIHSTF----AD-RVFFTNSGAES 101 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~~~-~~~~~~~~la~~L~~~~~----~~-~v~f~~SGseA 101 (392)
..|++.|++.-|.- .+ --.|.+++|+.+.++.. .+..+. ...+.+..+++.+.+..+ .| .++.++++++|
T Consensus 29 ~~g~~vI~l~iG~P--d~-~~p~~i~~a~~~~~~~~~~~~y~~~G~~eLReaia~~~~~~~g~~~~pd~~I~vt~G~~~a 105 (399)
T PRK07681 29 AAGHKMIDLSIGNP--DM-PPADFVREEMVHTANEKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDG 105 (399)
T ss_pred HCCCCEEECCCCCC--CC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHH
T ss_conf 67998388989889--99-8789999999999718776888988739999999999999868998988849986888999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 35677766543200134786002343546565432123455321134799986433322210026887541012332222
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
...+++.-- .+| ..|+..+.+|.+...........+.. -|..+ +.-...|++.+++.+.+++.+++
T Consensus 106 l~~~~~al~-------~pG-D~Vli~~P~Y~~y~~~~~~~g~~~v~----vpl~~--e~~~~~d~~~l~~~i~~~tk~ii 171 (399)
T PRK07681 106 LVHLPMVYA-------NPG-DIILVPDPGYTAYETGIQMAGATSYY----MPLKK--ENDFLPDLELIPEEIADKAKMMI 171 (399)
T ss_pred HHHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHCCCEEEE----EECCC--CCCCHHHHHHHHHHCCCCCEEEE
T ss_conf 999999967-------999-98997568744279999876998999----50576--66743689999985322555999
Q ss_pred CC-CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CC-CCCCCCC---CEEECCCCCC-CCCCCC
Q ss_conf 33-3222211246210123221102234572131011003444455531-01-1124545---3021034444-443443
Q gi|254780432|r 182 IE-PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AY-EWANVKP---DIMTIAKGMG-GGFPIG 254 (392)
Q Consensus 182 ~E-pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~-e~~gi~P---Di~~~gK~l~-gG~P~s 254 (392)
+- |= .-.|. ..+++.+++|.++|++||+++|.||+...+--.|.-+ .+ ...+... -+-.+||..+ .|+=+|
T Consensus 172 l~~P~-NPTG~-v~s~e~l~~l~~la~~~~i~iIsDEiY~~l~~~~~~~~s~~~~~~~~~~~I~i~S~SK~~~~~G~RiG 249 (399)
T PRK07681 172 LNFPG-NPVPA-MAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIG 249 (399)
T ss_pred ECCCC-CCCCC-CCCHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCCCEE
T ss_conf 76998-98887-78999999999985313633431255111031798875764433541345253221345556532169
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH----HHHHCCHHHHHHHHHHHHCCCEEEEECCCE
Q ss_conf 2100011122222332234532111100123345543201222101----121000026889999886797075504640
Q gi|254780432|r 255 ACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN----VINIAKILFEGLTAIKNRFPNMFLEVRGQG 330 (392)
Q Consensus 255 av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G 330 (392)
.+++.+++++.+.......+++.+...-.++.+.|+.- +.++++ .+++-+.+.+.|+++ ++. -.+..|
T Consensus 250 ~~i~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~~--~~~~~~~r~~~~~rr~~l~~~L~~~-----g~~-~~~P~G 321 (399)
T PRK07681 250 YMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNG--AAFCEKNREIYQERRDTLVDGFRTF-----GWN-VDKPAG 321 (399)
T ss_pred EEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHC-----CCE-ECCCCC
T ss_conf 99709999999999998665674539999999999687--4789999999999999999999875-----986-337880
Q ss_pred -EEEEEEEC--CCHHHHHHHHHH-CCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf -09998724--998999999996-89899626------8988995589868899999999999999
Q gi|254780432|r 331 -LLIGLKTV--FSPALLAAKFRD-ECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 331 -l~~~ie~~--~~~~~~~~~l~~-~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
++.=+++. .+...++.++.+ .||.+.|. +.+.+||. |..++++|++++++|+++
T Consensus 322 g~y~w~~l~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~g~g~iRl~--f~~~~e~l~eal~RLk~a 385 (399)
T PRK07681 322 SMFVWAEIPDGWTSLDFAYALMDRANVVVTPGHAFGPHGEGFVRIA--LVQDKEVLQQVVENIRNS 385 (399)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--EECCHHHHHHHHHHHHHC
T ss_conf 0289688999999799999999829999988646589998869999--718899999999999888
No 138
>PRK07543 consensus
Probab=99.67 E-value=5.2e-15 Score=118.59 Aligned_cols=333 Identities=13% Similarity=0.120 Sum_probs=197.2
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731--450687578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL--WHVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~--~~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
..|++.|++.-|- -.+. -+|.|.+|++++++.. .|.......+.+..+++.+.+..+ .|.+..++++++|.
T Consensus 28 ~~G~dii~l~~G~--pdf~-~p~~i~~a~~~al~~~~~~Y~~~~G~~eLR~aia~~~~~~~g~~~~pd~V~vt~G~~~al 104 (400)
T PRK07543 28 AAGRDVIGLGAGE--PDFD-TPDNIKQAAIAAINAGKTKYTAVDGIPELKQAICAKFKRENGLDYKPEQVIVGTGGKQIL 104 (400)
T ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH
T ss_conf 7799807899979--9999-799999999999845999898998809999999999999848998804289927826999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++..- .+| ++||..+-+|...........+.+... +.. ...-...|.+.+++.+.+++-++|+
T Consensus 105 ~~~~~al~-------~pG-D~Vlv~~P~Y~~y~~~~~~~g~~~v~v----~~~--~e~~~~~d~~~le~~i~~~~k~iil 170 (400)
T PRK07543 105 YNALMATL-------NPG-DEVIIPAPYWVSYPEMVALAGGTPVFV----ETT--AEFGFKLTPEALEAAITPKTKWFIF 170 (400)
T ss_pred HHHHHHHC-------CCC-CEEEEECCCCCCCHHHHHHHCCEEEEE----ECC--CCCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999857-------999-989982786655368999808835995----246--3337543847789747866719998
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCC-CCEEEECCCCCCCCCCCCCCCCCCCCCCCC-------EEECCCCCC-CCCC
Q ss_conf -332222112462101232211022345-721310110034444555310111245453-------021034444-4434
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDI-DALLIFDEVQTGYGRTGKLFAYEWANVKPD-------IMTIAKGMG-GGFP 252 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GRtG~~f~~e~~gi~PD-------i~~~gK~l~-gG~P 252 (392)
-| ..-.|. ..+.+.+++|.++|.+| ++++|.||+...+--.|.-|.. -..+.|+ +-.+||..+ .|+=
T Consensus 171 ~~P-~NPTG~-v~s~~~l~~l~~~~~~~~~v~iisDEiY~~l~~~~~~~~~-~~~~~p~~~~~~i~~~s~SK~~~~~G~R 247 (400)
T PRK07543 171 NSP-SNPTGA-AYTRAELKALTDVLVKHPHVWVLTDDMYEHLVYDDFVFTT-PAQVEPSLYDRTLTMNGVSKAYAMTGWR 247 (400)
T ss_pred CCC-CCCCCC-CCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCCCCCC-HHHCCHHHHCCCCCCCCCCHHCCCCCCC
T ss_conf 799-898883-7641678999998887538603131245664148978899-6782902210342037740520683430
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH----HHHHCCHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 432100011122222332234532111100123345543201222101----1210000268899998867970755046
Q gi|254780432|r 253 IGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN----VINIAKILFEGLTAIKNRFPNMFLEVRG 328 (392)
Q Consensus 253 ~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~~v~~vRG 328 (392)
+|.+++.+++.+.+.......+++.+.++-.+|.+.|+.- +++++. .+++-+.+.+.|++ .+++ .-...
T Consensus 248 iG~~~~p~~li~~~~~~~~~~~~~~~~~~Q~aa~~al~~~--~~~~~~~~~~~~~rrd~~~~~L~~----~~g~-~~~~P 320 (400)
T PRK07543 248 IGYAAGPAELIKAMDTIQSQSTSNPCSIAQWAAVEALNGP--QDFIPANKKIFQERRDLVVSMLNQ----AKGI-DCPTP 320 (400)
T ss_pred EEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHH----CCCC-CCCCC
T ss_conf 4888678999999999997504676609999999998585--999999999999999999999986----7798-46799
Q ss_pred CEEEEEE-EE-------------CCCHHHHHHHHH-HCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 4009998-72-------------499899999999-6898996268----988995589868899999999999999998
Q gi|254780432|r 329 QGLLIGL-KT-------------VFSPALLAAKFR-DECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 329 ~Gl~~~i-e~-------------~~~~~~~~~~l~-~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
.|.++.. ++ ..++..++.++. +.||.+.|.. ++.+||+ +..+++.|++++++|++.+.+
T Consensus 321 ~g~fy~~~~~~~~~~~~~p~~~~~~~~~~f~~~ll~~~gV~v~PG~~FG~~~~~Ri~--~a~~~e~l~ea~~Rl~~f~~~ 398 (400)
T PRK07543 321 EGAFYVYPSCAGLIGKTTPSGKVIETDEDFVTELLETEGVAVVHGSAFGLGPNFRIS--YATSDELLEEACKRIQRFCAS 398 (400)
T ss_pred CEEEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEE--ECCCHHHHHHHHHHHHHHHHH
T ss_conf 866898211032320037556767999999999998499999847010899998999--759899999999999999996
Q ss_pred H
Q ss_conf 5
Q gi|254780432|r 390 L 390 (392)
Q Consensus 390 L 390 (392)
|
T Consensus 399 l 399 (400)
T PRK07543 399 L 399 (400)
T ss_pred C
T ss_conf 5
No 139
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.67 E-value=7.2e-15 Score=117.69 Aligned_cols=332 Identities=13% Similarity=0.116 Sum_probs=191.5
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-C--CCCCCCCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCC
Q ss_conf 799764641022674357878999999999999731-4--50687578189999986520101----33-3123565554
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-W--HVSNLYQSTQQEIFANHLIHSTF----AD-RVFFTNSGAE 100 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~--~~~~~~~~~~~~~la~~L~~~~~----~~-~v~f~~SGse 100 (392)
..|++.|++.-| --.+ ...+.|++|++++++.. . |+......+.+..+++.+.+..+ .+ .++.++++++
T Consensus 27 ~~G~~vi~l~iG--~pdf-~~P~~i~~a~~~a~~~~~~~gY~~~~G~~~lR~aIa~~~~~~~g~~~~pe~~V~~t~G~~~ 103 (388)
T PRK07366 27 AAGKEVIDLSLG--SSDL-PAPAHALEAIAQSLQDPSTHGYLLFHGTLPFREAAAAWYEQRFGLAVDPETEVLPLIGSQE 103 (388)
T ss_pred HCCCCEEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 589984987086--8999-9889999999999809767678987578999999999999997898898873998478899
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 03567776654320013478600234354656543212345532113479998643332221002688754101233222
Q gi|254780432|r 101 SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI 180 (392)
Q Consensus 101 A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav 180 (392)
|...+++.. -.+| +.||..+-+|...........+.... -|..+ +.-...|++++++.+.++.-++
T Consensus 104 al~~~~~al-------~~pG-D~Vli~~P~Y~~y~~~~~~~G~~~~~----vpl~~--~~~~~~d~~~l~~~i~~~tk~i 169 (388)
T PRK07366 104 GTAHLPLAL-------LNPG-DFALLLDPGYPSHAGGVYLAGGQIYP----MPLRA--ENDFLPVFADIPTEVLAQARLM 169 (388)
T ss_pred HHHHHHHHH-------CCCC-CEEEEECCCCCCHHHHHHHCCCEEEE----EECCC--CCCCCCCHHHHHHHHHHCCCEE
T ss_conf 999999996-------6999-98998258776518999985985799----75466--6798479999987404228299
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC--CCCCCCCE--E--ECCCCCC-CCCC
Q ss_conf 23-33222211246210123221102234572131011003444455531011--12454530--2--1034444-4434
Q gi|254780432|r 181 LI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYE--WANVKPDI--M--TIAKGMG-GGFP 252 (392)
Q Consensus 181 i~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e--~~gi~PDi--~--~~gK~l~-gG~P 252 (392)
|+ -| +.--|. ..+++-++++.++|++||+++|.|||...+--.|...... ..+...+. . .+||..+ .|+=
T Consensus 170 il~~P-~NPTG~-v~s~~~l~~i~~~a~~~~i~lisDEiY~~l~~~~~~~~p~~~~~~~~~~~~i~~~S~SK~f~~~G~R 247 (388)
T PRK07366 170 VLSYP-HNPTTA-IAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFR 247 (388)
T ss_pred EECCC-CCCCCE-EEEHHHHHHHHHHHHHCCEEEECCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCE
T ss_conf 98589-898466-8038888889998740550786220214458668766613542572206179973353257887651
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE
Q ss_conf 432100011122222332234532111100123345543201--222101121000026889999886797075504640
Q gi|254780432|r 253 IGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG 330 (392)
Q Consensus 253 ~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G 330 (392)
+|.+++.+++++.+.......++...+..+.+|.+.++.-++ +++.+..+++-+.+.+.|+++ ++. -.+-.|
T Consensus 248 iG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~a~~al~~~~~~~~~~~~~~~~rr~~~~~~L~~~-----g~~-~~~P~g 321 (388)
T PRK07366 248 IGFAIGNAQLIAALRQIKAVVDFNQYRGILNGAIAALTGPQACVQQTVQIFRQRRDAFINALHRI-----GWP-VPLPEA 321 (388)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-----CCE-EECCCE
T ss_conf 89996799999999999875476543999999999996888999999999999999999999977-----987-507985
Q ss_pred E-EEEEEEC----CCHHHHHHHH-HHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 0-9998724----9989999999-9689899626------89889955898688999999999999999
Q gi|254780432|r 331 L-LIGLKTV----FSPALLAAKF-RDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 331 l-~~~ie~~----~~~~~~~~~l-~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
. ++=+++. .++..++.++ .+.||.+.|. +++.+||+ +..+++.|.+++++|++.|
T Consensus 322 ~~y~w~~l~~~~~~~~~ef~~~Ll~~~gV~v~PG~~Fg~~g~g~iRl~--~a~~~~~l~eal~Rl~~~l 388 (388)
T PRK07366 322 TMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFA--LVHDPDILEEAVERIAAFL 388 (388)
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHC
T ss_conf 779978789878899899999999839999976646588999869999--6299999999999999869
No 140
>PRK09148 aminotransferase; Validated
Probab=99.67 E-value=6.3e-15 Score=118.08 Aligned_cols=332 Identities=14% Similarity=0.129 Sum_probs=194.9
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC---CCCCCCCCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCC
Q ss_conf 799764641022674357878999999999999731---450687578189999986520101----33-3123565554
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL---WHVSNLYQSTQQEIFANHLIHSTF----AD-RVFFTNSGAE 100 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~---~~~~~~~~~~~~~~la~~L~~~~~----~~-~v~f~~SGse 100 (392)
..|++.||+.-| .-.+ --+|.|++|+.+.+... .|++.....+.++.+++.+....+ ++ .+..++++++
T Consensus 28 ~~G~~Vi~L~iG--~Pd~-~~P~~i~~a~~~a~~~~~~~~Y~~~~G~p~LReaia~~~~~r~g~~~~p~~~Iivt~Ga~~ 104 (406)
T PRK09148 28 AAGADIIDLGMG--NPDL-PTPQHIVDKLCETAGKPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKE 104 (406)
T ss_pred HCCCCEEECCCC--CCCC-CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 679982889898--9999-9789999999999749988878997585999999999999985898898873998879899
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 03567776654320013478600234354656543212345532113479998643332221002688754101233222
Q gi|254780432|r 101 SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI 180 (392)
Q Consensus 101 A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav 180 (392)
|...+++.- -.+| ..|+..+-+|-............... -|..+ ......+++.+.+....+.-++
T Consensus 105 al~~~~~al-------~~pG-D~Vli~~P~Yp~y~~~~~~~g~~~~~----v~~~~--~~~~~~~le~~~~~~~~ktk~i 170 (406)
T PRK09148 105 GFANMAQAI-------TAPG-DVVLCPNPSYPIHAFGFIMAGGVIRS----VPAEP--DEEFFPALERAVRHSIPKPIAL 170 (406)
T ss_pred HHHHHHHHH-------CCCC-CEEEECCCCHHHHHHHHHHHCCCEEE----CCCCC--CCCCCCCHHHHHHHCCCCCEEE
T ss_conf 999999996-------6999-99998077658789999981791586----05776--4333302999997458764499
Q ss_pred C-CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC--CCCCCCCCE----EECCCCCC-CCCC
Q ss_conf 2-33322221124621012322110223457213101100344445553101--112454530----21034444-4434
Q gi|254780432|r 181 L-IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY--EWANVKPDI----MTIAKGMG-GGFP 252 (392)
Q Consensus 181 i-~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~--e~~gi~PDi----~~~gK~l~-gG~P 252 (392)
| .-|-. -.|. ..+.+.+++|.++|++||+++|.||+...+.-.|..+-+ +..+. .|. -.+||..+ .|+=
T Consensus 171 il~~P~N-PTG~-v~~~~~l~~l~~~a~~~~i~visDEiY~~l~~~~~~~~s~~~~~~~-~~~~I~~~s~SK~~~m~G~R 247 (406)
T PRK09148 171 IVNYPSN-PTAY-VADLDFYKDLVAFAKKHDIWILSDLAYSEIYFDGNPPPSVLQVPGA-KDVTVEFTSMSKTFSMAGWR 247 (406)
T ss_pred EECCCCC-CCCC-CCCHHHHHHHHHHHHCCEEEEECCCCHHHHEECCCCCCCHHHCCCH-HHHHHHHCCCCHHCCCCCCC
T ss_conf 9778999-8887-6899999999987540548996342253513788767554317430-32211111420303675533
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH----HHHHCCHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 432100011122222332234532111100123345543201222101----1210000268899998867970755046
Q gi|254780432|r 253 IGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN----VINIAKILFEGLTAIKNRFPNMFLEVRG 328 (392)
Q Consensus 253 ~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~~v~~vRG 328 (392)
+|.+++.+++++.+.......+++.+...-.++.+.|+.- ++.+++ .+++-+.+.+.|++ .++ .-...
T Consensus 248 iG~~v~~~~li~~l~~~~~~~~~~~~~~~Q~aa~~aL~~~--~~~~~~~~~~y~~rrd~l~~~L~~-----~g~-~~~~P 319 (406)
T PRK09148 248 MGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGP--QDCIAEMREVYKKRRDVLVESFGR-----AGW-DIPPP 319 (406)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHH-----CCC-EECCC
T ss_conf 5999759999999999997643788789999999997596--789999999999999999998886-----697-64379
Q ss_pred CEEEEE-EEECC-----CHHHHHHHHHHC-CEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 400999-87249-----989999999968-9899626------89889955898688999999999999999985
Q gi|254780432|r 329 QGLLIG-LKTVF-----SPALLAAKFRDE-CLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 329 ~Gl~~~-ie~~~-----~~~~~~~~l~~~-Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.|.|+. +++.. +...++.++.++ ||.+.|. +++.+||+ +..+++.|++++++|++.+.++
T Consensus 320 ~G~~y~w~~l~~~~~~~~~~~f~~~Ll~~~gV~v~PG~~Fg~~g~~~iRls--fa~~~~~L~eal~Rl~~~l~~~ 392 (406)
T PRK09148 320 AASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGEGYVRIA--LVENEQRIRQAARNIKRFLSSA 392 (406)
T ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHCC
T ss_conf 836999988864347899999999999739999989732188998859999--7388999999999999999760
No 141
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.67 E-value=7.8e-15 Score=117.45 Aligned_cols=332 Identities=13% Similarity=0.142 Sum_probs=200.9
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-C-CCCCCCCCHHHHHHHHHHHHHCC------CCCCCCCCCCCC
Q ss_conf 799764641022674357878999999999999731-4-50687578189999986520101------333123565554
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-W-HVSNLYQSTQQEIFANHLIHSTF------ADRVFFTNSGAE 100 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~-~~~~~~~~~~~~~la~~L~~~~~------~~~v~f~~SGse 100 (392)
..|.+.||+.-| . .=-..++.|++|+.++++.. . +++.....+.+.+.++.+-+..+ .+.+..++++++
T Consensus 41 ~~~~DVI~L~iG--e-PDf~tP~~i~~a~~~a~~~~~~~y~~~~G~~eLReaIa~~~~~~~gv~~~dp~~eIivt~Ga~~ 117 (411)
T PRK06290 41 YPDMELIDMGVG--E-PDEMADESVVEVLCEEAKKPENRGYADNGIQELKEAAARYMEKVYGVKDLDPVTEVIHSIGSKP 117 (411)
T ss_pred CCCCCEEECCCC--C-CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHH
T ss_conf 879987778998--9-9998799999999999837998888987649999999999999719987897767998988899
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 03567776654320013478600234354656543212345532113479998643332221002688754101233222
Q gi|254780432|r 101 SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI 180 (392)
Q Consensus 101 A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav 180 (392)
|...++..-- .+| ..||..+-+|-.-........+.+..- |..+ ..-...|++++++.+.++.-++
T Consensus 118 al~~~~~all-------~pG-DeVli~~P~yp~Y~~~~~~~G~~~v~v----p~~~--e~~~~~d~~~l~~~i~~ktK~i 183 (411)
T PRK06290 118 ALAYLPSCFI-------NPG-DVTLMTVPGYPVTATHTKWYGGEVYNL----PLLE--ENNFLPDLDAIPKDVLEKAKLL 183 (411)
T ss_pred HHHHHHHHHC-------CCC-CEEEECCCCCHHHHHHHHHCCCEEEEE----ECCC--CCCCCCCHHHHHHHCCCCCEEE
T ss_conf 9999999966-------999-989986887365899999849989998----6566--6787659577198625576599
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC-CCCCCCC--E--EECCCCCC-CCCCC
Q ss_conf 23-33222211246210123221102234572131011003444455531011-1245453--0--21034444-44344
Q gi|254780432|r 181 LI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYE-WANVKPD--I--MTIAKGMG-GGFPI 253 (392)
Q Consensus 181 i~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e-~~gi~PD--i--~~~gK~l~-gG~P~ 253 (392)
++ -|- .-.| ...+++.++.|.++|++||+++|.|||...+--.|+.+.+- ..+. .| | -.+||..+ .|+-+
T Consensus 184 ilnsP~-NPTG-~v~s~e~l~~i~~~a~~~~i~vIsDEiY~~l~yd~~~~s~~s~~~~-~~~~I~i~S~SK~~~mtGwRi 260 (411)
T PRK06290 184 YLNYPN-NPTG-AVATKEFYKEVVDFAFENDIIVVQDAAYAALTFDGKPLSFLSVPGA-KEVGVEIHSFSKAYNMTGWRL 260 (411)
T ss_pred EECCCC-CCCC-EEECHHHHHHHHHHHHHCCCEEECHHHHHHHEECCCCCCCCCCCCC-CCEEEEECCCCCCCCCCEEEE
T ss_conf 988999-9986-1424899999999986428776423535551008977761025677-441799825774678722458
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC----HHHHHCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 3210001112222233223453211110012334554320122210----112100002688999988679707550464
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLE----NVINIAKILFEGLTAIKNRFPNMFLEVRGQ 329 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~----~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~ 329 (392)
|.+++.+++++.+.......+.+.....-.||.+.|+ .++..+ ..+++-+.+.+.|+++ + +.-....
T Consensus 261 G~~i~~~~li~~~~~i~~~~~~~~~~~~Q~aa~~aL~---~~~~~~~~~~~y~~rrd~l~~~L~~~-----G-~~~~~P~ 331 (411)
T PRK06290 261 AFVAGNELIVKAFAAVKDNTDSGQFIAIQKAGIYCLR---HPEITEKTRAKYERRLDKMVKILKEV-----G-FNAKMPG 331 (411)
T ss_pred EEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHC-----C-CEECCCC
T ss_conf 9886699999999999974647614999999999955---98999999999999999999999977-----9-8506887
Q ss_pred EEEEE-EEECC---------CHHHHHHHHH-HCCEEEEECC--CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 00999-87249---------9899999999-6898996268--98899558986889999999999999999852
Q gi|254780432|r 330 GLLIG-LKTVF---------SPALLAAKFR-DECLLTAPSS--DNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 330 Gl~~~-ie~~~---------~~~~~~~~l~-~~Gll~~~~~--~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
|.|.. +++.. ++..++.+|+ +.||.+.|.. ++-+||+ ++.++++|++++++|++..+.|+
T Consensus 332 GafY~~~~ip~~~~~~~~~~~~~efa~~LLee~~VavvPG~~fG~yvRis--~~~~~e~leea~~rl~~~~~~l~ 404 (411)
T PRK06290 332 GTFYLYVKAPKGTKSGIKFANAEEFSQYLIKEKLISTVPWDDAGHFLRMS--VTFEAKSIEEEDRILNEVKRRLS 404 (411)
T ss_pred EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHHH
T ss_conf 53699687877665777668999999999984899995655153559999--83889999999999999999872
No 142
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=1.4e-14 Score=115.79 Aligned_cols=323 Identities=15% Similarity=0.211 Sum_probs=199.3
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCCCCCCHHHHHH
Q ss_conf 9976464102267435787899999999999973145068757818999998652010--13331235655540356777
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHST--FADRVFFTNSGAESVECAIK 107 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~--~~~~v~f~~SGseA~e~Aik 107 (392)
.+.+.||+.++ -+.+|= .|++.+|+.++++.+ +.|..+...+|-+.|.+.. +.+.+..+|+.+|+...+++
T Consensus 36 ~~~~~i~L~~N--eNP~gp-sp~v~~a~~~~~~~~----~rYPd~~~~~Lr~aiA~~~gv~~~~I~v~nGs~e~i~~~~~ 108 (374)
T PRK05166 36 HVPRIAKLGSN--ENPLGP-SPALARLFPDIAELL----RLYPDPQGRALRAEIAASFGVPTDQIILGNGSEDLIAVICR 108 (374)
T ss_pred CCCCEEEECCC--CCCCCC-CHHHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHH
T ss_conf 89985880699--999898-999999999868753----76979878999999999968383019985689999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC-CCCCC
Q ss_conf 66543200134786002343546565432123455321134799986433322210026887541012332222-33322
Q gi|254780432|r 108 TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL-IEPIQ 186 (392)
Q Consensus 108 lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi-~Epv~ 186 (392)
..- .+| ++|+....+|-.-...+....+... . -|..+++ ..|++++.+.+.+++-.|+ .-|=.
T Consensus 109 a~~-------~pG-d~Vl~~~Ptf~~Y~~~~~~~G~~v~-~---vpl~~~~----~~d~~~l~~ai~~~tklv~l~nPnN 172 (374)
T PRK05166 109 AVL-------RPG-DRVVTLYPSFPLHEDYPTLMGARVE-R---VTVTPDL----TVDVDALLAAVARKPRMLMFSNPMN 172 (374)
T ss_pred HHH-------CCC-CEEEECCCCHHHHHHHHHHHCCEEE-E---EECCCCC----CCCHHHHHHHHCCCCCEEEEECCCC
T ss_conf 997-------399-9898778877789999998298159-9---7368667----9799999986156987899828989
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CCCCCCCCC-C-EE--ECCCCCC-CCCCCCC-CCCC
Q ss_conf 2211246210123221102234572131011003444455531-011124545-3-02--1034444-4434432-1000
Q gi|254780432|r 187 GEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AYEWANVKP-D-IM--TIAKGMG-GGFPIGA-CLAT 259 (392)
Q Consensus 187 g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~e~~gi~P-D-i~--~~gK~l~-gG~P~sa-v~~~ 259 (392)
--|. ..+++.++.+.+.|++ +.++|+||...-|-....+- ......-.. . |+ +|||..+ .|+=+|. ++..
T Consensus 173 -PTG~-~~~~~~l~~l~~~~~~-~~~vvvDEaY~ef~~~~~~~~~~~~~~~~~~n~IvlrSfSK~~glaGlRvGyai~~~ 249 (374)
T PRK05166 173 -PVGS-WLTPGALARLLDAVPP-ETLIVVDEAYAEYAAGDDYPSALTLLKNRGLPWVVLRTFSKAYGLAGLRIGYGLVSD 249 (374)
T ss_pred -CCCC-CCCHHHHHHHHHHCCC-CEEEEECHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCHHHHCCCCCEEEEECCC
T ss_conf -9876-5884779999974588-739995047899752788664798862047877999955565515777504541592
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECC
Q ss_conf 11122222332234532111100123345543201222101121000026889999886797075504640099987249
Q gi|254780432|r 260 NEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVF 339 (392)
Q Consensus 260 ~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~ 339 (392)
.++.+.+.... .+|+-|.++.++|.++|+- .+.+++..+.-..-++.+.+...+. ++ .-....|-++-++...
T Consensus 250 ~~i~~~l~~~~--~~~~v~~~aq~aa~aaL~~---~~~~~~~~~~~~~~R~~l~~~L~~~-g~-~v~ps~anFilv~~~~ 322 (374)
T PRK05166 250 PSLRAFLDRVR--TPFNANGIAQAAALAALDD---EEHLAKGVALALAERERMKKELAEM-GY-RVAPSRANFLFFDART 322 (374)
T ss_pred HHHHHHHHHHC--CCCCCCHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHHHC-CC-EECCCCCEEEEEECCC
T ss_conf 99999999834--9828699999999998569---9999999999999999999999977-79-4899866189986899
Q ss_pred CHHHHHHHHHHCCEEEEEC----CCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9899999999689899626----898899558986889999999999999999
Q gi|254780432|r 340 SPALLAAKFRDECLLTAPS----SDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 340 ~~~~~~~~l~~~Gll~~~~----~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
+...+.++|+++|+++++. .++.+|++ +=|.+|-++++++|++.+.
T Consensus 323 ~~~~~~~~L~~~gI~Vr~~~~~gl~~~lRIs---vgt~een~rll~aL~~il~ 372 (374)
T PRK05166 323 DASALAEALLRQGVIVKPWKQPGFETYIRVS---IGSPEENDHFMAALDEVLA 372 (374)
T ss_pred CHHHHHHHHHHCCCEEEECCCCCCCCEEEEE---ECCHHHHHHHHHHHHHHHH
T ss_conf 9999999998489199858989999989998---1899999999999999985
No 143
>PRK08912 hypothetical protein; Provisional
Probab=99.66 E-value=1.1e-14 Score=116.48 Aligned_cols=331 Identities=16% Similarity=0.171 Sum_probs=195.1
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC-CC-CCCCCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCCC
Q ss_conf 7997646410226743578789999999999997314-50-687578189999986520101----33-31235655540
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW-HV-SNLYQSTQQEIFANHLIHSTF----AD-RVFFTNSGAES 101 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~-~~-~~~~~~~~~~~la~~L~~~~~----~~-~v~f~~SGseA 101 (392)
+.++..||+.-| .-.+ -.++.|++|+.++++... ++ ......+.+..+++.+.+..+ .+ .++.++++++|
T Consensus 23 a~~~~~I~L~~G--~Pd~-~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~p~~~V~vt~Ga~~a 99 (387)
T PRK08912 23 AREHGAINLGQG--FPDD-PGPEDVRRAAADALLDGYNQYPPMMGLPELRQAVAAHYARFHGLDLDPMTEVMVTSGATEA 99 (387)
T ss_pred HCCCCCEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHH
T ss_conf 637992773697--8999-9889999999999852999898998729999999999999868998988729987668999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 35677766543200134786002343546565432123455321134799986433322210026887541012332222
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
...+++..- .+|. .||..+-+|.+.........+.+..- |..+ .. ..-|.+.+++.+.+++-+++
T Consensus 100 l~~~~~al~-------~pGD-~Vlv~~P~y~~y~~~~~~~G~~~~~v----~~~~--~~-~~~d~~~l~~~~~~~tk~ii 164 (387)
T PRK08912 100 LAAALLALV-------EPGD-EVVLFQPLYDSYLPIIRRAGGVPRLV----RLEP--PH-WRLPEAALAAAFSPRTKAVL 164 (387)
T ss_pred HHHHHHHHC-------CCCC-EEEEECCCCHHHHHHHHHCCCEEEEC----CCCC--CC-CCCCHHHHHHCCCCCCEEEE
T ss_conf 999999966-------9989-89994880811799999729889975----6558--77-78899999852788866999
Q ss_pred C-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC--CCCCCCCCE---EECCCCCC-CCCCCC
Q ss_conf 3-3322221124621012322110223457213101100344445553101--112454530---21034444-443443
Q gi|254780432|r 182 I-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY--EWANVKPDI---MTIAKGMG-GGFPIG 254 (392)
Q Consensus 182 ~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~--e~~gi~PDi---~~~gK~l~-gG~P~s 254 (392)
+ -| +.--|. ..+.+-+++|.++|++||+++|.||+...+--.|.-+-. ...+...-. -.+||.++ .|+=+|
T Consensus 165 l~~P-~NPTG~-v~s~e~l~~l~~~a~~~~i~vi~DEiY~~l~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~m~G~RiG 242 (387)
T PRK08912 165 LNNP-LNPAGK-VFPREDLALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMALPGMRERTVKIGSAGKIFSLTGWKVG 242 (387)
T ss_pred ECCC-CCCCCC-CCCHHHHHHHHHHHHHCCEEEEECCCHHHEEECCCCCCHHHCCCCCCCCEEEECCCCCEECCCCCCEE
T ss_conf 8999-898885-68699999999988657979980265233156786540444066766736998567775205533279
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC----HHHHHCCHHHHHHHHHHHHCCCEEEEECCCE
Q ss_conf 210001112222233223453211110012334554320122210----1121000026889999886797075504640
Q gi|254780432|r 255 ACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLE----NVINIAKILFEGLTAIKNRFPNMFLEVRGQG 330 (392)
Q Consensus 255 av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~----~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G 330 (392)
.+++.+++.+.+.......+++.++..-.++.+.|+. .+++++ ..++.-+.+.+.|+++ ++ .-+...|
T Consensus 243 ~~~~~~~li~~l~~~~~~~~~~~~~~~Q~a~a~~l~~--~~~~~~~~~~~~~~rr~~l~~~L~~~-----g~-~~~~~~G 314 (387)
T PRK08912 243 FVCAAPPLLRVLAKAHQFLTFTTPPNLQRAVAYGLGK--PDDYFEGMRADLARSRDRLAAGLRRI-----GF-PVLPSQG 314 (387)
T ss_pred EEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHHC-----CC-EEECCCC
T ss_conf 9983999999999998758557669999999999738--77999999999999999999999976-----98-5627981
Q ss_pred -EEEEEEEC-----CCHHHHHHH-HHHCCEEEEECC--------CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -09998724-----998999999-996898996268--------988995589868899999999999999998
Q gi|254780432|r 331 -LLIGLKTV-----FSPALLAAK-FRDECLLTAPSS--------DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 331 -l~~~ie~~-----~~~~~~~~~-l~~~Gll~~~~~--------~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
+++-+++. .+...++.+ +.+.||.+.|.. .+.|||+ +.-++++|++++++|.++++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~f~~~ll~e~gV~~vPG~~F~~~~~~~~~iRls--fa~~~e~l~ea~~RL~~~lk~ 386 (387)
T PRK08912 315 TYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFC--FAKRDATLDEAVERLAAAFRG 386 (387)
T ss_pred EEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHC
T ss_conf 589988514558998999999999996899998150128999999859999--799999999999999999836
No 144
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.66 E-value=1.7e-14 Score=115.30 Aligned_cols=319 Identities=14% Similarity=0.183 Sum_probs=202.6
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 764641022674357878999999999999731450687578189999986520101--333123565554035677766
Q gi|254780432|r 32 IPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTA 109 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aikla 109 (392)
++.||+.++ -+.+|- .|++++|+.++++.+.. |..+...+|.+.|.+..+ .+.+..+|+.+|+...+++..
T Consensus 29 ~~ii~ls~N--enp~g~-~~~v~~a~~~~~~~~~~----YPd~~~~~Lr~~iA~~~gv~~~~I~v~nGs~e~i~~~~~~~ 101 (359)
T PRK03158 29 SKIVKLASN--ENPFGC-SPRVTEALASEASQYAL----YPDGYAFELRTKVAKHLGVKEEQLIFGNGSDEVIQIISRAL 101 (359)
T ss_pred CCEEEEECC--CCCCCC-CHHHHHHHHHHHHHCCC----CCCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHH
T ss_conf 976895089--999999-99999999987873676----96988899999999986848677998478899999999998
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC-CCCCCCC
Q ss_conf 543200134786002343546565432123455321134799986433322210026887541012332222-3332222
Q gi|254780432|r 110 RRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL-IEPIQGE 188 (392)
Q Consensus 110 r~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi-~Epv~g~ 188 (392)
- .+|+. ++....+|-.-...+........ . -|..+ ...|++.+.+.+.++...++ .-|= .-
T Consensus 102 ~-------~~g~~-vvi~~P~f~~Y~~~a~~~g~~~~-~---vpl~d-----~~~dl~~~~~~i~~~tklv~l~nPn-NP 163 (359)
T PRK03158 102 L-------HEGTN-TVMANPTFSQYRHNAVIEGAEVR-E---VPLKD-----GIHDLDAMLEAIDENTKIVWICNPN-NP 163 (359)
T ss_pred H-------CCCCE-EECCCCEEEHHHHHHHHCCCEEE-E---ECCCC-----CCCCHHHHHHHCCCCCCEEEECCCC-CC
T ss_conf 0-------79981-11379820555999976285379-9---62677-----7669999997507588789974899-99
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCC
Q ss_conf 1124621012322110223457213101100344445553101-1124545302---1034444-443443210001112
Q gi|254780432|r 189 GGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY-EWANVKPDIM---TIAKGMG-GGFPIGACLATNEVA 263 (392)
Q Consensus 189 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~-e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~ 263 (392)
.|. ..+.+-++++.+.|.++ +++|+||...-|.....+... ....--|.++ +|+|..+ .|+-+|.+++++++.
T Consensus 164 TG~-~~~~~~l~~l~~~~~~~-~~vvvDEaY~ef~~~~~~~~~~~l~~~~~nviv~rsfSK~~~laGlRlGy~ia~~~li 241 (359)
T PRK03158 164 TGT-YVEKQKLLAFLEKVPKS-VLVVLDEAYYEYVTAEDYPQTLPLLEKYENLMILRTFSKAYGLAALRVGYGIADEELI 241 (359)
T ss_pred CCC-CCCCHHHHHHHHHCCCC-EEEEEEHHHHHHHCCCCCCCHHHHHHHCCCEEEECCCCHHCCCCCCCCEECCCCHHHH
T ss_conf 888-76523489999748577-2999722788873257862035676532562365156541068888522031899999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCHHH
Q ss_conf 22223322345321111001233455432012221011210000268899998867970755046400999872499899
Q gi|254780432|r 264 ACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSPAL 343 (392)
Q Consensus 264 ~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~~ 343 (392)
+.+.... ..|+-|.++.++|.++|+ ++++++...+.-+.-++.+.++.+++ ++ .-.-..+-++-+++..+...
T Consensus 242 ~~l~~~~--~~~~v~~~aq~aa~aal~---d~~~~~~~~~~~~~~~~~~~~~l~~~-g~-~~~ps~anF~l~~~~~~~~~ 314 (359)
T PRK03158 242 GQLEPAR--LPFNTSTIAQAAALAALE---DQAFIQECVKKNAEGLKQYYAFCKEY-GV-FYYPSQTNFVLIDLGIPGDE 314 (359)
T ss_pred HHHHHHC--CCCCCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CC-EECCCCCCEEEEECCCCHHH
T ss_conf 9999853--886856999999999957---99999999999999999999999868-88-89999850899868999999
Q ss_pred HHHHHHHCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999996898996268----9889955898688999999999999999
Q gi|254780432|r 344 LAAKFRDECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 344 ~~~~l~~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
+.+.|+++|+++++.. ++.+|++ +=|.+|.++++++|++.|
T Consensus 315 ~~~~L~~~gi~Vr~g~~fg~~~~iRIs---vgt~~en~~ll~aL~~il 359 (359)
T PRK03158 315 VFEYLLKKGYIVRSGAALGFPTGIRIT---VGLKEENDEIIELLAELL 359 (359)
T ss_pred HHHHHHHCCEEEEECCCCCCCCEEEEE---ECCHHHHHHHHHHHHHHC
T ss_conf 999998199399968989998989999---489999999999999869
No 145
>PRK09295 selenocysteine lyase; Validated
Probab=99.66 E-value=8e-14 Score=110.85 Aligned_cols=331 Identities=14% Similarity=0.139 Sum_probs=191.4
Q ss_pred CCCE--EEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHH------HHHHH-HHHHHHCC---CCCCCCCC
Q ss_conf 9976--4641022674357878999999999999731-45068757818------99999-86520101---33312356
Q gi|254780432|r 30 NGIP--FLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVSNLYQSTQ------QEIFA-NHLIHSTF---ADRVFFTN 96 (392)
Q Consensus 30 dG~~--yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~~~~~~~~------~~~la-~~L~~~~~---~~~v~f~~ 96 (392)
+|+. |+|-.++ ....++|++|+.+.+... ...+. ..+.. ..+-+ +++.+..+ .+.+.|+.
T Consensus 20 ~~~~~iYlDnaAt------t~~p~~Vi~a~~~~~~~~~~n~~~-~~~~~~~~a~~~~e~aR~~iA~~lga~~~~eIvFts 92 (406)
T PRK09295 20 NGLPLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHR-GIHTLSAQATEKMENVRKQASLFINARSAEELVFVR 92 (406)
T ss_pred CCCCEEEECCCCC------CCCCHHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf 8997599528853------789999999999999865698886-413899999999999999999974999989699937
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 5554035677766543200134786002343546565432123-455321134799986433322210026887541012
Q gi|254780432|r 97 SGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATI-SAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISN 175 (392)
Q Consensus 97 SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~-s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~ 175 (392)
++||++-.+++. +....-++|.. ||.-+--+|. .+..+ .+. .+.++.-..-.+.....-|++.+++.+.+
T Consensus 93 ~~Tea~N~~~~~---~~~~~~~~gd~-vi~s~~EH~s-~~~pw~~l~----~~~G~~v~~vp~~~~g~id~~~l~~~i~~ 163 (406)
T PRK09295 93 GTTEGINLVANS---WGNSNVRAGDN-IIISEMEHHA-NIVPWQMLC----ARVGAELRVIPLNPDGTLQLETLPALFDE 163 (406)
T ss_pred CCHHHHHHHHHH---HHHHHCCCCCE-EEEECCCCHH-HHHHHHHHH----HHHCCEEEEEECCCCCCCCHHHHHHHHCC
T ss_conf 816998888866---68860589898-9994664287-888999999----96496248980389984859999987537
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCCCC
Q ss_conf 332222333222211246210123221102234572131011003444455531011124545302103--444444344
Q gi|254780432|r 176 DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA--KGMGGGFPI 253 (392)
Q Consensus 176 ~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g--K~l~gG~P~ 253 (392)
++..|.+--+..+.|.+.| ++.+.++|+++|+++++|=+|+ +|.. -.+--.+..|+++++ | |.|-.-+
T Consensus 164 ~T~LVsv~~vsn~~G~i~p----v~~I~~~~~~~g~~~~vDaaQ~-~g~~----~idv~~l~~D~~~~S~HK-l~GP~G~ 233 (406)
T PRK09295 164 RTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHH----PVDVQALDCDFYVFSGHK-LYGPTGI 233 (406)
T ss_pred CCEEEEEEECCCCCCCCCC----HHHHHHHHHHCCCEEEEECCCC-CCCC----CCCHHHHHCCEEEEEHHH-CCCCCCE
T ss_conf 9639999713678887178----9999998875585489642346-6810----554666315479986142-2699814
Q ss_pred CCCCCCCCCCCCCCCCCCC------------CCC--------CC--CCCCHHHHHHHHHHHHC---CCCCCHHHHHCCHH
Q ss_conf 3210001112222233223------------453--------21--11100123345543201---22210112100002
Q gi|254780432|r 254 GACLATNEVAACMNQGSHG------------STY--------GG--NVLAMVLGEKVLNIIQS---DGFLENVINIAKIL 308 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~------------~T~--------~g--npl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l 308 (392)
|++.+++++.+.+.|...| .++ .| |..+.++..++++++.+ +++.++.+.+.+++
T Consensus 234 G~Lyv~~~~~~~l~P~~~GG~~~~~~~~~~~~~~~~~p~rfe~GT~n~~~i~gl~aAl~~~~~~g~~~i~~~~~~L~~~l 313 (406)
T PRK09295 234 GILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYA 313 (406)
T ss_pred EEEEECHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf 99998334563178631688631100345675535652220588876889999999999999718899999999999999
Q ss_pred HHHHHHHHHHCCCEEE-EECCCEEEEEEEECC-CHHHHHHHHHHCCEEEEEC------------CCCEEEECCCCCCCHH
Q ss_conf 6889999886797075-504640099987249-9899999999689899626------------8988995589868899
Q gi|254780432|r 309 FEGLTAIKNRFPNMFL-EVRGQGLLIGLKTVF-SPALLAAKFRDECLLTAPS------------SDNVVRILPPLTITAE 374 (392)
Q Consensus 309 ~~~L~~l~~~~~~~v~-~vRG~Gl~~~ie~~~-~~~~~~~~l~~~Gll~~~~------------~~~~irl~Ppl~it~~ 374 (392)
.++|++ .|++.. ....+....++.+.. .+..+...|-+.|+.++.. -+..||+++...-|++
T Consensus 314 ~~~L~~----~~~v~~~gp~~r~~ivsf~~~~~~~~~v~~~L~~~gI~vr~G~~Ca~~~~~~~~~~~~iRvS~~~ynT~e 389 (406)
T PRK09295 314 LSQLEQ----VPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHE 389 (406)
T ss_pred HHHHHC----CCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCHH
T ss_conf 999736----9998995887755079997389899999999854998997634333044576289967999788999999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999985
Q gi|254780432|r 375 EIHEGLERIERTAIKL 390 (392)
Q Consensus 375 eid~~i~~l~~al~~L 390 (392)
|||++++.|++..+-|
T Consensus 390 eId~lv~aL~~I~k~l 405 (406)
T PRK09295 390 EVDRLVAGLQRIHRLL 405 (406)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999972
No 146
>PRK08960 hypothetical protein; Provisional
Probab=99.66 E-value=2.6e-14 Score=114.02 Aligned_cols=331 Identities=15% Similarity=0.137 Sum_probs=194.1
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCC-CCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731-4506-87578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVS-NLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~-~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
..|++.|++.-|- -.+ --++.|++|+++.++.. .+++ .....+.+..+++.+.+..+ .|.+..++++++|.
T Consensus 29 ~~G~~vi~l~~G~--pdf-~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~d~I~vt~G~~~al 105 (387)
T PRK08960 29 AAGHDVIHLEIGE--PDF-TTAAPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGLDVDPERILVTPGGSGAL 105 (387)
T ss_pred HCCCCEEECCCCC--CCC-CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHH
T ss_conf 7799807889948--999-8899999999999853899889987729999999999999858999843289808669999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC-CCC
Q ss_conf 5677766543200134786002343546565432123455321134799986433322210026887541012332-222
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTA-AIL 181 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iA-avi 181 (392)
..+++.-- .+| +.||..+-+|-+.........+..... |..+. .-...|.+.+++.+..+.- .++
T Consensus 106 ~~~~~~l~-------~pG-D~Vlv~~P~Yp~~~~~~~~~~~~~~~v----p~~~~--~~~~~~~~~le~~~~~~~~~iil 171 (387)
T PRK08960 106 LLASSLLV-------DPG-KHWLLADPGYPCNRHFLRLVEGAAQLV----PVGPD--TRYQLTPALVERHWDSDSVGALV 171 (387)
T ss_pred HHHHHHHC-------CCC-CEEEEECCCCCCHHHHHHHHCCEEEEE----ECCCC--CCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999956-------999-879981787655289999853744999----75754--47788999999727878729997
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE---EECCCCCC-CCCCCCCCC
Q ss_conf 33322221124621012322110223457213101100344445553101112454530---21034444-443443210
Q gi|254780432|r 182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDI---MTIAKGMG-GGFPIGACL 257 (392)
Q Consensus 182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi---~~~gK~l~-gG~P~sav~ 257 (392)
.-| +.-.|. ..+++.+++|.++|++||+++|.|||...+--.+.... .....+.. -.+||.++ .|+=+|.++
T Consensus 172 ~nP-~NPTG~-v~s~~~l~~l~~~a~~~~~~vI~DEiY~~l~~~~~~~s--~~~~~~~~i~i~S~SK~~~~~G~RiG~~v 247 (387)
T PRK08960 172 ASP-ANPTGT-LLSRDELAALSQALKARGGHLVVDEIYHGLTYGVDAAS--VLEVDDSAFVLNSFSKYFGMTGWRLGWLV 247 (387)
T ss_pred CCC-CCCCCC-CCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCC--CCCCCCCEEEEEECCCCCCCCCCEEEEEE
T ss_conf 689-898863-14689999999987623977998446144125898653--11367877999506432557763058999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH----HHHHCCHHHHHHHHHHHHCCCEEEEECCCEEE-
Q ss_conf 0011122222332234532111100123345543201222101----12100002688999988679707550464009-
Q gi|254780432|r 258 ATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN----VINIAKILFEGLTAIKNRFPNMFLEVRGQGLL- 332 (392)
Q Consensus 258 ~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~- 332 (392)
+.++++..+.......+...+.+.-.++.+.++. +..++++. .+++-+.+.+.|++ .+ ....++..|.|
T Consensus 248 ~p~~~i~~~~~~~~~~~~~~~~~~Q~aa~~al~~-~~~~~~~~~~~~~~~rrd~l~~~l~~----~~-~~~~~~P~G~~y 321 (387)
T PRK08960 248 APPAAVPELEKLAQNLYISASSMAQHAALACFEP-ETIAILEARRAEFQRRRDFLLPALRE----LG-FGIAVEPQGAFY 321 (387)
T ss_pred ECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHH----CC-CCCCCCCCEEEE
T ss_conf 8899999999999854377987999999999621-55999999999999999999999997----59-960458986669
Q ss_pred EEEEEC---CCHHHHHHHHH-HCCEEEEEC---C----CCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 998724---99899999999-689899626---8----98899558986889999999999999999
Q gi|254780432|r 333 IGLKTV---FSPALLAAKFR-DECLLTAPS---S----DNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 333 ~~ie~~---~~~~~~~~~l~-~~Gll~~~~---~----~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
+=+++. .+...++..++ +.||.+.|. + ++.+||+ +.-++++|++++++|.++|+
T Consensus 322 ~w~~~~~~~~d~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~~Rls--~~~~~~~l~eal~RL~~~Lk 386 (387)
T PRK08960 322 LYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGHHVRFA--YTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred EEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHC
T ss_conf 978888889999999999998699999747220899999989999--76999999999999999966
No 147
>PRK07310 consensus
Probab=99.66 E-value=2.9e-14 Score=113.69 Aligned_cols=334 Identities=13% Similarity=0.123 Sum_probs=195.2
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC--CCC-CCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCC
Q ss_conf 7997646410226743578789999999999997314--506-87578189999986520101----3331235655540
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW--HVS-NLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAES 101 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~--~~~-~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA 101 (392)
.+|++.|++.-|- -.+ -..|.|++|++++++... +++ .....+.+..+++.+.+..+ .|.++.++++++|
T Consensus 27 ~~G~dvi~L~iG~--pdf-~~p~~i~~a~~~a~~~~~~~~Y~~~~G~~~lR~Aia~~~~~~~g~~v~pd~I~vt~G~~~a 103 (395)
T PRK07310 27 AQGRDILSLTLGE--PDF-VTPKNIQDAAIESIENGRASFYTVASGLPELKAAIATYFENFYGYHLSPNQIVVGTGAKFI 103 (395)
T ss_pred HCCCCEEECCCCC--CCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHH
T ss_conf 7799737768958--999-9899999999999828988878997473999999999989987899883209987788999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 35677766543200134786002343546565432123455321134799986433322210026887541012332222
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
...+++.-- .+| +.|+..+-+|...........+.+... |..+ ..--..|++.+++.+.+++-++|
T Consensus 104 l~~~~~~l~-------~pG-D~Vlv~~P~Y~~y~~~~~~~g~~~v~~----~~~~--~~~~~~d~~~l~~~~~~~~k~ii 169 (395)
T PRK07310 104 LYAFFMAVL-------NPG-DEVIIPTPYWVSYSDQVKMAEGVPVFV----QAKE--ENHFKVTVEQLEAARTSKTKVVL 169 (395)
T ss_pred HHHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHCCCEEEEE----ECCC--CCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 999999974-------999-989983787754699999759989997----5674--45745049999974658974999
Q ss_pred C-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC-CCCC--CCCC-C--EEECCCCCC-CCCCC
Q ss_conf 3-332222112462101232211022345721310110034444555310-1112--4545-3--021034444-44344
Q gi|254780432|r 182 I-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFA-YEWA--NVKP-D--IMTIAKGMG-GGFPI 253 (392)
Q Consensus 182 ~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~-~e~~--gi~P-D--i~~~gK~l~-gG~P~ 253 (392)
+ -| +.-.|. ..+++.+++|.++|++||+++|.|||...+--.|.-+- ...+ ++.. - +..+||..+ .|+=+
T Consensus 170 l~~P-~NPTG~-v~s~~~l~~l~~~a~~~~i~visDEiY~~l~~~g~~~~p~~~~~~~~~~~~i~~~s~SK~f~~~G~Ri 247 (395)
T PRK07310 170 LNSP-SNPTGM-IYSAEELRAIGEWAVEHDILILADDIYGRLVYNGNQFTPISSLSEAIRKQTIVINGVSKTYAMTGWRV 247 (395)
T ss_pred ECCC-CCCCCC-CCCCCHHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCEE
T ss_conf 8999-798562-66354146776556526879994365210014898888888841243257358840123567766548
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH---HCCCEEEEECCCE
Q ss_conf 3210001112222233223453211110012334554320122210112100002688999988---6797075504640
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKN---RFPNMFLEVRGQG 330 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~---~~~~~v~~vRG~G 330 (392)
|.+++.+++.+.+.......+...+.++-.++.+.++- .++.++ ++-+.+.++++.+.+ +.|+ +.-++-.|
T Consensus 248 G~~v~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~--~~~~~~---~~~~~~~~r~~~~~~~l~~~~g-~~~~~P~g 321 (395)
T PRK07310 248 GFAVGEPEIISAMSKIAGQTTSNLTAVSQYAAIEAFTG--SQSSVE---EMRLAFEERLNIIYPLLAQVPG-FEVVKPQG 321 (395)
T ss_pred EEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC--CHHHHH---HHHHHHHHHHHHHHHHHHCCCC-CEEECCCE
T ss_conf 99977999999999998650478138999999999968--889999---9999999999999998730899-68726986
Q ss_pred EEEE-EEEC--------CCHHHHHHHHH-HCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 0999-8724--------99899999999-6898996268----988995589868899999999999999998
Q gi|254780432|r 331 LLIG-LKTV--------FSPALLAAKFR-DECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 331 l~~~-ie~~--------~~~~~~~~~l~-~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
-++. .++. .+...++.++. +.||.+.|.. ++.+||. +..++++|++++++|++.+..
T Consensus 322 ~~~~w~~~~~~~~~~g~~d~~~~~~~ll~~~gV~v~PG~~FG~~~~vRl~--~a~~~~~l~eal~RL~~~l~s 392 (395)
T PRK07310 322 AFYLFPNVKKAMEMKGYTDVTDFTTAILEEVGVALVTGAGFGAPENVRLS--YATDLETLKEAVRRLHVFMES 392 (395)
T ss_pred EEEEEEECCCHHCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEE--ECCCHHHHHHHHHHHHHHHHH
T ss_conf 68981666511124788989999999998499999889766999988999--809999999999999999987
No 148
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.66 E-value=1.7e-14 Score=115.18 Aligned_cols=329 Identities=16% Similarity=0.198 Sum_probs=190.6
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC---CCCCCCCCHHHHHHHHHHHHHCC----CCC-CCCCCCCCC
Q ss_conf 7997646410226743578789999999999997314---50687578189999986520101----333-123565554
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW---HVSNLYQSTQQEIFANHLIHSTF----ADR-VFFTNSGAE 100 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~---~~~~~~~~~~~~~la~~L~~~~~----~~~-v~f~~SGse 100 (392)
.+|++.|++.-| -..+. .+|.|++|++++++... +.......+.+..+++.+.+..+ .+. ++.+++.++
T Consensus 26 ~~G~dvi~l~ig--~pdf~-~p~~i~~a~~~a~~~~~~~~Y~~~~G~~~lreaia~~~~~~~g~~~~p~~~vi~t~Ga~~ 102 (383)
T TIGR03540 26 AEGVDVISLGIG--DPDLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE 102 (383)
T ss_pred HCCCCEEECCCC--CCCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHH
T ss_conf 569985888899--89999-899999999999828887654998784999999999999986898996766998478259
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 03567776654320013478600234354656543212345532113479998643332221002688754101233222
Q gi|254780432|r 101 SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI 180 (392)
Q Consensus 101 A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav 180 (392)
|...+++.-- .+| ..|+..+-+|..-...+......... -|..+. .-...|++.+++.+.+++.++
T Consensus 103 al~~~~~~l~-------~pG-D~Vli~~P~Y~~y~~~~~~~g~~~v~----vpl~~~--~~~~~d~e~l~~~~~~~~k~i 168 (383)
T TIGR03540 103 GIAHIPLAFV-------NPG-DIVLVPDPGYPVYRIGTLFAGGEPYE----MPLKEE--NGFLPDFDAIPEDIAKKAKLM 168 (383)
T ss_pred HHHHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHCCCEEEE----EECCCC--CCCCCCHHHHHHHCCCCCEEE
T ss_conf 9999999966-------898-98998789860169999971985899----613357--798579999987452377499
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CCCCCCCCCC----EEECCCCCC-CCCCC
Q ss_conf 23-33222211246210123221102234572131011003444455531-0111245453----021034444-44344
Q gi|254780432|r 181 LI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AYEWANVKPD----IMTIAKGMG-GGFPI 253 (392)
Q Consensus 181 i~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~e~~gi~PD----i~~~gK~l~-gG~P~ 253 (392)
++ -| +.-.|. ..+++-+++|.++|++||+++|.||+..-+---|... .+-..+-..| +..+||.++ .|+=+
T Consensus 169 il~~P-~NPTG~-v~s~~~l~~i~~la~~~~i~iIsDEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~Ri 246 (383)
T TIGR03540 169 FINYP-NNPTGA-VAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRI 246 (383)
T ss_pred EECCC-CCCCCC-CCCCHHHHCCCCCCCCCCCEEECCHHHHHHCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCEE
T ss_conf 98999-897070-1210222201001245540576110255530389999771113665542577630235447887348
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH----HHHHCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 32100011122222332234532111100123345543201222101----12100002688999988679707550464
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN----VINIAKILFEGLTAIKNRFPNMFLEVRGQ 329 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~~v~~vRG~ 329 (392)
|.+++.+++++.+.......+.+.+...-.++.+.++.- ++++++ .++.-+.+.+.|+++ ++ .-.+..
T Consensus 247 G~~i~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~al~~~--~~~~~~~~~~~~~~r~~~~~~L~~~-----g~-~~~~p~ 318 (383)
T TIGR03540 247 GMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP--QDVVKEIRKIYQRRRDLLLEALKKI-----GI-DVEKPK 318 (383)
T ss_pred EEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHHC-----CC-EEECCC
T ss_conf 962289999999999975513567659999999998591--9999999999999999999999876-----98-773578
Q ss_pred E-EEEEEEECC--CHHHHHHHHH-HCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 0-099987249--9899999999-689899626------8988995589868899999999999999
Q gi|254780432|r 330 G-LLIGLKTVF--SPALLAAKFR-DECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 330 G-l~~~ie~~~--~~~~~~~~l~-~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
| ++.=+++.. +...++..++ +.||.+.|. +++.+||. +..++++|++++++|++.
T Consensus 319 g~~~~w~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~--~~~~~e~l~eal~RL~kl 383 (383)
T TIGR03540 319 ATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRIS--LTVPDERLEEAVARIKKL 383 (383)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--EECCHHHHHHHHHHHHCC
T ss_conf 05799898999989899999999839999988853288998869999--869999999999998449
No 149
>PRK08068 transaminase; Reviewed
Probab=99.65 E-value=1.6e-14 Score=115.46 Aligned_cols=328 Identities=12% Similarity=0.149 Sum_probs=192.1
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC---CCCCCCCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCC
Q ss_conf 7997646410226743578789999999999997314---50687578189999986520101----33-3123565554
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW---HVSNLYQSTQQEIFANHLIHSTF----AD-RVFFTNSGAE 100 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~---~~~~~~~~~~~~~la~~L~~~~~----~~-~v~f~~SGse 100 (392)
.+|++.|++.-| --.+ -.++.|++|+++.++... |.......+.+..+++.+.+..+ .+ .+..++++++
T Consensus 29 ~~G~~vi~l~~G--~Pd~-~~p~~i~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~p~~eI~vt~Ga~~ 105 (389)
T PRK08068 29 AEGHDVINLGQG--NPDQ-PTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKA 105 (389)
T ss_pred HCCCCCEECCCC--CCCC-CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 679991899998--8999-9899999999999738767888998580999999999999986899898880998278899
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 03567776654320013478600234354656543212345532113479998643332221002688754101233222
Q gi|254780432|r 101 SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI 180 (392)
Q Consensus 101 A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav 180 (392)
|...+++.-- .+| ..|+..+-+|.+..........+... -|..+ ..-...|++.+++.+.+++-++
T Consensus 106 al~~~~~al~-------~pG-D~Vlv~~P~Yp~y~~~~~~~g~~~~~----vpl~~--~~~~~~d~e~l~~~i~~~tk~i 171 (389)
T PRK08068 106 GLVELPQCLL-------NPG-DTALVPDPGYPDYLSGVALARAQFET----MPLIA--ENNFLPDYEKIPESVAEKAKLM 171 (389)
T ss_pred HHHHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHCCCEEEE----EECCC--CCCCCCCHHHHHHHCHHCCEEE
T ss_conf 9999999966-------999-98998078898649999971875689----96366--6798689999987431046599
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC-CCCCCCCCCCC----EEECCCCCC-CCCCC
Q ss_conf 23-3322221124621012322110223457213101100344445553-10111245453----021034444-44344
Q gi|254780432|r 181 LI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKL-FAYEWANVKPD----IMTIAKGMG-GGFPI 253 (392)
Q Consensus 181 i~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~-f~~e~~gi~PD----i~~~gK~l~-gG~P~ 253 (392)
++ -| ..-.|. ..+.+.+++|.++|++||+++|.|||...+.-.|.. ..+-...-..| +-.+||.++ .|+=+
T Consensus 172 il~~P-~NPTG~-v~~~~~l~~l~~la~~~~i~visDEiY~~l~~~~~~p~s~l~~~~~~~~~I~~~S~SK~~~~~G~Ri 249 (389)
T PRK08068 172 YLNYP-NNPTGA-VATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIEIYTLSKTFNMAGWRV 249 (389)
T ss_pred EECCC-CCCCCH-HCCHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEE
T ss_conf 98899-798461-2059999999998710777999626521114678766411036532013406610356557863117
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHCCCCCCHH----HHHCCHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 321000111222223322345321-111001233455432012221011----210000268899998867970755046
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTYGG-NVLAMVLGEKVLNIIQSDGFLENV----INIAKILFEGLTAIKNRFPNMFLEVRG 328 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~~g-npl~~aaa~a~L~~l~~~~l~~~~----~~~g~~l~~~L~~l~~~~~~~v~~vRG 328 (392)
|.+++++++.+.+.... .+++.+ ++..-.++.+.|.- .++.+++. +++-+.+.+.|+++ ++ .-...
T Consensus 250 G~~v~~~~~i~~l~~~~-~~~~~~~~~~~q~aa~~al~~--~~~~~~~~~~~~~~rr~~~~~~l~~~-----g~-~~~~P 320 (389)
T PRK08068 250 AFAVGNESVIEAINLLQ-DHLFVSLFGAIQDAAIEALLS--DQSCVQELVARYESRRNAFISACREI-----GW-EVDAP 320 (389)
T ss_pred EEEECCHHHHHHHHHHC-CCCEECCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHHC-----CC-EECCC
T ss_conf 99977999999999730-253004784999999999868--88899999999999999999999975-----97-60588
Q ss_pred CEEEEE-EEEC--CCHHHHHHHHHHC-CEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 400999-8724--9989999999968-9899626------8988995589868899999999999999
Q gi|254780432|r 329 QGLLIG-LKTV--FSPALLAAKFRDE-CLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 329 ~Gl~~~-ie~~--~~~~~~~~~l~~~-Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
.|.|+. +++. .+...++..+.++ ||.+.|. +++.+|++ +..++++|++++++|.+.
T Consensus 321 ~G~~y~w~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~vRl~--fa~~~e~l~ea~~RL~~l 386 (389)
T PRK08068 321 KGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVG--LLIDEERLREAINRIAKL 386 (389)
T ss_pred CEEEEEEEECCCCCCHHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEE--EECCHHHHHHHHHHHHHC
T ss_conf 813599786899989899999999709999987854378996969999--838999999999999724
No 150
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.65 E-value=2.6e-14 Score=114.05 Aligned_cols=324 Identities=18% Similarity=0.236 Sum_probs=194.7
Q ss_pred EECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCC-CCCCCCHH
Q ss_conf 96799764641022674357878999999999999731450687578189999986520101--3331235-65554035
Q gi|254780432|r 27 FSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFT-NSGAESVE 103 (392)
Q Consensus 27 ~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~-~SGseA~e 103 (392)
+-.+++++||+.++ -+.+|-. |.+++|+.++++.+ +.|..+...+|.+.+.+..+ .+++..+ |+.+|+..
T Consensus 30 ~g~~~~~ii~ls~n--enp~gp~-p~v~~a~~~~~~~~----~~YPd~~~~~Lr~aiA~~~gv~~e~ii~~gnGs~e~i~ 102 (369)
T PRK00950 30 YGIDPESIIKLGSN--ENPLGPS-PKAVEALIDEAPNI----HQYPEPDAPELREAISKYTGVPVENIIVGGDGADEIID 102 (369)
T ss_pred CCCCCCCEEEECCC--CCCCCCC-HHHHHHHHHHHHCC----CCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHH
T ss_conf 09896898881298--9986788-99999999875325----87999888999999999868197587997564999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC-C
Q ss_conf 677766543200134786002343546565432123455321134799986433322210026887541012332222-3
Q gi|254780432|r 104 CAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL-I 182 (392)
Q Consensus 104 ~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi-~ 182 (392)
..++.-- .+|. .|+..+.+|......+.....+..+ - +..+ ..-.-.|++++.+.+.+++.+++ .
T Consensus 103 ~l~~~~~-------~~Gd-~vl~~~P~y~~Y~~~a~~~G~~~~~-v---~~~~--~~~f~~d~~~l~~~i~~~tklv~l~ 168 (369)
T PRK00950 103 VLMRILI-------DEGD-EVIIPIPTFTYYEISARACGAKPVY-A---KFDR--EEDFKLDVESVLNAITDKTKIIFLC 168 (369)
T ss_pred HHHHHHH-------CCCC-EEEECCCCCHHHHHHHHHCCCEEEE-C---CCCC--CCCCCCCHHHHHHHCCCCCEEEEEE
T ss_conf 9999995-------7999-9998988730369999983982022-3---6771--2499889999997367676089980
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCC
Q ss_conf 33222211246210123221102234572131011003444455531011124545302---1034444-4434432100
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLA 258 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~ 258 (392)
-|=.= .|.. .+.+ .|+++|+++++++|+||+..-|.. .-+. +...--+.++ +|||..+ .|+=+|.+++
T Consensus 169 nPnNP-TG~~-~~~~---el~~l~~~~~~~vv~DEaY~ef~~--~~~~-~l~~~~~n~iv~~SfSK~~~laGlRlGy~i~ 240 (369)
T PRK00950 169 TPNNP-TGNL-IPEE---DIRKIVESTDALVFVDEAYIEFAE--YDLT-ELALEYDNVLVLRTFSKVFGLAGMRIGYGIM 240 (369)
T ss_pred CCCCC-CCEE-ECHH---HHHHHHHCCCEEEEECCCHHHHCC--CCHH-HHHHHCCCEEEEEECCHHHHCCCCEEEEEEC
T ss_conf 89998-7832-4799---987898718879994242675257--9715-6787458658984121554057750467646
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEC
Q ss_conf 01112222233223453211110012334554320122210112100002688999988679707550464009998724
Q gi|254780432|r 259 TNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTV 338 (392)
Q Consensus 259 ~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~ 338 (392)
.+++.+.+.... ..|+-|.++.++|.++|+ +.+.+++..+.-+.-++.|.+-..+.+.+-. .-..+.++-+++.
T Consensus 241 ~~~li~~l~~~~--~~~~v~~~aq~aa~aaL~---~~~~~~~~~~~~~~~R~~l~~~L~~l~~~~v-~ps~anFil~~~~ 314 (369)
T PRK00950 241 PKWIIEYMMRIK--PPFSLTRLSQAAAIAALR---DKEFIEKSIELGIESREYLYEGLKKFKPLKV-YPSEANYVLVDVK 314 (369)
T ss_pred CHHHHHHHHHHC--CCCCHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE-CCCCCEEEEEECC
T ss_conf 999999999856--875706999999999950---9588999999999999999999985799778-7898618999899
Q ss_pred C--CHHHHHHHHHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9--9899999999689899626------898899558986889999999999999999
Q gi|254780432|r 339 F--SPALLAAKFRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 339 ~--~~~~~~~~l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
. +...+++.|.++|+++++. +++.+|++ +-|.+|.++++++|++.++
T Consensus 315 ~~~~~~~~~~~Ll~~gI~Vr~g~~f~~~~~~~iRis---igt~~en~~ll~al~~il~ 369 (369)
T PRK00950 315 PGMTAKEFTEELLKKGVIVRDCTSFEGLGDYYIRVS---IGTLEENERFLEILKEIVE 369 (369)
T ss_pred CCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEE---ECCHHHHHHHHHHHHHHHC
T ss_conf 999999999999969959996877777898989998---0899999999999999859
No 151
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.65 E-value=4.7e-14 Score=112.33 Aligned_cols=341 Identities=15% Similarity=0.199 Sum_probs=194.6
Q ss_pred CCCEE----EECHHHHHHHCCCCCCHHHHHHHHHHHHHCCC---CCCCCCCHHHHHHHHHHHHHC-----CCCCCCCCCC
Q ss_conf 99764----64102267435787899999999999973145---068757818999998652010-----1333123565
Q gi|254780432|r 30 NGIPF----LDFASGIAVNSLGHSHPELVAILKSQSEKLWH---VSNLYQSTQQEIFANHLIHST-----FADRVFFTNS 97 (392)
Q Consensus 30 dG~~y----iD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~---~~~~~~~~~~~~la~~L~~~~-----~~~~v~f~~S 97 (392)
.|+.. |||.-| ..-+-.=.|+.++++.+++.+-.+ +......+.+.+.|+++.+.. +.|.+..+++
T Consensus 33 ~g~~~~~~~id~~~G--~pD~~~PtP~~i~~~~~~~~~~g~~~Yt~~~G~~eLReAia~~~~~~~g~~~d~~d~Iivt~G 110 (406)
T PRK06207 33 RGDPLPGRPVDFSHG--DVDAHEPTPGSLELFSQGVERGGVQAYTEYRGDLEIRELVAARLAEFTGAPVDARDGLIITPG 110 (406)
T ss_pred CCCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
T ss_conf 589889997237889--999999986999999999973899889998672999999999999986899998786998587
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHCCCC
Q ss_conf 5540356777665432001347860023435465654321234553211347999864333222-100268875410123
Q gi|254780432|r 98 GAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQA-KFCDLQSLKNQISND 176 (392)
Q Consensus 98 GseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~-~~~d~~~l~~~~~~~ 176 (392)
+.+|.-.++...- .+| +.||..+-+|-+.....-...+..... .. ........ ...|++.+++.+.++
T Consensus 111 ~~~al~~a~~al~-------~pG-DeViv~~P~y~~y~~~i~~~g~~~vpv-~l--~~~~~~~~~~~~d~d~le~~i~~~ 179 (406)
T PRK06207 111 TQGALFLAVASTV-------TRG-DKVAIVQPDYFANRKLVEFFEGEIVPV-QL--DYVSVDETRAGLDLDQLEAAFKAG 179 (406)
T ss_pred HHHHHHHHHHHHC-------CCC-CEEEEECCCCCCHHHHHHHCCCEEEEE-EC--CCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf 7999999999975-------899-879997898745799999829879998-56--776776344689999999745448
Q ss_pred CCCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCCCCC----EEECCCCCC-C
Q ss_conf 322223-3322221124621012322110223457213101100344445553101-11245453----021034444-4
Q gi|254780432|r 177 TAAILI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY-EWANVKPD----IMTIAKGMG-G 249 (392)
Q Consensus 177 iAavi~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~-e~~gi~PD----i~~~gK~l~-g 249 (392)
+-++|+ -| ..-.|. ..+++.+++|.++|++||+++|.|||...+--.|+-+.+ ......+| +..+||..+ .
T Consensus 180 tk~iil~nP-~NPTG~-v~s~e~l~~l~~la~~~~i~visDEiY~~l~ydg~~~~~~~~~~~~~~~~I~~~s~SK~~~m~ 257 (406)
T PRK06207 180 VRVFLFSNP-NNPAGV-VYSPEEIAQIAALARRYGATVIADQLYSRLRYAGASYTHLRALAVDPENVITIMGPSKTESLS 257 (406)
T ss_pred CEEEEECCC-CCCCCH-HCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECHHHHHCC
T ss_conf 769998899-798572-133999999999875579599996466454558988778766357767679975132443122
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 43443210001112222233223453211110012334554320122210112100002688999988679707550464
Q gi|254780432|r 250 GFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQ 329 (392)
Q Consensus 250 G~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~ 329 (392)
|+-+|.+++.+++++.+.......++..+.+.-+++.+.++.- +++.+.....-+..++.+-+.....+++. -..-.
T Consensus 258 G~RlG~~~~~~~li~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~--~~~~~~~~~~~~~~R~~l~~~l~~~~g~~-~~~P~ 334 (406)
T PRK06207 258 GYRLGVAFGSPAIIARMEKLQAIVSLRAAGYCQAVLRTWFDEP--PGWMEDRIAQHQAIRDDLIRVLRGIDGVF-ARAPE 334 (406)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHCCCCCE-ECCCC
T ss_conf 5624889789999999999998843684299999999999677--99999999999999999999985089957-45899
Q ss_pred -EEEEEEEEC---CCHHHHHHHHH-HCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -009998724---99899999999-689899626------89889955898688999999999999999985
Q gi|254780432|r 330 -GLLIGLKTV---FSPALLAAKFR-DECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 330 -Gl~~~ie~~---~~~~~~~~~l~-~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
|++.=+++. .+...+++.++ +.||.+.|. +.+.+||+ +..+++.|.+++++|.+.+.+.
T Consensus 335 gg~yl~~~l~~~~~~~~~f~~~Ll~e~gVav~PG~~FG~~~~~~vRls--fa~~~e~l~eal~RL~~~l~~y 404 (406)
T PRK06207 335 AGSYLFPRLPKLAVGLADFVKILRLQAGVVVTPGTEFSPHTADSIRLN--FSQDHAAAVAAVERIAALIERY 404 (406)
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHH
T ss_conf 148996888888999999999999858999988656589998979999--7398999999999999999985
No 152
>PRK07777 aminotransferase; Validated
Probab=99.65 E-value=2e-14 Score=114.81 Aligned_cols=332 Identities=14% Similarity=0.159 Sum_probs=193.2
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCC-CCCCCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCCC
Q ss_conf 799764641022674357878999999999999731-450-687578189999986520101----33-31235655540
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHV-SNLYQSTQQEIFANHLIHSTF----AD-RVFFTNSGAES 101 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~-~~~~~~~~~~~la~~L~~~~~----~~-~v~f~~SGseA 101 (392)
+.++..|+|.-|. -.+ --.|.|++|+.++++.. .++ +.....+.++++++.+.+..+ .| .++.++++++|
T Consensus 21 a~~~~~I~l~~G~--Pd~-~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~pe~eI~vt~Ga~~a 97 (386)
T PRK07777 21 AVRTGAVNLGQGF--PDE-DGPPEMLEAAQEAIAGGVNQYPPGPGIAPLRAAIAAQRRRRYGLEYDPDTEVLVTVGATEA 97 (386)
T ss_pred HCCCCCEEECCCC--CCC-CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHH
T ss_conf 5799988949978--998-5689999999999862899779987649999999999999819999998809987787999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 35677766543200134786002343546565432123455321134799986433322210026887541012332222
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
...+++.-- .+| +.|+..+-+|.+.............. -|..+. ..-...|++++++.+.+++-+++
T Consensus 98 l~~~~~~l~-------~pG-D~Vlv~~P~y~~y~~~~~~~g~~~v~----vpl~~~-~~~~~~d~~~l~~~~~~~tk~ii 164 (386)
T PRK07777 98 IAAAVLGLV-------EPG-DEVLLIEPYYDSYAAVIAMAGAHRVA----VPLVPD-GRGFALDVDALRAAVTPRTRALI 164 (386)
T ss_pred HHHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHHCCEEEE----CCCCCC-CCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 999999964-------899-87763499778769999983892561----343477-88846696999974687776999
Q ss_pred C-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC-CCCCCCCCC----EEECCCCCC-CCCCCC
Q ss_conf 3-332222112462101232211022345721310110034444555310-111245453----021034444-443443
Q gi|254780432|r 182 I-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFA-YEWANVKPD----IMTIAKGMG-GGFPIG 254 (392)
Q Consensus 182 ~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~-~e~~gi~PD----i~~~gK~l~-gG~P~s 254 (392)
+ -| +.--|. ..+++-+++|.++|++||+++|.||+...+.-.|.-+. ...++-.+| +-.+||.++ .|+=+|
T Consensus 165 l~~P-~NPTG~-v~s~e~l~~l~~la~~~~i~ii~DE~Y~~l~f~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~R~G 242 (386)
T PRK07777 165 VNSP-HNPTGT-VLSAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMAERTVTISSAAKTFNVTGWKIG 242 (386)
T ss_pred ECCC-CCCCCC-CCCHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCEE
T ss_conf 7999-698884-88899999999998642978865753775226887777365467865760243166676677662259
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC----HHHHHCCHHHHHHHHHHHHCCCEEEEECCCE
Q ss_conf 210001112222233223453211110012334554320122210----1121000026889999886797075504640
Q gi|254780432|r 255 ACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLE----NVINIAKILFEGLTAIKNRFPNMFLEVRGQG 330 (392)
Q Consensus 255 av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~----~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G 330 (392)
.+++.+++++.+.......|+..+...-.++.+.|+.- +.+++ ..+++-+.+.+.|+++ ++ .-....|
T Consensus 243 ~~v~~~~li~~~~~~~~~~~~~~~~~~Q~a~~~al~~~--~~~~~~~~~~~~~rrd~~~~~L~~~-----g~-~~~~p~G 314 (386)
T PRK07777 243 WACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHE--DAWVAALRDSLQAKRDRLAAGLAEA-----GF-AVHDSAG 314 (386)
T ss_pred EEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHC-----CC-EEECCCE
T ss_conf 99858999999999998636758658999999998687--5999999999999999999999976-----98-8717982
Q ss_pred E-EEEEEEC----CCHHHHHHHHHH-CCEEEEEC---------CCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 0-9998724----998999999996-89899626---------898899558986889999999999999999
Q gi|254780432|r 331 L-LIGLKTV----FSPALLAAKFRD-ECLLTAPS---------SDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 331 l-~~~ie~~----~~~~~~~~~l~~-~Gll~~~~---------~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
. ++-+++. .+...+++++.+ .||.+.|. +.+.||++ |.-++++|++++++|.+.++
T Consensus 315 ~~f~~~~~~~~~~~d~~~f~~~L~~~~gV~v~PG~~F~~~~~~g~~~vRls--f~~~~e~l~ea~~RL~~~~r 385 (386)
T PRK07777 315 TYFLCADPRPLGYDDGTAFCRALPERVGVAAIPMSAFCDPADAWNHLVRFA--FCKRDDTLDEAIRRLRALRR 385 (386)
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHC
T ss_conf 689988666689999999999999868999988744288987789979999--68999999999999999864
No 153
>PRK08175 aminotransferase; Validated
Probab=99.65 E-value=3.3e-14 Score=113.36 Aligned_cols=334 Identities=15% Similarity=0.167 Sum_probs=193.0
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-C--CCCCCCCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCC
Q ss_conf 799764641022674357878999999999999731-4--50687578189999986520101----33-3123565554
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-W--HVSNLYQSTQQEIFANHLIHSTF----AD-RVFFTNSGAE 100 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~--~~~~~~~~~~~~~la~~L~~~~~----~~-~v~f~~SGse 100 (392)
..|++.||+.-| --.+ -.+|+|++|+.+.++.. . |+......+.+..+++.+.+..+ .+ .++.++++++
T Consensus 26 ~~G~dvi~l~iG--~pdf-~~p~~i~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~~iivt~Ga~~ 102 (395)
T PRK08175 26 RRGEDIIDFSMG--NPDG-ATPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKE 102 (395)
T ss_pred HCCCCEEECCCC--CCCC-CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 579981877697--8999-8799999999999769998888997574999999999999986898787883998888799
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 03567776654320013478600234354656543212345532113479998643332221002688754101233222
Q gi|254780432|r 101 SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI 180 (392)
Q Consensus 101 A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav 180 (392)
|...+++..- .+| +.|+..+-+|-............... -|..++... ..|++.+.+....++.++
T Consensus 103 al~~~~~al~-------~pG-D~Vli~~P~Yp~y~~~~~~~g~~~~~----vpl~~~~~~--~~~le~~~~~~~~ktk~i 168 (395)
T PRK08175 103 GLAHLMLATL-------DHG-DTVLVPNPSYPIHIYGAVIAGAQVRS----VPLVEGVDF--FNELERAIRESYPKPKMM 168 (395)
T ss_pred HHHHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHHCCCEEE----EECCCCCCC--HHHHHHHHHHCCCCCEEE
T ss_conf 9999999727-------998-98997787740149999984784078----504577760--441999997268774599
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCCCCCE----EECCCCCC-CCCCC
Q ss_conf 23-3322221124621012322110223457213101100344445553101-112454530----21034444-44344
Q gi|254780432|r 181 LI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY-EWANVKPDI----MTIAKGMG-GGFPI 253 (392)
Q Consensus 181 i~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~-e~~gi~PDi----~~~gK~l~-gG~P~ 253 (392)
++ -| +.-.|. ..+++.+++|.++|++||+++|.||+..-+.--|.-+-+ -...-..|. ..+||.++ .|+=+
T Consensus 169 iln~P-~NPTG~-v~s~e~l~~i~~~a~~~~i~visDEiY~~l~~d~~~~~s~~~~~~~~~~~i~~~S~SK~f~~~G~Ri 246 (395)
T PRK08175 169 ILGFP-SNPTAQ-CVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRI 246 (395)
T ss_pred EECCC-CCCCCC-CCCHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCCE
T ss_conf 98899-998887-5799999999998886694898235314210288778685447456465489950322347775456
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEE
Q ss_conf 32100011122222332234532111100123345543201--2221011210000268899998867970755046400
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGL 331 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl 331 (392)
|.+++.+++++.+.......+++.++....++.+.|+.-++ +++.+..+++-+.+.+.|+++ ++. -.+..|-
T Consensus 247 G~ii~~~~~i~~~~~~~~~~~~~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~rr~~l~~~L~~~-----g~~-~~~P~G~ 320 (395)
T PRK08175 247 GFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-----GWM-VEMPKAS 320 (395)
T ss_pred EEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-----CCE-EECCCEE
T ss_conf 9996499999999999987046876799999999985989999999999999999999999875-----985-4068966
Q ss_pred -EEEEEECC-----CHHHHHHHHH-HCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -99987249-----9899999999-689899626------8988995589868899999999999999998
Q gi|254780432|r 332 -LIGLKTVF-----SPALLAAKFR-DECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 332 -~~~ie~~~-----~~~~~~~~l~-~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
++-+++.. +...++.+++ +.||.+.|. +++.+||+ +.-+++.|++++++|.+.++.
T Consensus 321 ~y~w~~~~~~~~~~~~~ef~~~ll~e~~V~v~PG~~Fg~~g~~~vRl~--~~~~~~~l~eal~Ri~~~~~a 389 (395)
T PRK08175 321 MYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFA--LIENRDRIRQAVRGIKAMFRA 389 (395)
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHH
T ss_conf 699688888767899899999999849899977733277999869999--728999999999999999986
No 154
>PRK06220 consensus
Probab=99.65 E-value=2.9e-14 Score=113.75 Aligned_cols=332 Identities=16% Similarity=0.169 Sum_probs=198.9
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCCCCC-CCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731-4506875-78189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVSNLY-QSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~~~~-~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
..|++.|++.-|-- .+ -..|.|++|+.+.++.. .+++... ..+.+..+++.+.+..+ .|.+++++++.+|.
T Consensus 28 ~~G~dvi~l~iG~p--df-~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lreaia~~~~~~~g~~~~pd~I~vt~G~~~al 104 (384)
T PRK06220 28 RQGRDIIHLEVGEP--DF-PTPECVCEAACAAIERGLTHYTHSLGLPELREAIAEHYRRRYGVDVDPDQVIVTSGTSPAM 104 (384)
T ss_pred HCCCCEEECCCCCC--CC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHH
T ss_conf 66998079999889--99-9789999999999854999989997869999999999999868998801289868889999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++.-- .+| +.|+..+-+|.+...........+.. -|..+ ..-...|++.+++.+.+++.++++
T Consensus 105 ~~~~~~l~-------~pG-D~Vlv~~P~Y~~~~~~~~~~g~~~v~----v~~~~--~~~~~~d~~~l~~~~~~~~k~i~l 170 (384)
T PRK06220 105 LMVFMALL-------NKG-DEVILSDPHYACYPNFVKFLGGTPVF----VPVYE--EDGFQYRPEAIRACLTPRTKAILI 170 (384)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCCCCHHHHHHCCCEEEE----ECCCC--CCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999981-------899-98997789887639999984983999----22463--237677999999747888739997
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCCCCCEEECCCCCC-CCCCCCCCCCC
Q ss_conf -3322221124621012322110223457213101100344445553101-11245453021034444-44344321000
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY-EWANVKPDIMTIAKGMG-GGFPIGACLAT 259 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~-e~~gi~PDi~~~gK~l~-gG~P~sav~~~ 259 (392)
-| +.-.|. ..+++.++++.++ ++++|.||+...+--.|..+.. +..+-.-=+-.+||.++ .|+-+|.+++.
T Consensus 171 ~~P-~NPtG~-v~s~e~l~~l~~~----~~~vIsDEiY~~l~~~~~~~s~~~~~~~~i~~~S~SK~~~~~G~RiG~~i~~ 244 (384)
T PRK06220 171 NSP-SNPTGH-VLSPERLAGIASL----GIPIISDEIYHGLVYEGREHSILEFTDNAFVLNGFSKLYAMTGWRLGYLIVP 244 (384)
T ss_pred CCC-CCCCCC-CCCHHHHHHHHHH----CCEEEECCCHHHHCCCCCCCCHHHCCCCEEEEEECHHHCCCCCCCEEEEEEC
T ss_conf 289-998786-7719999998730----9889724626864158998882114787899974235307865356999988
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC--CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEE-EE
Q ss_conf 111222223322345321111001233455432012--221011210000268899998867970755046400999-87
Q gi|254780432|r 260 NEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSD--GFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIG-LK 336 (392)
Q Consensus 260 ~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~--~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~-ie 336 (392)
+++++.+.......+...+.++-.++.+.|+..++. .+.+..+++-+.+.+.|+++ +....+...|.++. ++
T Consensus 245 ~~~i~~l~~~~~~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~P~g~~y~~~~ 319 (384)
T PRK06220 245 PSCVRALQKLHQNFFICANSVVQEAGIAALKQAQEDVARMRQIYNERRQYMIKRLREM-----GFGIRVEPTGAFYVLAD 319 (384)
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCCCCCCEEEEEEEE
T ss_conf 9999999999986157898799999999995839999999999999999999999975-----99856389852688577
Q ss_pred E---CCCHHHHHHHHH-HCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 2---499899999999-689899626------89889955898688999999999999999985
Q gi|254780432|r 337 T---VFSPALLAAKFR-DECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 337 ~---~~~~~~~~~~l~-~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+ ..+...++..+. +.||.+.|. +++.+||. +..++++|++++++|++++.+-
T Consensus 320 ~~~~~~d~~~~~~~ll~~~gV~v~PG~~Fg~~~~g~iRl~--f~~~~e~l~ea~~RL~~~l~~~ 381 (384)
T PRK06220 320 ARHLSGDSYALAFDILEEAGVGVTPGIDFGNGGEGYLRFS--YANSLENIAEGLDRLEQFLEKR 381 (384)
T ss_pred CCCCCCCHHHHHHHHHHHCCEEEECCHHCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHH
T ss_conf 8878999999999999839999977810088999979999--7099999999999999999987
No 155
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.64 E-value=4.1e-14 Score=112.71 Aligned_cols=337 Identities=13% Similarity=0.081 Sum_probs=191.6
Q ss_pred EEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC-CHHHHHHHHHHHHHCC-------CCCCCCCCC
Q ss_conf 99679976464102267435787899999999999973145068757-8189999986520101-------333123565
Q gi|254780432|r 26 LFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQ-STQQEIFANHLIHSTF-------ADRVFFTNS 97 (392)
Q Consensus 26 i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~-~~~~~~la~~L~~~~~-------~~~v~f~~S 97 (392)
+....|++.||+.-| .-.+. -.+.|++|+++.++...++++... .+.++.+++.+.+..+ .+.++.+++
T Consensus 23 ~~~~~g~~iI~L~iG--~Pd~~-~P~~v~ea~~~al~~~~~Y~~~~G~~~LReAia~~~~~~~~~~~~~dp~~~I~vt~G 99 (394)
T TIGR03538 23 VTPPASLPPIALSIG--EPKHA-TPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNG 99 (394)
T ss_pred HHHHCCCCEEECCCC--CCCCC-CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
T ss_conf 034089987878488--89999-779999999998438889999988699999999999997398877896776998988
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 5540356777665432001347860-023435465654321234553211347999864333222100268875410123
Q gi|254780432|r 98 GAESVECAIKTARRYHYMAGKTNKF-RIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISND 176 (392)
Q Consensus 98 GseA~e~Aiklar~~~~~~g~t~r~-~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~ 176 (392)
+++|...+++..- .+|.. .|+..+-.|......+....+.+.+ -|..+ ..-...|++++++.+.++
T Consensus 100 a~~al~~~~~~l~-------~pGd~~~V~~p~P~Y~~y~~~~~~~g~~~~~----v~~~~--e~~~~~d~~~l~~~~~~~ 166 (394)
T TIGR03538 100 TREALFAFAQAVI-------NPGQAPLVVMPNPFYQIYEGAALLAGAEPYF----LNCTA--ENGFLPDFDAVPESVWRR 166 (394)
T ss_pred HHHHHHHHHHHHC-------CCCCCEEEEECCCCCCCCHHHHHHCCCEEEE----CCCCC--CCCCCCCHHHHHHHCCCC
T ss_conf 8999999999972-------9998108994788664529999975998997----58673--458888999998745236
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC--CC-CC---CCCC-CC-C-EE--ECCC
Q ss_conf 3222233322221124621012322110223457213101100344445553--10-11---1245-45-3-02--1034
Q gi|254780432|r 177 TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKL--FA-YE---WANV-KP-D-IM--TIAK 245 (392)
Q Consensus 177 iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~--f~-~e---~~gi-~P-D-i~--~~gK 245 (392)
+-++++-.=+.-.|. ..+++.++++.++|++||+++|.||+...+.-.+.. .+ ++ ..+. .. . |+ .+||
T Consensus 167 tk~iil~sP~NPTG~-v~s~~~l~~l~~~a~~~~i~iisDE~Y~~l~~d~~~~p~~~~~~~~~~~~~~~~~~i~~~S~SK 245 (394)
T TIGR03538 167 CQLLFVCSPGNPTGA-VLSLETLKKLIELADQYGFIIASDECYSELYFDEANPPAGLLQAAAALGRDDFRRCLVFHSLSK 245 (394)
T ss_pred CEEEEECCCCCCCCC-CCCHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCC
T ss_conf 659998899999897-7787999999999732676999806833278578889737877776625444476799955654
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEE
Q ss_conf 444-4434432100011122222332234532111100123345543201222101121000026889999886797075
Q gi|254780432|r 246 GMG-GGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFL 324 (392)
Q Consensus 246 ~l~-gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~ 324 (392)
..+ .|+=+|.+++.+++++.+.........+.+...-.++.+.+ ..+.. +++.-+.++++.+.+.+.....+.
T Consensus 246 ~~~~~G~RiG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~a~~aa~---~~~~~---~~~~r~~~~~r~~~~~~~L~~~~~ 319 (394)
T TIGR03538 246 RSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPPPTQLASIAAW---NDEQH---VRENRALYREKFAAVLEILGPVLD 319 (394)
T ss_pred CCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH---CCHHH---HHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 445467517999579999999998522374268999999999984---89899---999999999999999998642796
Q ss_pred EECCCE-EEEEEEECCCHHHHHHHH-HHCCEEEEEC------------CCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 504640-099987249989999999-9689899626------------89889955898688999999999999999
Q gi|254780432|r 325 EVRGQG-LLIGLKTVFSPALLAAKF-RDECLLTAPS------------SDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 325 ~vRG~G-l~~~ie~~~~~~~~~~~l-~~~Gll~~~~------------~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
-.+..| +++=+++..+...++.++ .+.||.+.|. |.+.|||+ +.-++++|.+++++|++.+
T Consensus 320 ~~~P~Gg~y~w~~~~~~~~~f~~~ll~e~gV~v~PG~~F~~~~~~~~~G~g~iR~s--~~~~~e~l~ea~~Rl~~fl 394 (394)
T TIGR03538 320 LELPDAGFYLWPKVPGDDEAFARALYEEENVTVLPGRYLSREAEGVNPGAGRVRIA--LVAPLEECVEAAERIRRFI 394 (394)
T ss_pred CCCCCEEEEEEEECCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHC
T ss_conf 25798548999968999999999999868999987734165545788899989999--7598999999999999869
No 156
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.64 E-value=4.2e-14 Score=112.64 Aligned_cols=339 Identities=15% Similarity=0.132 Sum_probs=190.0
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-C--CCCCCCCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCC
Q ss_conf 799764641022674357878999999999999731-4--50687578189999986520101----33-3123565554
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-W--HVSNLYQSTQQEIFANHLIHSTF----AD-RVFFTNSGAE 100 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~--~~~~~~~~~~~~~la~~L~~~~~----~~-~v~f~~SGse 100 (392)
..|++.||+.-| --.+ --++.|++|+.+++++. . ++......+.+.++++.+.+..+ .+ .++.++++++
T Consensus 30 ~~G~~vi~l~iG--~Pd~-~~P~~i~~a~~~a~~~~~~~gY~~~~G~~eLR~aia~~~~~~~g~~~~p~~~I~vt~Ga~~ 106 (403)
T PRK08636 30 RAGEDVIDFSMG--NPDG-PTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPDTEVVATMGSKE 106 (403)
T ss_pred HCCCCEEECCCC--CCCC-CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHH
T ss_conf 659986889796--8999-8799999999999769988789997472999999999999970999999874999179899
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 03567776654320013478600234354656543212345532113-----4799986433322210026887541012
Q gi|254780432|r 101 SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQY-----LEGFGPKIEGFDQAKFCDLQSLKNQISN 175 (392)
Q Consensus 101 A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~-----~~~~~p~~~~~~~~~~~d~~~l~~~~~~ 175 (392)
|.-.+++..- .+| +.||..+-+|-..........+.... ...|.+.. ..-..+++.+.+....
T Consensus 107 al~~~~~al~-------~pG-D~Vli~~P~Y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~----~~~~~~le~~~~~~~~ 174 (403)
T PRK08636 107 GYVHLVQAIT-------NPG-DVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDE----DKFFENLEKALRESSP 174 (403)
T ss_pred HHHHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCH----HHHHHCHHHHHHHCCC
T ss_conf 9999999977-------999-989977888703899999849968997433577742466----6520258998762688
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCCCCCEE----ECCCCCC-C
Q ss_conf 33222233322221124621012322110223457213101100344445553101-1124545302----1034444-4
Q gi|254780432|r 176 DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY-EWANVKPDIM----TIAKGMG-G 249 (392)
Q Consensus 176 ~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~-e~~gi~PDi~----~~gK~l~-g 249 (392)
++-++|+-.=..-.|. ..+++.+++|.++|++||+++|.|||...+--.|.-+-+ -...-.+|.+ .+||..+ .
T Consensus 175 ktk~iiln~P~NPTG~-v~s~~~l~~i~~la~~~~i~visDEiY~~l~~~g~~~~s~~~~~~~~~~~i~~~s~SK~~~~~ 253 (403)
T PRK08636 175 KPKYVVVNFPHNPTTA-TVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMA 253 (403)
T ss_pred CCEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHCCEEEEECCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 7179998999899887-889999999999998659389962640000017987874102753001332224420025776
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 434432100011122222332234532111100123345543201--222101121000026889999886797075504
Q gi|254780432|r 250 GFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVR 327 (392)
Q Consensus 250 G~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vR 327 (392)
|+=+|.+++++++.+.+.......+++.+...-.++...|+.-++ +.+.+..+++-+.+.+.|++ .++ .-..
T Consensus 254 G~RiG~ii~~~~li~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~y~~rr~~l~~~l~~-----~g~-~~~~ 327 (403)
T PRK08636 254 GWRVGFVVGNKKLIGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYEKRRDVLIKSFEN-----AGW-ELQK 327 (403)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-----CCC-EECC
T ss_conf 4128999739999999999998634685689999999998398999999999999999999999986-----597-0037
Q ss_pred CCEEEEE-EEEC-----CCHHHHHHHHH-HCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 6400999-8724-----99899999999-689899626------898899558986889999999999999999852
Q gi|254780432|r 328 GQGLLIG-LKTV-----FSPALLAAKFR-DECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 328 G~Gl~~~-ie~~-----~~~~~~~~~l~-~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
..|-++. +++. .+...++.++. +.||.+.|. +++.+|++ +..++++|++++++|++.++++.
T Consensus 328 P~g~~y~w~~l~~~~~~~~~~ef~~~ll~~~gV~v~PG~~Fg~~g~~~vRis--f~~~~e~l~ea~~Rl~~~l~e~~ 402 (403)
T PRK08636 328 PRASMFVWAKIPEPFRHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIA--LIENENRIRQAARNIKKFLKEFE 402 (403)
T ss_pred CCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 8810389787875447899899999999749799988753288999879999--71899999999999999999844
No 157
>pfam00266 Aminotran_5 Aminotransferase class-V. This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-.
Probab=99.64 E-value=5.1e-14 Score=112.10 Aligned_cols=315 Identities=16% Similarity=0.184 Sum_probs=187.0
Q ss_pred EEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCHH------HHHHH-HHHHHHCC---CCCCCCCCCCCCCH
Q ss_conf 464102267435787899999999999973145068-757818------99999-86520101---33312356555403
Q gi|254780432|r 34 FLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQSTQ------QEIFA-NHLIHSTF---ADRVFFTNSGAESV 102 (392)
Q Consensus 34 yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~~~~------~~~la-~~L~~~~~---~~~v~f~~SGseA~ 102 (392)
|+|-.++ ..-.|++++++.+.+.+.. .++ ...+.. ..+-+ +.+.+..+ .+.+.|+.|+||++
T Consensus 2 YlD~aat------tp~~~~V~~~~~~~~~~~~-~np~s~~~~~~~~~~~~~e~aR~~ia~~lga~~~~~i~ft~~~Te~~ 74 (371)
T pfam00266 2 YLDSAAT------TQKPQAVLDALQEYYTDYN-GNVHRGVHHLGKEATQAYEEAREKVAEFINAPSDEEIIFTSGTTEAI 74 (371)
T ss_pred CCCCCCC------CCCCHHHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHH
T ss_conf 5768123------6899999999999998648-88565214999999999999999999971939989799848878998
Q ss_pred HHHHHHHH-HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 56777665-43200134786002343546565432123455321134799986433322210026887541012332222
Q gi|254780432|r 103 ECAIKTAR-RYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 103 e~Aiklar-~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
..+++-.. .+ ...+.||....-|+........+. .+.+..-..-.+.....-|++.+++.+.+++..|.
T Consensus 75 n~~~~~~~~~~------~~gd~ii~s~~eh~s~~~~~~~l~----~~~g~~v~~i~~~~~g~i~~~~l~~~i~~~t~lv~ 144 (371)
T pfam00266 75 NLVAISLGRRL------KPGDEILVTEMEHHANLVPWQELA----KRTGATVRVIPVDPNGLLDLDALEKLLTPRTKLVA 144 (371)
T ss_pred HHHHHHHHHCC------CCCCEEEEECCCCCCHHHHHHHHH----HHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 87652345314------998999995477552365999987----62495699935698986989999985689964999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEC--CCCCCCCCCCCCCCCC
Q ss_conf 33322221124621012322110223457213101100344445553101112454530210--3444444344321000
Q gi|254780432|r 182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTI--AKGMGGGFPIGACLAT 259 (392)
Q Consensus 182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~--gK~l~gG~P~sav~~~ 259 (392)
+--+....|.+.| ++.+.++|+++|+++++|=+|+ +|.. .+-.+.+ .+|++++ =| +.|..-+|++..+
T Consensus 145 ~~~v~n~tG~~~p----i~~i~~~~~~~g~~~~vDa~q~-~g~~--~id~~~~--g~D~~~~s~hK-~~GP~G~G~L~v~ 214 (371)
T pfam00266 145 ITHVSNVTGTVNP----VEEIGKLAHEYGALVVVDAAQA-VGHR--PIDVQAL--GVDFLAFSGHK-LYGPTGIGVLYGR 214 (371)
T ss_pred EECCCCCCCEECH----HHHHHHHHHHCCCEEEEECCCC-CCCC--CCCCCCC--CCCEEEEECCC-CCCCCCEEEEEEC
T ss_conf 9676677882405----5569999863691799875123-6752--2032324--36569986555-6899843999981
Q ss_pred CCCCCCCCCCCCCCC-------------------C---CCCCCCHHHHHHHHHHHHC---CCCCCHHHHHCCHHHHHHHH
Q ss_conf 111222223322345-------------------3---2111100123345543201---22210112100002688999
Q gi|254780432|r 260 NEVAACMNQGSHGST-------------------Y---GGNVLAMVLGEKVLNIIQS---DGFLENVINIAKILFEGLTA 314 (392)
Q Consensus 260 ~~i~~~~~~~~~~~T-------------------~---~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~ 314 (392)
++..+.+.|...+.. | +-|..+.++..++++++.+ +++.++.+.+.+++.++|++
T Consensus 215 ~~~~~~l~p~~~g~~~~~~~~~~~~~~~~~~~~~~e~GT~n~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~l~~~L~~ 294 (371)
T pfam00266 215 RDLLEKLPPWKGGGGMIDLVSLLQETTFADAPSKFEAGTPNIAGIIGLGAALDYLAEIGLEAIEKHERELAAYLYERLLA 294 (371)
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 57784578756799843565422235545614440478998788999999999999819899999999999999999855
Q ss_pred HHHHCCCEEE--EE-CCCEEEEEEEEC-CCHHHHHHHHHHCCEEEEEC------------CCCEEEECCCCCCCHHHHHH
Q ss_conf 9886797075--50-464009998724-99899999999689899626------------89889955898688999999
Q gi|254780432|r 315 IKNRFPNMFL--EV-RGQGLLIGLKTV-FSPALLAAKFRDECLLTAPS------------SDNVVRILPPLTITAEEIHE 378 (392)
Q Consensus 315 l~~~~~~~v~--~v-RG~Gl~~~ie~~-~~~~~~~~~l~~~Gll~~~~------------~~~~irl~Ppl~it~~eid~ 378 (392)
+ |.+.. +. .-..-+..+.+. .+...+...|.++||.+... .+..||+++...-|++|||+
T Consensus 295 ~----~~~~i~~~~~~~~~~ivsf~~~~~~~~~~~~~L~~~gI~vs~G~~Cs~~~l~~~~~~g~iRiS~~~ynT~eeId~ 370 (371)
T pfam00266 295 I----PGIRLVPAVAERRPSIISFNFPGVHPHDVATLLDERGIAVRSGHHCAQPLMERLGVHGTLRASLYFYNTEEEVDR 370 (371)
T ss_pred C----CCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHC
T ss_conf 9----998994986246688899995990999999997348819976400032444876799889997688799999825
Q ss_pred H
Q ss_conf 9
Q gi|254780432|r 379 G 379 (392)
Q Consensus 379 ~ 379 (392)
+
T Consensus 371 L 371 (371)
T pfam00266 371 L 371 (371)
T ss_pred C
T ss_conf 9
No 158
>PRK06507 consensus
Probab=99.64 E-value=3.5e-14 Score=113.21 Aligned_cols=333 Identities=14% Similarity=0.173 Sum_probs=199.5
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCC-CCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 799764641022674357878999999999999731-4506-87578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVS-NLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~-~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
.+|++.|++.-| .-.+ ..+|++++|+++.+... ..++ .....+.++++++.+.+..+ .+.+..++++++|.
T Consensus 28 ~~G~~vi~L~iG--~pd~-~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~p~~I~vt~G~~~al 104 (400)
T PRK06507 28 AEGIKVVSLSSG--EPDF-PTPAHAIEAAHAAALAGDTKYPPMDGTPALKAAIQRKFKRENNLDYDPSEIVVSNGGKQVI 104 (400)
T ss_pred HCCCCEEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHH
T ss_conf 779973777893--8899-8889999999999745899879987849999999999999848999824389817829999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++..- .+| ..|+..+-+|.+.........+.+... |..+ ..-...|.+.+++.+.+++-++|+
T Consensus 105 ~~~~~~l~-------~pG-D~Vli~~P~y~~y~~~~~~~g~~~v~v----~l~~--~~g~~~d~~~le~~~~~~tk~iil 170 (400)
T PRK06507 105 FNAMMATC-------NPG-DEVVIPAPSWVSYADIVKLAGGVPVAV----PCRE--ETGFKLRPEDLEAAITPRTKWLFL 170 (400)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCCHHHHHHHHCCCEEEEE----ECCC--CCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999966-------999-989990587740579999819915997----5670--117641699999746756649997
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCC-CCEEEECCCCCCCCCCCCCCCCCCCCCCCC----EE---ECCCCCC-CCCC
Q ss_conf -332222112462101232211022345-721310110034444555310111245453----02---1034444-4434
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDI-DALLIFDEVQTGYGRTGKLFAYEWANVKPD----IM---TIAKGMG-GGFP 252 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GRtG~~f~~e~~gi~PD----i~---~~gK~l~-gG~P 252 (392)
-| ..-.|. ..+++.+++|.++|++| ++++|.||+...+.-.|.-+.+ ...+.|| ++ .+||..+ .|+=
T Consensus 171 ~~P-~NPTG~-v~s~~~l~~i~~~a~~~~~v~visDEiY~~l~~~~~~~~s-~~~~~p~~~~~~i~~~S~SK~~~~~G~R 247 (400)
T PRK06507 171 NFP-NNPTGA-ACTRAEMAAIAEVMLRHPHVWIMTDDIYEHLVYDGFEFCT-IAEVEPRLYDRVLTMNGVSKAYAMTGWR 247 (400)
T ss_pred CCC-CCHHHH-HHHHHHHHHHHHHHHHCCCCEECCCCCHHHHEECCCCCCC-HHHHCCCCCCCEEEEECCCCCCCCCCCC
T ss_conf 499-293128-8647799999986653168214056642441208977887-8885856455358983354444676510
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC----HHHHHCCHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 43210001112222233223453211110012334554320122210----11210000268899998867970755046
Q gi|254780432|r 253 IGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLE----NVINIAKILFEGLTAIKNRFPNMFLEVRG 328 (392)
Q Consensus 253 ~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~----~~~~~g~~l~~~L~~l~~~~~~~v~~vRG 328 (392)
+|.+++.+++.+.+.......+.+-+.++-.++.+.|+-- +++++ ..+++-+.+.+.|++ .|++ .-.+.
T Consensus 248 iG~~~~~~~~i~~~~~~~~~~~~~~~~~~Q~aa~~al~~~--~~~~~~~~~~~~~rrd~l~~~L~~----~~g~-~~~~P 320 (400)
T PRK06507 248 LGFCGGPKELIKAMSNVNGQATGGIATLAQAAAAAALDGP--QDLLKERAAIYRERRDFVVEKLAE----IPGL-TCHKP 320 (400)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHH----CCCC-CCCCC
T ss_conf 4877487999999999986524765439999999998497--777789999999999999999984----7899-56789
Q ss_pred CEEEEEE-EEC-------------CCHHHHHHH-HHHCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 4009998-724-------------998999999-996898996268----988995589868899999999999999998
Q gi|254780432|r 329 QGLLIGL-KTV-------------FSPALLAAK-FRDECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 329 ~Gl~~~i-e~~-------------~~~~~~~~~-l~~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
.|.|+.. ++. .++..++.+ +.+.||.+.|.. ++.+|++ +..++++|.+++++|.+.+.+
T Consensus 321 ~G~fy~~~~~~~~~~~~~~~~~~~~~d~~f~~~Ll~e~gV~v~PG~~FG~~~~vRis--~a~~~~~l~eal~Rl~~f~~~ 398 (400)
T PRK06507 321 EGAFYIYPNIAGLIGKTSKGGRRLETDEDFVMALLEEQHVATVQGAAYGMSPYFRLS--YATDMESLGEGCARIAQFCED 398 (400)
T ss_pred CEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHH
T ss_conf 814799775401023345345667888999999998589999778744899839999--649999999999999999996
Q ss_pred H
Q ss_conf 5
Q gi|254780432|r 390 L 390 (392)
Q Consensus 390 L 390 (392)
|
T Consensus 399 l 399 (400)
T PRK06507 399 L 399 (400)
T ss_pred C
T ss_conf 4
No 159
>PRK09147 aminotransferase; Provisional
Probab=99.63 E-value=6.9e-14 Score=111.27 Aligned_cols=339 Identities=12% Similarity=0.038 Sum_probs=193.5
Q ss_pred EEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHHHHHHHCC-----CC-CCCCCCC
Q ss_conf 7996799764641022674357878999999999999731450687-578189999986520101-----33-3123565
Q gi|254780432|r 25 WLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNL-YQSTQQEIFANHLIHSTF-----AD-RVFFTNS 97 (392)
Q Consensus 25 ~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~-~~~~~~~~la~~L~~~~~-----~~-~v~f~~S 97 (392)
.+....|+..||+.-| .-.+ --.+.|++|+.+.++...+++.. ...+.++.+++.+.+..+ .+ .+..+++
T Consensus 22 ~~~~~~~~~vI~L~iG--~Pd~-~~P~~v~~a~~~a~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~~v~vt~G 98 (397)
T PRK09147 22 GVTPPADLPPISLSIG--EPKH-PTPAFVRDALAANLDGLAVYPTTAGLPALRQAIARWLERRYGLPAVDPATQVLPVNG 98 (397)
T ss_pred HCHHCCCCCEEECCCC--CCCC-CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
T ss_conf 0401389985876488--8999-978999999999862877899997849999999999998709986785746998888
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 5540356777665432001347860--02343546565432123455321134799986433322210026887541012
Q gi|254780432|r 98 GAESVECAIKTARRYHYMAGKTNKF--RIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISN 175 (392)
Q Consensus 98 GseA~e~Aiklar~~~~~~g~t~r~--~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~ 175 (392)
++||..++++..- .++.. .|+..+-+|......+......+.+ -|..+. .-...|++.+++.+.+
T Consensus 99 a~~al~~~~~a~l-------~~gd~g~~Vl~~~P~Y~~y~~~~~~~G~~~v~----vp~~~e--~~~~~d~~~l~~~i~~ 165 (397)
T PRK09147 99 SREALFAFAQTVI-------DRSDPGPLVVCPNPFYQIYEGAALLAGAEPYF----LNCDPA--NGFAPDFDAVPAEVWA 165 (397)
T ss_pred CHHHHHHHHHHHC-------CCCCCCCEEEECCCCCCCCHHHHHHCCCEEEE----ECCCCC--CCCCCCHHHHHHHHHH
T ss_conf 2899999998605-------88898888996888787749999976986899----235712--2777697898987311
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC--CC----CCCCCC--CCCEE---ECC
Q ss_conf 33222233322221124621012322110223457213101100344445553--10----111245--45302---103
Q gi|254780432|r 176 DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKL--FA----YEWANV--KPDIM---TIA 244 (392)
Q Consensus 176 ~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~--f~----~e~~gi--~PDi~---~~g 244 (392)
++-++++-.=+.-.|. ..+.+-+++|.++|++||+++|.|||...+.-.+.. .+ ....+. .+..+ .+|
T Consensus 166 ~tk~iil~sP~NPTG~-v~s~e~l~~l~~la~~~~i~iisDEiY~~l~~d~~~~p~~~~~~~~~~~~~~~~~~I~~~S~S 244 (397)
T PRK09147 166 RTQLLFVCSPGNPTGA-VLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLS 244 (397)
T ss_pred CCCEEEECCCCCCCCC-CCCHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCEEEECCCC
T ss_conf 2748986899898899-888899999999632472899982686521547987981577777762656568689981572
Q ss_pred CCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEE
Q ss_conf 4444-443443210001112222233223453211110012334554320122210112100002688999988679707
Q gi|254780432|r 245 KGMG-GGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMF 323 (392)
Q Consensus 245 K~l~-gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v 323 (392)
|..+ .|+=+|.+++.+++++.+.......+...++....|+.+.+ .++. ++.+.-+.++++.+.+.+...+.+
T Consensus 245 K~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~A~~aa~---~~~~---~~~~~r~~~~~r~~~~~~~l~~~~ 318 (397)
T PRK09147 245 KRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPQVQLASIAAW---NDEA---HVRENRALYREKFDAVTPILAPVL 318 (397)
T ss_pred CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH---CCCH---HHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 1036766525888689999999999735422257899999999985---6836---799999999999999999873379
Q ss_pred EEECCCE-EEEEEEECC-CHHHHHHHH-HHCCEEEEEC------------CCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 5504640-099987249-989999999-9689899626------------898899558986889999999999999999
Q gi|254780432|r 324 LEVRGQG-LLIGLKTVF-SPALLAAKF-RDECLLTAPS------------SDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 324 ~~vRG~G-l~~~ie~~~-~~~~~~~~l-~~~Gll~~~~------------~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
.-.+-.| +++=+++.. ++..++.++ .+.||.+.|. |.+.|||+ +.-++++|.+++++|++.++
T Consensus 319 ~~~~P~gg~ylw~~~~~~~~~~f~~~Ll~~~gV~v~PGs~F~~~~~g~~~G~g~vRl~--~a~~~e~l~eal~Rl~~~l~ 396 (397)
T PRK09147 319 DVQLPDAGFYLWAKVPGGDDTAFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIA--LVAPLAECVEAAERIVDFLR 396 (397)
T ss_pred CCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHC
T ss_conf 8778897359988689999899999999968999986810042334788899889999--74989999999999999972
No 160
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.62 E-value=6.5e-14 Score=111.43 Aligned_cols=331 Identities=16% Similarity=0.200 Sum_probs=178.6
Q ss_pred HHHCCCCCCHH--------HHHHHHHHHHHCC-------CCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 74357878999--------9999999997314-------50687578189999986520101----33312356555403
Q gi|254780432|r 42 AVNSLGHSHPE--------LVAILKSQSEKLW-------HVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 42 ~~~~lGh~~p~--------i~~a~~~q~~~~~-------~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
.+.+||-+.|. +.+|+.+.++.-. |.++....+.++.+++.+.+..+ .+.++.++++++|.
T Consensus 31 ~vIsl~~G~P~~~p~~~~~~~~a~~~~l~~~~~~~~~~qY~~~~G~~eLReaIA~~~~~~~g~~~~pd~I~vT~Gaqqal 110 (416)
T PRK09440 31 GAIMLGGGNPAHIPEMEDYFRDLLAELLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPENIALTNGSQSAF 110 (416)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHH
T ss_conf 84881796898889822999999999984686665447889998709999999999999848999830099848789999
Q ss_pred HHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCHHHHHHHHHCCCCC
Q ss_conf 56777665432001347--860023435465654321234553211347999864333222---1002688754101233
Q gi|254780432|r 103 ECAIKTARRYHYMAGKT--NKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQA---KFCDLQSLKNQISNDT 177 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t--~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~---~~~d~~~l~~~~~~~i 177 (392)
..++++--. .+.. .+..++...-+|.|-....+ ... ....+.|.......- -..|.+.++ +.+++
T Consensus 111 ~l~~~~l~~----pgd~~~~~~vl~p~~P~Y~~Y~~~~l--~~~--~~~~~~p~i~~~~~~~~~~~~d~~~l~--~~~~t 180 (416)
T PRK09440 111 FYLFNLFAG----RRADGSLKKILLPLAPEYIGYADAGL--EED--LFVSARPNIELLPEGQFKYHVDFEHLD--IDEET 180 (416)
T ss_pred HHHHHHHCC----CCCCCCCCEEEEECCCCCCCHHHHHH--HHC--CCEECCCEEEECCCCCCCCCCCHHHHH--CCCCC
T ss_conf 999999647----67887764389726986544477775--006--500005605766875656788989971--77784
Q ss_pred CCCCCC-CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCCCCCCC
Q ss_conf 222233-3222211246210123221102234572131011003444455531011124545302---103444444344
Q gi|254780432|r 178 AAILIE-PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMGGGFPI 253 (392)
Q Consensus 178 Aavi~E-pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~gG~P~ 253 (392)
.++++- | +.-.|. ..+.+-+++|.++|++||+++|.||+.- .---+..|........+.++ .+||.+.-|+=+
T Consensus 181 ~~ii~~~P-~NPTG~-v~s~e~~~~l~~la~~~~i~iI~De~Y~-~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~pG~Ri 257 (416)
T PRK09440 181 GAICVSRP-TNPTGN-VITDEELAKLDALARQHNIPLIIDNAYG-PPFPGIIFSEATPLWNPNIILCMSLSKLGLPGVRC 257 (416)
T ss_pred EEEEECCC-CCCCCC-CCCHHHHHHHHHHHHHCCEEEEEECCCC-CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCE
T ss_conf 39997789-899887-7889999999999998795899978987-77876331556766789889974511202865425
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH-CCHHHHH---H-HHHHHHCCCEEEEE-C
Q ss_conf 321000111222223322345321111001233455432012221011210-0002688---9-99988679707550-4
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINI-AKILFEG---L-TAIKNRFPNMFLEV-R 327 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~-g~~l~~~---L-~~l~~~~~~~v~~v-R 327 (392)
|-+++.+++++.+.......+...+.++-+++.+.|+ +..+.+...+. -+..+++ + +.+.+..++....+ +
T Consensus 258 G~~vap~~~i~~l~~~~~~~~~~~~~~~Q~~a~~~l~---~~~~~~~~~~~~r~~y~~rr~~~~~~L~~~l~~~~~~~~~ 334 (416)
T PRK09440 258 GIVIANEEIIEALTNMNGIISLAPGRLGPAIAAELIE---SGDLLRLSETVIRPFYRQKVQLAIALLRRALPDLPCLIHK 334 (416)
T ss_pred EEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 8996899999999999976348856999999999997---7968999999999999999999999999857898148857
Q ss_pred CCE-EEEEEEEC---CCHHHHHHHHHHCCEEEEEC-------------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 640-09998724---99899999999689899626-------------89889955898688999999999999999985
Q gi|254780432|r 328 GQG-LLIGLKTV---FSPALLAAKFRDECLLTAPS-------------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 328 G~G-l~~~ie~~---~~~~~~~~~l~~~Gll~~~~-------------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
-.| +++=+.+. .+...+.+.+.++||.+.|. +.+.|||+ +.-++++|++++++|.++++++
T Consensus 335 P~Ggff~wv~~p~~~~~~~~l~~~l~e~gV~vvPG~~F~~g~~~~~~~~~~~lRls--fa~~~e~i~egi~RLa~~i~~~ 412 (416)
T PRK09440 335 PEGAIFLWLWFKDLPITTEELYQRLKARGVLIVPGHYFFPGLDEPWPHTHQCIRMS--YVQDDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEECHHHCCCCCCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHH
T ss_conf 98246999988999989999999999799799826431799987655778869998--2799999999999999999999
No 161
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PMID:11123951), so we use this designation.
Probab=99.61 E-value=7.6e-14 Score=110.97 Aligned_cols=323 Identities=18% Similarity=0.201 Sum_probs=185.1
Q ss_pred EEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH-------HHHHHHC---CCCCCCCCCCCCCCHH
Q ss_conf 46410226743578789999999999997314506875781899999-------8652010---1333123565554035
Q gi|254780432|r 34 FLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFA-------NHLIHST---FADRVFFTNSGAESVE 103 (392)
Q Consensus 34 yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la-------~~L~~~~---~~~~v~f~~SGseA~e 103 (392)
|+|-.+. -.-+|++++++.+.+.+.+. ++...|....+.. +++.+.. +.+.+.|+.++|||+-
T Consensus 2 YLD~aAt------t~~~~~Vi~~~~~~~~~~~~-Np~s~h~~~~~a~~~~e~aR~~ia~~l~a~~~~eIvFTsg~Tea~N 74 (382)
T TIGR03403 2 YLDNNAT------TMLDPKVKELMDPFFCDIYG-NPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNN 74 (382)
T ss_pred CCCCCCC------CCCCHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHH
T ss_conf 4637356------89999999999999986689-9632539999999999999999999759699786999387589999
Q ss_pred HHHHH-HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 67776-65432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 104 CAIKT-ARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 104 ~Aikl-ar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
.+++- ++.+ .. ..+++.||+.. .=|-.-...+ ..-.+.++.-..-+++....-|++.+++.+.+++..|.+
T Consensus 75 ~~~~gl~~~~--~~-~~~~~~ii~s~-~EH~sv~~~~----~~l~~~G~~v~~~~~d~~G~~d~~~l~~~l~~~T~LVai 146 (382)
T TIGR03403 75 WVLKGVYFDE--IL-KGGKNHIITTE-VEHPAVRATC----AFLESLGVEVTYLPINEQGTITAEQVREAITEKTALVSV 146 (382)
T ss_pred HHHHHHHHHH--HH-CCCCCEEEEEC-CCCHHHHHHH----HHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEE
T ss_conf 9999999998--63-68999999955-6515389999----999965978999775999858899999760146606776
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCC-CCCCCCCC
Q ss_conf 33222211246210123221102234572131011003444455531011124545302103--4444443-44321000
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA--KGMGGGF-PIGACLAT 259 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g--K~l~gG~-P~sav~~~ 259 (392)
--+.++-|.+.| ++.+.++|+++|+++++|=+|+ +|+. .+-.+.+ ..|+++++ | +. |- =+|++..+
T Consensus 147 ~~anN~tG~i~p----v~~I~~~~~~~g~~~~vDa~Q~-~g~~--pidv~~l--~~D~l~~S~HK-~~-GP~GiG~L~ir 215 (382)
T TIGR03403 147 MWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI--PVDVQKA--GVDFLSFSAHK-FH-GPKGVGGLYIR 215 (382)
T ss_pred ECCCCCCCCCCC----HHHHHHHHHHCCCEEEEEHHHH-CCCC--CCCCCCC--CCCEEEEEHHH-CC-CCCCEEEEEEC
T ss_conf 314767777787----9999999987298799671341-3564--6432323--46524531010-36-88834999986
Q ss_pred CCCCCCCCCCCC---------CCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEE--EE-
Q ss_conf 111222223322---------34532111100123345543201--22210112100002688999988679707--55-
Q gi|254780432|r 260 NEVAACMNQGSH---------GSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMF--LE- 325 (392)
Q Consensus 260 ~~i~~~~~~~~~---------~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v--~~- 325 (392)
+++ .+.|..+ ++|. |..++++..+++++..+ +...++++++.++|.++|+++ |++. .+
T Consensus 216 ~~~--~l~P~~~Gg~~~~~~r~GT~--n~~~i~~l~~A~~~~~~~~~~~~~~~~~L~~~l~~~L~~i----~~~~i~g~~ 287 (382)
T TIGR03403 216 KGV--ELTPLFHGGEHMGGRRSGTL--NVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLEL----PDVFVVGDR 287 (382)
T ss_pred CCC--CCCCCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCEEECCH
T ss_conf 777--65876589877476127986--7889999999999999989999999999999999999817----794671683
Q ss_pred -ECCC-EEEEEEEECCCHHHHHHHHHHCCEEEEEC-----------------------CCCEEEECCCCCCCHHHHHHHH
Q ss_conf -0464-00999872499899999999689899626-----------------------8988995589868899999999
Q gi|254780432|r 326 -VRGQ-GLLIGLKTVFSPALLAAKFRDECLLTAPS-----------------------SDNVVRILPPLTITAEEIHEGL 380 (392)
Q Consensus 326 -vRG~-Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~-----------------------~~~~irl~Ppl~it~~eid~~i 380 (392)
-|-- -+.+.++. .++..+...|-++|+.+... ....||++....-|++|||+++
T Consensus 288 ~~r~p~~~~~~~~~-i~~~~~~~~L~~~gI~v~~GsaCas~~~~~s~vl~a~g~~~~~~~~~vR~S~~~ynT~eeId~~i 366 (382)
T TIGR03403 288 EHRVPNTILISIKG-VEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTI 366 (382)
T ss_pred HHCCCCEEEEECCC-CCHHHHHHHHCCCCEEEECHHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHH
T ss_conf 32588579862799-89899999847099799755772899887589999719985445957999758999999999999
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999999852
Q gi|254780432|r 381 ERIERTAIKLS 391 (392)
Q Consensus 381 ~~l~~al~~L~ 391 (392)
+.|.+++.+|-
T Consensus 367 ~~l~~~v~~lr 377 (382)
T TIGR03403 367 EVFKKAVQRLR 377 (382)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999998
No 162
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.61 E-value=6.9e-14 Score=111.25 Aligned_cols=315 Identities=18% Similarity=0.216 Sum_probs=179.6
Q ss_pred CHHHHHHHHHHHHH---CCCCCCCCCCHHHHHHHHHHHHHC----CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999973---145068757818999998652010----13331235655540356777665432001347860
Q gi|254780432|r 50 HPELVAILKSQSEK---LWHVSNLYQSTQQEIFANHLIHST----FADRVFFTNSGAESVECAIKTARRYHYMAGKTNKF 122 (392)
Q Consensus 50 ~p~i~~a~~~q~~~---~~~~~~~~~~~~~~~la~~L~~~~----~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~ 122 (392)
.|.+.+++.+.... ..+.......+.+..+++.+.... ..+.+.+++++++|...+++..- .+| .
T Consensus 13 ~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-------~~g-d 84 (350)
T cd00609 13 PPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL-------NPG-D 84 (350)
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHHHHHHC-------CCC-C
T ss_conf 99999999999747467587999881999999999987873899747978992699999999999980-------898-9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 02343546565432123455321134799986433322210026887541012332222333222211246210123221
Q gi|254780432|r 123 RIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQL 202 (392)
Q Consensus 123 ~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l 202 (392)
+|+...-+|.+....+... |.... .-|..+ +.....+.+.++....+++.++++-+-+.--|. ..+.+-+++|
T Consensus 85 ~vlv~~P~y~~~~~~~~~~-g~~~~---~v~~~~--~~~~~~~~~~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l 157 (350)
T cd00609 85 EVLVPDPTYPGYEAAARLA-GAEVV---PVPLDE--EGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGA-VLSEEELEEL 157 (350)
T ss_pred EEEEECCCCCHHHHHHHHC-CCCCC---CCCCCC--CCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCC-CCCHHHHHHH
T ss_conf 8999479863069999982-99412---556560--038676689999856889978985699497254-6337889899
Q ss_pred HCCCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCCCCC--E--EECCCCCC-CCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 10223457213101100344445553101-11245453--0--21034444-4434432100011-12222233223453
Q gi|254780432|r 203 RKICDDIDALLIFDEVQTGYGRTGKLFAY-EWANVKPD--I--MTIAKGMG-GGFPIGACLATNE-VAACMNQGSHGSTY 275 (392)
Q Consensus 203 ~~lc~~~g~llI~DEV~tG~GRtG~~f~~-e~~gi~PD--i--~~~gK~l~-gG~P~sav~~~~~-i~~~~~~~~~~~T~ 275 (392)
.++|++||+++|.||+...|.-.+..... ...+ .+| | -.+||.++ .|+-+|.+++.++ +.+.+.........
T Consensus 158 ~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
T cd00609 158 AELAKKHGILIISDEAYAELVYDGEPPPALALLD-AYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTS 236 (350)
T ss_pred HHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHCC-CCCEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCC
T ss_conf 9998623862688534122036998889678557-798089991172303794537799998889999999862421467
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEEC-CCEEEEEEEECC--CHHHHHHHHHHCC
Q ss_conf 2111100123345543201222101121000026889999886797075504-640099987249--9899999999689
Q gi|254780432|r 276 GGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVR-GQGLLIGLKTVF--SPALLAAKFRDEC 352 (392)
Q Consensus 276 ~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vR-G~Gl~~~ie~~~--~~~~~~~~l~~~G 352 (392)
..++++..++.+.++-- ++.+++.++.-+.-++.+.+...+++... .+. ..|.++-+++.. +...+.+.+.++|
T Consensus 237 ~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p~~g~f~~~~~~~~~~~~~~~~~l~~~g 313 (350)
T cd00609 237 GPSTLSQAAAAAALDDG--EEHLEELRERYRRRRDALLEALKELGPLV-VVKPSGGFFLWLDLPEGDDEEFLERLLLEAG 313 (350)
T ss_pred CCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCE-EECCCCCEEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 89879999999998682--99999999999999999999998579961-2079955399898999982999999999799
Q ss_pred EEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 899626------898899558986889999999999999
Q gi|254780432|r 353 LLTAPS------SDNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 353 ll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
+++.+. +++.+|+. +..+++++++++++|.+
T Consensus 314 v~v~~g~~f~~~~~~~iRl~--~~~~~~~~~~~~~rl~~ 350 (350)
T cd00609 314 VVVRPGSAFGEGGEGFVRLS--FATPEEELEEALERLAE 350 (350)
T ss_pred EEEEECHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHCC
T ss_conf 99992456488998979999--63989999999998578
No 163
>PRK09082 putative aminotransferase; Validated
Probab=99.61 E-value=4.2e-14 Score=112.64 Aligned_cols=325 Identities=16% Similarity=0.157 Sum_probs=189.4
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHHHHHHCC----CC-CCCCCCCCCCCHHH
Q ss_conf 7646410226743578789999999999997314--50687578189999986520101----33-31235655540356
Q gi|254780432|r 32 IPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW--HVSNLYQSTQQEIFANHLIHSTF----AD-RVFFTNSGAESVEC 104 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~--~~~~~~~~~~~~~la~~L~~~~~----~~-~v~f~~SGseA~e~ 104 (392)
+..||+.-| .-.+ .-+|.|++|++++++... |+......+.+..+|+++.+..+ .+ .++.++++++|...
T Consensus 30 ~~~I~L~~G--~Pd~-~~P~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaiA~~~~~~~g~~~~p~~eI~vT~Ga~~al~~ 106 (386)
T PRK09082 30 HGAINLSQG--FPDF-DGPPRLVEALAYAMAAGHNQYPPMTGVAALREAIADKTARLYGRRYDADSEITVTAGATEALFA 106 (386)
T ss_pred CCCEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHH
T ss_conf 998872798--9999-8789999999999965999898987719999999999999968998988838987788999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 77766543200134786002343546565432123455321134799986433322210026887541012332222333
Q gi|254780432|r 105 AIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEP 184 (392)
Q Consensus 105 Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Ep 184 (392)
+++..- .+| +.||..+-+|.+.........+.+..- |..++ . .-.|++.+++.+.+++-++++-.
T Consensus 107 ~~~al~-------~pG-D~Vlv~~P~Y~~y~~~~~~~G~~~v~v----pl~~~--~-~~~d~~~l~~~i~~~tk~iil~s 171 (386)
T PRK09082 107 AILALV-------RPG-DEVIVFDPSYDSYAPAIELAGGRAVRV----ALQPP--D-FRVDWQRFAAAITPRTRLIILNT 171 (386)
T ss_pred HHHHHC-------CCC-CEEEEECCCCHHHHHHHHHCCCEEEEE----CCCCC--C-CCCCHHHHHHHCCCCCEEEEECC
T ss_conf 999975-------999-989992686287999999849989992----67798--8-88799999963675764999799
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC--CCCCCCCC---EEECCCCCC-CCCCCCCCCC
Q ss_conf 22221124621012322110223457213101100344445553101--11245453---021034444-4434432100
Q gi|254780432|r 185 IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY--EWANVKPD---IMTIAKGMG-GGFPIGACLA 258 (392)
Q Consensus 185 v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~--e~~gi~PD---i~~~gK~l~-gG~P~sav~~ 258 (392)
=+.-.|. ..+++-+++|.++|++||+++|.||+...+.-.|+.+.+ ...+...- +-.+||.++ .|+=+|.+++
T Consensus 172 P~NPTG~-v~s~~~l~~l~~la~~~~i~ii~DE~Y~~l~~d~~~~~s~~~~~~~~~~~i~i~S~SK~~~~~G~RiG~~v~ 250 (386)
T PRK09082 172 PHNPSGT-VWSAADMDALAQLIAGTDILVLSDEVYEHIVFDGQGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVA 250 (386)
T ss_pred CCCCCCC-CCCHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 9697360-136355999999999819479711222331138988868444865334544432444245787510599987
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC----HHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEE-E
Q ss_conf 01112222233223453211110012334554320122210----112100002688999988679707550464009-9
Q gi|254780432|r 259 TNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLE----NVINIAKILFEGLTAIKNRFPNMFLEVRGQGLL-I 333 (392)
Q Consensus 259 ~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~----~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~-~ 333 (392)
.+++.+.+.......++..+...-.++.+.|+.- ++.++ ..+++-+.+.+.|++ . . +.-+...|.+ +
T Consensus 251 p~~l~~~~~~~~~~~~~~~~~~~Q~a~a~~l~~~--~~~~~~~~~~y~~rrd~l~~~L~~----~-~-~~~~~~~G~~f~ 322 (386)
T PRK09082 251 PAALSAEFRKVHQYNTFTVNTPAQLALADYLRAE--PEHYLELPAFYQAKRDRFRAALAN----S-R-FKLLPCEGTYFQ 322 (386)
T ss_pred CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHH----C-C-CEEECCCCEEEE
T ss_conf 8999999999998645787689999999999669--589999999999999999999986----7-9-888479925999
Q ss_pred EEEEC----CCHHHHHHH-HHHCCEEEEEC--------CCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 98724----998999999-99689899626--------898899558986889999999999999
Q gi|254780432|r 334 GLKTV----FSPALLAAK-FRDECLLTAPS--------SDNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 334 ~ie~~----~~~~~~~~~-l~~~Gll~~~~--------~~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
-+++. .++..++++ +.+.||.+.|. +.+.|||+ |..++++|++++++|.+
T Consensus 323 ~~~~~~~~~~~~~~f~~~l~~e~gV~v~PG~~F~~~~~~~~~iRl~--fa~~~e~l~ea~~RLak 385 (386)
T PRK09082 323 LVDYSAISDLNDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRFC--FAKQEETLDAAAERLCQ 385 (386)
T ss_pred EEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHH
T ss_conf 8860348998999999999985899998271105799999979999--68999999999999842
No 164
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.59 E-value=1.5e-14 Score=115.63 Aligned_cols=305 Identities=17% Similarity=0.206 Sum_probs=172.8
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 57878999999999999731450687578-18999998652010133312356555403567776654320013478600
Q gi|254780432|r 45 SLGHSHPELVAILKSQSEKLWHVSNLYQS-TQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFR 123 (392)
Q Consensus 45 ~lGh~~p~i~~a~~~q~~~~~~~~~~~~~-~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ 123 (392)
+.-.-||+|.+||.++- ... ..|.. +...+|.+++.+..+.+.++|+.|||.||-.||+..-+ ++..
T Consensus 6 t~t~p~p~m~~A~~~A~--~gd--~~yg~D~~~~~le~~~a~l~g~eaa~f~~sGT~aN~~al~~~~~-------~~~~- 73 (338)
T cd06502 6 TVTGPTPEMLEAMAAAN--VGD--DVYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQ-------PGGS- 73 (338)
T ss_pred CCCCCCHHHHHHHHCCC--CCC--CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCC-------CCCE-
T ss_conf 18889999999998063--678--66678989999999999984898299807841899999998569-------9975-
Q ss_pred CCCCCCCCCCCC--CCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC-------CCCCCCCCCCCCCCCCCCC
Q ss_conf 234354656543--21234-5532113479998643332221002688754101-------2332222333222211246
Q gi|254780432|r 124 IVTFEGAFHGRT--LATIS-AGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQIS-------NDTAAILIEPIQGEGGVRK 193 (392)
Q Consensus 124 ii~~~~~yHG~t--~~a~s-~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~-------~~iAavi~Epv~g~~G~~~ 193 (392)
||+-+ ..|=.. .++.+ ++|..- .+....... -+.+.+++.+. ..+..|-+|-....|+ .
T Consensus 74 vi~~~-~aHi~~~E~g~~~~~~G~~~-----~~~~~~~g~---l~~~~i~~~i~~~~~~h~~~~~lv~ient~e~G~--v 142 (338)
T cd06502 74 VICHE-TAHIYTDEAGAPEFLSGVKL-----LPVPGENGK---LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGT--V 142 (338)
T ss_pred EEEEC-CCCEEEECCCCHHHHCCCEE-----EEEECCCCC---CCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCE--E
T ss_conf 88504-67145653773998749625-----643389997---3899999963156886466520799873128963--1
Q ss_pred CCHHHHHHHHCCCCCCCCEEEECCCC--CCCCCCCCCCCCCCCCCCCCEE--ECCCCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf 21012322110223457213101100--3444455531011124545302--10344444434432100-0111222223
Q gi|254780432|r 194 VPEEFLQQLRKICDDIDALLIFDEVQ--TGYGRTGKLFAYEWANVKPDIM--TIAKGMGGGFPIGACLA-TNEVAACMNQ 268 (392)
Q Consensus 194 ~~~~~l~~l~~lc~~~g~llI~DEV~--tG~GRtG~~f~~e~~gi~PDi~--~~gK~l~gG~P~sav~~-~~~i~~~~~~ 268 (392)
+|.+.++.|+++|++||+.+-+|--. -...-+|. ....+.---|.+ |++|+++ .|+++|+. ++++.+.+..
T Consensus 143 ~~~~el~~i~~~a~~~gl~lH~DGARl~nA~~a~g~--~~~~~~~~~Dsvs~~~sKglg--ap~gavl~g~~~~i~~a~~ 218 (338)
T cd06502 143 YPLDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGG--APVGAVVVGNRDFIARARR 218 (338)
T ss_pred CCHHHHHHHHHHHHHCCCEEEECCCCEECEEECCCC--CHHHHHHHCCEEEEECCCCCC--CCCCEEEECCHHHHHHHHH
T ss_conf 279999999999997497266536530044541599--989986418789996656677--7432478778899999999
Q ss_pred C--CCCCCCCCCCCCHHHHHHHHHHHHCCC---CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH--
Q ss_conf 3--223453211110012334554320122---210112100002688999988679707550464009998724998--
Q gi|254780432|r 269 G--SHGSTYGGNVLAMVLGEKVLNIIQSDG---FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP-- 341 (392)
Q Consensus 269 ~--~~~~T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~-- 341 (392)
. ..|+-++-.-+-.|++++.| +.+. ..++...+.++|.++|+++.. .+..+. ..+.+ +.....+
T Consensus 219 ~rK~~Gg~mrq~g~lAAa~~~~L---~~~~~~~~l~~dh~~A~~La~~l~~~~~----~~~~~e-tniv~-~~~~~~n~~ 289 (338)
T cd06502 219 RRKQAGGGMRQSGFLAAAGLAAL---ENDLWLRRLRHDHEMARRLAEALEELGG----LESEVQ-TNIVL-LDPVEANAV 289 (338)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHH---HCCHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCCC-CCEEE-EECCCCCHH
T ss_conf 99864753645999999999998---5483789999999999999999986799----766665-77589-832754188
Q ss_pred ----HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf ----99999999689899626898899558986889999999999999
Q gi|254780432|r 342 ----ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 342 ----~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
......++++|+.+.+.+++.+||..++-+|++++|++++.|++
T Consensus 290 ~~~~~~~~~~~~~~g~~~~~~~~~~vR~Vt~~~~t~~dvd~~i~~ik~ 337 (338)
T cd06502 290 FVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 987469999999689699946999289998899999999999999962
No 165
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.59 E-value=1.7e-13 Score=108.76 Aligned_cols=324 Identities=18% Similarity=0.219 Sum_probs=188.5
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHH
Q ss_conf 799764641022674357878999999999999731450687578189999986520101--333123565554035677
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAI 106 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Ai 106 (392)
.+.+++|||.++ .+.+|-. |.+++|+.+.++.+.. |..+...+|-+.|.+..+ .+.+..+|+.+|+....+
T Consensus 16 ~~~~~iidls~N--eNP~g~p-~~v~~a~~~~~~~l~~----YPd~~~~~Lr~aiA~~~gv~~~~I~~gnGs~e~i~~~~ 88 (354)
T PRK06358 16 LTKNMILDFSAN--INPLGVP-ESVKDAITENLDKLVE----YPDIDYLELRKRIASFEQLDLENVILGNGAAEVIFNIV 88 (354)
T ss_pred CCCCCEEECCCC--CCCCCCC-HHHHHHHHHHHHHHCC----CCCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHH
T ss_conf 694648886499--9898889-9999999998766101----89997799999999987838799998687899999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC-CCCCCCCC
Q ss_conf 76654320013478600234354656543212345532113479998643332221002688754101233-22223332
Q gi|254780432|r 107 KTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDT-AAILIEPI 185 (392)
Q Consensus 107 klar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~i-Aavi~Epv 185 (392)
+. + .++ +++....+|--....+........+ -|........ .|.+.++ .+.+++ ..+|.-|=
T Consensus 89 ~~---~------~~~-~v~i~~Ptf~~Y~~~~~~~g~~v~~----~~l~~~~~~~--~~~~~l~-~~~~~~~~v~l~nPn 151 (354)
T PRK06358 89 RV---L------KPK-KVLILAPTFSEYERALKSVDAEVIY----YELKEETNFA--INEDVLE-KITEEIDLIFLCNPN 151 (354)
T ss_pred HH---C------CCC-EEEEECCCHHHHHHHHHHCCCEEEE----EECCCCCCCC--CCHHHHH-HCCCCCCEEEEECCC
T ss_conf 86---1------899-6999798879999999984986789----9777003888--7999997-445577789996899
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCCCCCEE---ECCCCCC-CCCCCCCCCCCC
Q ss_conf 2221124621012322110223457213101100344445553101-1124545302---1034444-443443210001
Q gi|254780432|r 186 QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY-EWANVKPDIM---TIAKGMG-GGFPIGACLATN 260 (392)
Q Consensus 186 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~-e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~ 260 (392)
.= -|. ..+.+.++.+.+.|+++++++|+||...-|..-+..... +..+--|.++ +|||..| .|+-+|..++.+
T Consensus 152 NP-TG~-~~~~~~l~~l~~~~~~~~~~vviDEaY~ef~~~~~~~s~~~~~~~~~nlivlrSfSK~~glaGlRiGy~i~~~ 229 (354)
T PRK06358 152 NP-TGQ-LISKEELKKILEKCEKKNIYVIIDEAFMDFVEENETISMIKYLENFKNLIIIRAFTKFFAIPGLRLGYGLCSN 229 (354)
T ss_pred CC-CCC-CCCHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCHHHHHHHCCCEEEEEECCHHHCCCCHHEEEEEECC
T ss_conf 98-664-0679999999987201787999964056763688766678887523766899725166367662115654287
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECC
Q ss_conf -1122222332234532111100123345543201222101121000026889999886797075504640099987249
Q gi|254780432|r 261 -EVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVF 339 (392)
Q Consensus 261 -~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~ 339 (392)
.+.+.+.... ..|.-|.++.+|+.++|+- .+.+++..+.-..-++.|.+...+.+++ .-....+-++-++..
T Consensus 230 ~~i~~~l~~~~--~p~~vn~~a~~aa~aal~d---~~~~~~~~~~~~~~R~~l~~~L~~l~g~-~v~ps~anFvl~~~~- 302 (354)
T PRK06358 230 KNLIEKLNQMR--EPWSINTFADLAGRVLLED---KNYIKKTIQWIKKEKEFLYNGLSEFKGL-TVYEPSVNFIFFKLN- 302 (354)
T ss_pred HHHHHHHHHCC--CCCCHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHHHHCCCCC-EECCCCCEEEEEEEC-
T ss_conf 99999998458--9988269999999999529---9999999999999999999998749996-888998489999839-
Q ss_pred CHHHHHHHHHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9899999999689899626------898899558986889999999999999999
Q gi|254780432|r 340 SPALLAAKFRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 340 ~~~~~~~~l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
++..+.+.|+++|+++++. +++.+|++ +=|.+|.+++++.|++.|.
T Consensus 303 ~~~~~~~~L~~~gIlVr~~~~f~~l~~~~iRis---vgt~~en~~ll~aL~~iL~ 354 (354)
T PRK06358 303 KPIDLRKELLLKGILIRSCSNYRGLDENYYRVA---VKSREDNKKLLEALSVILS 354 (354)
T ss_pred CHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEE---ECCHHHHHHHHHHHHHHHC
T ss_conf 879999999859919997887788899979996---2899999999999999749
No 166
>PRK04152 consensus
Probab=99.59 E-value=1.6e-13 Score=108.79 Aligned_cols=321 Identities=16% Similarity=0.213 Sum_probs=192.3
Q ss_pred ECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHH
Q ss_conf 6799764641022674357878999999999999731450687578189999986520101--33312356555403567
Q gi|254780432|r 28 SENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECA 105 (392)
Q Consensus 28 d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~A 105 (392)
-.+.+++|||.++ -+.+|-. |.+.+|+++++..+. .|..+...+|.+.+.+..+ .+.+..+|+.+|+....
T Consensus 27 g~~p~~ii~ls~N--eNP~g~p-~~~~~ai~~~~~~~~----~YPd~~~~~Lr~~iA~~~gv~~~~I~vgnGs~e~i~~~ 99 (364)
T PRK04152 27 GIDPKDVIKLASN--ENPFGTS-PKVIEAIRKNASKAH----LYPDDSMFELKSALASKFDVESENIIIGAGSDQVIEFA 99 (364)
T ss_pred CCCCCCEEEECCC--CCCCCCC-HHHHHHHHHHHHHCC----CCCCCCHHHHHHHHHHHHCCCHHEEEECCCHHHHHHHH
T ss_conf 9681247881799--9999999-999999998787376----79996799999999998695830099856999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC-CCCCC-CCCCC
Q ss_conf 77665432001347860023435465654321234553211347999864333222100268875410-12332-22233
Q gi|254780432|r 106 IKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQI-SNDTA-AILIE 183 (392)
Q Consensus 106 iklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~-~~~iA-avi~E 183 (392)
++..- .+| ..|+....+|-.-...+. ..|-.... .+.. ..|++.+.+.. ..+.- .+|.-
T Consensus 100 ~~~~~-------~~g-~~vl~~~Ptf~~Y~~~a~-~~g~~v~~------~~~~----~~dl~~~~~~~~~~~~~lv~l~n 160 (364)
T PRK04152 100 IHAKL-------NEK-SSVLMAGVTFAMYEIYAK-QCGAKIYK------TQSV----EHDLNEFLELYKSHKPKIIFLCL 160 (364)
T ss_pred HHHHH-------CCC-CEEEECCCCHHHHHHHHH-HCCCEEEE------CCCC----CCCHHHHHHHHHCCCCCEEEECC
T ss_conf 99983-------899-844658987268999999-83987996------6874----33989999986377985899879
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC---CCCC-CCCCCCCCCEE---ECCCCCC-CCCCCCC
Q ss_conf 3222211246210123221102234572131011003444455---5310-11124545302---1034444-4434432
Q gi|254780432|r 184 PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG---KLFA-YEWANVKPDIM---TIAKGMG-GGFPIGA 255 (392)
Q Consensus 184 pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG---~~f~-~e~~gi~PDi~---~~gK~l~-gG~P~sa 255 (392)
|=-= .|.. .+++-+..+.+.|.+ ++++|+||...-|.... .... .+..+--|.++ +|+|..| .|+-+|.
T Consensus 161 PNNP-TG~~-~~~~~l~~~~~~~~~-~~~vvvDEAY~ef~~~~~~~~~~~~~~l~~~~~nlivlrsfSK~~glaGlRlGy 237 (364)
T PRK04152 161 PNNP-LGEC-LDASEVYKFIKGIDE-DTLVVIDAAYMEFAKFKDSKKHIEPKELIKLFPNVIYLGTFSKAYGLGGMRVGY 237 (364)
T ss_pred CCCC-CCCC-CCCCCHHHHHHHCCC-CCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCHHHCCCCCCCCCC
T ss_conf 9998-6724-665124999975455-776874167788860377534558899874279789983260523787773520
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEE
Q ss_conf 10001112222233223453211110012334554320122210112100002688999988679707550464009998
Q gi|254780432|r 256 CLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGL 335 (392)
Q Consensus 256 v~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~i 335 (392)
+++.+++.+.+.... .+|+-|.++.+||.++|+ +++++++..+.-..-++++.++.... ++ .-....+-++-+
T Consensus 238 ~ia~~~~i~~l~k~~--~p~~vn~~a~~aa~~aL~---~~~~~~~~~~~~~~er~~~~~~~~~~-g~-~~~ps~aNFil~ 310 (364)
T PRK04152 238 GIANAEIISALYKLR--PPFNVTTLSLKAAIEALK---DEEFVEKTLENNFKEMKRYEEFAKEQ-GI-EFIDSYTNFITF 310 (364)
T ss_pred CCCCHHHHHHHHHHC--CCCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CC-EECCCCCCEEEE
T ss_conf 138999999999853--898867999999999937---99999999999999999999998858-88-489998878989
Q ss_pred EE--CCCHHHHHHHHHHCCEEEEEC---CCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 72--499899999999689899626---89889955898688999999999999999
Q gi|254780432|r 336 KT--VFSPALLAAKFRDECLLTAPS---SDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 336 e~--~~~~~~~~~~l~~~Gll~~~~---~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
.+ ..+...+.+.|+++|++++.+ +.+.+|++ +=|.+|-++++++|+++|
T Consensus 311 ~~~~~~~a~~l~~~L~~~gI~VR~~~~~g~~~iRIs---vg~~een~~li~aL~~vL 364 (364)
T PRK04152 311 FFDERKNSTEISQKLLKKGIIVRNLKSYGLNAIRIT---IGTPEQNDRVFEELDKEL 364 (364)
T ss_pred ECCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEE---CCCHHHHHHHHHHHHHHC
T ss_conf 899999999999999968919985798996979997---399999999999999759
No 167
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.58 E-value=2.1e-13 Score=108.05 Aligned_cols=332 Identities=16% Similarity=0.212 Sum_probs=188.8
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCCCC-CCCHHHHHHHHHHHHHCC-----CCCCCCCCCCCCCH
Q ss_conf 99764641022674357878999999999999731-450687-578189999986520101-----33312356555403
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVSNL-YQSTQQEIFANHLIHSTF-----ADRVFFTNSGAESV 102 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~~~-~~~~~~~~la~~L~~~~~-----~~~v~f~~SGseA~ 102 (392)
++...|++.-|. ..+ -..|+|++|+++.++.. .+++.. ...+.+..+++.+.+..+ .+.++.+++.++|.
T Consensus 28 ~~~dvI~l~ig~--pdf-~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~p~~~I~it~G~~~al 104 (390)
T PRK07309 28 DIPGILKLTLGE--PDF-TTPEHVKEAAKAAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEAL 104 (390)
T ss_pred CCCCEEECCCCC--CCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHH
T ss_conf 899908998978--999-98899999999998479999979977499999999999998589999888799888989999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC---CCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410---123322
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQI---SNDTAA 179 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~---~~~iAa 179 (392)
..+++.-- .+| ..|+..+-.|++..........+... . |...+ .. .-|.+.+++.+ .+++-+
T Consensus 105 ~~~~~~l~-------~pG-D~Vli~~P~Y~~~~~~~~~~g~~~v~---v-~~~~~--~~-~~~~~~le~~~~~~~~k~k~ 169 (390)
T PRK07309 105 SASLTAIL-------EPG-DKVLLPAPAYPGYEPIVNLVGAEIVE---I-DTTEN--DF-VLTPEMLEKAILEQGDKLKA 169 (390)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCHHHHHHHHHCCCEEEE---E-CCCCC--CC-CCCHHHHHHHHHHCCCCEEE
T ss_conf 99999966-------998-98998378744199999984988999---4-46201--15-78999999998748887499
Q ss_pred CCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE----EECCCCCC-CCCCC
Q ss_conf 223-3322221124621012322110223457213101100344445553101112454530----21034444-44344
Q gi|254780432|r 180 ILI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDI----MTIAKGMG-GGFPI 253 (392)
Q Consensus 180 vi~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi----~~~gK~l~-gG~P~ 253 (392)
+|+ -| +.-.| ...+.+-++++.++|++||+++|.|||..-+--.|.-+.+- ....||- ..+||..+ .|+-+
T Consensus 170 lil~~P-~NPtG-~v~s~e~l~~i~~la~~~~v~iisDEiY~~l~~~~~~~~s~-~~~~~d~~i~~~s~SK~~~~~G~Ri 246 (390)
T PRK07309 170 VILNYP-ANPTG-VTYSREQIKALAEVLKKYDIFVISDEVYSELTYTGQSHVSI-AEYLPDQTILINGLSKSHAMTGWRI 246 (390)
T ss_pred EEECCC-CCCCC-CCCCHHHHHHHHHHHHHCCEEEEEECCCHHCCCCCCCCCCH-HHHCCCCEEEEECCCHHHHCCCCCE
T ss_conf 997899-89988-87899999999999976898999505511101489886448-7755576799960605654046635
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC--CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE-
Q ss_conf 321000111222223322345321111001233455432012--22101121000026889999886797075504640-
Q gi|254780432|r 254 GACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSD--GFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG- 330 (392)
Q Consensus 254 sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~--~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G- 330 (392)
|.+++.+++++.+.......+.+.+.++..++.+.|+.-.++ .+.++..+.-+.+.+.|.++. + .+ ++-.|
T Consensus 247 G~i~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~y~~rr~~l~~~l~~~~--~-~~---~~P~gg 320 (390)
T PRK07309 247 GLIFAPAELTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTALG--F-KI---IKPDGA 320 (390)
T ss_pred EEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC--C-CC---CCCCEE
T ss_conf 89974999999999998653057874999999999974827899999999999999999998627--8-63---389800
Q ss_pred EEEEEEEC----CCHHHHHHH-HHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 09998724----998999999-99689899626------89889955898688999999999999999985
Q gi|254780432|r 331 LLIGLKTV----FSPALLAAK-FRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 331 l~~~ie~~----~~~~~~~~~-l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+++=+++. .+...++.. +.+.||.+.|. +++.+|+. +..++++|++++++|.+++.|=
T Consensus 321 ~ylw~~lp~~~~~d~~~~~~~l~~~~gV~v~PG~~Fg~~g~g~iRl~--~a~~~e~l~eal~Rl~~~l~e~ 389 (390)
T PRK07309 321 FYIFAKIPAGYNQDSFKFLQDFAKEKAVAIIPGVAFGPYGEGYVRLS--YAASMETIKEAMKRLKEYMEEH 389 (390)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
T ss_conf 69807457899989999999999969999977732288999879999--8289999999999999999971
No 168
>PRK08363 alanine aminotransferase; Validated
Probab=99.58 E-value=6.5e-13 Score=104.91 Aligned_cols=335 Identities=15% Similarity=0.141 Sum_probs=187.2
Q ss_pred CCCCEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCC-CCCC-CCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCC
Q ss_conf 79976464102267435787-89999999999997314-5068-7578189999986520101----3331235655540
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLW-HVSN-LYQSTQQEIFANHLIHSTF----ADRVFFTNSGAES 101 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~-~~~~-~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA 101 (392)
..|++.||+.-|-- +.... -.+.|++|+.++++... +++. ....+.+..+++.+.+..+ .|.++.++++++|
T Consensus 27 ~~G~~vi~l~iG~P-~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~pd~I~vt~G~~~a 105 (398)
T PRK08363 27 KKGIKVIRLNIGDP-VKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTNAVTEA 105 (398)
T ss_pred HCCCCEEECCCCCC-CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHH
T ss_conf 77997068569899-97899989999999999997189988998875999999999999986899866888985778999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 35677766543200134786002343546565432123455321134799986433322210026887541012332222
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
...+++.-- .+| ..|+..+-+|..-........+.+.. + +..+ ..-...|++++++.+.+++-+++
T Consensus 106 l~~~~~~l~-------~pG-D~Vlvp~P~Y~~y~~~~~~~g~~~v~---~-~~~~--~~~~~~d~~~l~~~i~~~tk~i~ 171 (398)
T PRK08363 106 LQMLFGALL-------DPG-DEILIPGPSYPPYTGLVKFYGGVPVE---Y-RTIE--EEGWQPDIDDIRKKITEKTKAIA 171 (398)
T ss_pred HHHHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHCCCEEEC---C-CCCC--CCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 999999966-------998-98998667567438999983997843---6-8862--14896899999975311372999
Q ss_pred C-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCC-CCCCCCEE--ECCCCCC-CCCCCCCC
Q ss_conf 3-332222112462101232211022345721310110034444555310111-24545302--1034444-44344321
Q gi|254780432|r 182 I-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEW-ANVKPDIM--TIAKGMG-GGFPIGAC 256 (392)
Q Consensus 182 ~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~-~gi~PDi~--~~gK~l~-gG~P~sav 256 (392)
+ -| ..--|. ..+++.++++.++|++||+++|.||+...+---|++..... .+-.+=|+ .+||..+ .|+=+|-+
T Consensus 172 l~nP-~NPTG~-v~s~~~l~~i~~la~~~~~~vIsDEiY~~l~~~~~~~s~~~~~~~~~vi~i~s~SK~~~~~G~RiG~i 249 (398)
T PRK08363 172 VINP-NNPTGA-LYDKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYI 249 (398)
T ss_pred ECCC-CCCCCC-CCCHHHHHHHHHHHHHCCCEEECHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCEEEE
T ss_conf 8799-998888-65488999999998755964761334666416998779778286778899825503047856136999
Q ss_pred CC--CCCCCCCCCCC--CCCCC-CCCCCCCHHHHHHHHHHHHCCCCC----CHHHHHCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 00--01112222233--22345-321111001233455432012221----01121000026889999886797075504
Q gi|254780432|r 257 LA--TNEVAACMNQG--SHGST-YGGNVLAMVLGEKVLNIIQSDGFL----ENVINIAKILFEGLTAIKNRFPNMFLEVR 327 (392)
Q Consensus 257 ~~--~~~i~~~~~~~--~~~~T-~~gnpl~~aaa~a~L~~l~~~~l~----~~~~~~g~~l~~~L~~l~~~~~~~v~~vR 327 (392)
+. .++..+.+... ...++ ...+...-.++.+.++. .++.+ ++.+++-+.+.+.|+ +.|+ +.-+.
T Consensus 250 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~al~~--~~~~~~~~~~~~~~rrd~~~~~L~----~~~g-~~~~~ 322 (398)
T PRK08363 250 YFVDPEGKLDEVREALDKLARIRLCPNTPAQFAAIAGLTG--PMDYLEEYMKKLKERRDYIYKRLN----EIPG-ISTTK 322 (398)
T ss_pred EEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHH----HCCC-CEECC
T ss_conf 9758389999999999998550647773999999999866--877899999999999999999997----1799-57558
Q ss_pred CCEEEEEE-EEC----CCHHHHHHH-HHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 64009998-724----998999999-99689899626------8988995589868899999999999999998
Q gi|254780432|r 328 GQGLLIGL-KTV----FSPALLAAK-FRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 328 G~Gl~~~i-e~~----~~~~~~~~~-l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
-.|.+... .+. .++..++.+ +.+.||.+.|. +.+.+||+ |..++++|++++++|++.+++
T Consensus 323 P~G~~y~~~~l~~~~~~~~~ef~~~ll~e~gV~v~PG~~Fg~~g~g~vRls--f~~~~e~l~eal~Rl~~~l~~ 394 (398)
T PRK08363 323 PQGAFYIFPRIEEGPWKDDKEFVLDLLHEAHVLFVHGSGFGEYGAGHFRLV--FLPPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred CCEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHH
T ss_conf 887889837878889999999999999859999989643288999869999--838999999999999999999
No 169
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.57 E-value=2.3e-13 Score=107.88 Aligned_cols=314 Identities=15% Similarity=0.096 Sum_probs=180.0
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC-----CCCCCCCCCCCCCHH
Q ss_conf 799764641022674357878999999999999731450687578189999986520101-----333123565554035
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF-----ADRVFFTNSGAESVE 103 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~-----~~~v~f~~SGseA~e 103 (392)
..|...||+.-| .+-.-..|.|++|+++.++...|.......+.+.++++.+.+..+ .+.++.+++++||..
T Consensus 18 ~~~~~vI~L~iG---~Pd~p~p~~i~~a~~~a~~~~~Y~~~~G~~eLReaia~~~~~~~g~~~~~~~~I~vt~G~~~al~ 94 (357)
T TIGR03539 18 SHPDGIVDLSVG---TPVDPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVA 94 (357)
T ss_pred HCCCCEEECCCC---CCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHH
T ss_conf 689992888799---99999899999999971247998998477999999999999971999799575998688799999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-
Q ss_conf 6777665432001347860023435465654321234553211347999864333222100268875410123322223-
Q gi|254780432|r 104 CAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI- 182 (392)
Q Consensus 104 ~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~- 182 (392)
....+.- -.+|. .||..+-+|......+....+.+ +..++ +.+...+++.++++
T Consensus 95 ~l~~~l~------~~pGD-~Vli~~P~y~~y~~~~~~~g~~~---------------v~~d~---~~~~~~~~~k~i~l~ 149 (357)
T TIGR03539 95 WLPTLLG------LGPGD-TVVIPELAYPTYEVGALLAGATP---------------VAADD---PTELDPVGPDLIWLN 149 (357)
T ss_pred HHHHHHH------CCCCC-EEEECCCCCCCHHHHHHHCCCEE---------------EECCC---HHHCCCCCCEEEEEC
T ss_conf 9999970------79999-89978887700899999859989---------------82388---666797785499989
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCC----CCCCCCEE---ECCCCCC-CCCCCC
Q ss_conf 332222112462101232211022345721310110034444555310111----24545302---1034444-443443
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEW----ANVKPDIM---TIAKGMG-GGFPIG 254 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~----~gi~PDi~---~~gK~l~-gG~P~s 254 (392)
-| +.-.|. ..+++.+++|.++|++||+++|.||+...|.--|+....-. .+-.+.++ .+||..+ .|+=+|
T Consensus 150 ~P-~NPTG~-v~s~~~l~~l~~~a~~~~i~visDEiY~~~~~~~~~~s~l~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG 227 (357)
T TIGR03539 150 SP-GNPTGR-VLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAG 227 (357)
T ss_pred CC-CCCCHH-CCCHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCEEE
T ss_conf 99-896232-0828899999873205558995233247653589884302864537675767999615310045561289
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH----HHHHCCHHHHHHHHHHHHCCCEEEEECCCE
Q ss_conf 2100011122222332234532111100123345543201222101----121000026889999886797075504640
Q gi|254780432|r 255 ACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN----VINIAKILFEGLTAIKNRFPNMFLEVRGQG 330 (392)
Q Consensus 255 av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G 330 (392)
.+++.+++.+.+.......++..+...-+++.+.|+ +++.+.. .++.-+.+.+.| ++ +++ .-.+..|
T Consensus 228 ~~~~~~~li~~l~~~~~~~~~~~~~~~q~a~~~al~---~~~~~~~~~~~~~~rr~~l~~~L----~~-~g~-~~~~p~g 298 (357)
T TIGR03539 228 FVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALG---DDGHVAEQKARYAARRAQLKPAL----EK-AGF-RIDHSEA 298 (357)
T ss_pred EEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHH----HH-CCC-EECCCCE
T ss_conf 996799999999999985677788999999999956---92789999999999999999999----85-797-7626880
Q ss_pred EEEE-EEECCCHHHHHHHHHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 0999-872499899999999689899626------8988995589868899999999999
Q gi|254780432|r 331 LLIG-LKTVFSPALLAAKFRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERI 383 (392)
Q Consensus 331 l~~~-ie~~~~~~~~~~~l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l 383 (392)
-|+. .....+.....+.+.++||.+.|. +.+.+|++ +..++++|.+++++|
T Consensus 299 ~~y~~~~~~~~~~~~~~~l~e~gV~v~PG~~Fg~~g~~~vRis--~~~~~e~l~eal~Rl 356 (357)
T TIGR03539 299 GLYLWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVA--LTATDERIAAAVARL 356 (357)
T ss_pred EEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEE--ECCCHHHHHHHHHHC
T ss_conf 6999875899999999999969989947874478999979999--729999999999857
No 170
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.56 E-value=7.9e-13 Score=104.32 Aligned_cols=320 Identities=18% Similarity=0.205 Sum_probs=199.8
Q ss_pred CCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHH
Q ss_conf 9764641022674357878999999999999731450687578189999986520101--33312356555403567776
Q gi|254780432|r 31 GIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKT 108 (392)
Q Consensus 31 G~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aikl 108 (392)
.+++||+.++ -+.+|-. |.+++|+.+++... +.|..+...+|-+.|.+..+ .+.+..+|+.+|+...+++.
T Consensus 28 ~~~~ikLssN--ENP~g~s-~~v~~al~~~~~~~----~~YPd~~~~~Lr~~iA~~~gv~~e~I~vgnGs~E~i~~~~~a 100 (366)
T PRK01533 28 DHSFVKLASN--ENPFGCS-PRVLDELQKSWLDH----ALYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRA 100 (366)
T ss_pred CCCEEEEECC--CCCCCCC-HHHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHH
T ss_conf 8876995089--9999999-99999999878745----579697789999999998682821299817899999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC-CCCCCCC
Q ss_conf 654320013478600234354656543212345532113479998643332221002688754101233222-2333222
Q gi|254780432|r 109 ARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI-LIEPIQG 187 (392)
Q Consensus 109 ar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav-i~Epv~g 187 (392)
.- .+| +.|+....+|-.-...+. +.|-....- |... ...|++.+.+.+.++...+ |.-|=.=
T Consensus 101 ~~-------~~g-d~vl~~~Ptf~~Y~~~a~-~~g~~~~~v---~l~~-----~~~d~~~i~~~~~~~~klv~l~nPNNP 163 (366)
T PRK01533 101 VL-------KAG-DNIVTAGATFPQYRHHAI-IEGCEVKEV---ALNN-----GVYDLDEISSVVDNDTKIVWICNPNNP 163 (366)
T ss_pred HH-------CCC-CEEEECCCCCCHHHHHHH-HCCCEEEEE---ECCC-----CCCCHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 94-------799-823658988645799999-808648998---3677-----866999999750659878997799999
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC-CCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCC
Q ss_conf 2112462101232211022345721310110034444555310-11124545302---1034444-44344321000111
Q gi|254780432|r 188 EGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFA-YEWANVKPDIM---TIAKGMG-GGFPIGACLATNEV 262 (392)
Q Consensus 188 ~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~-~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i 262 (392)
. |.. .+.+-+..+.+.|.+ +.++|+||-..-|...+.+.. .....--|.++ +|+|..| .|+-+|.+++++++
T Consensus 164 T-G~~-~~~~~l~~ll~~~~~-~~~vviDEAY~ef~~~~~~~~~~~l~~~~~NliVlrTfSK~~glaGlRiGy~ia~~~i 240 (366)
T PRK01533 164 T-GTY-VNDRKLTQFIEGISE-NTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEEL 240 (366)
T ss_pred C-CCC-CCHHHHHHHHHHCCC-CEEEEECHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCHHCCCCCHHHHHHHCCHHH
T ss_conf 7-674-670658999862787-7378612878976425787105778761898489972743236830345366289999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCHH
Q ss_conf 22222332234532111100123345543201222101121000026889999886797075504640099987249989
Q gi|254780432|r 263 AACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSPA 342 (392)
Q Consensus 263 ~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~ 342 (392)
.+.++... ..|+-|.++.+||.++|+ +++++++..+.-..-+..++.+.+.. ++ .-....+=++-++. .+..
T Consensus 241 i~~l~~~~--~p~~vn~la~~aa~aaL~---d~~~~~~~~~~~~e~~~~~~~~l~~~-g~-~v~pS~aNFilv~~-~~~~ 312 (366)
T PRK01533 241 IEKLNVVR--LPFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKEN-EI-PFYQSQTNFIFLPV-ENGG 312 (366)
T ss_pred HHHHHHHC--CCCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CC-EECCCCCCEEEEEC-CCHH
T ss_conf 99999855--898843999999999967---99999999999999999999999878-68-58999787799866-9999
Q ss_pred HHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999996898996268988995589868899999999999999998
Q gi|254780432|r 343 LLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 343 ~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
.+.+.|.++|+++++.. |.+|++ +=|.+|-++++++|++.+.+
T Consensus 313 ~l~~~L~~~GIlVR~~~-~~iRIs---vgt~eeN~~ll~aLke~~e~ 355 (366)
T PRK01533 313 EIYEACAHAGFIIRPFP-NGVRIT---VGTREQNEGVISVLQQHFEN 355 (366)
T ss_pred HHHHHHHHCCEEEEECC-CCEEEE---CCCHHHHHHHHHHHHHHHHH
T ss_conf 99999996898998995-987882---79999999999999999985
No 171
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.54 E-value=5.4e-13 Score=105.39 Aligned_cols=329 Identities=19% Similarity=0.219 Sum_probs=190.8
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC-----CCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 7646410226743578789999999999997314-----50687578189999986520101----33312356555403
Q gi|254780432|r 32 IPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW-----HVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~-----~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
...|||.-| --.+ ...+.|++|+.++++... |++.....+.+..+++.+.+..+ .+.+..++++++|.
T Consensus 34 ~dVI~l~iG--~Pdf-~~P~~i~~a~~~a~~~~~~~~~~Y~~~~G~~eLReaIa~~~~~~~g~~~~pe~Iiit~Ga~~al 110 (396)
T PRK06836 34 ENVFDFSLG--NPDV-EPPAAVKEALRELAEEEDPGMHGYMPNAGYPEVREAVAESLNARFGTPLTADHIVMTCGAAGAL 110 (396)
T ss_pred CCEEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHH
T ss_conf 985886895--9899-9779999999999967998888779874769999999999999868899589889858879999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++..- .+| +.||..+-+|..-........+.+..- |... .. ...|++++++.+.+++-++++
T Consensus 111 ~~~~~~ll-------~pG-D~Vlvp~P~y~~y~~~~~~~g~~~v~v----~~~~--e~-~~~d~~~l~~~i~~~tk~iil 175 (396)
T PRK06836 111 NVVLKALL-------NPG-DEVIIFAPYFVEYKFYVDNHGGKLVVV----PPDT--ED-FQPDLDALEAAITPKTKAVII 175 (396)
T ss_pred HHHHHHHC-------CCC-CEEEECCCCCHHHHHHHHHCCCEEEEE----CCCC--CC-CCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999966-------999-989982786506899999849979993----1676--56-767999999736756629998
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCC------CCCEEEECCCCCCCCCCCCCCCC--CCCCCCCCEEECCCCCC-CCCC
Q ss_conf -33222211246210123221102234------57213101100344445553101--11245453021034444-4434
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDD------IDALLIFDEVQTGYGRTGKLFAY--EWANVKPDIMTIAKGMG-GGFP 252 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~------~g~llI~DEV~tG~GRtG~~f~~--e~~gi~PDi~~~gK~l~-gG~P 252 (392)
-| +.-.|. +.+++.++++.++|++ |++++|.||+...+--.|..+.+ +.++-+-=+-.+||..+ .|+=
T Consensus 176 nsP-~NPTG~-v~s~e~l~~i~~l~~~~~~~~~h~i~vIsDEiY~~l~fd~~~~~s~~~~~d~~i~i~S~SK~~~m~G~R 253 (396)
T PRK06836 176 NSP-NNPTGV-IYSEETLKALGALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYKNSIVVYSFSKSLSLPGER 253 (396)
T ss_pred CCC-CCCCCC-CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCC
T ss_conf 689-898998-679999999999999865752886799805740753138987899577478299996464220467311
Q ss_pred CCCCCCCCCCCCCC---CCCCCC-CCC--CCCCCCH-HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEE
Q ss_conf 43210001112222---233223-453--2111100-1233455432012221011210000268899998867970755
Q gi|254780432|r 253 IGACLATNEVAACM---NQGSHG-STY--GGNVLAM-VLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLE 325 (392)
Q Consensus 253 ~sav~~~~~i~~~~---~~~~~~-~T~--~gnpl~~-aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~ 325 (392)
+|.+++.+++.+.. +..... .+. ...|... .++.+.++ ...-.+..+++-+.+.+.|+++ ++ .-
T Consensus 254 iG~iv~~~~i~~~~~~~~~~~~~~~~~~~v~a~~~~q~a~~~~~~---~~~~~~~y~~rrd~l~~~L~~~-----g~-~~ 324 (396)
T PRK06836 254 IGYIAVNPEMEDADDLMAALVFANRILGFVNAPSLMQRVVAKLQD---ATVDISIYKRRRDLLYDALTEL-----GF-EF 324 (396)
T ss_pred EEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHC-----CC-EE
T ss_conf 699986889999999999999876550556588999999999746---7266999999999999999984-----98-63
Q ss_pred ECCCEEEEEE-EE-CCCHHHHHHHHHHCCEEEEEC----CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 0464009998-72-499899999999689899626----898899558986889999999999999999852
Q gi|254780432|r 326 VRGQGLLIGL-KT-VFSPALLAAKFRDECLLTAPS----SDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 326 vRG~Gl~~~i-e~-~~~~~~~~~~l~~~Gll~~~~----~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
++..|.|+.+ .. ..+...+++.++++||.+.|. +++.+||+ +..++++|++++++|++.++++.
T Consensus 325 ~~P~Gafyl~~~~p~~d~~~f~~~l~e~gV~vvPG~~Fg~~g~vRls--~a~~~e~i~eal~rl~~~~~e~k 394 (396)
T PRK06836 325 VKPQGAFYLFPKSPIEDDVAFVEKAQKYNILLVPGSGFGAPGYFRLA--YCVDTEQIERSLPAFEKLAKEYK 394 (396)
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCEEEE--ECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 17881689986189999999999999699999827435999808999--70899999999999999999863
No 172
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.54 E-value=1.7e-12 Score=102.20 Aligned_cols=324 Identities=21% Similarity=0.220 Sum_probs=180.1
Q ss_pred EEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH------HHH-HHHHHCC--CCCCCCCCCCCCCHHH
Q ss_conf 464102267435787899999999999973145068757818999------998-6520101--3331235655540356
Q gi|254780432|r 34 FLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEI------FAN-HLIHSTF--ADRVFFTNSGAESVEC 104 (392)
Q Consensus 34 yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~------la~-~L~~~~~--~~~v~f~~SGseA~e~ 104 (392)
|+|-.++ -.-.|++++++.+.+.+.. .++...+....+ -++ ++.+..+ .+.+.|+.|+||++-.
T Consensus 2 YlD~AAt------t~~~~~V~~a~~~~~~~~~-~np~~~h~~~~~a~~~~e~aR~~iA~~lga~~~eIvFt~~~T~a~n~ 74 (379)
T TIGR03402 2 YLDNNAT------TRVDPEVLEAMLPYFTEYF-GNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNT 74 (379)
T ss_pred CCCCCCC------CCCCHHHHHHHHHHHHHCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
T ss_conf 4417665------8899999999999999658-99776589999999999999999999829996739992887999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 77766543200134786002343546565432123455321134799986433322210026887541012332222333
Q gi|254780432|r 105 AIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEP 184 (392)
Q Consensus 105 Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Ep 184 (392)
+++-.... .+++..||...-- |...+..+. .. -++++.-..-.+.....-|++++++.+.+++..|.+--
T Consensus 75 ~i~~~~~~-----~~~~d~Ii~s~~e-H~a~~~~~~---~l-~~~g~~v~~~~~~~~g~id~~~l~~~l~~~T~lvs~~~ 144 (379)
T TIGR03402 75 AIKSALAA-----QPEKRHIITTAVE-HPAVLSLCQ---HL-EKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMW 144 (379)
T ss_pred HHHHHHHH-----CCCCCEEEEECCH-HHHHHHHHH---HH-HHCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEC
T ss_conf 99999986-----7999999980131-045667999---99-96598899970378982642667887267862899612
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCCCCCCCCCCCCC
Q ss_conf 222211246210123221102234572131011003444455531011124545302103--444444344321000111
Q gi|254780432|r 185 IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA--KGMGGGFPIGACLATNEV 262 (392)
Q Consensus 185 v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g--K~l~gG~P~sav~~~~~i 262 (392)
+.+.-|.+.| ++++.++|+++|+++++|=+|. +|.. .+-.+.+ ..|+++++ | +.|-.=+|++..+++.
T Consensus 145 ~sn~tG~i~p----v~~I~~~~~~~g~~~~vDa~Q~-~g~~--pidv~~~--~~D~~~~S~hK-~~GP~G~G~Ly~r~~~ 214 (379)
T TIGR03402 145 ANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VGKI--PIDLKEM--NIDMLSLSGHK-LHGPKGVGALYIRKGT 214 (379)
T ss_pred CCCCCCHHHH----HHHHHHHHHHCCCEEEEECCCC-CCCC--CCCHHHH--CCCCEECCHHH-CCCCCCEEEEEECCCC
T ss_conf 5788870178----9999999976398899453112-4664--6403441--57721202111-3688725999982676
Q ss_pred CCCCCCCCCCCCC-----CC--CCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEE--E--ECCC
Q ss_conf 2222233223453-----21--11100123345543201--222101121000026889999886797075--5--0464
Q gi|254780432|r 263 AACMNQGSHGSTY-----GG--NVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFL--E--VRGQ 329 (392)
Q Consensus 263 ~~~~~~~~~~~T~-----~g--npl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~--~--vRG~ 329 (392)
.++|...|... .| |..++++..+++++..+ ++..++.+.+.++|.+++ .+..|++.. + -|--
T Consensus 215 --~~~P~~~Gg~~e~~~~~GT~n~~~i~gl~~a~~~~~~~~~~~~~~~~~l~~~l~~~l---l~~~~~~~i~g~~~~r~p 289 (379)
T TIGR03402 215 --RFRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGL---LARIPDARLNGDPTKRLP 289 (379)
T ss_pred --CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCCEEECCCHHHCCC
T ss_conf --668767888877776789712999999999999999759999999999999999999---850898275478666488
Q ss_pred E-EEEEEEECCCHHHHHHHHHHCCEEEEEC-----------------------CCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 0-0999872499899999999689899626-----------------------898899558986889999999999999
Q gi|254780432|r 330 G-LLIGLKTVFSPALLAAKFRDECLLTAPS-----------------------SDNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 330 G-l~~~ie~~~~~~~~~~~l~~~Gll~~~~-----------------------~~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
+ +-+.++. .+.+.+...+-++|+.++.. ....||+++...-|++|||++++.|++
T Consensus 290 ~~~~~~~~~-~~~~~i~~~L~~~gI~v~~G~~Ca~~~~~ps~vL~a~g~~~~~~~g~iRvS~~~ynT~edId~li~aL~~ 368 (379)
T TIGR03402 290 NTVNISFEY-IEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred CCEEECCCC-CCHHHHHHHHCCCCEEEECCHHCCCCCCCHHHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 730323699-8999999984518929975032159998624999975998333395699973899999999999999999
Q ss_pred HHHHH
Q ss_conf 99985
Q gi|254780432|r 386 TAIKL 390 (392)
Q Consensus 386 al~~L 390 (392)
++.+|
T Consensus 369 iv~~l 373 (379)
T TIGR03402 369 IIARL 373 (379)
T ss_pred HHHHH
T ss_conf 99999
No 173
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.54 E-value=6.3e-13 Score=104.97 Aligned_cols=314 Identities=16% Similarity=0.135 Sum_probs=176.5
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC-----CCCCCCCCCCCCCHH
Q ss_conf 799764641022674357878999999999999731450687578189999986520101-----333123565554035
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF-----ADRVFFTNSGAESVE 103 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~-----~~~v~f~~SGseA~e 103 (392)
..|...||+.-| . .-.--.|.|++|+.+..+...|.......+.++.+++.+.+..+ .+.++.+++++|+..
T Consensus 24 ~~~~~vI~l~iG--~-Pd~p~P~~v~~a~~~a~~~~~Y~~~~G~~~LReAIa~~~~~~~g~~~~~~~~V~vt~Ga~~~l~ 100 (364)
T PRK07865 24 AHPDGIVDLSVG--T-PVDPVPPVIQEALAAAADAPGYPTTAGTPELREAIVAWLARRYGVTGLDPAAVLPVIGSKELVA 100 (364)
T ss_pred HCCCCEEECCCC--C-CCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHH
T ss_conf 789983985698--9-9899899999999962489998998887999999999999983989899687997698899999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 67776654320013478600234354656543212345532113479998643332221002688754101233222233
Q gi|254780432|r 104 CAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIE 183 (392)
Q Consensus 104 ~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~E 183 (392)
...++.- . .+| +.||..+-+|.....++...... | ++. +.+.+...+..+.+++-
T Consensus 101 ~l~~~l~---~---~pG-D~Vlip~P~Yp~y~~~~~~~g~~--------~-------v~~---d~~~~~~~~~~~li~ln 155 (364)
T PRK07865 101 WLPTLLG---L---GPG-DVVVVPELAYPTYEVGARLAGAT--------V-------VRA---DSLTELGPQTPALIWLN 155 (364)
T ss_pred HHHHHHC---C---CCC-CEEEECCCCCCHHHHHHHHCCCE--------E-------EEC---CCHHHCCCCCCEEEEEC
T ss_conf 9999970---7---999-98998667860199999981986--------5-------610---78877598775299989
Q ss_pred -CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCC---CCCCCC-EE---ECCCCCC-CCCCCC
Q ss_conf -32222112462101232211022345721310110034444555310111---245453-02---1034444-443443
Q gi|254780432|r 184 -PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEW---ANVKPD-IM---TIAKGMG-GGFPIG 254 (392)
Q Consensus 184 -pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~---~gi~PD-i~---~~gK~l~-gG~P~s 254 (392)
| +.-.|. ..+.+.+++|.++|++||+++|.||+...|.--|.....-. .+...| ++ .+||..+ .|+-+|
T Consensus 156 sP-~NPTG~-v~s~e~l~~l~~la~~~~i~vi~DE~Y~~l~~~~~~~s~l~p~~~~~~~~~vi~i~S~SK~~~~~GlRiG 233 (364)
T PRK07865 156 SP-SNPTGR-VLGVDHLRKVVAWARERGAVVASDECYLGLGWDAEPVSVLDPRVCGGDHTGLLAVHSLSKQSNLAGYRAG 233 (364)
T ss_pred CC-CCCCCC-CCCHHHHHHHHHHHHHCEEEEEECCCHHHHCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCEEE
T ss_conf 99-698551-1769999999999776718998254257642589886513864427775757999436523067774489
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHCCCCC----CHHHHHCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 2100011122222332-2345321111001233455432012221----0112100002688999988679707550464
Q gi|254780432|r 255 ACLATNEVAACMNQGS-HGSTYGGNVLAMVLGEKVLNIIQSDGFL----ENVINIAKILFEGLTAIKNRFPNMFLEVRGQ 329 (392)
Q Consensus 255 av~~~~~i~~~~~~~~-~~~T~~gnpl~~aaa~a~L~~l~~~~l~----~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~ 329 (392)
.+++.+++++.+.... +..+....|+ -.++.+.|+ ++..+ ++.+++-+.+.+.|++ . ++-. .+..
T Consensus 234 ~i~~~~~li~~l~~~~~~~~~~~~~~~-Q~a~~aal~---~~~~~~~~~~~y~~rr~~l~~~L~~----~-g~~~-~~p~ 303 (364)
T PRK07865 234 FVAGDPALVAELLAVRKHAGMMVPAPV-QAAMVAALG---DDAHVREQRERYARRRAVLLPALEA----A-GFTV-DHSE 303 (364)
T ss_pred EEECCHHHHHHHHHHHHHCCCCCCHHH-HHHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHH----C-CCEE-CCCC
T ss_conf 996799999999999985502378999-999999957---9399999999999999999999986----7-9766-2699
Q ss_pred E-EEEEEEECCCHHHHHHHHHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 0-0999872499899999999689899626------89889955898688999999999999
Q gi|254780432|r 330 G-LLIGLKTVFSPALLAAKFRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIE 384 (392)
Q Consensus 330 G-l~~~ie~~~~~~~~~~~l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~ 384 (392)
| +++=++...+.....+.+.++||.+.|. +.+.+||+ +..++++|++++++|.
T Consensus 304 G~fylw~~~~~~~~~~~~~l~e~gV~v~PG~~Fg~~g~~~vRls--~~~~~e~l~ea~~RLa 363 (364)
T PRK07865 304 AGLYLWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVA--LTATDERIAAAVERLT 363 (364)
T ss_pred CEEEEEEECCCCHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEE--ECCCHHHHHHHHHHHC
T ss_conf 22799888899999999999979989918874368999869999--6598999999999868
No 174
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.53 E-value=6.3e-13 Score=105.00 Aligned_cols=324 Identities=17% Similarity=0.168 Sum_probs=185.3
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHH
Q ss_conf 99764641022674357878999999999999731450687578189999986520101--3331235655540356777
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIK 107 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aik 107 (392)
.-.++|||.++ .+.+|-. |.+++|+++++..+. .|..+...+|.+.|.+..+ .+.+..+|+.+|....+.+
T Consensus 20 ~~~~iidlSsN--~NP~gpp-p~v~~ai~~~~~~~~----~YPd~~~~~Lr~aiA~~~gv~~e~I~~gnGs~Eli~~~~~ 92 (358)
T PRK07392 20 PPSAILDFSAS--INPLGPP-ESVIAAIQSALSALR----HYPDPDYRELREALAQHHQLPPEWILPGNGAAELLTWAGR 92 (358)
T ss_pred CHHHCEECCCC--CCCCCCC-HHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHH
T ss_conf 99984660899--9998989-899999999888886----4899568999999999859588889877579999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 66543200134786002343546565432123455321134799986433322210026887541012332222333222
Q gi|254780432|r 108 TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQG 187 (392)
Q Consensus 108 lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g 187 (392)
. . + .++ +++....+|---...+. +.|-....- |...... ....+.+.+.......-..+|.-|=-=
T Consensus 93 ~---~----~-~~~-~v~i~~Ptf~~Y~~~~~-~~g~~v~~v---pl~~~~~-~~~~~~~~~~~~~~~~~~i~l~nPNNP 158 (358)
T PRK07392 93 E---L----A-QLR-EVYLLTPAFGDYRRALR-AFGATVKEL---PLPLSGE-ASLTELQLLPPQLTPNDGLLLNNPHNP 158 (358)
T ss_pred H---H----C-CCC-EEEEECCCCHHHHHHHH-HCCCEEEEE---ECCCCCC-CCCCHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 9---7----5-898-69995785189999999-839889998---5775556-782056788755899878997689999
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC-CCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCC
Q ss_conf 2112462101232211022345721310110034444555310-11124545302---1034444-44344321000111
Q gi|254780432|r 188 EGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFA-YEWANVKPDIM---TIAKGMG-GGFPIGACLATNEV 262 (392)
Q Consensus 188 ~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~-~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i 262 (392)
. |.. .+.+ .|++++++++ ++|+||...-|-..+.... .....-.|.++ +++|..+ .|+-+|.+++++++
T Consensus 159 T-G~~-~~~~---~l~~l~~~~~-~vvvDEaY~ef~~~~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRlGy~ia~~~~ 232 (358)
T PRK07392 159 T-GKL-WSRE---AILPLLEQFA-LVVVDEAFMDFLPPAAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDR 232 (358)
T ss_pred C-CCC-CCHH---HHHHHHHCCC-EEEEECHHHHHCCCCCCCCHHHHHHCCCCEEEEEECHHHHHCCCCCCEEEECCHHH
T ss_conf 7-765-6879---9998863289-99995715541688655678999753586799961628765744100000239999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCHH
Q ss_conf 22222332234532111100123345543201222101121000026889999886797075504640099987249989
Q gi|254780432|r 263 AACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSPA 342 (392)
Q Consensus 263 ~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~ 342 (392)
++.++... ..|.-|.++.+++.+.|+ +.++.++..+.-..-++.|.+...+.+++ .-.-..+-++-++...+..
T Consensus 233 i~~l~~~~--~p~~vn~~a~~aa~aal~---~~~~~~~~~~~~~~~R~~l~~~L~~l~g~-~v~ps~anF~l~~~~~~~~ 306 (358)
T PRK07392 233 LQRWQQWR--DPWPVNGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGL-TPLPSAANFLLVQSQGSAL 306 (358)
T ss_pred HHHHHHHC--CCCCCCHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHCCCCC-EECCCCCEEEEEECCCCHH
T ss_conf 99999853--887778999999999825---99999999999999999999999718997-7888850499997699999
Q ss_pred HHHHHHHH-CCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999996-89899626------8988995589868899999999999999998
Q gi|254780432|r 343 LLAAKFRD-ECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 343 ~~~~~l~~-~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
.++.++.+ +|++++++ +++.+|++ +=|.+|-+++++.|++.|+.
T Consensus 307 ~~~~~ll~~~gI~Vr~~~~f~~~g~~~iRis---vgt~een~~li~al~~iLa~ 357 (358)
T PRK07392 307 QLQEELLQQHRILIRDCLSFPELGDRYFRVA---VRTEAENQRLLSALAAILAN 357 (358)
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCEEEEE---ECCHHHHHHHHHHHHHHHHC
T ss_conf 9999999719889986888888899989998---39999999999999999706
No 175
>PRK10534 L-threonine aldolase; Provisional
Probab=99.53 E-value=2.3e-13 Score=107.81 Aligned_cols=310 Identities=15% Similarity=0.231 Sum_probs=173.4
Q ss_pred EEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC-HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 4641022674357878999999999999731450687578-189999986520101333123565554035677766543
Q gi|254780432|r 34 FLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQS-TQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRY 112 (392)
Q Consensus 34 yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~-~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~ 112 (392)
.|||.|- +.=--+|++.+||.++- . ....|.. |...+|.+++.+.++.+..+|+.|||-||-.||+.-
T Consensus 1 ~id~rSD----tvt~p~~~m~~Am~~A~--~--GddvYgeDptv~~Le~~~A~l~G~eaalFvpsGTmaN~iAl~~~--- 69 (333)
T PRK10534 1 MIDLRSD----TVTRPSRAMLEAMMAAP--V--GDDVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSH--- 69 (333)
T ss_pred CCCCCCC----CCCCCCHHHHHHHHCCC--C--CCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH---
T ss_conf 9246544----28999999999997375--5--77545769899999999999858971899578757899999984---
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCC--CCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC-CCC-----CCCCCCC
Q ss_conf 20013478600234354656543--2123-4553211347999864333222100268875410-123-----3222233
Q gi|254780432|r 113 HYMAGKTNKFRIVTFEGAFHGRT--LATI-SAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQI-SND-----TAAILIE 183 (392)
Q Consensus 113 ~~~~g~t~r~~ii~~~~~yHG~t--~~a~-s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~-~~~-----iAavi~E 183 (392)
. .++- .||+-+.+ |=.. .++. .+++-.. .+..+...+ .. +++.+...+ +++ +..+-+|
T Consensus 70 -~---~~g~-~vi~~~~s-HI~~~E~Gg~a~l~g~~~--~~i~~~~~g--~~---~~~~v~~~i~~~~~h~~~~~lv~le 136 (333)
T PRK10534 70 -C---ERGE-EYIVGQAA-HNYLYEAGGAAVLGSIQP--QPIDAAADG--TL---PLDKVAAKIKPDDIHFARTRLLSLE 136 (333)
T ss_pred -C---CCCC-EEEECCCC-CCHHCCCCCHHHHCCCCE--EEECCCCCC--CC---CHHHHHHHCCCCCCCCCCEEEEEEE
T ss_conf -7---8998-69875777-610114664898769521--551478898--24---8999998618788766762466554
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC-------CE--EECCCCCCCCCCCC
Q ss_conf 3222211246210123221102234572131011003444455531011124545-------30--21034444443443
Q gi|254780432|r 184 PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKP-------DI--MTIAKGMGGGFPIG 254 (392)
Q Consensus 184 pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~P-------Di--~~~gK~l~gG~P~s 254 (392)
- .++|. .+|.++++.+.++|+++|+.+-.|=- |. |-+.-.+|+.| |. +|++|+||. |+|
T Consensus 137 n--T~~G~-v~p~~el~~i~~~a~~~gl~vHlDGA-----Rl--~NA~~a~g~~~~e~~~~~Dsvs~clsKgLGa--p~G 204 (333)
T PRK10534 137 N--THNGK-VLPREYLKEAWEFTRERNLALHVDGA-----RI--FNAVVAYGCELKEITQYCDSFTICLSKGLGT--PVG 204 (333)
T ss_pred E--CCCCE-ECCHHHHHHHHHHHHHCCCEEEECHH-----HH--HHHHHHCCCCHHHHHHHCCEEEEEEECCCCC--CCC
T ss_conf 0--35885-36899999999999975983762327-----77--6446542999999997589889874067887--332
Q ss_pred CCC-CCCCCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEE
Q ss_conf 210-00111222223--322345321111001233455432012221011210000268899998867970755046400
Q gi|254780432|r 255 ACL-ATNEVAACMNQ--GSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGL 331 (392)
Q Consensus 255 av~-~~~~i~~~~~~--~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl 331 (392)
+++ ++++..+.... ...|+-+.-.-+-.|+++..|+.... .+..-..+.++|.++|+++.- + +..+. ...
T Consensus 205 svl~g~~~~i~~a~~~RK~~GGgmrQ~g~lAAa~l~aL~~~~~--rl~~dH~nA~~La~~L~~~g~---~-~~~~e-TN~ 277 (333)
T PRK10534 205 SLLVGNRDYIKRAIRWRKMTGGGMRQAGILAAAGLYALKHNVA--RLQEDHDNAAWLAQQLREAGA---D-VMRQD-TNM 277 (333)
T ss_pred EEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHCCC---C-CCCCC-CCE
T ss_conf 1464689999999999998546555899999999999963999--899999989999999997698---7-48997-647
Q ss_pred EEEEEECC-CHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99987249-98999999996898996268988995589868899999999999999998
Q gi|254780432|r 332 LIGLKTVF-SPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 332 ~~~ie~~~-~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
++ +.+.. ....+.+.++++|++... +..+||.-++-+|++++|++++.+.+.+.+
T Consensus 278 vf-~~~~~~~~~~l~~~~~~~gv~~~~--~~~vR~Vth~~it~~dv~~~i~~~r~~l~~ 333 (333)
T PRK10534 278 LF-VRVGEENAAALGEYMRERNVLINA--SPIVRLVTHLDVSREQLAEVVAHWRAFLAR 333 (333)
T ss_pred EE-EECCHHHHHHHHHHHHHCCEEECC--CCCEEEEEECCCCHHHHHHHHHHHHHHHCC
T ss_conf 99-977877799999999987967579--981899980899999999999999999719
No 176
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.53 E-value=1.4e-12 Score=102.79 Aligned_cols=280 Identities=18% Similarity=0.162 Sum_probs=162.1
Q ss_pred HHHHHHHHCC---CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9986520101---3331235655540356777665432001347860023435465654321234553211347999864
Q gi|254780432|r 79 FANHLIHSTF---ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKI 155 (392)
Q Consensus 79 la~~L~~~~~---~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~ 155 (392)
..++|.+..+ .+-++|+-|||.|+|+++.=.. ....+++...++..|.-+.-+.- +.+.....
T Consensus 37 ~~~~L~~~~~~~~~~~v~~~gsgt~a~ea~~~n~~--------~~~~kvlv~~~G~fg~r~~~~a~------~~g~~~~~ 102 (356)
T cd06451 37 ILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL--------EPGDKVLVGVNGVFGDRWADMAE------RYGADVDV 102 (356)
T ss_pred HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCC--------CCCCCEEEEEEEECCCCHHHHHH------HCCCCEEE
T ss_conf 99999999589998489995770899999998526--------88881478853040541676441------15972399
Q ss_pred CCCCCCCCHHHHHHHHHCCC-CC---CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 33322210026887541012-33---222233322221124621012322110223457213101100344445553101
Q gi|254780432|r 156 EGFDQAKFCDLQSLKNQISN-DT---AAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY 231 (392)
Q Consensus 156 ~~~~~~~~~d~~~l~~~~~~-~i---Aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~ 231 (392)
-.++.-..-|.+.+++.+.+ ++ +.+-.|+. .|+..+ ++.+.++|++||+++++|=|++ +|- ...-.
T Consensus 103 i~~~~~~~~~~~~v~~~l~~~~~~~v~~~h~ets---tG~~~~----l~~i~~~~~~~~~~~~vDavss-~g~--~~id~ 172 (356)
T cd06451 103 VEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETS---TGVLNP----LEGIGALAKKHDALLIVDAVSS-LGG--EPFRM 172 (356)
T ss_pred EECCCCCCCCHHHHHHHHHCCCCCEEEEECCCCC---CCCCCC----HHHHHHHHHHCCEEEEEECCHH-HCC--CCCCC
T ss_conf 8689999789899998863389658999665365---101477----5889998741572799725311-055--65025
Q ss_pred CCCCCCCCEEECC--CCCCCCCC-CCCCCCCCCCCCCCCCC------------------CCCCCCCCCCCC-HHHHHHHH
Q ss_conf 1124545302103--44444434-43210001112222233------------------223453211110-01233455
Q gi|254780432|r 232 EWANVKPDIMTIA--KGMGGGFP-IGACLATNEVAACMNQG------------------SHGSTYGGNVLA-MVLGEKVL 289 (392)
Q Consensus 232 e~~gi~PDi~~~g--K~l~gG~P-~sav~~~~~i~~~~~~~------------------~~~~T~~gnpl~-~aaa~a~L 289 (392)
+.||+ |+++.| |+|++ .| +|.++.+++..+.+.+. ....|....|+. ..+-.++|
T Consensus 173 ~~~gi--D~~~~ssqK~l~~-ppGl~~~~vs~~a~~~~~~~~~~~~~y~dl~~~~~~~~~~~~~~~Tp~~~~i~al~~AL 249 (356)
T cd06451 173 DEWGV--DVAYTGSQKALGA-PPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREAL 249 (356)
T ss_pred CCCCE--EEEEECCCCCCCC-CCCEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 66660--5999768864458-99668999889999998603899877779899998761489878898806889999999
Q ss_pred HHHHCCC---CCCHHHHHCCHHHHHHHHHHHHCCCEEE-EECCCEEEEEEEECC--CHHHHHHHHH-HCCEEEEEC----
Q ss_conf 4320122---2101121000026889999886797075-504640099987249--9899999999-689899626----
Q gi|254780432|r 290 NIIQSDG---FLENVINIAKILFEGLTAIKNRFPNMFL-EVRGQGLLIGLKTVF--SPALLAAKFR-DECLLTAPS---- 358 (392)
Q Consensus 290 ~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~v~-~vRG~Gl~~~ie~~~--~~~~~~~~l~-~~Gll~~~~---- 358 (392)
+.+.++. ..+|.+++.++++++|+++--+ .+.. +.| ...+.++..+. +...+.+.+. +.|+.+.+.
T Consensus 250 ~~i~~~G~~~~~~r~~~l~~~l~~~l~~lGl~--~~~~~~~~-S~~vt~~~~p~g~~~~~~~~~l~~~~~i~i~~g~g~~ 326 (356)
T cd06451 250 DLILEEGLENRWARHRRLAKALREGLEALGLK--LLAKPELR-SPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPT 326 (356)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCHHHC-CCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCC
T ss_conf 99986065899999999999999999975996--56893654-9827999799999999999999997899997886656
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 898899558986889999999999999999
Q gi|254780432|r 359 SDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 359 ~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
.++++|+.--=.++.++++.+++.|+++|+
T Consensus 327 ~~~~fRIg~mG~~~~~di~~~l~al~~~Lk 356 (356)
T cd06451 327 AGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 895898618989999999999999999859
No 177
>PRK12414 putative aminotransferase; Provisional
Probab=99.53 E-value=1.5e-12 Score=102.53 Aligned_cols=326 Identities=16% Similarity=0.167 Sum_probs=187.2
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCC-CCCCCCHHHHHHHHHHHHHCC----C-CCCCCCCCCCCCH
Q ss_conf 99764641022674357878999999999999731-450-687578189999986520101----3-3312356555403
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHV-SNLYQSTQQEIFANHLIHSTF----A-DRVFFTNSGAESV 102 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~-~~~~~~~~~~~la~~L~~~~~----~-~~v~f~~SGseA~ 102 (392)
.+++.|++.-| .-.+ --.|+|++|+.++++.- .++ ......+.+.++++.+.+..+ . +.++.++++++|.
T Consensus 27 ~~~dvI~l~~G--~Pd~-~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~dp~~~i~vt~G~~~al 103 (384)
T PRK12414 27 AQHDALNLSQG--APNF-APDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPDTEVTVIASASEGL 103 (384)
T ss_pred CCCCCEECCCC--CCCC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHH
T ss_conf 38996881898--9999-99899999999999619998989987199999999999999689999888099847989999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++..- .+| +.||..+-+|-+...........+..- +.. .+++ ..|.+++++.+.+++.++++
T Consensus 104 ~~~~~al~-------~pG-D~Vlv~~P~y~~y~~~~~~~Ga~~v~v-~~~--~~~~----~~d~~~l~~~~~~~tk~iil 168 (384)
T PRK12414 104 YAAISALV-------HPG-DEVIYFEPSFDSYAPIVRLQGATPVAI-KLS--PEHF----RVNWDEVAAAITPRTRMIIV 168 (384)
T ss_pred HHHHHHHC-------CCC-CEEEEECCCCHHHHHHHHHCCCEEEEE-ECC--CCCC----CCCHHHHHHHCCCCCEEEEE
T ss_conf 99999967-------999-989990897065699999859989998-668--5568----88999999627778669997
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC-C-CCCCCC---CEEECCCCCC-CCCCCCCC
Q ss_conf 3322221124621012322110223457213101100344445553101-1-124545---3021034444-44344321
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY-E-WANVKP---DIMTIAKGMG-GGFPIGAC 256 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~-e-~~gi~P---Di~~~gK~l~-gG~P~sav 256 (392)
-.=+.--|. ..+.+.+++|.++|++||+++|.||+...+.=.|..+.+ - .-+... =+-.+||.++ .|+=+|.+
T Consensus 169 ~~P~NPTG~-v~s~e~l~~l~~la~~~~i~ii~DE~Y~~l~f~g~~~~s~~~~~~~~~~~I~i~S~SK~~~~~G~RvG~~ 247 (384)
T PRK12414 169 NTPHNPTAT-VFSEADLARLAQLTRGTDIVVLSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYC 247 (384)
T ss_pred CCCCCCCCC-CCCHHHHHHHHHHHHHCCEEEEECCCHHHEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 999898771-3756669999998751588999666323303178777664315120113323567750000265127999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CCC---HHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEE
Q ss_conf 0001112222233223453211110012334554320122-210---112100002688999988679707550464009
Q gi|254780432|r 257 LATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDG-FLE---NVINIAKILFEGLTAIKNRFPNMFLEVRGQGLL 332 (392)
Q Consensus 257 ~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~-l~~---~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~ 332 (392)
++.+++++.+.......+++.+...-.++.+.|+ +.+ +.+ ..+++-+.+.+.|++ . . +.-+...|.+
T Consensus 248 v~p~~li~~~~~~~~~~~~~~~~~~Q~a~~~~l~---~~~~~~~~~~~y~~rrd~l~~~L~~----~-~-~~~~~p~G~f 318 (384)
T PRK12414 248 LAPAELMDEIRKVHQFMVFSADTPMQYAFAEALA---RPASYLGLSAFYQRKRDLLARELAD----S-R-FELLPSEGSF 318 (384)
T ss_pred EECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHH----C-C-CEEECCCCEE
T ss_conf 8489999999999975657867899999999982---9824999999999999999997675----6-9-8787898079
Q ss_pred EEE-EEC----CCHHHHHH-HHHHCCEEEEEC------C--CCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 998-724----99899999-999689899626------8--98899558986889999999999999
Q gi|254780432|r 333 IGL-KTV----FSPALLAA-KFRDECLLTAPS------S--DNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 333 ~~i-e~~----~~~~~~~~-~l~~~Gll~~~~------~--~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
+-+ .+. ..+..++. .+.+.||.+.|. + .+.|||+ |..++++|.+++++|.+
T Consensus 319 y~~~~~~~~~~~~d~~~~~~ll~e~gV~vvPG~~Fg~~g~~~g~iRls--fa~~~e~l~eg~~RL~~ 383 (384)
T PRK12414 319 FMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYADGTDTGVIRLS--FSKDDATLVEGARRLCS 383 (384)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHC
T ss_conf 999976878999999999999985999998263217999989989999--67999999999999703
No 178
>PRK09265 aminotransferase AlaT; Validated
Probab=99.52 E-value=2e-12 Score=101.64 Aligned_cols=337 Identities=18% Similarity=0.206 Sum_probs=186.7
Q ss_pred CCCCEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCH
Q ss_conf 79976464102267435787-8999999999999731-450687578189999986520101----33312356555403
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGH-SHPELVAILKSQSEKL-WHVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESV 102 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~-~~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~ 102 (392)
..|++.|++.-|-= ..++. ..+.|++|+.+++.+. .+++.....+.+...|+.+.+..+ .+.++.++++++|.
T Consensus 30 ~~G~~vi~l~iG~P-~~~df~tP~~i~~a~~~a~~~~~~Yt~~~G~~eLReaIA~~~~~~~~~~~~p~~I~vT~Ga~~al 108 (404)
T PRK09265 30 EEGHKILKLNIGNP-APFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELI 108 (404)
T ss_pred HCCCCCEECCCCCC-CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEECCCHHHHH
T ss_conf 76997358779799-98899998999999998744489989888889999999999997569998889978758889999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 56777665432001347860023435465654321234553211347999864333222100268875410123322223
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI 182 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~ 182 (392)
..+++..- .+|- .||..+-+|=..........+.+.+. +. ....-...|++++++.+.+++-++++
T Consensus 109 ~~~~~all-------~pGD-eVlvp~P~Yp~Y~~~~~l~g~~~v~~----~~--~~~~~f~~d~~~l~~~i~~~tk~iil 174 (404)
T PRK09265 109 VMAMQALL-------NNGD-EVLVPAPDYPLWTAAVSLSGGKPVHY----LC--DEEAGWFPDLDDIRSKITPRTKAIVI 174 (404)
T ss_pred HHHHHHHC-------CCCC-EEEEECCCCCHHHHHHHHCCCEEEEE----EC--CCCCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 99999964-------9989-89994688730689999769889998----52--63237788999999765745559998
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE--E---ECCCCCC-CCCCCCC
Q ss_conf -3322221124621012322110223457213101100344445553101112454530--2---1034444-4434432
Q gi|254780432|r 183 -EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDI--M---TIAKGMG-GGFPIGA 255 (392)
Q Consensus 183 -Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi--~---~~gK~l~-gG~P~sa 255 (392)
-|= .-.|. ..+++.+++|.++|++||+++|.|||...+---|.-|-+ ...+.||. + .+||..+ .|+=+|-
T Consensus 175 ~nP~-NPTG~-v~~~~~l~~l~~~a~~~~i~visDEiY~~l~~d~~~~~s-~~~l~~~~~~I~~~s~SK~~~m~G~RiG~ 251 (404)
T PRK09265 175 INPN-NPTGA-VYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAEHIS-IASLAPDLLCVTFNGLSKAYRVAGFRVGW 251 (404)
T ss_pred CCCC-CCCCC-CCCHHHHHHHHHHHHHCEEEEEECCHHHHHCCCCCCCCC-HHHCCCCCEEEEECCCCCCCCCCCCCEEE
T ss_conf 6897-95120-025046889999763155899850114552369998878-78819860599973677455677552799
Q ss_pred CCC--CCCCCCCC-CCCC-CCCC-CCCCCCCHHHHHHHHHHHHC-CCCCC---HHHHHCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf 100--01112222-2332-2345-32111100123345543201-22210---112100002688999988679707550
Q gi|254780432|r 256 CLA--TNEVAACM-NQGS-HGST-YGGNVLAMVLGEKVLNIIQS-DGFLE---NVINIAKILFEGLTAIKNRFPNMFLEV 326 (392)
Q Consensus 256 v~~--~~~i~~~~-~~~~-~~~T-~~gnpl~~aaa~a~L~~l~~-~~l~~---~~~~~g~~l~~~L~~l~~~~~~~v~~v 326 (392)
++. .+.....+ +... ..++ ...|-.+-.++.++|.-.+. +++.. +..+.-+.+.+.|+ +.|+ +.-+
T Consensus 252 ~v~~~p~~~~~~~i~~~~~l~~~~~c~~~~~Q~a~~~al~~~~~~~~~~~~~~rl~~~Rd~~~~~L~----~i~g-~~~~ 326 (404)
T PRK09265 252 MVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLN----AIPG-VSCV 326 (404)
T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH----HCCC-CEEC
T ss_conf 9952919999999999998854015688289999999973831299999999999999999999997----3899-5756
Q ss_pred CCCEEEEEE-EEC------CCHHHHHH-HHHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 464009998-724------99899999-999689899626------89889955898688999999999999999985
Q gi|254780432|r 327 RGQGLLIGL-KTV------FSPALLAA-KFRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 327 RG~Gl~~~i-e~~------~~~~~~~~-~l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+-.|.|..+ .+. .++..++. .+.+.||.+.|. +++.+|++ +..++++|.+++++|++.+.+.
T Consensus 327 ~P~Gafy~f~~l~~~~~~~~d~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~~vRls--f~~~~e~l~eal~Rl~~~l~~~ 402 (404)
T PRK09265 327 KPKGALYAFPKLDPKVYPIHDDEKFVLDLLLQEKVLLVQGTGFNWPEPDHFRIV--TLPRVDDLEDAIGRIGRFLSGY 402 (404)
T ss_pred CCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHH
T ss_conf 898389983087733179999999999999869999977850288999989999--7999999999999999999984
No 179
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.52 E-value=4.3e-12 Score=99.49 Aligned_cols=333 Identities=20% Similarity=0.214 Sum_probs=201.9
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHHHHHCC----CCC-CCCCCCCCCCHHH
Q ss_conf 764641022674357878999999999999731--450687578189999986520101----333-1235655540356
Q gi|254780432|r 32 IPFLDFASGIAVNSLGHSHPELVAILKSQSEKL--WHVSNLYQSTQQEIFANHLIHSTF----ADR-VFFTNSGAESVEC 104 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~--~~~~~~~~~~~~~~la~~L~~~~~----~~~-v~f~~SGseA~e~ 104 (392)
.+.||+..|-- .+ ..++.+.+++.+++... .++......+.+...++.+....+ .+. +..+++++||.-.
T Consensus 28 ~~vi~l~iG~P--d~-~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~ 104 (393)
T COG0436 28 EDVIDLSIGEP--DF-PTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFL 104 (393)
T ss_pred CCEEECCCCCC--CC-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHH
T ss_conf 86797568899--99-9869999999999865677778876779999999999887539988976628982667999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-C
Q ss_conf 777665432001347860023435465654321234553211347999864333222100268875410123322223-3
Q gi|254780432|r 105 AIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI-E 183 (392)
Q Consensus 105 Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~-E 183 (392)
++..-- .+|.. ||..+.+|-..........+.+..- |....- .-...|++.+++.+.+++-++++ -
T Consensus 105 a~~al~-------~pGDe-Vlip~P~Y~~y~~~~~~~gg~~v~v----~l~~~~-~~f~~d~~~l~~~i~~ktk~i~ln~ 171 (393)
T COG0436 105 AFLALL-------NPGDE-VLIPDPGYPSYEAAVKLAGGKPVPV----PLDEEE-NGFKPDLEDLEAAITPKTKAIILNS 171 (393)
T ss_pred HHHHHC-------CCCCE-EEECCCCCCCHHHHHHHCCCEEEEE----CCCCCC-CCCCCCHHHHHHHCCCCCEEEEEEC
T ss_conf 999971-------89988-9983899825599998779979872----166665-5874799999864774645999979
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC--C----EEECCCCCC-CCCCCCCC
Q ss_conf 3222211246210123221102234572131011003444455531011124545--3----021034444-44344321
Q gi|254780432|r 184 PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKP--D----IMTIAKGMG-GGFPIGAC 256 (392)
Q Consensus 184 pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~P--D----i~~~gK~l~-gG~P~sav 256 (392)
|=.=. |. .++++.++.+.++|++||+.+|.|||..+|.-.|..+.+ -..+.+ | +-.+||..+ .|.=+|-+
T Consensus 172 PnNPT-Ga-v~~~~~l~~i~~~a~~~~i~ii~DE~Y~~l~yd~~~~~s-~~~~~~~~~~~I~i~s~SK~~~mtG~RiG~~ 248 (393)
T COG0436 172 PNNPT-GA-VYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPS-ILELAGARDRTITINSFSKTYGMTGWRIGWV 248 (393)
T ss_pred CCCCC-CC-CCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCC-HHHCCCCCCEEEEEECCCCCCCCCCCCEEEE
T ss_conf 99966-77-889999999999999879299996364436268987777-5442787641899945633578836121899
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH----HHHCCHHHHHHHHHHHHCCCEEEEEC-CCE
Q ss_conf 000-111222223322345321111001233455432012221011----21000026889999886797075504-640
Q gi|254780432|r 257 LAT-NEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENV----INIAKILFEGLTAIKNRFPNMFLEVR-GQG 330 (392)
Q Consensus 257 ~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~----~~~g~~l~~~L~~l~~~~~~~v~~vR-G~G 330 (392)
++. +++.+.........+++.+..+-.+|.++|+.-++.+..+.. +++-+.+.+.|.+ .++ +.-+. -.|
T Consensus 249 v~~~~~l~~~~~~l~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rr~~l~~~l~~----~~g-~~~~~~p~G 323 (393)
T COG0436 249 VGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNE----IGG-LSVVKPPEG 323 (393)
T ss_pred EECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----CCC-EEEECCCCC
T ss_conf 727699999999999872368778999999999567663058999999999999999999975----588-665138886
Q ss_pred EEEEE-EEC--CCHHHHHHHHH-HCCEEEEEC-------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 09998-724--99899999999-689899626-------89889955898688999999999999999985
Q gi|254780432|r 331 LLIGL-KTV--FSPALLAAKFR-DECLLTAPS-------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 331 l~~~i-e~~--~~~~~~~~~l~-~~Gll~~~~-------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
-|..+ ++. .++..++.+++ +.||.+.|. +.+.+|++ +.-+++++.++++++.+.+.+.
T Consensus 324 a~y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis--~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 324 AFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLS--LATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCEEEECHHHHCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
T ss_conf 45997657998998999999998679999572574978779879999--7368999999999999998610
No 180
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.51 E-value=4.5e-12 Score=99.38 Aligned_cols=317 Identities=14% Similarity=0.194 Sum_probs=194.7
Q ss_pred EECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 641022674357878999999999999731450687578189999986520101--333123565554035677766543
Q gi|254780432|r 35 LDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRY 112 (392)
Q Consensus 35 iD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~ 112 (392)
+-+.++ =+.+|-+ |++++||++.+..+ +.|..+...+|-+.|.+..+ .+.+..+|+.+|..+..++..-
T Consensus 36 ikL~sN--ENP~gps-p~v~~Ai~~~~~~~----~rYPd~~~~~Lr~~lA~~~gv~~e~I~~gnGSdeli~~~~~a~~-- 106 (370)
T PRK08153 36 ARIGAN--ESGFGPS-PSVIAAMREAAAEV----WKYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYV-- 106 (370)
T ss_pred EEECCC--CCCCCCC-HHHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHHH--
T ss_conf 786899--9998989-99999999768645----67999778999999999868786679980888999999999985--
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC-CCCCCC-CCCCCCCCCCC
Q ss_conf 2001347860023435465654321234553211347999864333222100268875410-123322-22333222211
Q gi|254780432|r 113 HYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQI-SNDTAA-ILIEPIQGEGG 190 (392)
Q Consensus 113 ~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~-~~~iAa-vi~Epv~g~~G 190 (392)
.+|+. ++....+|---...+....+.. ..- |... .+.|++.+.+.. .+++.. +|..|=.=. |
T Consensus 107 -----~~g~~-vv~~~p~y~~y~~~~~~~g~~~-~~v---p~~~-----~~~d~~~~l~~~~~~~~klv~l~nPNNPT-G 170 (370)
T PRK08153 107 -----EPGDA-VVTSLGAYPTFNYHVAGFGGRL-VTV---PYRD-----DHEDLDALLDAARRENAPLVYLANPDNPM-G 170 (370)
T ss_pred -----CCCCC-CCCCCCCCCHHHHHHHHHCCEE-EEE---ECCC-----CCCCHHHHHHHCCCCCCCEEEECCCCCCC-C
T ss_conf -----59992-3437887516999999819669-999---4456-----54486999986037897389976895985-7
Q ss_pred CCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf 246210123221102234572131011003444455531011124545302---1034444-443443210001112222
Q gi|254780432|r 191 VRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNEVAACM 266 (392)
Q Consensus 191 ~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~~~~ 266 (392)
. ..+.+.+..+.+.|.+ ++++|+||-.--|..-..+- ....-.|.++ ||||..| .|+=+|..+++.++.+.+
T Consensus 171 ~-~~~~~~l~~l~~~~~~-~~lvVvDEAY~ef~~~~~~~--~l~~~~~NliVlRTfSK~ygLAGlRlGY~ia~~~li~~l 246 (370)
T PRK08153 171 S-WHPAADIVAFIEALPE-TTLLVLDEAYCETAPASAAP--PIDPDDPNVIRMRTFSKAYGLAGARVGYAIGTPGTIKAF 246 (370)
T ss_pred C-CCCHHHHHHHHHHCCC-CCEEEEEHHHHHHCCCCCHH--HHHHCCCCEEEEEECCHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf 7-6786889999984777-73896215356435642177--887439988999826220378887432013899999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC---HHH
Q ss_conf 23322345321111001233455432012221011210000268899998867970755046400999872499---899
Q gi|254780432|r 267 NQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS---PAL 343 (392)
Q Consensus 267 ~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~---~~~ 343 (392)
.... ..|+-|.++.+||.++|+ +.+++++..+.-..-++++.+..... ++ .-.-..+=++-+++..+ ...
T Consensus 247 ~k~r--~p~~vn~~aq~aa~aaL~---d~~~~~~~~~~i~~~R~~l~~~l~~~-g~-~~~pS~aNFil~~~~~~~~~a~~ 319 (370)
T PRK08153 247 DKVR--NHFGMNRIAQAAALAALK---DQAYLAEVVAKIAAARDRIAAIARAN-GL-TPLPSATNFVAIDCGRDGAFARA 319 (370)
T ss_pred HHHC--CCCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CC-EECCCCCCEEEEECCCCHHHHHH
T ss_conf 9864--898877999999999977---99999999999999999999999868-58-47999787799984897469999
Q ss_pred HHHHHHHCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999996898996268----9889955898688999999999999999985
Q gi|254780432|r 344 LAAKFRDECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 344 ~~~~l~~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+.+.|+++||+++..+ ++.||++ +=|.+|.++++++|.++|++.
T Consensus 320 l~~~L~~~GIlVR~~~~~~l~~~lRIs---iGt~een~~~l~aL~eiLk~~ 367 (370)
T PRK08153 320 VLDGLIARDIFVRMPGVAPLDRCIRVS---VGPEEELDLFAEALPEALKAA 367 (370)
T ss_pred HHHHHHHCCEEECCCCCCCCCCEEEEE---CCCHHHHHHHHHHHHHHHHHH
T ss_conf 999999789199449988899989997---399999999999999999986
No 181
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.51 E-value=1.5e-12 Score=102.45 Aligned_cols=320 Identities=17% Similarity=0.187 Sum_probs=189.4
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHH
Q ss_conf 99764641022674357878999999999999731450687578189999986520101--3331235655540356777
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIK 107 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aik 107 (392)
+-.++|||.++ .+.+|. .|.+.+|+.++++.+ +.|..+...+|.+.|.+..+ .+.+..+|+.+|.....++
T Consensus 18 ~~~~iidlssN--eNP~g~-p~~v~~ai~~~~~~~----~rYPd~~~~~Lr~~iA~~~gv~~~~I~vgnGs~Eli~~i~~ 90 (356)
T PRK08056 18 SPDQLLDFSAN--INPLGM-PVSVKRALIDNLDCI----ERYPDADYFHLHQALARHHQVPASWILAGNGETESIFTVAS 90 (356)
T ss_pred CHHHEEEECCC--CCCCCC-CHHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHH
T ss_conf 97667773799--999899-999999999747577----41998248999999999829888998875878999999998
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC-CCCCCCC
Q ss_conf 665432001347860023435465654321234553211347999864333222100268875410123322-2233322
Q gi|254780432|r 108 TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAA-ILIEPIQ 186 (392)
Q Consensus 108 lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAa-vi~Epv~ 186 (392)
.. .+++..| ...+|-.-...+ ...|-....- |..+. ..+...+.+.+.+..++.. +|.-|=-
T Consensus 91 ---~~-----~~~~~~i--~~Ptf~~Y~~~a-~~~g~~v~~~---~l~~~---~~~~~~~~~~~~~~~~~~lv~i~nPNN 153 (356)
T PRK08056 91 ---GL-----KPRRAMI--VTPGFAEYGRAL-AQVGCEIRRW---SLREA---DGWQLTDAILEALTPDLDCLFLCTPNN 153 (356)
T ss_pred ---HC-----CCCCEEE--ECCCHHHHHHHH-HHCCCEEEEE---ECCHH---HCCCCCHHHHHHCCCCCCEEEECCCCC
T ss_conf ---54-----8996699--788749999999-9859769998---67733---158976999973367888899818999
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCCC-CCCCCCCCCCCC-
Q ss_conf 2211246210123221102234572131011003444455531011124545302---10344444-434432100011-
Q gi|254780432|r 187 GEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMGG-GFPIGACLATNE- 261 (392)
Q Consensus 187 g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~g-G~P~sav~~~~~- 261 (392)
=. | ..++.+-++.+.+.|+++++++|+||...-|-.-..-+. ....--|.++ +|+|..|- |+-+|.+++.++
T Consensus 154 PT-G-~~~~~~~l~~l~~~~~~~~~~vvvDEAY~ef~~~~~s~~-~~~~~~~nlivlrTfSK~~glaGlRiGy~i~~~~~ 230 (356)
T PRK08056 154 PT-G-LLPERQLLQAIADRCKSLNINLILDEAFIDFIPHETGFI-PALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDA 230 (356)
T ss_pred CC-C-CCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCCCCHH-HHHHCCCCEEEEEECCHHCCCCCCCHHHHHCCCHH
T ss_conf 98-8-758999999999872404939997445576435861357-99845997899841416406852000111058899
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH----HHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEE
Q ss_conf 12222233223453211110012334554320122210112----10000268899998867970755046400999872
Q gi|254780432|r 262 VAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVI----NIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKT 337 (392)
Q Consensus 262 i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~----~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~ 337 (392)
+.+.++... ..|+-|.++.++|.++|+ +.++++... +-.+++.+.|++ .+++ .-.....-++-+++
T Consensus 231 ~i~~l~~~~--~p~~vn~~a~~aa~~al~---d~~~~~~~~~~i~~~r~~l~~~L~~----l~g~-~v~ps~aNFil~~~ 300 (356)
T PRK08056 231 AVARMRRQQ--MPWSINALAALAGEVALQ---DSAWQQATWHWLREEGARFYQALCQ----LPLL-TVYPGRANYLLLRC 300 (356)
T ss_pred HHHHHHHHC--CCCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHC----CCCC-EECCCCCCEEEEEC
T ss_conf 999999615--899811999999999836---9999999999999999999999865----8997-88989887899988
Q ss_pred CCCHHHHHHHHHHCCEEEEECC------CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 4998999999996898996268------988995589868899999999999999998
Q gi|254780432|r 338 VFSPALLAAKFRDECLLTAPSS------DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 338 ~~~~~~~~~~l~~~Gll~~~~~------~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
..+...+.+.|+++|++++.+. ++.+|++ +=|.+|-++++++|++.|..
T Consensus 301 ~~~~~~~~~~L~~~gIlVR~~~~f~gl~~~~lRis---igt~~en~~ll~aL~~iL~g 355 (356)
T PRK08056 301 EREDIDLQRRLLTQRILIRSCANYPGLDSRYYRVA---IRSAAQNERLLAALRNVLTG 355 (356)
T ss_pred CCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEE---CCCHHHHHHHHHHHHHHHCC
T ss_conf 99999999999968909976788899999989997---59999999999999999737
No 182
>PRK02948 cysteine desulfurase; Provisional
Probab=99.50 E-value=1.9e-12 Score=101.80 Aligned_cols=324 Identities=17% Similarity=0.202 Sum_probs=179.7
Q ss_pred EEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH-------HHHHHHHHHCC--CCCCCCCCCCCCCHHH
Q ss_conf 46410226743578789999999999997314506875781899-------99986520101--3331235655540356
Q gi|254780432|r 34 FLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQE-------IFANHLIHSTF--ADRVFFTNSGAESVEC 104 (392)
Q Consensus 34 yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~-------~la~~L~~~~~--~~~v~f~~SGseA~e~ 104 (392)
|+|-.+. + .-.|++++++.+.+...+. ++...|.... +.-+++.+..+ .+.+.|+.++||++-.
T Consensus 3 YlD~aAt---t---p~~~~v~~a~~~~~~~~~~-N~~s~h~~~~~a~~~~e~aR~~ia~~lga~~~~IvFTsg~Tes~nl 75 (381)
T PRK02948 3 YLDYAAT---T---PMSEEALQTYQKAASQYFG-NESSLHDIGGTASSLLQVCRKTFAEMIGGKEQGVYFTSGGTESNYL 75 (381)
T ss_pred ECCCCCC---C---CCCHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHH
T ss_conf 5476245---9---9999999999999987068-9851417999999999999999999809997808992887699999
Q ss_pred HHHHH-HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 77766-54320013478600234354656543212345532113479998643332221002688754101233222233
Q gi|254780432|r 105 AIKTA-RRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIE 183 (392)
Q Consensus 105 Aikla-r~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~E 183 (392)
|++-. +.+ ...++ .||+- .-=|-.-...+ ....+.++.-..-.++....-|++.+++.+.+++..|.+-
T Consensus 76 ai~~~~~~~----~~~g~-~ii~s-~~EH~sv~~~~----~~l~~~G~~v~~i~~d~~G~id~~~l~~~l~~~t~LV~v~ 145 (381)
T PRK02948 76 AIQSLLNAL----PQNKK-HIITT-PMEHASIHSYF----QSLESQGYTVTEIPVDKSGLIRLVDLERAITEDTVLASIQ 145 (381)
T ss_pred HHHHHHHHH----CCCCC-EEEEC-CCCCCHHHHHH----HHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEE
T ss_conf 999999970----57999-89974-64220078999----9999729989996778888769999997568994699997
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCCCCCCCCCCCC
Q ss_conf 3222211246210123221102234572131011003444455531011124545302103--44444434432100011
Q gi|254780432|r 184 PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA--KGMGGGFPIGACLATNE 261 (392)
Q Consensus 184 pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g--K~l~gG~P~sav~~~~~ 261 (392)
-+..+-|.+.| ++.+.++|+++|+++++|=+|. +|+.- .-.+. +..|+++++ | +.|-.=+|++..+++
T Consensus 146 ~asN~tG~i~p----i~~I~~~a~~~g~~~~vDa~Q~-~g~~~--idv~~--l~~D~~~fS~HK-~~GP~GiG~L~~~~~ 215 (381)
T PRK02948 146 HANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKLP--IDVFE--MGIDSLSVSAHK-IYGPKGVGAVYINPQ 215 (381)
T ss_pred CEEECCCCCCC----HHHHHHHHHHHCCEEEEEHHHH-CCCCC--CCCCC--CCCCEEEEEHHC-CCCCCCEEEEEECCC
T ss_conf 50206864775----8899999987098798465661-46516--65344--677625620000-458872599998789
Q ss_pred CC-CCCCC-CCC-----CCCCCCCCCCHHHHHHHHHHHHCC--CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE--
Q ss_conf 12-22223-322-----345321111001233455432012--22101121000026889999886797075504640--
Q gi|254780432|r 262 VA-ACMNQ-GSH-----GSTYGGNVLAMVLGEKVLNIIQSD--GFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG-- 330 (392)
Q Consensus 262 i~-~~~~~-~~~-----~~T~~gnpl~~aaa~a~L~~l~~~--~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G-- 330 (392)
+. ..+-+ +.+ .+|. |..++++..++++.+.+. ...++.+++.+++.++|.++. ..+ .+.|..
T Consensus 216 ~~~~~~~~g~~~e~~~~~GT~--nv~gi~~l~~A~~~~~~~~~~~~~~~~~L~~~l~~~l~~~~---~~~--~~~~~~~~ 288 (381)
T PRK02948 216 VRWKPVFPGTSHEKGFRPGTV--NVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLP---LPI--EVEGHSTS 288 (381)
T ss_pred CCCCCCCCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCE--EECCCCCC
T ss_conf 865556689887897667867--59999999999999986499999999999999999985479---974--65688634
Q ss_pred ---EEEEEEEC-CCHHHHHHHHHHCCEEEEEC-----------------C------CCEEEECCCCCCCHHHHHHHHHHH
Q ss_conf ---09998724-99899999999689899626-----------------8------988995589868899999999999
Q gi|254780432|r 331 ---LLIGLKTV-FSPALLAAKFRDECLLTAPS-----------------S------DNVVRILPPLTITAEEIHEGLERI 383 (392)
Q Consensus 331 ---l~~~ie~~-~~~~~~~~~l~~~Gll~~~~-----------------~------~~~irl~Ppl~it~~eid~~i~~l 383 (392)
-..++.+. .+...+...+-++|+.++.. + ...||++....-|++|||++++.|
T Consensus 289 ~~p~i~~~~~~~~~~~~~~~~l~~~gI~v~~GsaCa~~~~~~s~~l~a~g~~~~~a~~~vRvS~g~ynT~eeId~~i~al 368 (381)
T PRK02948 289 CLPHIIGVTIKGFEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHAL 368 (381)
T ss_pred CCCCEEEEECCCCCHHHHHHHCCCCCCEEECCHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 56867887338868899998542168189780452789887008999759987880925999747999999999999999
Q ss_pred HHHHHHHC
Q ss_conf 99999852
Q gi|254780432|r 384 ERTAIKLS 391 (392)
Q Consensus 384 ~~al~~L~ 391 (392)
++...+..
T Consensus 369 ~~i~~~f~ 376 (381)
T PRK02948 369 ETIGNQFY 376 (381)
T ss_pred HHHHHHHH
T ss_conf 99999982
No 183
>PRK09105 putative aminotransferase; Provisional
Probab=99.49 E-value=4.1e-12 Score=99.64 Aligned_cols=315 Identities=17% Similarity=0.158 Sum_probs=185.9
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHH
Q ss_conf 799764641022674357878999999999999731450687578189999986520101--333123565554035677
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAI 106 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Ai 106 (392)
.+|---|+. + =+.+|-+ |.+++|+++++... +.|..+...+|-+.|.+..+ .+.+.+.|+.+|..+..+
T Consensus 45 ~~g~ikL~s--N--ENP~Gps-p~v~~Ai~~~~~~~----~rYPd~~~~~Lr~~lA~~~gv~~~~I~~gnGSdE~i~~l~ 115 (374)
T PRK09105 45 AEGAVFLNF--N--ENPLGPS-AAARAAAARSAALS----GRYLFEMQDELRTLFAAQLGLPVDHLHAYAGSSEPLNYAV 115 (374)
T ss_pred CCCCEEEEC--C--CCCCCCC-HHHHHHHHHHHHHC----CCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
T ss_conf 999978458--8--8888989-99999999765245----7798986899999999997859024999369999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC-CCCCCCC
Q ss_conf 766543200134786002343546565432123455321134799986433322210026887541012332-2223332
Q gi|254780432|r 107 KTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTA-AILIEPI 185 (392)
Q Consensus 107 klar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iA-avi~Epv 185 (392)
+. + ..+|+. |+..+.+|---...+. ..|-.... -|..+++ ..|++++.+. ..+.. -+|..|=
T Consensus 116 ~a---f----~~~g~~-vv~~~Ptf~~Y~~~a~-~~g~~v~~---vpl~~d~----~~dl~~l~~~-~~~tklv~l~nPN 178 (374)
T PRK09105 116 LA---F----TSPEAG-LVTADPTYEAGWRAAD-AQGAKVIK---VPLRADG----AHDVRAMLAA-DPNAGLIYICNPN 178 (374)
T ss_pred HH---H----HCCCCE-EEECCCCHHHHHHHHH-HCCCEEEE---EEECCCC----CCCHHHHHHC-CCCCCEEEECCCC
T ss_conf 99---8----079986-8958887799999999-82977999---8616555----8586889735-7898789978899
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCC
Q ss_conf 22211246210123221102234572131011003444455531011124545302---1034444-4434432100011
Q gi|254780432|r 186 QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNE 261 (392)
Q Consensus 186 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~ 261 (392)
-= -|.. .+.+-++++.+. ...++++|+||.+.-|..- ....+...--|+++ ||||..| .|+=+|..+++.+
T Consensus 179 NP-TG~~-~~~~el~~~~~~-~~~~~lvvvDEAY~ef~~~--~s~~~l~~~~~NvivlRTfSKaygLAGlRvGY~ia~~~ 253 (374)
T PRK09105 179 NP-TGSV-TPRADIEWLLAH-KPAGSVVLVDEAYIHFSDA--PSVVDLVAQRKDVVVLRTFSKLYGMAGMRLGLAAARPD 253 (374)
T ss_pred CC-CCCC-CCHHHHHHHHHH-CCCCCEEEEEHHHHHHCCC--CCCHHHHHCCCCEEEEEHHHHHHCCCCCCCCHHHCCHH
T ss_conf 99-8765-799999999971-8988189986267662578--64325674289889982223762665100223108999
Q ss_pred CCCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEC
Q ss_conf 1222223322345321111---0012334554320122210112100002688999988679707550464009998724
Q gi|254780432|r 262 VAACMNQGSHGSTYGGNVL---AMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTV 338 (392)
Q Consensus 262 i~~~~~~~~~~~T~~gnpl---~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~ 338 (392)
+.+.+.+. ..|++ +.+||.++| ++++++++..+.-..-++++.+...+. ++ .-....+=++-++..
T Consensus 254 li~~l~~~------~~~~~~~~a~aaa~aaL---~d~~~~~~~~~~~~~~R~~l~~~L~~~-g~-~~~pS~aNFil~~~~ 322 (374)
T PRK09105 254 LLAKLARF------GGNPLPVPAAAAGLASL---RDPKLVPQRRAQNAAVREDTIAWLRKQ-GY-ACTPSQANCFMVDVK 322 (374)
T ss_pred HHHHHHHC------CCCCCCHHHHHHHHHHH---HCHHHHHHHHHHHHHHHHHHHHHHHHC-CC-EECCCCCCEEEEECC
T ss_conf 99999735------88988799999999996---299999999999999999999999978-39-589987857999559
Q ss_pred CCHHHHHHHHHHCCEEEEEC---CCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99899999999689899626---898899558986889999999999999999
Q gi|254780432|r 339 FSPALLAAKFRDECLLTAPS---SDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 339 ~~~~~~~~~l~~~Gll~~~~---~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
.+...+.+.|.++|++++.. .++.+|++. =|++|.++++++|+++++
T Consensus 323 ~~a~~~~~~L~~~gIlV~r~~~~~~~~lRISi---Gt~een~~fl~AL~evL~ 372 (374)
T PRK09105 323 RPAEVFADAMAKQGVFIGRSWPIWPNWVRVTV---GTEEEMAAFRSAFAKVMR 372 (374)
T ss_pred CCHHHHHHHHHHCCEEEECCCCCCCCEEEEEC---CCHHHHHHHHHHHHHHHC
T ss_conf 99999999999699799379998899799946---999999999999999866
No 184
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.49 E-value=3.6e-12 Score=100.04 Aligned_cols=319 Identities=14% Similarity=0.159 Sum_probs=191.9
Q ss_pred EECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH--------CCCCCCCCCCCCCCCHHHHH
Q ss_conf 6410226743578789999999999997314506875781899999865201--------01333123565554035677
Q gi|254780432|r 35 LDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHS--------TFADRVFFTNSGAESVECAI 106 (392)
Q Consensus 35 iD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~--------~~~~~v~f~~SGseA~e~Ai 106 (392)
|.+.++ -+.+|-+ |.+++|+.+.++......+.|..+...+|-+.|.+. ...+.++.+|+..|+.+..+
T Consensus 29 IkL~~N--ENP~gps-p~~~~ai~~a~~~~~~~~nrYPd~~~~~Lr~alA~~l~~~~~~gv~~e~Ii~gnGSdE~i~~i~ 105 (369)
T PRK03317 29 VRLNTN--ENPYPPS-PALVDDIARAVREAAAGLNRYPDRDAVALRTDLAAYLTAQTGVGLGVENVWAANGSNEILQQLL 105 (369)
T ss_pred EEEECC--CCCCCCC-HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHHHHH
T ss_conf 660078--8999999-9999999999997665247289974899999999875030267978778788268999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC-CCCC-CCCCC
Q ss_conf 766543200134786002343546565432123455321134799986433322210026887541012-3322-22333
Q gi|254780432|r 107 KTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISN-DTAA-ILIEP 184 (392)
Q Consensus 107 klar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~-~iAa-vi~Ep 184 (392)
+.- ..+|+ .++....+|-.-...+. ..+-.... -|..++| .-|++.+.+.+.+ +... +|..|
T Consensus 106 ~af-------~~pGd-~vl~~~Ptf~~Y~~~a~-~~g~~~v~---v~~~~df----~~d~d~l~~ai~~~~~klv~l~nP 169 (369)
T PRK03317 106 QAF-------GGPGR-SALGFVPSYSMHPIIAR-GTHTEWVA---APRAADF----GLDVDAAVAAIREHRPDVVFLTSP 169 (369)
T ss_pred HHH-------CCCCC-EEEECCCCHHHHHHHHH-HCCCEEEE---ECCCCCC----CCCHHHHHHHHHCCCCCEEEECCC
T ss_conf 998-------28999-89974786027999998-70977999---3678788----839999999863269858997589
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCC
Q ss_conf 222211246210123221102234572131011003444455531011124545302---1034444-443443210001
Q gi|254780432|r 185 IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATN 260 (392)
Q Consensus 185 v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~ 260 (392)
=.=. |.. .+.+-++.+.+.|.+ .++|+||...-|-.-+...+.+...--|.++ +|||+.| .|+=+|.+++++
T Consensus 170 NNPT-G~~-~~~~~l~~i~~~~~~--~~vvvDEAY~ef~~~~~~s~~~l~~~~~nlivlRTfSK~~gLAGlRlGy~ia~~ 245 (369)
T PRK03317 170 NNPT-GTA-LPLDDVEALLDAAPP--GIVVVDEAYAEFSRQGTPSALTLLPGYPRLVVSRTMSKAFAFAGGRLGYLAAAP 245 (369)
T ss_pred CCCC-CEE-CCHHHHHHHHHHCCC--CEEEECCCHHHHHCCCCCCHHHHHHCCCCEEEEECCHHHHCCCCHHHEEEECCH
T ss_conf 9987-712-378999999985887--779943877986156887667886137978999410586446653314100699
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH---HHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEE
Q ss_conf 1122222332234532111100123345543201222101---1210000268899998867970755046400999872
Q gi|254780432|r 261 EVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN---VINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKT 337 (392)
Q Consensus 261 ~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~---~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~ 337 (392)
++.+.+.... ..|.-|-++.++|.++|+-- +.+.+. +++.-+++.+.|+++ ++ .-.-..+=++-+..
T Consensus 246 ~~i~~l~~~~--~p~~vn~~a~~aa~aaL~d~--~~~~~~~~~i~~~R~~l~~~L~~l-----g~-~v~pS~aNFil~~~ 315 (369)
T PRK03317 246 AVIDALRLVR--LPYHLSAVTQAAARAALRHA--DETLASVAALRAERDRVVAWLREL-----GF-RVAPSDANFVLFGR 315 (369)
T ss_pred HHHHHHHHHC--CCCCCCHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHC-----CC-EECCCCCCEEEEEC
T ss_conf 9999999844--89886799999999997499--999999999999999999999978-----39-78889887799963
Q ss_pred CCCHHHHHHHHHHCCEEEEECC-CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 4998999999996898996268-988995589868899999999999999998
Q gi|254780432|r 338 VFSPALLAAKFRDECLLTAPSS-DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 338 ~~~~~~~~~~l~~~Gll~~~~~-~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
..+...+.++|+++|++++..+ ++.+|++ +=|.+|.+.+++.|++++.+
T Consensus 316 ~~~~~~~~~~L~~~gIlVR~~g~~~~lRis---igt~een~~~l~al~~il~~ 365 (369)
T PRK03317 316 FADAHAVWQRLLDRGVLIRDVGIPGWLRVT---IGTPEENDAFLDALAEVLAT 365 (369)
T ss_pred CCCHHHHHHHHHHCCCEECCCCCCCCEEEE---CCCHHHHHHHHHHHHHHHHC
T ss_conf 799999999999689689228998937996---19999999999999999722
No 185
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.47 E-value=2e-11 Score=95.15 Aligned_cols=330 Identities=15% Similarity=0.175 Sum_probs=192.1
Q ss_pred CCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCCC-CCCCHH----HHHHHHHHH-HHCC---CCCCCCCCCCCC
Q ss_conf 9764641022674357878999999999999731-45068-757818----999998652-0101---333123565554
Q gi|254780432|r 31 GIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVSN-LYQSTQ----QEIFANHLI-HSTF---ADRVFFTNSGAE 100 (392)
Q Consensus 31 G~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~~-~~~~~~----~~~la~~L~-~~~~---~~~v~f~~SGse 100 (392)
+--|+|... .+..+..+++++.+..... ..++. .+.... ..+-+++.+ +..+ .+.+.|+.+-||
T Consensus 22 ~~vylD~aa------~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~ 95 (405)
T COG0520 22 PLVYLDNAA------TSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTE 95 (405)
T ss_pred CCEECCCCC------CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHH
T ss_conf 847636765------66678899999999999740245755441279999999999999999819998772999598379
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 03567776654320013478600234354656543212345532113479998643332221002688754101233222
Q gi|254780432|r 101 SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI 180 (392)
Q Consensus 101 A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav 180 (392)
|.-...+. +... -..| ..||...--||....--..+.. +.+..-..-.+.....-+++.+++.+.+++-.|
T Consensus 96 aln~va~~---l~~~-~~~g-deIv~s~~EH~sn~~pw~~~~~----~~Ga~v~~i~~~~~g~~~~d~~~~~i~~~Tklv 166 (405)
T COG0520 96 ALNLVARG---LGRS-LKPG-DEIVVSDLEHHSNIVPWQELAK----RTGAKVRVIPLDDDGLLDLDALEKLITPKTKLV 166 (405)
T ss_pred HHHHHHHH---HHHH-HCCC-CEEEEECCCCCCCHHHHHHHHH----HCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEE
T ss_conf 99999997---0241-0689-9899804655200899999998----759689998418999728899986469994499
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC---CCCEEECC--CCCCCCCCCCC
Q ss_conf 23332222112462101232211022345721310110034444555310111245---45302103--44444434432
Q gi|254780432|r 181 LIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV---KPDIMTIA--KGMGGGFPIGA 255 (392)
Q Consensus 181 i~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi---~PDi~~~g--K~l~gG~P~sa 255 (392)
.+--++..-|...| ++.|.++|+++|+++++|=+|.- ++...++ -.|++++| |.|.|--.+|+
T Consensus 167 ais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~~--------~h~~idv~~l~~Df~afsgHKwl~gP~GiGv 234 (405)
T COG0520 167 ALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQAA--------GHLPIDVQELGCDFLAFSGHKWLLGPTGIGV 234 (405)
T ss_pred EEECCCCCCCCCCC----HHHHHHHHHHCCCEEEEECCCCC--------CCCCCCHHHCCCCEEEECCCCCCCCCCCEEE
T ss_conf 99664167554040----99999999984998999771334--------7566885561898999767432579985299
Q ss_pred CCCCCCCCCCCCCCCC------------CCCCC--------CC--CCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH
Q ss_conf 1000111222223322------------34532--------11--11001233455432012221011210000268899
Q gi|254780432|r 256 CLATNEVAACMNQGSH------------GSTYG--------GN--VLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLT 313 (392)
Q Consensus 256 v~~~~~i~~~~~~~~~------------~~T~~--------gn--pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~ 313 (392)
+.+++++.+.+.|... ..|+. |. ..+.....++++++++-. .+++.+..+.+.+.+.
T Consensus 235 Ly~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig-~~~i~~~e~~L~~~~~ 313 (405)
T COG0520 235 LYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIG-MEAIEAHERELTEYLL 313 (405)
T ss_pred EEECHHHHHHCCCCCCCCCCEEECCCCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_conf 998665584378977788724401445553015641531557843788986999999999857-9999999999999999
Q ss_pred HHHHHCCCE--EEEEC-CCEEEEEEEECC-CHHHHHHHHHHCCEEEEECCC------------CEEEECCCCCCCHHHHH
Q ss_conf 998867970--75504-640099987249-989999999968989962689------------88995589868899999
Q gi|254780432|r 314 AIKNRFPNM--FLEVR-GQGLLIGLKTVF-SPALLAAKFRDECLLTAPSSD------------NVVRILPPLTITAEEIH 377 (392)
Q Consensus 314 ~l~~~~~~~--v~~vR-G~Gl~~~ie~~~-~~~~~~~~l~~~Gll~~~~~~------------~~irl~Ppl~it~~eid 377 (392)
+..++.|++ +..-. .++-++++.+.. .+..+...+-++|+.++.... ..+|.+|.+.-|++|||
T Consensus 314 ~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid 393 (405)
T COG0520 314 EGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVD 393 (405)
T ss_pred HHHHCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCEEEEEECCCCHHHHH
T ss_conf 99854898499646634677469999789598999999986786998256443267875377775799974259999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780432|r 378 EGLERIERTAI 388 (392)
Q Consensus 378 ~~i~~l~~al~ 388 (392)
++++.|++...
T Consensus 394 ~l~~aL~~~~~ 404 (405)
T COG0520 394 RLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHHC
T ss_conf 99999998741
No 186
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.47 E-value=8.3e-12 Score=97.67 Aligned_cols=335 Identities=15% Similarity=0.165 Sum_probs=175.0
Q ss_pred EECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC-------CCCCCCCCHHHHHHHHHHHHHCC----CCCCCCC
Q ss_conf 967997646410226743578789999999999997314-------50687578189999986520101----3331235
Q gi|254780432|r 27 FSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW-------HVSNLYQSTQQEIFANHLIHSTF----ADRVFFT 95 (392)
Q Consensus 27 ~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~-------~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~ 95 (392)
...-|++.||+.-| ---+ -..+.|++|++++++... +++.....+.+.+.++++.+..+ .+.++.+
T Consensus 29 ~~~~~~dvI~L~iG--ePdf-~tP~~i~eA~~~a~~~~~~~~~~~gYt~~~G~~eLReAIa~~~~~~~g~~~~~~~I~vt 105 (409)
T PRK07590 29 EANPEAKIIRLGIG--DVTQ-PLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDIDAEEIFVS 105 (409)
T ss_pred HHCCCCCEEECCCC--CCCC-CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEC
T ss_conf 75899986678898--9789-99999999999999830126887858987474999999999999984899876886874
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHH-HHC
Q ss_conf 6555403567776654320013478600234354656543212345532-11347999864333222100268875-410
Q gi|254780432|r 96 NSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK-LQYLEGFGPKIEGFDQAKFCDLQSLK-NQI 173 (392)
Q Consensus 96 ~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~-~~~~~~~~p~~~~~~~~~~~d~~~l~-~~~ 173 (392)
+++.++.- ++ ++ .. .+| ..||..+-+|..-.... .+.|. +.... .+ ...++..+|...-..+. +..
T Consensus 106 ~Ga~~~l~-~i-~~-ll-----~pG-DeViip~P~Yp~Y~~~~-~laG~~~~~~~-~~-~~~~~~~~~~~~e~~f~~~~~ 173 (409)
T PRK07590 106 DGAKCDTG-NI-LD-IF-----GPD-NTIAVTDPVYPVYVDTN-VMAGRTGEANE-DG-RYEGIVYLPCTAENNFIPELP 173 (409)
T ss_pred CCHHHHHH-HH-HH-HH-----CCC-CEEEECCCCCCCHHHHH-HHCCCCCCCCC-CC-CCCCEEECCCCHHHCCCCCCC
T ss_conf 86799999-99-99-83-----999-98996688774469899-87488530135-66-556724655883435474356
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CC-CCCCCCCC----EEECCCC
Q ss_conf 123322223-33222211246210123221102234572131011003444455531-01-11245453----0210344
Q gi|254780432|r 174 SNDTAAILI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AY-EWANVKPD----IMTIAKG 246 (392)
Q Consensus 174 ~~~iAavi~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~-e~~gi~PD----i~~~gK~ 246 (392)
.+++-++++ -| ..-.| .+.+++.|++|.++|++||+++|.|||...|-.-+... +. +.-+. .| +-.+||.
T Consensus 174 ~~ktk~iilnsP-~NPTG-~V~s~eel~~i~~~a~~~~i~iisDEiY~~~~~~~~~p~si~~~~~~-~~~~I~i~s~SK~ 250 (409)
T PRK07590 174 SEKVDIIYLCFP-NNPTG-TVATKEQLKAWVDYAKANGSLILFDAAYEAFISDPSIPHSIYEIEGA-KECAIEFRSFSKN 250 (409)
T ss_pred CCCEEEEEECCC-CCCCC-CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCC-CCCEEEEEECHHH
T ss_conf 546029998489-89956-55799999999999987497899707620013689877577654655-0146897135264
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCC-----------CCCCCCCCCCC-CCHHHHHHHHHHHHC---CCCCCHHHHHCCHHHH
Q ss_conf 44-44344321000111222223-----------32234532111-100123345543201---2221011210000268
Q gi|254780432|r 247 MG-GGFPIGACLATNEVAACMNQ-----------GSHGSTYGGNV-LAMVLGEKVLNIIQS---DGFLENVINIAKILFE 310 (392)
Q Consensus 247 l~-gG~P~sav~~~~~i~~~~~~-----------~~~~~T~~gnp-l~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~ 310 (392)
.+ -|+=+|.+++.++++..... ..+..||+|-| ..-.||.+.+..-.+ +.+.+..+++-+.+.+
T Consensus 251 ~~mtGwRiG~~v~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~aa~a~l~~~~~~~~~~~~~~y~~rr~~~~~ 330 (409)
T PRK07590 251 AGFTGTRCAYTVVPKELKGKDSEGEIVDLNSLWNRRQSTKFNGVSYIVQRGAEAVYSPEGQAQIKELISYYMENAKIIRE 330 (409)
T ss_pred CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 07864436989757999988644469999999998750255786899999999996548789999999999999999999
Q ss_pred HHHHHHHHCCCEEEEECCCEEEE-EEEEC--CCHHHHHHHHH-HCCEEEEEC------CCCEEEECCCCCCCHHHHHHHH
Q ss_conf 89999886797075504640099-98724--99899999999-689899626------8988995589868899999999
Q gi|254780432|r 311 GLTAIKNRFPNMFLEVRGQGLLI-GLKTV--FSPALLAAKFR-DECLLTAPS------SDNVVRILPPLTITAEEIHEGL 380 (392)
Q Consensus 311 ~L~~l~~~~~~~v~~vRG~Gl~~-~ie~~--~~~~~~~~~l~-~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i 380 (392)
.|+++ + +.-..+.|.+. =+++. .++..++.++. +.||.+.|. +.+.+||+ +..++++|.+++
T Consensus 331 ~L~~~-----g-~~~~~p~gafY~w~~~~~~~~~~ef~~~Ll~e~~Vav~PG~~FG~~g~g~vRls--~a~~~e~l~ea~ 402 (409)
T PRK07590 331 GLEAA-----G-FTVYGGVNAPYIWVKTPDGLSSWDFFDKLLQEANVVGTPGSGFGPAGEGYFRLS--AFGSRENVLEAM 402 (409)
T ss_pred HHHHC-----C-CEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--ECCCHHHHHHHH
T ss_conf 99975-----9-767279972389888999989899999999869999968646589998969999--728999999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780432|r 381 ERIERTA 387 (392)
Q Consensus 381 ~~l~~al 387 (392)
++|++.|
T Consensus 403 ~Ri~~~L 409 (409)
T PRK07590 403 ERIKKLL 409 (409)
T ss_pred HHHHHHC
T ss_conf 9999859
No 187
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.46 E-value=9.2e-12 Score=97.38 Aligned_cols=324 Identities=22% Similarity=0.258 Sum_probs=187.4
Q ss_pred EEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC----CCCHHH--HHHHH-HHHHHCC--CCCCCCCCCCCCCHH
Q ss_conf 64641022674357878999999999999731450687----578189--99998-6520101--333123565554035
Q gi|254780432|r 33 PFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNL----YQSTQQ--EIFAN-HLIHSTF--ADRVFFTNSGAESVE 103 (392)
Q Consensus 33 ~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~----~~~~~~--~~la~-~L~~~~~--~~~v~f~~SGseA~e 103 (392)
-|+|... ++. -.|+++++|...++.. +.|+. +..... .+-|+ .+.+..+ ...++|+.+|||+|-
T Consensus 3 iYlD~~A---TTp---~~~~v~~~m~~~~~~~-fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnN 75 (386)
T COG1104 3 IYLDNAA---TTP---VDPEVLEAMLPYLTEV-FGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNN 75 (386)
T ss_pred CCCCCCC---CCC---CCHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
T ss_conf 2555435---688---9899999999998753-18961155757999999999999999983999780899569847777
Q ss_pred HHHHHH-HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 677766-54320013478600234354656543212345532113--479998643332221002688754101233222
Q gi|254780432|r 104 CAIKTA-RRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQY--LEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI 180 (392)
Q Consensus 104 ~Aikla-r~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~--~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav 180 (392)
.|||=+ ..+... ..++ .||+-.= =|= ++...-.+ +++|.-..-++...-.-|++.+++.+.++...|
T Consensus 76 laI~g~~~a~~~~--~~~~-HIIts~i-EH~------aVl~~~~~Le~~g~~Vtyl~v~~~G~v~~e~L~~al~~~T~LV 145 (386)
T COG1104 76 LAIKGAALAYRNA--QKGK-HIITSAI-EHP------AVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILV 145 (386)
T ss_pred HHHHHHHHHHHCC--CCCC-EEEECCC-CCH------HHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCCCEEE
T ss_conf 9998648764235--6898-5887554-349------9999999998669757996888897287999998638884599
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCC
Q ss_conf 23332222112462101232211022345721310110034444555310111245453021034444443-44321000
Q gi|254780432|r 181 LIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF-PIGACLAT 259 (392)
Q Consensus 181 i~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~-P~sav~~~ 259 (392)
-+.-+.++-|.+.| ++.+.++|++++++|.+|=||. +||.= .-.+.++ -|+++++--==+|. .+|++..+
T Consensus 146 Sim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gkip--i~~~~~~--vD~ls~SaHK~~GpkGiGaLyv~ 216 (386)
T COG1104 146 SIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKIP--IDLEELG--VDLLSFSAHKFGGPKGIGALYVR 216 (386)
T ss_pred EEEECCCCEEECCC----HHHHHHHHHHCCCEEEEEHHHH-CCCEE--CCCCCCC--CCEEEEEHHHCCCCCCEEEEEEC
T ss_conf 99850268201120----9999999997598179761332-57600--4602157--65687311213699842799987
Q ss_pred CCCCCCCCCCCCCCCCC-------CCCCCHHHHHHHHHHHHCC--CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE
Q ss_conf 11122222332234532-------1111001233455432012--22101121000026889999886797075504640
Q gi|254780432|r 260 NEVAACMNQGSHGSTYG-------GNVLAMVLGEKVLNIIQSD--GFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG 330 (392)
Q Consensus 260 ~~i~~~~~~~~~~~T~~-------gnpl~~aaa~a~L~~l~~~--~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G 330 (392)
+.+ .+.|..||+.+. -|..+.++.-+++++..++ ...+++..+-++|.++|.+.. |+++ +-|..
T Consensus 217 ~~~--~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~---p~~~--~~g~~ 289 (386)
T COG1104 217 PGV--RLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEII---PDVY--LNGDD 289 (386)
T ss_pred CCC--CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCEE--ECCCC
T ss_conf 998--7374460476789978887557999999999999998778889999999999999998509---9689--86885
Q ss_pred -------EEEEEEECCCHHHHHHHHHHCCEEEEE-----CC------------------CCEEEECCCCCCCHHHHHHHH
Q ss_conf -------099987249989999999968989962-----68------------------988995589868899999999
Q gi|254780432|r 331 -------LLIGLKTVFSPALLAAKFRDECLLTAP-----SS------------------DNVVRILPPLTITAEEIHEGL 380 (392)
Q Consensus 331 -------l~~~ie~~~~~~~~~~~l~~~Gll~~~-----~~------------------~~~irl~Ppl~it~~eid~~i 380 (392)
+-++|+.. +.+.+.-.|-.+|+.+.. .+ ...|||+=.-.-|++|+|.++
T Consensus 290 ~~rlP~~~~~~f~gv-~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~ 368 (386)
T COG1104 290 EPRLPNILNFSFPGV-EGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAA 368 (386)
T ss_pred CCCCCCEEEEEECCC-CHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCHHHHCCCEEEECCCCCCHHHHHHHH
T ss_conf 457898689996897-5789998610408687336434589987149999809996883724899737999899999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999985
Q gi|254780432|r 381 ERIERTAIKL 390 (392)
Q Consensus 381 ~~l~~al~~L 390 (392)
+.+.+.+.+|
T Consensus 369 ~~l~~~i~~l 378 (386)
T COG1104 369 EALKEIIKRL 378 (386)
T ss_pred HHHHHHHHHH
T ss_conf 9999999998
No 188
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.45 E-value=1.7e-11 Score=95.68 Aligned_cols=314 Identities=18% Similarity=0.204 Sum_probs=189.4
Q ss_pred CCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC--C-CCCCCCCCCCCHHHHHH
Q ss_conf 97646410226743578789999999999997314506875781899999865201013--3-31235655540356777
Q gi|254780432|r 31 GIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFA--D-RVFFTNSGAESVECAIK 107 (392)
Q Consensus 31 G~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~--~-~v~f~~SGseA~e~Aik 107 (392)
....|++.++ -+.+|-. |++.+|+.+.+.... -+.|..+...+|.+.|.+..+. + .+..+|+.+|+.+..++
T Consensus 25 ~~~~ikL~~N--Enp~g~~-~~v~~ai~~~~~~~~--lnrYPd~~~~~Lr~~lA~~~gv~~~~~Ii~GnGSdElI~~i~~ 99 (356)
T PRK04870 25 AAGFVKLDAM--ENPYPLP-AELQAELGERLAEVA--LNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLIAL 99 (356)
T ss_pred CCCCEEEECC--CCCCCCC-HHHHHHHHHHHHCCC--CCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHH
T ss_conf 9998883278--8999989-999999999751224--3779899899999999998687987769981679999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC-CCCCC-CCCCC
Q ss_conf 66543200134786002343546565432123455321134799986433322210026887541012-33222-23332
Q gi|254780432|r 108 TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISN-DTAAI-LIEPI 185 (392)
Q Consensus 108 lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~-~iAav-i~Epv 185 (392)
..- .+| ..|+....+|---...+.....+. ..- |..+++ .-|++++.+.+.+ +...| |.-|=
T Consensus 100 ~~~-------~pg-d~vl~~~Ptf~~Y~~~a~~~g~~~-~~v---pl~~d~----~~d~~~~~~~i~~~~~klv~i~nPN 163 (356)
T PRK04870 100 ACA-------KPG-AKVLAPVPGFVMYRMSAKFAGLEF-VGV---PLTADF----TLDLPAMLAAIAEHRPALVYLAYPN 163 (356)
T ss_pred HHH-------CCC-CEEEECCCCHHHHHHHHHHCCCEE-EEE---ECCCCC----CCCHHHHHHHHCCCCCCEEEECCCC
T ss_conf 981-------898-989976777668999999829879-998---468765----6212889987414687389976899
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCC
Q ss_conf 22211246210123221102234572131011003444455531011124545302---1034444-4434432100011
Q gi|254780432|r 186 QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNE 261 (392)
Q Consensus 186 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~ 261 (392)
.= -|.. .+.+ .|+++|++.+.++|+||-..-|.. .-+ .....-.|.++ +||| .| .|+-+|..+++++
T Consensus 164 NP-TG~~-~~~~---~l~~l~~~~~~lvVvDEAY~eF~~--~s~-~~~~~~~~nlivlRTfSK-~glaGlRvGy~ia~~~ 234 (356)
T PRK04870 164 NP-TGNL-FDDA---DVEAIIAAAPGLVVIDEAYQPFAG--RSW-LPRAAEFPNVLVMRTVSK-LGLAGLRLGYLAGHPA 234 (356)
T ss_pred CC-CCCC-CCHH---HHHHHHHCCCCEEEEECCCHHHCC--CCC-CHHHHCCCCEEEEECCCC-CCCCCCCEEEEEECHH
T ss_conf 97-6633-6878---899998506986552254075567--862-101203796899860541-0136566277750999
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH---CCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEC
Q ss_conf 1222223322345321111001233455432012221011210---0002688999988679707550464009998724
Q gi|254780432|r 262 VAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINI---AKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTV 338 (392)
Q Consensus 262 i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~---g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~ 338 (392)
+.+.+.... ..|.-|.++.++|.++|+-- +.+.+.++.+ -+++.+.|+++ +++ .-....+-++-+++.
T Consensus 235 ~i~~l~k~~--~p~~vn~~a~~aa~~aL~d~--~~~~~~~~~~~~~R~~l~~~L~~l----~g~-~v~pS~aNFil~~~~ 305 (356)
T PRK04870 235 WIAELDKVR--PPYNVNVLTQATALFALEHV--DVLDAQAAELRAERTRLAAALAAL----PGV-TVFPSAANFILVRVP 305 (356)
T ss_pred HHHHHHHHC--CCCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHC----CCC-EECCCCCEEEEEECC
T ss_conf 999997734--89873399999999997495--889999999999999999999836----997-888998808999889
Q ss_pred CCHHHHHHHHHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99899999999689899626------89889955898688999999999999999
Q gi|254780432|r 339 FSPALLAAKFRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 339 ~~~~~~~~~l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
+...+.+.|+++|++++.+ .++.+|++ +=|.+|.+++++.|+++|
T Consensus 306 -~a~~l~~~L~~~gIlVR~~~~~~~~~~~~lRIs---igt~een~~ll~aLk~~L 356 (356)
T PRK04870 306 -DAAAVFDGLKTRRVLVKNVSGMHPLLANCLRVT---VGSPEENAQFLAALKLAL 356 (356)
T ss_pred -CHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEE---CCCHHHHHHHHHHHHHHC
T ss_conf -999999999969909998898888899989998---399999999999999859
No 189
>PRK05839 hypothetical protein; Provisional
Probab=99.45 E-value=5.7e-12 Score=98.72 Aligned_cols=337 Identities=14% Similarity=0.081 Sum_probs=177.3
Q ss_pred EECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCHHHHHHHHHHHHHCC----CCCCCC
Q ss_conf 5010379967997646410226743578789999999999997314506-87578189999986520101----333123
Q gi|254780432|r 20 KGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQSTQQEIFANHLIHSTF----ADRVFF 94 (392)
Q Consensus 20 ~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~~~~~~la~~L~~~~~----~~~v~f 94 (392)
++.-..+.-..|++.||+.-|- -.+ -..|.|++|+++..+.....+ .....+.+.++++.+.+..+ .+.++.
T Consensus 12 ~~~~~~~~~~~~~dvi~L~iG~--pdf-~~P~~i~~A~~~~~~~~~~Y~~~~G~peLR~Aia~~~~~~~g~~v~~~~I~v 88 (376)
T PRK05839 12 RALLKEITPNKKGELLDLTIGE--PQF-ETPKFIQDALKNNAHLLNKYPKSAGEEELREAQRGFFKRRFNIELKENELIP 88 (376)
T ss_pred HHHHHHCCCCCCCCEEECCCCC--CCC-CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 9999741404899848796889--999-9899999999986444897799878299999999999998689998024998
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 56555403567776654320013478600234354656543212345532113479998643332221002688754101
Q gi|254780432|r 95 TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQIS 174 (392)
Q Consensus 95 ~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~ 174 (392)
++++++|.-....++-. ......|+..+-.|......+....++... -|....-.. ..|++..+ .
T Consensus 89 t~Ga~~al~~~~~~~l~------~~~~~~i~~p~P~y~~y~~~~~~~g~~~v~----v~l~~e~~~--~~~l~~~~---~ 153 (376)
T PRK05839 89 TFGTREVLFNFPQFVLF------DKQNPTIAYPNPFYQIYEGAAIASRAKSLY----MNLTKENDF--TPSLNEKE---L 153 (376)
T ss_pred CCCHHHHHHHHHHHHHC------CCCCCEEEECCCCCHHHHHHHHHCCCCCEE----ECCCCCCCC--CCCCCHHH---H
T ss_conf 17889999999999845------799988997898763258999861686324----246402588--86411876---5
Q ss_pred CCCCCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCC--CC---CEE---ECC
Q ss_conf 23322223-3322221124621012322110223457213101100344445553101-11245--45---302---103
Q gi|254780432|r 175 NDTAAILI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY-EWANV--KP---DIM---TIA 244 (392)
Q Consensus 175 ~~iAavi~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~-e~~gi--~P---Di~---~~g 244 (392)
.++-++++ -| +.-.|. ..+++-+++|.++|++||+++|.|||...+..-+..... +.... .. .++ .+|
T Consensus 154 ~~tk~iilnsP-~NPTG~-v~s~eel~~i~~la~~~~~~iisDEiY~~l~~~~~~~s~~~~~~~~~~~~~~~vi~i~s~S 231 (376)
T PRK05839 154 QEVDLVILNSP-NNPTGR-TLSLEELISWVKLALKYDFILINDECYSEIYENTPPPSLLEASILAGNESFKNVLVINSIS 231 (376)
T ss_pred HCCCEEEECCC-CCCCCC-CCCHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCH
T ss_conf 05899998899-899882-3639999999875147369999806828863799987688865651455325379992320
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEE
Q ss_conf 44444-43443210001112222233223453211110012334554320122210112100002688999988679707
Q gi|254780432|r 245 KGMGG-GFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMF 323 (392)
Q Consensus 245 K~l~g-G~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v 323 (392)
|..+. |+=+|.+++.+++++.+.......++ .+|..+. .++...+.+++.++ .+-+.++++++-+.+ ..+.
T Consensus 232 K~~~~~G~RiG~i~~~~~~i~~~~~~~~~~~~-~~~~~~q--~aa~~a~~~~~~~~---~~r~~~~~~~~~~~~-~l~~- 303 (376)
T PRK05839 232 KRSSAPGLRSGFIAGDSSILKKYKAYRTYLGC-ASPLPLQ--KAAAVAWLDDEHAE---FFRNIYAKNLKLARE-ILGI- 303 (376)
T ss_pred HHCCCCCCCEEEEECCHHHHHHHHHHHHHCCC-CCCHHHH--HHHHHHHCCCHHHH---HHHHHHHHHHHHHHH-HCCC-
T ss_conf 32014654069997899999999986564367-8519999--99999972966899---999999999999987-5398-
Q ss_pred EEECCCEEEEE-EEECCCHHHHHHHHH-HCCEEEEEC--------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 55046400999-872499899999999-689899626--------8988995589868899999999999999998
Q gi|254780432|r 324 LEVRGQGLLIG-LKTVFSPALLAAKFR-DECLLTAPS--------SDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 324 ~~vRG~Gl~~~-ie~~~~~~~~~~~l~-~~Gll~~~~--------~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
..-.|.|.. +++ .+...++++++ +.||.+.|. +.+.+||+ +..+++.|++++++|++-+.+
T Consensus 304 --~~P~g~fy~~~~~-~d~~~f~~~Ll~~~gV~v~PG~~FG~~~~g~~~vRls--~~~~~e~L~eal~Rl~~f~e~ 374 (376)
T PRK05839 304 --TIPPYTFYVWLPV-QNDENFTKKLYQNEGIKVLPGSYLGRNGIGKDYVRLA--LVYDTPKLKKALERIKTYREN 374 (376)
T ss_pred --CCCCEEEEEEEEC-CCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHH
T ss_conf --8898037998668-9989999999980999997740017999989969999--708899999999999999986
No 190
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.43 E-value=1.2e-11 Score=96.51 Aligned_cols=332 Identities=13% Similarity=0.164 Sum_probs=167.9
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC--CCCC-----CCHHHHHHHHHHHHH-CCCCCCCCCCCCCCC
Q ss_conf 99764641022674357878999999999999731450--6875-----781899999865201-013331235655540
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHV--SNLY-----QSTQQEIFANHLIHS-TFADRVFFTNSGAES 101 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~--~~~~-----~~~~~~~la~~L~~~-~~~~~v~f~~SGseA 101 (392)
.|++.||+.-| ---+ -..+.|++|+++.++.+... .+.| ..+.+..++++.-.. ...+.++.++++++|
T Consensus 31 ~~~dvI~L~iG--ePdf-~~P~~i~~a~~~ai~~~~~~~~~~gY~~~~G~~~LReaia~~~~~~~~~~d~I~vt~Ga~~~ 107 (402)
T TIGR03542 31 PSASVIRLGIG--DTTQ-PLPASVIEAFHEAVDELASEETYRGYGPEQGLPALREAIAENDYRGRISPEEIFISDGAKCD 107 (402)
T ss_pred CCCCEEECCCC--CCCC-CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEECCCCHHH
T ss_conf 89985589899--9899-98999999999999712246786777974064999999999975689988996777782999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC--CCCCCC
Q ss_conf 356777665432001347860023435465654321234553211347999864333222100268875410--123322
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQI--SNDTAA 179 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~--~~~iAa 179 (392)
.-+ + ++- . .+| ..||..+-+|......+. +.|........ ....++...+....+.+...+ ..++-+
T Consensus 108 l~~-l-~a~-l-----~pG-D~Vii~~P~y~~Y~~~~~-~~g~~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~ktk~ 176 (402)
T TIGR03542 108 IGR-L-QSI-F-----GSD-NTVAVQDPVYPAYVDTAV-MTGRAGFADDT-GQYRGIVYLPCTKENGFIPELPEERKIDI 176 (402)
T ss_pred HHH-H-HHH-H-----CCC-CEEEEECCCCCCHHHHHH-HCCCCCCCCCC-CCCCCEEECCCCHHHCCCCCCCCCCCCEE
T ss_conf 999-9-998-3-----999-989983888815799999-85995301356-65567256767624385722234557359
Q ss_pred CCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-------EEECCCCCC-CC
Q ss_conf 223-332222112462101232211022345721310110034444555310111245453-------021034444-44
Q gi|254780432|r 180 ILI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD-------IMTIAKGMG-GG 250 (392)
Q Consensus 180 vi~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD-------i~~~gK~l~-gG 250 (392)
+++ -| ..-.|. +.+++.|++|.++|++||+++|.|||..-|---+....+ -+. .|| +-.+||..+ .|
T Consensus 177 iiln~P-~NPTG~-v~s~eel~~i~~la~~~~i~iIsDEiY~~~~~~~~~~~s-~~~-~~~~~~~~I~i~S~SK~~~m~G 252 (402)
T TIGR03542 177 IYLCSP-NNPTGT-VLTKEQLKELVDYANAHGSLILFDAAYSAFISDPSIPHS-IYE-IEGAKECAIEINSFSKSLGFTG 252 (402)
T ss_pred EEECCC-CCCCCC-CCCHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCCCC-CEE-CCCCCCEEEECCCCCCCCCCCC
T ss_conf 998999-798875-689999999999987507079602228876168987620-111-3665213673167624027834
Q ss_pred CCCCCCCCCCCCCCCC-----C--CCCCCCCCCCCC-CCHHHHHHHHHHHH---CCCCCCHHHHHCCHHHHHHHHHHHHC
Q ss_conf 3443210001112222-----2--332234532111-10012334554320---12221011210000268899998867
Q gi|254780432|r 251 FPIGACLATNEVAACM-----N--QGSHGSTYGGNV-LAMVLGEKVLNIIQ---SDGFLENVINIAKILFEGLTAIKNRF 319 (392)
Q Consensus 251 ~P~sav~~~~~i~~~~-----~--~~~~~~T~~gnp-l~~aaa~a~L~~l~---~~~l~~~~~~~g~~l~~~L~~l~~~~ 319 (392)
+=+|.+++.+++.... + .....+++.+.+ ..-.|+.+.+.--. ..+..+..++.-+.+.+.|++
T Consensus 253 ~RiG~~i~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~l~~----- 327 (402)
T TIGR03542 253 VRLGWTVVPKELTYADGHSVIQDWERRLCTTFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILREALEA----- 327 (402)
T ss_pred CCHHHEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_conf 054021125877542279999999999876257755999999999973788599999999999999999998875-----
Q ss_pred CCEEEEECCCEEEE-EEEECC--CHHHHHHHHH-HCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 97075504640099-987249--9899999999-689899626------89889955898688999999999999999
Q gi|254780432|r 320 PNMFLEVRGQGLLI-GLKTVF--SPALLAAKFR-DECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 320 ~~~v~~vRG~Gl~~-~ie~~~--~~~~~~~~l~-~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
+++ .-..+.|.+. =+++.. ++..++.++. +.||.+.|. +++.+||+ +.-++++|.+++++|+++|
T Consensus 328 ~g~-~~~~~~ga~yl~~~~~~~~~~~~~~~~ll~e~~V~vvPG~~FG~~g~g~vRls--~a~~~e~l~ea~~Rl~~~L 402 (402)
T TIGR03542 328 AGF-KVYGGENAPYLWVKTPEGISSWDFFDFLLYQYHIVGTPGSGFGSSGEGFVRFS--AFGKRENIVAACERIKHAL 402 (402)
T ss_pred CCC-EEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEE--EECCHHHHHHHHHHHHHHC
T ss_conf 695-76079973489787899989899999999859999976447689998969999--7299999999999999759
No 191
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.42 E-value=1.1e-11 Score=96.78 Aligned_cols=326 Identities=16% Similarity=0.169 Sum_probs=186.6
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH----------CCCCCCCCCCCCC
Q ss_conf 997646410226743578789999999999997314506875781899999865201----------0133312356555
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHS----------TFADRVFFTNSGA 99 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~----------~~~~~v~f~~SGs 99 (392)
+.++.+=+.++ =+.+|- .|++.+|+.+.++.... .+.|..+...+|.+.|.+. ...+.+..+|+.+
T Consensus 23 ~~~~~ikL~~N--Enp~g~-p~~v~eai~~~~~~~~~-~~rYPd~~~~~Lr~aiA~~~~~~~~~~~~v~~e~I~vgnGs~ 98 (369)
T PRK02610 23 TAPALDRLDTN--ESPYDL-PTDLKQKLAWLYQQGIA-SNRYPDGGHLALKQAIAEYVNESTAGSWQITPANISVGNGSD 98 (369)
T ss_pred CCCCCEECCCC--CCCCCC-CHHHHHHHHHHHHCCHH-CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHH
T ss_conf 78782572398--989999-98999999999870312-065999987999999998857554555689815699848999
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC---
Q ss_conf 40356777665432001347860023435465654321234553211347999864333222100268875410123---
Q gi|254780432|r 100 ESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISND--- 176 (392)
Q Consensus 100 eA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~--- 176 (392)
|+.+..+.... .++...|+....+|---...+ .+.|-+...-+..+ .+| .-|++.+.+.+.+.
T Consensus 99 eli~~l~~a~~-------~~~~~~vl~~~Ptf~~Y~~~a-~~~g~~~~~v~~~~--~~f----~~d~~~~~~~i~~~~~~ 164 (369)
T PRK02610 99 ELIRSLLIATC-------LGGEGSILVAEPTFSMYGILA-QTLGIPVVRVGRDP--ENF----EIDLAAAQTAIEQTQNP 164 (369)
T ss_pred HHHHHHHHHHH-------CCCCCEEEECCCCHHHHHHHH-HHCCCEEEEECCCC--CCC----CCCHHHHHHHHHHCCCC
T ss_conf 99999999995-------489985996787655899999-97596279945764--366----56989999999855598
Q ss_pred -C-CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CC
Q ss_conf -3-2222333222211246210123221102234572131011003444455531011124545302---1034444-44
Q gi|254780432|r 177 -T-AAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GG 250 (392)
Q Consensus 177 -i-Aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG 250 (392)
+ ..+|.-|=.=. |.. .+.+-++.+.++++ ++++|+||...-|.+ .- ......-.|.++ +|||+.| .|
T Consensus 165 ~~klv~l~nPNNPT-G~~-~~~~~l~~l~~~~~--~~~vvvDEaY~ef~~--~s-~~~~~~~~~NlivlrTfSK~~glaG 237 (369)
T PRK02610 165 PVRVVFVVHPNSPT-GNP-LTAAELEWLRSLPE--DILVVIDEAYFEFSQ--TT-LVPELAQHPNWVILRTFSKAFRLAA 237 (369)
T ss_pred CCEEEEECCCCCCC-CCC-CCHHHHHHHHHCCC--CEEEEECCCEEECCC--CC-CCHHHHCCCCEEEEECCCHHHCCCC
T ss_conf 82399978996972-656-79999999984699--769983367602155--53-2102431787589852634406766
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE
Q ss_conf 34432100011122222332234532111100123345543201222101121000026889999886797075504640
Q gi|254780432|r 251 FPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG 330 (392)
Q Consensus 251 ~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G 330 (392)
+-+|.+++..++++.+.... ..|+-|.++.++|.++|+-- +.+.+.++++-+ -++.|.+...+.+++ .-.-..+
T Consensus 238 lRlGy~ia~~~~i~~l~~~~--~p~~v~~~a~~aa~~aL~~~--~~~~~~~~~~~~-eR~~l~~~L~~l~g~-~v~ps~a 311 (369)
T PRK02610 238 HRVGYAIGHPELIAVLEKVR--LPYNLPSFSQAAAQLALEHR--DELLAAIPEILQ-ERDKLYRALQELPQL-RVWPSAA 311 (369)
T ss_pred CCCEECCCCHHHHHHHHHHC--CCCCCCHHHHHHHHHHHCCH--HHHHHHHHHHHH-HHHHHHHHHHHCCCC-EECCCCC
T ss_conf 55131117999999999824--99884899999999997694--999999999999-999999999867997-7899986
Q ss_pred EEEEEEEC--CCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 09998724--9989999999968989962689889955898688999999999999999985
Q gi|254780432|r 331 LLIGLKTV--FSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 331 l~~~ie~~--~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
-++-+++. .+...+.+.|+++|++++... +.+|++ +=|++|-+++++.|+++|.||
T Consensus 312 NFil~~~~~~~~~~~~~~~L~~~Gi~VR~~~-~~lRIs---vgt~een~~~l~~Lk~~L~~~ 369 (369)
T PRK02610 312 NFLFLRLQGAQDLAALHQALKNQGTLVRHTA-GGLRIT---IGTPEENQRTLARLQAALTQL 369 (369)
T ss_pred EEEEEECCCCCCHHHHHHHHHCCCEEECCCC-CEEEEE---ECCHHHHHHHHHHHHHHHHHC
T ss_conf 0899988997569999999982990999899-908999---499999999999999999619
No 192
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.41 E-value=6.5e-11 Score=91.82 Aligned_cols=320 Identities=15% Similarity=0.195 Sum_probs=180.8
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHH
Q ss_conf 799764641022674357878999999999999731450687578189999986520101--333123565554035677
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAI 106 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Ai 106 (392)
..+.+.||+.++ -+.+|-. |.+++|+++.+..- .+.|..+...+|.+.|.+..+ .+.+..+++.+|+...++
T Consensus 21 ~~~~~ii~L~~N--EnP~gps-p~v~~a~~~~~~~~---~~~YPd~~~~~Lr~~iA~~~gv~~~~I~vg~Gs~e~i~~~~ 94 (353)
T PRK05387 21 PKLANLIKLNTN--ENPYPPS-PKVLEAIRAALGDD---LRLYPDPDATALRQAIAAYYGVSPEQVFVGNGSDEVLAHAF 94 (353)
T ss_pred CCCCCEEEEECC--CCCCCCC-HHHHHHHHHHHHHH---HCCCCCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHH
T ss_conf 799984794097--9999999-99999999967525---24799997899999999997868588998578999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 76654320013478600234354656543212345532113479998643332221002688754101233222233322
Q gi|254780432|r 107 KTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQ 186 (392)
Q Consensus 107 klar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~ 186 (392)
+... .+|+ .|+.-+.+|-.....+. +.|-.... -|..+++. -|++++. .+.-+-+|.-|=.
T Consensus 95 ~~~~-------~~gd-~Vl~p~Pty~~Y~~~a~-~~g~~~~~---vp~~~~~~----~~~~~~~---~~~~~v~l~nPnN 155 (353)
T PRK05387 95 LAFF-------KHDR-PLLFPDITYSFYPVYAG-LYGIPYEE---VPLDDDFS----IDVEDYL---RPNGGIIFPNPNA 155 (353)
T ss_pred HHHH-------CCCC-EEEECCCCCHHHHHHHH-HCCCEEEE---EECCCCCC----CCHHHHH---CCCCEEEEECCCC
T ss_conf 9961-------8998-66407877036999999-80954899---50564345----7999972---6367699848999
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCC
Q ss_conf 2211246210123221102234572131011003444455531011124545302---1034444-44344321000111
Q gi|254780432|r 187 GEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNEV 262 (392)
Q Consensus 187 g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i 262 (392)
= .|.. .+.+-+..+.+ +..++++|+||...-|+.- . ......--|.++ +|||..| .|+-+|.+++++++
T Consensus 156 P-TG~~-~~~~~l~~ll~--~~~~~~vvvDEAY~ef~~~-s--~~~l~~~~~nlivlrTfSK~~glaGlRlGy~ia~~~l 228 (353)
T PRK05387 156 P-TGIA-LPLADIERILA--ANPDSVVVIDEAYVDFGGE-S--AIPLIDRYPNLLVVQTLSKSRSLAGLRVGFAIGHPEL 228 (353)
T ss_pred C-CCCC-CCHHHHHHHHH--HCCCCEEEEECCHHHCCCC-C--HHHHHHCCCCEEEEEECCHHHCCCCCCCEEEECCHHH
T ss_conf 8-7886-89999999997--4899889960535641875-4--0245650787787630416308776623421069999
Q ss_pred CCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEC-CC
Q ss_conf 22222332-23453211110012334554320122210112100002688999988679707550464009998724-99
Q gi|254780432|r 263 AACMNQGS-HGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTV-FS 340 (392)
Q Consensus 263 ~~~~~~~~-~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~-~~ 340 (392)
++.+.... ....|.-|.++.++|.++|+ +++.+++..+.-..-++.|.+...+. ++ .-....+-++-+... .+
T Consensus 229 i~~l~~~~~~~~~~~v~~~a~~aa~aal~---d~~~~~~~~~~~~~~R~~l~~~L~~l-g~-~v~ps~anFvl~~~~~~~ 303 (353)
T PRK05387 229 IEALERVKNSFNSYPLDRLAQAGAIAAIE---DEAYFEETCAKVIATRERLVEELEAL-GF-EVLPSAANFVFARHPQHD 303 (353)
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHC-CC-EECCCCCCEEEEECCCCC
T ss_conf 99999998541677766999999999963---85999999999999999999999968-98-789898858999899999
Q ss_pred HHHHHHHHHHCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8999999996898996268----98899558986889999999999999999
Q gi|254780432|r 341 PALLAAKFRDECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 341 ~~~~~~~l~~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
...+.+.|+++|++++... ++.+|++ +=|.+|.++++++|+++++
T Consensus 304 a~~~~~~L~~~gI~VR~~~~~~l~~~iRis---vgt~een~~l~~al~~il~ 352 (353)
T PRK05387 304 AAALAAALRERGIIVRHFNKPRIDQFLRIT---IGTDEECEALVDALKEILA 352 (353)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCEEEEE---CCCHHHHHHHHHHHHHHHC
T ss_conf 999999998099399979989999989997---2999999999999999974
No 193
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.37 E-value=2.3e-11 Score=94.73 Aligned_cols=314 Identities=15% Similarity=0.199 Sum_probs=182.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCC------CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 878999999999999731450------68757818999998652010133312356555403567776654320013478
Q gi|254780432|r 47 GHSHPELVAILKSQSEKLWHV------SNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTN 120 (392)
Q Consensus 47 Gh~~p~i~~a~~~q~~~~~~~------~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~ 120 (392)
|-=.|+-.+|+.+.-+.++-. ..-...|+..+|.+.+++..+.|.++|++||+++|.+++--. .++|
T Consensus 11 g~l~~~a~~a~~~~gdgysvcd~c~~~ld~~~~P~i~efe~~aAeflG~d~A~~V~Ggt~Gnqa~i~t~-------c~~G 83 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSL-------CEKG 83 (361)
T ss_pred CCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH-------HCCC
T ss_conf 968999999999867864714520565334769988999999998719966999468520899999998-------4799
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHH----HHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6002343546565432123455321-13479998643332221002----688754101233222233322221124621
Q gi|254780432|r 121 KFRIVTFEGAFHGRTLATISAGGKL-QYLEGFGPKIEGFDQAKFCD----LQSLKNQISNDTAAILIEPIQGEGGVRKVP 195 (392)
Q Consensus 121 r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~p~~~~~~~~~~~d----~~~l~~~~~~~iAavi~Epv~g~~G~~~~~ 195 (392)
..||. .+..|=.+..+..++|-. .+-... .. +.+ .+...+ ++..+++..+.++.++++-+-+.-|..+.
T Consensus 84 -D~VIv-~~naH~S~~~a~~laG~~~~~v~~~-~~-~~~-~i~pe~~~~~Iee~~~e~g~~p~Lilit~~dy~yG~~~d- 157 (361)
T cd06452 84 -DWVVV-DGLAHYTSYVAAERAGLNVREVPNT-GH-PEY-HITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD- 157 (361)
T ss_pred -CEEEE-CCCCHHHHHHHHHHCCCEEEEECCC-CC-CCC-CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC-
T ss_conf -88985-5751288998888638469995677-68-566-518899999999999861899649999667877366313-
Q ss_pred HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE--ECCCCCCCCCCCCCCCCCCCCCCC-CCC----
Q ss_conf 0123221102234572131011003444455531011124545302--103444444344321000111222-223----
Q gi|254780432|r 196 EEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM--TIAKGMGGGFPIGACLATNEVAAC-MNQ---- 268 (392)
Q Consensus 196 ~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~--~~gK~l~gG~P~sav~~~~~i~~~-~~~---- 268 (392)
++++.++|++||+++++||-.+ .|+ +......+-.|++ +..|+|++=-|+|.+.++++..+. +..
T Consensus 158 ---l~~I~~iah~y~iPvlvD~A~~-~g~----lpv~a~~~gaD~v~~s~hK~~~a~~p~gvL~~~~~~~~~v~R~~~~~ 229 (361)
T cd06452 158 ---AKKIAKVCHEYGVPLLLNGAYT-VGR----MPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMF 229 (361)
T ss_pred ---HHHHHHHHHHCCCCEEECCCCC-CCC----CCCCHHHCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCC
T ss_conf ---7999999998599689715422-475----79875450796899865655534574378850506788887411011
Q ss_pred -----CCCCCCCCCCCC-CHHHHH-HHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEC---
Q ss_conf -----322345321111-001233-4554320122210112100002688999988679707550464009998724---
Q gi|254780432|r 269 -----GSHGSTYGGNVL-AMVLGE-KVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTV--- 338 (392)
Q Consensus 269 -----~~~~~T~~gnpl-~~aaa~-a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~--- 338 (392)
...+.|..+.|+ ++.|.. ++.+.+++ + +.--++.+++.++|+++..-. -...+.+..+++. ++..
T Consensus 230 ~~K~~~~Lg~t~~~~~~~~lmAS~~~~~~~v~~--~-~eev~~ar~~~~el~kI~G~~-~~ge~p~~~dl~~-~dt~~~~ 304 (361)
T cd06452 230 KIKEVELLGCTLRGAPLVTLMASFPHVKERVKR--W-DEEVEKARWFVAELEKIEGIK-QLGEKPKNHDLMF-FETPSFD 304 (361)
T ss_pred HHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHH--H-HHHHHHHHHHHHHHHCCCCHH-HCCCCCCCCCCEE-ECCCCCE
T ss_conf 045778746786551799998072999999987--7-789999999999984284531-2155777677456-1478632
Q ss_pred -------CCHHHHHHHHHHCCEEEE-ECCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf -------998999999996898996-2689889955898688999999999999999
Q gi|254780432|r 339 -------FSPALLAAKFRDECLLTA-PSSDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 339 -------~~~~~~~~~l~~~Gll~~-~~~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
...-.+.+.|.++||... +...+.+++. .+-+|+++++.++++|.+-.
T Consensus 305 ~~~~~~~~~G~~L~~~L~~rgI~~~~~g~t~~~~~~-tyG~t~e~i~~l~~a~keI~ 360 (361)
T cd06452 305 EIAKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLS-TYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EEEECCCCCCCHHHHHHHHCCCEEECCCCCCEEEEE-EECCCHHHHHHHHHHHHHHH
T ss_conf 441047865006999998769768716853379999-95168889999999999975
No 194
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.34 E-value=1.2e-11 Score=96.69 Aligned_cols=306 Identities=13% Similarity=0.153 Sum_probs=173.3
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC----CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 9999999999997314506875781899999865201013----331235655540356777665432001347860023
Q gi|254780432|r 50 HPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFA----DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIV 125 (392)
Q Consensus 50 ~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~----~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii 125 (392)
+|+|.+||.+. +.+...-| .....+..++|...... .-+.++-|||-|+|+|+.=. . .+| .|++
T Consensus 17 ~~~V~~Am~~~---~~~~~~eF-~~l~~~~~~~L~~l~~~~~~~~~v~~~gSGT~amEaai~nl------~-~~g-dkvL 84 (368)
T PRK13479 17 SRTTREAMLRD---WGSWDDDF-NAITASVRADLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL------V-PRD-GKVL 84 (368)
T ss_pred CHHHHHHHCCC---CCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC------C-CCC-CEEE
T ss_conf 99999974757---78987789-99999999999999578887079997168679999999615------4-799-9799
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHCC--CCCCCCC---CCCCCCCCCCCCCCHHH
Q ss_conf 4354656543212345532113479998643--332221002688754101--2332222---33322221124621012
Q gi|254780432|r 126 TFEGAFHGRTLATISAGGKLQYLEGFGPKIE--GFDQAKFCDLQSLKNQIS--NDTAAIL---IEPIQGEGGVRKVPEEF 198 (392)
Q Consensus 126 ~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~--~~~~~~~~d~~~l~~~~~--~~iAavi---~Epv~g~~G~~~~~~~~ 198 (392)
...++.-|.-+.-+.-. ++.... .+..-...|.+.+++.+. .++.+|. .|+ +.|+..|
T Consensus 85 v~~~G~FG~R~~~ia~~--------~g~~v~~l~~~~g~~~~~~~ve~~L~~~~~~~~v~~vH~ET---STGvln~---- 149 (368)
T PRK13479 85 VPDNGAYGARIAKIAEY--------LGIAHVVLDTGEDEPPDAAAVEAALAADPRITHVALVHCET---TTGILNP---- 149 (368)
T ss_pred EECCCHHHHHHHHHHHH--------HCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC---CCCCCCC----
T ss_conf 98179279999999998--------19975998789999889999999997499967899985067---7203167----
Q ss_pred HHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE--CCCCCCCCCC-CCCCCCCCCCCCCCCC---C---
Q ss_conf 32211022345721310110034444555310111245453021--0344444434-4321000111222223---3---
Q gi|254780432|r 199 LQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMT--IAKGMGGGFP-IGACLATNEVAACMNQ---G--- 269 (392)
Q Consensus 199 l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~--~gK~l~gG~P-~sav~~~~~i~~~~~~---~--- 269 (392)
++.+.++|++|++++|+|=|-+ +| |..+-.+.||| |+++ --|+|.+ .| +|.++.+++..+..+. .
T Consensus 150 l~~i~~~~~~~~~lliVDaVSs-~G--~~~~~~d~wgi--D~~~tgSQK~l~~-pPGLs~v~~s~~a~~~~~~~~~~~yl 223 (368)
T PRK13479 150 LDEIAAVVKRHGKRLIVDAMSS-FG--AIPIDIAELGI--DALISSANKCIEG-VPGFGFVIARRSALEACKGNSRSLAL 223 (368)
T ss_pred HHHHHHHHHHCCCEEEEECCCC-CC--CCEECCCCCCE--EEEEECCCCCCCC-CCCCEEEEECHHHHHHHHCCCCCCCC
T ss_conf 9999999985498699970200-15--72110244535--6999537651457-99710122089999987425887663
Q ss_pred ----------CCCCCCCCCCCCHHHH-HHHHHHHHCC-CCC---CHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEE
Q ss_conf ----------2234532111100123-3455432012-221---011210000268899998867970755046400999
Q gi|254780432|r 270 ----------SHGSTYGGNVLAMVLG-EKVLNIIQSD-GFL---ENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIG 334 (392)
Q Consensus 270 ----------~~~~T~~gnpl~~aaa-~a~L~~l~~~-~l~---~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ 334 (392)
..+.|..-.|+.+..| .++|+.|.++ .+. +|.++..+.++++++++--+ .++.+-.-.-.+.+
T Consensus 224 dl~~~~~~~~~~~~~~~Tp~v~li~aL~eaL~~i~~EGgl~~r~~r~~~~~~~~~~~~~~lGl~--~~~~~~~~s~tvta 301 (368)
T PRK13479 224 DLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLQLEEEGGVPARGARYARNCRTLVAGMRALGFE--PLLDDEIQSPIIVT 301 (368)
T ss_pred CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCHHHCCCCEEE
T ss_conf 6899999986449988688289999999999999983188999999999999999999973876--57894565986799
Q ss_pred EEECCC----HHHHHHHHHHCCEEEEECC---CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 872499----8999999996898996268---9889955898688999999999999999985
Q gi|254780432|r 335 LKTVFS----PALLAAKFRDECLLTAPSS---DNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 335 ie~~~~----~~~~~~~l~~~Gll~~~~~---~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+..+.+ ...+...++++|+.+.+.+ .+++|+.--=.+++++|..+++.|+++|.++
T Consensus 302 v~~P~~~~~d~~~~~~~l~~~g~~i~~G~~~~~~~fRIGhMG~~~~~di~~~l~ale~~L~~~ 364 (368)
T PRK13479 302 FHAPADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGAVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 976788563599999999977938968855778979887799999999999999999999985
No 195
>PRK08354 putative aminotransferase; Provisional
Probab=99.33 E-value=1.6e-10 Score=89.28 Aligned_cols=294 Identities=15% Similarity=0.150 Sum_probs=173.8
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 76464102267435787899999999999973145068757818999998652010133312356555403567776654
Q gi|254780432|r 32 IPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARR 111 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~ 111 (392)
.++|||.++ .+.+ ..|.+.+++.++++.... |. ...+|.+.+.+..+ +.+..+++++|+..... +.
T Consensus 8 ~~iidfssN--~NP~--~P~~~~~~~~~~~~~~~~----YP--~~~~L~~~la~~~g-~~i~~~~Gs~e~i~~l~---~~ 73 (312)
T PRK08354 8 EGLIDFSAS--VNPY--PPEWLDEMFERAVEISGR----YT--YYEWLEEEFSKLFG-EPITITAGITEALYLIG---IL 73 (312)
T ss_pred HHCEEECCC--CCCC--CCHHHHHHHHHHHHHHCC----CC--CHHHHHHHHHHHHC-CCEEECCCHHHHHHHHH---HH
T ss_conf 641660799--9999--972999999960564004----99--98999999988768-79699267999999999---99
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 32001347860023435465654321234553211347999864333222100268875410123322223332222112
Q gi|254780432|r 112 YHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGV 191 (392)
Q Consensus 112 ~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~ 191 (392)
.. .+ ++++....+|----..+. +.|.. +...+ .|.+.+++...+.-..+|..|=-=. |.
T Consensus 74 ~~-----~~-~~vl~~~Ptf~~Y~~~a~-~~g~~------------v~~~~-~d~~~l~~~~~~~~~v~l~nPNNPT-G~ 132 (312)
T PRK08354 74 AL-----RD-RKVIIPRHTYGEYERVAR-FFAAR------------IIKGP-NDPEKLEELVEKNSVVFFCNPNNPD-GK 132 (312)
T ss_pred HC-----CC-CEEEEECCCHHHHHHHHH-HCCCE------------EEECC-CCHHHHHHHHCCCCEEEEECCCCCC-CC
T ss_conf 76-----98-989993599999999999-86987------------87359-9989998630489889996898986-78
Q ss_pred CCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCCCCCC
Q ss_conf 46210123221102234572131011003444455531011124545302---1034444-4434432100011122222
Q gi|254780432|r 192 RKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNEVAACMN 267 (392)
Q Consensus 192 ~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~~~~~ 267 (392)
..+.+.++.+.+.|.+.++++|+||...-|..-.. ..++ |.++ +|+|..| .|+-+|.+++..++++.+.
T Consensus 133 -~~~~~~l~~l~~~~~~~~~~vvvDEAY~ef~~~~~--~~~~----~nlivlrS~SK~~glaGlRlGy~i~~~e~i~~~r 205 (312)
T PRK08354 133 -YYNFKELAPLIDAVEDKNVLLILDEAFIDFVKKAE--SPEG----ENIIKLRTFTKSYGVPGIRVGYVKGFEEAFRSVR 205 (312)
T ss_pred -CCCHHHHHHHHHHCCCCCCEEEEECHHHHHCCCCC--CCCC----CCEEEEEECCHHHCCCCHHHHHHHCCHHHHHHHC
T ss_conf -68989999999864777848997404777367633--4777----9889997462643574043436627899999863
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCHHHHHHH
Q ss_conf 33223453211110012334554320122210112100002688999988679707550464009998724998999999
Q gi|254780432|r 268 QGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSPALLAAK 347 (392)
Q Consensus 268 ~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~~~~~~ 347 (392)
..|+-|.++.+++.+.++ + +. +..++.-+.+.++.+.+.... .+...+-++-++. .+...+.+.
T Consensus 206 -----~p~~vn~~a~~~~~~~l~---d-~~-~~~~~~~~~~~~er~~l~~~~-----~~~s~aNFil~~~-~~a~~~~~~ 269 (312)
T PRK08354 206 -----MPWGIGSLGYAFLEFLLE---D-NF-EHLKKTLPLIWREKERFEKFL-----YVKSDANFFIKDV-GDAEKFVEF 269 (312)
T ss_pred -----CCCCCCHHHHHHHHHHHH---H-HH-HHHHHHHHHHHHHHHHHHCCC-----CCCCCCCEEEEEC-CCHHHHHHH
T ss_conf -----898874999999999988---1-69-999999999999999995623-----6899673899877-999999999
Q ss_pred HHHCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 996898996268----988995589868899999999999999
Q gi|254780432|r 348 FRDECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 348 l~~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
|+++|++++++. ++.+|++ +=|++|-+++++.|++=
T Consensus 270 L~~~gIlVR~~~~fgl~~~iRis---vg~~een~~li~aLke~ 309 (312)
T PRK08354 270 LKRNGILVRDCTSFGLPGYVRFS---VRDREENEKLLNALREW 309 (312)
T ss_pred HHHCCEEEEECCCCCCCCEEEEE---CCCHHHHHHHHHHHHHH
T ss_conf 98399199968999999989997---19999999999999988
No 196
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.33 E-value=2.1e-12 Score=101.57 Aligned_cols=161 Identities=21% Similarity=0.237 Sum_probs=101.8
Q ss_pred HHHHHHHHHHC--CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99998652010--1333123565554035677766543200134786002343546565432123455321134799986
Q gi|254780432|r 77 EIFANHLIHST--FADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPK 154 (392)
Q Consensus 77 ~~la~~L~~~~--~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~ 154 (392)
+++.++|.+.. +.+.+.|++|||+|++++++... ++| +.||+...+|++.........+-....-+..
T Consensus 3 ~e~e~~la~~~~~~~~~~i~~~sgt~A~~~~~~~l~-------~~g-d~vi~~~~~~~s~~~~~~~~~g~~~~~~~~~-- 72 (170)
T cd01494 3 EELEEKLARLLQPGNDKAVFVPSGTGANEAALLALL-------GPG-DEVIVDANGHGSRYWVAAELAGAKPVPVPVD-- 72 (170)
T ss_pred HHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHH-------CCC-CEEEECCCCHHHHHHHHHHHCCCEEEEECCC--
T ss_conf 999999999848998989995669999999999972-------799-9999826843756899998659877872347--
Q ss_pred CCCCCCCCCHHHHHHH-HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC-CCCCCC
Q ss_conf 4333222100268875-41012332222333222211246210123221102234572131011003444455-531011
Q gi|254780432|r 155 IEGFDQAKFCDLQSLK-NQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG-KLFAYE 232 (392)
Q Consensus 155 ~~~~~~~~~~d~~~l~-~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG-~~f~~e 232 (392)
.......+.+.++ ....+++..++++...+..|...+ ++++.++|++||+++|+|++++. |-.+ ......
T Consensus 73 ---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~----l~~I~~la~~~gi~livD~a~~~-g~~~~~~~~~~ 144 (170)
T cd01494 73 ---DAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAG-GASPAPGVLIP 144 (170)
T ss_pred ---CCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCC----HHHHHHHHHHCCCEEEEECCCHH-CCCCCCCCCCC
T ss_conf ---78755468999999855999636887740147873201----99997356207969999468432-16066666777
Q ss_pred CCCCCCCEEECC--CCCCCCCCCCCCCC
Q ss_conf 124545302103--44444434432100
Q gi|254780432|r 233 WANVKPDIMTIA--KGMGGGFPIGACLA 258 (392)
Q Consensus 233 ~~gi~PDi~~~g--K~l~gG~P~sav~~ 258 (392)
.+ -.|+++++ |.|++ -..|+++.
T Consensus 145 ~~--~~D~~~~s~hK~lg~-~g~g~l~~ 169 (170)
T cd01494 145 EG--GADVVTFSLHKNLGG-EGGGVVIV 169 (170)
T ss_pred CC--CCEEEEECCCCCCCC-CCEEEEEE
T ss_conf 78--985999898666789-85799998
No 197
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.32 E-value=3e-10 Score=87.50 Aligned_cols=336 Identities=17% Similarity=0.196 Sum_probs=186.5
Q ss_pred CCCEEEECHHHHHHHCCCCC-CHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHH--H--HHHCCCCCCCCCCCCCCCHH
Q ss_conf 99764641022674357878-999999999999731-450687578189999986--5--20101333123565554035
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHS-HPELVAILKSQSEKL-WHVSNLYQSTQQEIFANH--L--IHSTFADRVFFTNSGAESVE 103 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~-~p~i~~a~~~q~~~~-~~~~~~~~~~~~~~la~~--L--~~~~~~~~v~f~~SGseA~e 103 (392)
+|++.|-+.-| ....||.. .++|++.+.+.+..- .+...-..-+.+...... . +.....|.++..|+=||+++
T Consensus 144 ~g~~i~klnig-npa~fgf~~p~~~~~~~~~~~~~~~gy~~s~g~~~ar~a~~~~~q~~~~~~~~~~di~~gnGvSE~i~ 222 (518)
T PRK13355 144 NGTHILKLNIG-NPAPFGFRTPDEVVYDMAHQLPDTEGYSPSKGLFSARKAIMQYAQLKNIPNVDIDDIYTGNGVSELIN 222 (518)
T ss_pred CCCEEEEECCC-CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHH
T ss_conf 48816763478-98866888948999999973723458754557568999999999976999987403565477679999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC-C
Q ss_conf 677766543200134786002343546565432123455321134799986433322210026887541012332222-3
Q gi|254780432|r 104 CAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL-I 182 (392)
Q Consensus 104 ~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi-~ 182 (392)
.|++.-- .+| +.|+.=..+|-=+|-...-..|.+.+ +..+-..-..+|+|.+++.+.+++=+++ .
T Consensus 223 ~am~All-------n~G-DeVLiP~P~YPlyta~v~L~Gg~pV~------y~~dEe~~w~PDiedLe~kIT~kTKAIVIn 288 (518)
T PRK13355 223 LSMSALL-------DDG-DEVLVPSPDYPLWTACVNLAGGTAVH------YRCDEESEWYPDIDDIRSKITSKTKAIVII 288 (518)
T ss_pred HHHHHHC-------CCC-CEEEECCCCCCCHHHHHHHCCCEEEE------EEECCCCCCCCCHHHHHHHCCCCCEEEEEE
T ss_conf 9999836-------899-98982599997789998860987889------874522177889999985357155799996
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE-----CCCCCCC-CCCCCCC
Q ss_conf 332222112462101232211022345721310110034444555310111245453021-----0344444-4344321
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMT-----IAKGMGG-GFPIGAC 256 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~-----~gK~l~g-G~P~sav 256 (392)
-|=.=. |. +++++.|++|.++|++|++++|.|||.-.+-=-|.-|-+ -..+.||+.+ +||+..- |+=+|-+
T Consensus 289 NPNNPT-GA-VyS~E~LeeIaeiArehdLiIISDEIY~~LvYDg~~h~S-iasla~d~~~It~NG~SKsyaMtGWRiGwm 365 (518)
T PRK13355 289 NPNNPT-GA-LYPKEVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTS-IASLAPDLFCVTFSGLSKSHMIAGFRAGWM 365 (518)
T ss_pred CCCCCC-CC-CCCHHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCCCCC-HHHCCCCCEEEEECCCCCCEECCEEEEEEE
T ss_conf 898988-87-889999999999999859699962302210068986304-767088645999887766633220113665
Q ss_pred CC--CCCCCCC-CCCCC-C-CCCCCCCCCCHHHHHHHHHHHHCC-CCCC---HHHHHCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 00--0111222-22332-2-345321111001233455432012-2210---1121000026889999886797075504
Q gi|254780432|r 257 LA--TNEVAAC-MNQGS-H-GSTYGGNVLAMVLGEKVLNIIQSD-GFLE---NVINIAKILFEGLTAIKNRFPNMFLEVR 327 (392)
Q Consensus 257 ~~--~~~i~~~-~~~~~-~-~~T~~gnpl~~aaa~a~L~~l~~~-~l~~---~~~~~g~~l~~~L~~l~~~~~~~v~~vR 327 (392)
+. ..++... ++... . ..+...|..+-.++.++|.-.+.. ++.. +..+.-+++.++|++ -|+ +.-+.
T Consensus 366 v~sG~~~~a~~~Ie~l~~Las~~lcsnvpaQ~A~~aAL~g~qs~~d~~~~~~rl~erRdlv~e~Ln~----IpG-vscvk 440 (518)
T PRK13355 366 MLSGNKRHAKDYIEGLNMLANMRMCSNVPAQSVVQTALGGHQSVKDYTVPGGRLYDQRELVYDMLNA----IPG-ISAVK 440 (518)
T ss_pred EECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC----CCC-CEECC
T ss_conf 4248589999999999998604566368999999998628764899999999999999999999835----999-76589
Q ss_pred CCEEEEEEEEC-------CCHHHHHH-HHHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 64009998724-------99899999-999689899626------89889955898688999999999999999985
Q gi|254780432|r 328 GQGLLIGLKTV-------FSPALLAA-KFRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 328 G~Gl~~~ie~~-------~~~~~~~~-~l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
-.|.|..+.-. .++..++. .|.+++|++.|. +++.+|+. +.-+.++|.+++++|++-|..-
T Consensus 441 P~GAFYlFPkID~~~~~i~dDeeFal~LL~Ee~VlVVPGsaFG~~~pghfRIs--yaps~e~L~EA~~RI~~FL~~y 515 (518)
T PRK13355 441 PKAAFYIFPKIDVKIFNIHSDEQFALDLLHEKHILISHGGAFNWDKPDHFRVV--YLPRLGMLEETMDELDDFFSYY 515 (518)
T ss_pred CCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHH
T ss_conf 98158995541534489989999999999858999958754489998979999--2799999999999999999986
No 198
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level HMM (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.32 E-value=6.7e-11 Score=91.70 Aligned_cols=302 Identities=17% Similarity=0.243 Sum_probs=169.6
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CC--CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 999999999999731450687578189999986520101--33--31235655540356777665432001347860023
Q gi|254780432|r 50 HPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--AD--RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIV 125 (392)
Q Consensus 50 ~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~--~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii 125 (392)
+|+|.+|+.. .+.|-...|. ....+..++|.+... -+ -+++..|||.|+|+++.-. . ....+++
T Consensus 11 ~~~V~~am~~---~~~HRs~~F~-~i~~~~~~~L~~l~~~~~~~~v~~l~gsGt~a~Ea~~~nl------~--~~g~~vl 78 (355)
T TIGR03301 11 SATVRDAMLV---DWCHWDSEFN-DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSL------V--PRDGKLL 78 (355)
T ss_pred CHHHHHHHCC---CCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHC------C--CCCCEEE
T ss_conf 9999997187---7788988999-9999999989999589998479999165599999999852------3--6798799
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHCCC--CCCCCC---CCCCCCCCCCCCCCHHH
Q ss_conf 435465654321234553211347999864--33322210026887541012--332222---33322221124621012
Q gi|254780432|r 126 TFEGAFHGRTLATISAGGKLQYLEGFGPKI--EGFDQAKFCDLQSLKNQISN--DTAAIL---IEPIQGEGGVRKVPEEF 198 (392)
Q Consensus 126 ~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~--~~~~~~~~~d~~~l~~~~~~--~iAavi---~Epv~g~~G~~~~~~~~ 198 (392)
...++.-|.-..-+. +.++-.. -.+..-...+.+.+++.+.. ++.++. .|+.. |+..|
T Consensus 79 v~~~G~fg~r~~~~a--------~~~g~~~~~~~~~~g~~~~~~~v~~~l~~~~~~~~v~~~h~ETst---Gv~~~---- 143 (355)
T TIGR03301 79 VLINGAYGERLAKIC--------EYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTT---GILNP---- 143 (355)
T ss_pred EEECCHHHHHHHHHH--------HHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCC---CCCCC----
T ss_conf 995488999999999--------982996699736887789989999997257785489995012678---74175----
Q ss_pred HHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE--ECCCCCCCCCC-CCCCCCCCCCCCCCCCC------
Q ss_conf 3221102234572131011003444455531011124545302--10344444434-43210001112222233------
Q gi|254780432|r 199 LQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM--TIAKGMGGGFP-IGACLATNEVAACMNQG------ 269 (392)
Q Consensus 199 l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~--~~gK~l~gG~P-~sav~~~~~i~~~~~~~------ 269 (392)
++.+.++|++||+++|+|=|.+ +| +..+-.+.||+ |++ .--|+|.+ .| ++.++.+++..+.....
T Consensus 144 ~~~i~~~~~~~~~llvVDavSs-~g--~~p~d~~~~gv--D~~~~~sQK~l~~-ppGl~~v~~~~~~~~~~~~~~~~~y~ 217 (355)
T TIGR03301 144 LEAIAKVARSHGAVLIVDAMSS-FG--AIPIDIEELDV--DALIASANKCLEG-VPGFGFVIARRDLLEASAGNARSLYL 217 (355)
T ss_pred HHHHHHHHCCCCCEEEEECCCC-CC--CCCCCCCCCCE--EEEEECCCCCCCC-CCCEEEEEECHHHHHHCCCCCCCCCC
T ss_conf 3766566504796499974564-35--68642011565--8999536555678-88757888669999751379876663
Q ss_pred ----------CCCCCCCCCCCCHHHH-HHHHHHHHCCC----CCCHHHHHCCHHHHHHHHHHHHCCCEEE-EECCCEEEE
Q ss_conf ----------2234532111100123-34554320122----2101121000026889999886797075-504640099
Q gi|254780432|r 270 ----------SHGSTYGGNVLAMVLG-EKVLNIIQSDG----FLENVINIAKILFEGLTAIKNRFPNMFL-EVRGQGLLI 333 (392)
Q Consensus 270 ----------~~~~T~~gnpl~~aaa-~a~L~~l~~~~----l~~~~~~~g~~l~~~L~~l~~~~~~~v~-~vRG~Gl~~ 333 (392)
..++|+...|+....+ .++|+.|.++. ..+|.+++.+.+++.++++--+ .++. +.|. -...
T Consensus 218 dl~~~~~~~~~~g~~~~Tppv~~i~al~~al~~i~~eGGl~~~~~r~~~~a~~l~~~l~~lgl~--~~~~~~~~s-~~vt 294 (355)
T TIGR03301 218 DLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQ--PLLPERWQS-PIIV 294 (355)
T ss_pred CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCHHHCC-CCEE
T ss_conf 5899998863479878788549999999999999972379999999999999999999986994--358915649-8669
Q ss_pred EEEECC----CHHHHHHHHHHCCEEEEECC---CCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 987249----98999999996898996268---9889955898688999999999999999
Q gi|254780432|r 334 GLKTVF----SPALLAAKFRDECLLTAPSS---DNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 334 ~ie~~~----~~~~~~~~l~~~Gll~~~~~---~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
++..+. +...+.+.++++|+.+.+.+ .+.+|+.-==.++.++++.+++.|+++|
T Consensus 295 ~~~~p~~~~~d~~~~~~~l~~~g~~i~~G~~~~~~~fRig~mG~~~~~dv~~ll~~le~~L 355 (355)
T TIGR03301 295 SFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred EEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 9988998885799999999977907857876779989898189999999999999999769
No 199
>TIGR01141 hisC histidinol-phosphate aminotransferase; InterPro: IPR005861 The biosynthesis of histidine is a central metabolic process in organisms ranging from bacteria to yeast and plants. The seventh step in the synthesis of histidine within eubacteria is carried out by a pyridoxal-5'-phosphate (PLP)-dependent l-histidinol phosphate aminotransferase (HisC, 2.6.1.9 from EC). HisC is a dimeric enzyme with a mass of approximately 80 kDa. Like most PLP-dependent enzymes, each HisC monomer consists of two domains, a larger PLP-binding domain having an alpha/beta/alpha topology, and a smaller domain. An N-terminal arm contributes to the dimerization of the two monomers . ; GO: 0004400 histidinol-phosphate transaminase activity, 0000105 histidine biosynthetic process.
Probab=99.29 E-value=1.6e-10 Score=89.27 Aligned_cols=308 Identities=17% Similarity=0.204 Sum_probs=197.5
Q ss_pred HCCCCCCHHHHHHHHHHHH--HCCCCCCCCCCHHHHHHHHHHHHHCC--C--CCCCCC-CCCCCCHHHHHHHHHHHHHCC
Q ss_conf 3578789999999999997--31450687578189999986520101--3--331235-655540356777665432001
Q gi|254780432|r 44 NSLGHSHPELVAILKSQSE--KLWHVSNLYQSTQQEIFANHLIHSTF--A--DRVFFT-NSGAESVECAIKTARRYHYMA 116 (392)
Q Consensus 44 ~~lGh~~p~i~~a~~~q~~--~~~~~~~~~~~~~~~~la~~L~~~~~--~--~~v~f~-~SGseA~e~Aiklar~~~~~~ 116 (392)
+.+|- +|+++++++++++ ++ ++|+.+...+|-+.|.+..+ . +.+... |+.-|..+.-+|. -
T Consensus 38 nP~gp-~~~~~~~~~~~l~~a~l----~RYPdp~~~~L~~~lA~~~~~~v~~eqi~~GGnGsDe~I~~l~ra-------f 105 (377)
T TIGR01141 38 NPYGP-PEKAKEALRAELKEAKL----HRYPDPDPAELKQALAKYLGKKVDPEQILLGGNGSDEIIDLLIRA-------F 105 (377)
T ss_pred CCCCC-CHHHHHHHHHHHHHCCC----CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH-------H
T ss_conf 89988-88999999999850878----679898668999999998288987140378415606899999998-------5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 34786002343546565432123455--32113479998643332221002688754-1012332222-33322221124
Q gi|254780432|r 117 GKTNKFRIVTFEGAFHGRTLATISAG--GKLQYLEGFGPKIEGFDQAKFCDLQSLKN-QISNDTAAIL-IEPIQGEGGVR 192 (392)
Q Consensus 117 g~t~r~~ii~~~~~yHG~t~~a~s~s--~~~~~~~~~~p~~~~~~~~~~~d~~~l~~-~~~~~iAavi-~Epv~g~~G~~ 192 (392)
..+|+..|+...-+| +.-.++.+ |-....-+ ...+ .....|++.+.. ...+++--|+ ..|=-=. |-.
T Consensus 106 ~~PGk~~~l~~~Pty---~mY~~~A~~~g~~~~~~~---~~~~--~~~~~d~~~~~~a~~~~~~kLvF~c~PNNPT-G~~ 176 (377)
T TIGR01141 106 LEPGKDAVLVPPPTY---SMYEISAKIHGAEVKKVP---LDED--ADGQLDLEDILVAAIDEKPKLVFLCSPNNPT-GNL 176 (377)
T ss_pred CCCCCCEEEECCCCH---HHHHHHHHHCCCEEEEEE---CCCC--CCCCCCHHHHHHHHHHCCCCEEEEECCCCCC-CCC
T ss_conf 276654577617750---036765532071479974---0567--6675553789999862694089987886886-752
Q ss_pred CCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCC---CCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf 621012322110223457213101100344445---5531011124545302---1034444-44344321000111222
Q gi|254780432|r 193 KVPEEFLQQLRKICDDIDALLIFDEVQTGYGRT---GKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNEVAAC 265 (392)
Q Consensus 193 ~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRt---G~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~~~ 265 (392)
.+.+-+..+.+...+-+++.|+||=+.=|... +.+ .+...--|+++ ||||+.| .|+=+|..+++.+|.+.
T Consensus 177 -~~~~~i~~~l~~~~~g~~lVV~DEAY~EF~~~~~~~~~--~~ll~~ypNL~vlRTlSKafgLAG~R~Gy~~a~~~~i~~ 253 (377)
T TIGR01141 177 -LSREDIEAVLERTPEGDALVVVDEAYGEFSGEEDEPSV--LPLLAEYPNLIVLRTLSKAFGLAGLRVGYAIANAEIIDA 253 (377)
T ss_pred -CCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCC--CCHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf -69899999997176997389986423457888677653--231420798799810678877888889886069999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH---CCHHHHHHHHHHHHCCCEEE-EECCCEEEEEEEECC--
Q ss_conf 223322345321111001233455432012221011210---00026889999886797075-504640099987249--
Q gi|254780432|r 266 MNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINI---AKILFEGLTAIKNRFPNMFL-EVRGQGLLIGLKTVF-- 339 (392)
Q Consensus 266 ~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~---g~~l~~~L~~l~~~~~~~v~-~vRG~Gl~~~ie~~~-- 339 (392)
+..... -|.-+-+++++|.++|+--.-..+.+.++.+ =+++.++|++ ++. +. -....|=++-+.+..
T Consensus 254 l~kvr~--Pfn~~~la~~~A~aAL~~~~~~~~~~~~~~~~~~Re~l~~~L~~----~~~-~~~v~~S~aNF~L~~~~~~~ 326 (377)
T TIGR01141 254 LNKVRA--PFNLSRLAQAAAIAALRDDDLQFIEKTVEEINAERERLYDELKK----LEG-LEDVYPSDANFVLIRFPRGG 326 (377)
T ss_pred HHHCCC--CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----CCC-CCCEECCCCCEEEEECCCCC
T ss_conf 985168--87889799999998527146799999999999899999999871----430-00142577637999627767
Q ss_pred -CHHHHHHHHHHCCEEEEECC------CCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf -98999999996898996268------98899558986889999999999999
Q gi|254780432|r 340 -SPALLAAKFRDECLLTAPSS------DNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 340 -~~~~~~~~l~~~Gll~~~~~------~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
+...+.+.|.++||+++..+ ++.||++-- |++|.++++++|++
T Consensus 327 ~~a~~~~~~L~~~GiivR~~~~~~Gl~~~~lRITvG---t~eEn~~~l~~l~e 376 (377)
T TIGR01141 327 LDAEALFEALLEKGIIVRDLNSFPGLLPNCLRITVG---TREENDRFLEALRE 376 (377)
T ss_pred CCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEC---CHHHHHHHHHHHHC
T ss_conf 777999999986780686065578877762689728---87999999999850
No 200
>KOG1368 consensus
Probab=99.29 E-value=3.8e-11 Score=93.36 Aligned_cols=322 Identities=16% Similarity=0.164 Sum_probs=183.1
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 76464102267435787899999999999973145068757-81899999865201013331235655540356777665
Q gi|254780432|r 32 IPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQ-STQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTAR 110 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~-~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar 110 (392)
.+..|+-|---+ ---.++.+||.++.- .-..|. .+...+|.++..+.+|.+-.+|+.||+..|-.|++.-
T Consensus 21 ~~~vDLRSDTvT----~PTdeMr~am~eA~v----gDdVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~H- 91 (384)
T KOG1368 21 HRSVDLRSDTVT----VPTDEMRRAMAEASV----GDDVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVH- 91 (384)
T ss_pred EECCCCCCCCCC----CCHHHHHHHHHHCCC----CCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH-
T ss_conf 422102456436----875999999864534----75213678518899999999847541256326653107888787-
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC-C--C-----CCCCCC
Q ss_conf 4320013478600234354656543212345532113479998643332221002688754101-2--3-----322223
Q gi|254780432|r 111 RYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQIS-N--D-----TAAILI 182 (392)
Q Consensus 111 ~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~-~--~-----iAavi~ 182 (392)
.. .++-.-|+.....-|=+-.|.++.-+ +..+.+-....-.+-++++++..+. + + .--+.+
T Consensus 92 ---c~--~rg~eii~gd~~HI~~~E~gg~s~l~------gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIcl 160 (384)
T KOG1368 92 ---CH--QRGSEIIVGDRAHIHRYEQGGISQLA------GVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICL 160 (384)
T ss_pred ---HC--CCCCEEEECCCHHEEEHHCCCHHHHC------CCEEEEEEECCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEE
T ss_conf ---44--88855784361032121216721104------61467543179975569999876218999735897317986
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECC-------CCCCCCCCCCCCCCCCCCCCCCE--EECCCCCCCCCCC
Q ss_conf 33222211246210123221102234572131011-------00344445553101112454530--2103444444344
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDE-------VQTGYGRTGKLFAYEWANVKPDI--MTIAKGMGGGFPI 253 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE-------V~tG~GRtG~~f~~e~~gi~PDi--~~~gK~l~gG~P~ 253 (392)
|--+..-|-..+|-+|+.++.+||++||+.|-.|- |+.|.. ...+.-.-|- +|+||+||. |+
T Consensus 161 ENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~-------vk~i~~~fDSVsiCLSKglgA--PV 231 (384)
T KOG1368 161 ENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVP-------VKKICSAFDSVSICLSKGLGA--PV 231 (384)
T ss_pred ECCCCCCCCEEEEHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHCCCCC--CC
T ss_conf 213135686674199999999999615971533626665578771998-------999987632424355355788--74
Q ss_pred CCCC-CCCCCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCC-
Q ss_conf 3210-00111222223--3223453211110012334554320122210112100002688999988679707550464-
Q gi|254780432|r 254 GACL-ATNEVAACMNQ--GSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQ- 329 (392)
Q Consensus 254 sav~-~~~~i~~~~~~--~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~- 329 (392)
|-|+ ++++..+-..- ...|.-+.-.-+-||||+.+|+.-. .++....++.+.+.+.++.. +++-.+|--.
T Consensus 232 GSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~~--~~L~~dHk~A~~lAe~~~~~----~~i~v~v~a~e 305 (384)
T KOG1368 232 GSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDENV--PLLRADHKRAKELAEYINTP----EEIRVEVPAVE 305 (384)
T ss_pred CCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHCCC----CCEEEECCHHH
T ss_conf 0178752889999899999756861377799998898763122--77787799999999986466----66346322131
Q ss_pred EEEEEEEE---CCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 00999872---499899999999689899626898899558986889999999999999999
Q gi|254780432|r 330 GLLIGLKT---VFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 330 Gl~~~ie~---~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
-=|..+++ ..+.+.++..+.++|+++.+....++|+.-...+|+++++..+..+.+.+.
T Consensus 306 tNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~ 367 (384)
T KOG1368 306 TNIVNMVLCQARLTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSKKFL 367 (384)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf 23321110256678999998898778588614666248999984378999999999999998
No 201
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.29 E-value=1.7e-10 Score=89.06 Aligned_cols=312 Identities=19% Similarity=0.227 Sum_probs=166.4
Q ss_pred EECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 64102267435787899999999999973145068757818-99999865201013331235655540356777665432
Q gi|254780432|r 35 LDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQ-QEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYH 113 (392)
Q Consensus 35 iD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~-~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~ 113 (392)
+||.|..+ =-.+|++.+||.+.-. -....|...+ -.++..++.+.++...++|+.|||-||-.||...-
T Consensus 2 ~~f~SDn~----~g~~~~m~eam~~a~~---~~~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~--- 71 (342)
T COG2008 2 IDFRSDNV----AGPTPEMREALAAANA---VGDDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHC--- 71 (342)
T ss_pred CCCCCCCC----CCCCHHHHHHHHHCCC---CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHC---
T ss_conf 73555766----7879999999985524---5787778888999999999998577449992684388899999864---
Q ss_pred HCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC------CCCCCCCCCCCC
Q ss_conf 0013478600234354656543--21234553211347999864333222100268875410------123322223332
Q gi|254780432|r 114 YMAGKTNKFRIVTFEGAFHGRT--LATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQI------SNDTAAILIEPI 185 (392)
Q Consensus 114 ~~~g~t~r~~ii~~~~~yHG~t--~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~------~~~iAavi~Epv 185 (392)
+++.. +|+-..+ |=.+ .|+... .....|.+..-...-.-+++.++..+ ......++.|.-
T Consensus 72 ----~~~~~-vi~~~~a-Hi~~~E~Ga~~~------~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~ 139 (342)
T COG2008 72 ----QPGES-VICHETA-HIYTDECGAPEF------FGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENT 139 (342)
T ss_pred ----CCCCE-EEEECCC-CCEECCCCCHHH------HCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEC
T ss_conf ----89976-9985253-120235675888------73885430479877873999999763677765588750798613
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC-------CCCEEECCCCCCCCCCCCCCCC
Q ss_conf 222112462101232211022345721310110034444555310111245-------4530210344444434432100
Q gi|254780432|r 186 QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV-------KPDIMTIAKGMGGGFPIGACLA 258 (392)
Q Consensus 186 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi-------~PDi~~~gK~l~gG~P~sav~~ 258 (392)
..++|. ++|.++|+.+.++||+||+.|-.|=- |... +.-.+|+ --|.++++-+=++|.|.++++.
T Consensus 140 ~te~Gt-Vy~l~el~~i~~~~k~~~l~LHmDGA-----R~~n--A~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~ 211 (342)
T COG2008 140 ATEGGT-VYPLDELEAISAVCKEHGLPLHMDGA-----RLAN--ALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVF 211 (342)
T ss_pred CCCCCE-ECCHHHHHHHHHHHHHHCCCEEECHH-----HHHH--HHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEE
T ss_conf 677866-64899999999999980995440408-----8988--998739888998742889999131477521325897
Q ss_pred -CCCCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHCCCCC----CHHHHHCCHHHHHHHHHHHHCCCE--EEEECCC
Q ss_conf -0111222223--322345321111001233455432012221----011210000268899998867970--7550464
Q gi|254780432|r 259 -TNEVAACMNQ--GSHGSTYGGNVLAMVLGEKVLNIIQSDGFL----ENVINIAKILFEGLTAIKNRFPNM--FLEVRGQ 329 (392)
Q Consensus 259 -~~~i~~~~~~--~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~----~~~~~~g~~l~~~L~~l~~~~~~~--v~~vRG~ 329 (392)
+.+....+.- ..+|.=++-.-+-.++++..| +++++ .|...|.+.|.+++++. |++ ..++.-.
T Consensus 212 gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l----~~~~~~~~~~Han~mA~~La~~~~~~----~G~~~~~~~~tN 283 (342)
T COG2008 212 GNRDFAKRARRWRKRAGGLMRKARFLAAQGLYAL----EDDVWRLAADHANAMAARLAEGLEAK----PGVKLAFPVETN 283 (342)
T ss_pred CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHHHHHHHC----CCCEECCCCCCC
T ss_conf 3899999989999986562766548999999997----31588888788899999999765326----894343677662
Q ss_pred EEEEEEEECCC---HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 00999872499---89999999968989962689889955898688999999999999999
Q gi|254780432|r 330 GLLIGLKTVFS---PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 330 Gl~~~ie~~~~---~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
..+.- +... .......++..|++..+.+ ..+||..++.+|++++|++++.+.+.+
T Consensus 284 ~vf~~--l~~~~i~~l~~~~~~~~~~~~~~~~~-~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 284 MVFVR--LPESAIEALRLAGALFYRGVLIGAHG-EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred EEEEE--CCHHHHHHHHHHCHHHEEEEECCCCC-CEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 79997--77678899975152120012215777-558998502499999999999999964
No 202
>PRK07908 hypothetical protein; Provisional
Probab=99.28 E-value=2.5e-10 Score=88.03 Aligned_cols=309 Identities=17% Similarity=0.174 Sum_probs=166.1
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHH
Q ss_conf 9976464102267435787899999999999973145068757818-9999986520101--333123565554035677
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQ-QEIFANHLIHSTF--ADRVFFTNSGAESVECAI 106 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~-~~~la~~L~~~~~--~~~v~f~~SGseA~e~Ai 106 (392)
.+..+|||.++ .+.+|- .|.+.+|+++.++.+. .|..+. ..+|-+.+.+..+ .|.++.+|+.+|+...
T Consensus 19 ~~pgiidlS~n--~np~gp-p~~v~~al~~a~~~~~----~YP~~~~~~~Lr~aiA~~~gv~~d~I~~gnGs~E~i~~-- 89 (346)
T PRK07908 19 AAPGLLDFAVN--VRADRP-PEWLRERLAARLPDLA----RYPSTEDVRRARAAVAARHGRTRDEVLLLAGAAEGFAL-- 89 (346)
T ss_pred CCCCCEECCCC--CCCCCC-CHHHHHHHHHHCCCCC----CCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHH--
T ss_conf 89997788899--999897-9999999997555466----89398656999999999978588999874379999999--
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC-CCCCC
Q ss_conf 76654320013478600234354656543212345532113479998643332221002688754101233222-23332
Q gi|254780432|r 107 KTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI-LIEPI 185 (392)
Q Consensus 107 klar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav-i~Epv 185 (392)
+++. .+++..|+ ..+|--.. .+....|-+...- +..+++.. |. ..+.+++-.| +..|=
T Consensus 90 -l~~~------~~~~~vi~--~P~f~~y~-~~~~~~g~~v~~v---~l~~~~~l----d~----~ai~~~~~lv~l~nPn 148 (346)
T PRK07908 90 -LARL------LPRRAAVV--HPSFTEPE-AALRAAGIPVHRV---VLDPPFRL----DP----AAVPDDADLVVVGNPT 148 (346)
T ss_pred -HHHH------CCCCEEEE--CCCCHHHH-HHHHHCCCCEEEE---ECCCCCCC----CH----HHCCCCCCEEEECCCC
T ss_conf -9997------48996997--88857999-9999869925995---07986668----96----5767678989979997
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCCC-CCCCCCCCCCCC
Q ss_conf 22211246210123221102234572131011003444455531011124545302---10344444-434432100011
Q gi|254780432|r 186 QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMGG-GFPIGACLATNE 261 (392)
Q Consensus 186 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~g-G~P~sav~~~~~ 261 (392)
.=. |.. .+.+-+ .++|+ .+.++|+||...-|- .|.....- ..-.|+++ +|||..+- |+-+|.+++.++
T Consensus 149 NPT-G~~-~~~e~l---~~l~~-~~~~lVvDEaY~df~-~~~~~s~~-~~~~~nvivlrSfSK~yglaGlRiGy~va~~~ 220 (346)
T PRK07908 149 NPT-SVL-HPAEQL---LALRR-PGRILVVDEAFADAV-PGEPESLA-GDALPDLLVLRSLTKTWSLAGLRVGYALGAPE 220 (346)
T ss_pred CCC-CCC-CCHHHH---HHHHC-CCCEEEEEHHHHHCC-CCCCHHHH-HHCCCCEEEEECHHHHHCCCHHHHEEEECCHH
T ss_conf 987-786-789999---99853-498999951154325-89713444-42489889992435762577255132116999
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHH--HHHCC-CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE-CCCEEEEEEEE
Q ss_conf 12222233223453211110012334554--32012-2210112100002688999988679707550-46400999872
Q gi|254780432|r 262 VAACMNQGSHGSTYGGNVLAMVLGEKVLN--IIQSD-GFLENVINIAKILFEGLTAIKNRFPNMFLEV-RGQGLLIGLKT 337 (392)
Q Consensus 262 i~~~~~~~~~~~T~~gnpl~~aaa~a~L~--~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v-RG~Gl~~~ie~ 337 (392)
+++.+..... .|.-|.++.+++.+.+. .+.+. ...+++.+.-+++.+.|+++ + . .-+ ...+.++-+++
T Consensus 221 ~i~~l~~~~~--~~~v~~~a~~a~~a~~~~~~~~~~~~~~~~~~~~R~~l~~~L~~~----g-~-~~~~ps~anF~l~~~ 292 (346)
T PRK07908 221 LLARLTAQRA--HWPLGTLQLEAIAACCAPRAVAEAAADAERLAALRAEMVAGLRAV----G-A-EVVDPGAAPFVLVRV 292 (346)
T ss_pred HHHHHHHHCC--CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC----C-C-EECCCCCEEEEEEEC
T ss_conf 9999998277--888879999999999587568999999999999999999999977----8-8-653899508999868
Q ss_pred CCCHHHHHHHHHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 499899999999689899626------898899558986889999999999999999
Q gi|254780432|r 338 VFSPALLAAKFRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 338 ~~~~~~~~~~l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
. +...+.+.|+++||+++++ +++.+|++ +=|++|-++++++|++.++
T Consensus 293 ~-~a~~~~~~L~~~gIlVr~~~~f~gl~~~~iRia---v~~~een~rli~aL~~il~ 345 (346)
T PRK07908 293 P-DAELVRKRLRERGIAVRRGDTFPGLDPDYLRAA---VRPEWPVDRLVQAIAEILR 345 (346)
T ss_pred C-CHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEE---ECCHHHHHHHHHHHHHHHC
T ss_conf 9-999999999808959997887788798989998---3889999999999999974
No 203
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.27 E-value=7.5e-10 Score=84.85 Aligned_cols=318 Identities=21% Similarity=0.255 Sum_probs=195.8
Q ss_pred EEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC---CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 64641022674357878999999999999731450687578189999986520101---333123565554035677766
Q gi|254780432|r 33 PFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF---ADRVFFTNSGAESVECAIKTA 109 (392)
Q Consensus 33 ~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~---~~~v~f~~SGseA~e~Aikla 109 (392)
..+|+.++ -+.+|-. |++++++.+.++.+ +.|..+...++.+.+.+..+ .+.|...|+..|..+..++..
T Consensus 23 ~~i~LssN--enP~gp~-~~~~~~~~~~~~~~----~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~ 95 (356)
T COG0079 23 GIIKLSSN--ENPYGPP-PKVIEAIRAALDKL----NRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAF 95 (356)
T ss_pred CCEEECCC--CCCCCCC-HHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHH
T ss_conf 55462478--8999998-99999999878886----42999617999999999847998023998278489999999996
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC-CCCCCCCCC
Q ss_conf 5432001347860023435465654321234553211347999864333222100268875410123322-223332222
Q gi|254780432|r 110 RRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAA-ILIEPIQGE 188 (392)
Q Consensus 110 r~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAa-vi~Epv~g~ 188 (392)
.. +| ++|+....+|.-....+....... ..- |..+ -..|++.+...+.+++-. +|.-|=-=.
T Consensus 96 ~~-------~g-d~vl~~~Ptf~~Y~~~a~~~g~~~-~~v---~~~~-----~~~d~~~~~~~~~~~~~lv~i~nPNNPT 158 (356)
T COG0079 96 VE-------PG-DTVLIPEPTFSMYEIAAQLAGAEV-VKV---PLKE-----FRLDLDAILAAIRDKTKLVFLCNPNNPT 158 (356)
T ss_pred HC-------CC-CEEEECCCCHHHHHHHHHHCCCEE-EEE---CCCC-----CCCCHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf 17-------89-859981788078899999769869-994---4644-----4458899986514688889995995998
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-EE---ECCCCCC-CCCCCCCCCCCCCCC
Q ss_conf 112462101232211022345721310110034444555310111245453-02---1034444-443443210001112
Q gi|254780432|r 189 GGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPD-IM---TIAKGMG-GGFPIGACLATNEVA 263 (392)
Q Consensus 189 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PD-i~---~~gK~l~-gG~P~sav~~~~~i~ 263 (392)
|. ..+.+-++.+.+.|.+ +.++|+||-..-|.. .-+..... .|+ ++ ||||+.| .|+=+|.++++.++.
T Consensus 159 -G~-~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~---~~~~~l~~-~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i 231 (356)
T COG0079 159 -GT-LLPREELRALLEALPE-GGLVVIDEAYIEFSP---ESSLELLK-YPPNLIVLRTFSKAFGLAGLRVGYAIANPELI 231 (356)
T ss_pred -CC-CCCHHHHHHHHHHCCC-CCEEEEECCCCCCCC---CHHHHHHC-CCCCEEEEECCHHHHCCCHHCEEEHCCCHHHH
T ss_conf -88-7699999999983878-858999775310278---24545521-48988999546786402113334020899999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECC-CHH
Q ss_conf 2222332234532111100123345543201222101121000026889999886797075504640099987249-989
Q gi|254780432|r 264 ACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVF-SPA 342 (392)
Q Consensus 264 ~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~-~~~ 342 (392)
+.++.... -|.-|-++.++|.+.|+-- +.++...+.-..-+++|.+...+++ +..-.-...-++-+++.. ...
T Consensus 232 ~~l~~vr~--p~~v~~~a~~aa~aal~~~---~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~~~~~ 305 (356)
T COG0079 232 AALNKVRP--PFNVSSPALAAAIAALRDA---DYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPDAEAA 305 (356)
T ss_pred HHHHHHCC--CCCCCHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCEEEEECCCCCHH
T ss_conf 99998307--8888899999999860248---9999999999999999999997379-8701558887799975862199
Q ss_pred HHHHHHHHCCEEEEECC-----CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999996898996268-----9889955898688999999999999999985
Q gi|254780432|r 343 LLAAKFRDECLLTAPSS-----DNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 343 ~~~~~l~~~Gll~~~~~-----~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.+.+.+.++|++++... ++.+|++- =|++|-+++++.|.+.+.+.
T Consensus 306 ~l~~~L~~~giivR~~~~~~~~~~~lRitv---gt~een~~ll~AL~~~~~~~ 355 (356)
T COG0079 306 ALAEALLKKGILVRDCSSVGLLPGYLRITV---GTPEENDRLLAALREVLKGL 355 (356)
T ss_pred HHHHHHHHCCEEEEECCCCCCCCCEEEEEC---CCHHHHHHHHHHHHHHHHCC
T ss_conf 999999878989985777788887599965---98899999999999987315
No 204
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.23 E-value=8.1e-11 Score=91.20 Aligned_cols=303 Identities=15% Similarity=0.089 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99999999997314506875781899999865201013331235655540356777665432001347860023435465
Q gi|254780432|r 52 ELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAF 131 (392)
Q Consensus 52 ~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~y 131 (392)
+=++++.+.+++.+.+ ..+...+|++++++..+...+..++|||.|.+.|++..- -.....||+=.-.|
T Consensus 11 ~e~~~v~~~l~s~~~~----~G~~v~~fE~~~~~~~g~k~~v~~~sgT~AL~lal~al~-------~~~gdeVivp~~tf 79 (380)
T TIGR03588 11 DDIDAVVEVLKSDFLT----QGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALG-------VGPGDEVWTTPITF 79 (380)
T ss_pred HHHHHHHHHHHCCCCC----CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCC-------CCCCCEEEECCCCC
T ss_conf 9999999998479866----897699999999999785949997588999999999849-------99989999678530
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 654321234553211347999864333222100-2688754101----23322223332222112462101232211022
Q gi|254780432|r 132 HGRTLATISAGGKLQYLEGFGPKIEGFDQAKFC-DLQSLKNQIS----NDTAAILIEPIQGEGGVRKVPEEFLQQLRKIC 206 (392)
Q Consensus 132 HG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~-d~~~l~~~~~----~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc 206 (392)
-. |-.+-.+.+..|...+++...++ |.+.+++.+. .++-|||.=-+.|. +. + +..++++|
T Consensus 80 ~a--------t~~ai~~~Ga~pvf~Dvd~~t~~id~~~l~~~it~~~~~ktkaIi~vh~~G~----~~--d-~~~i~~ia 144 (380)
T TIGR03588 80 VA--------TANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVDFAGK----SV--D-MQAIAALA 144 (380)
T ss_pred HH--------HHHHHHHCCCEEEEEECCHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCE----EC--C-HHHHHHHH
T ss_conf 88--------6799998799689984410001489888777776436777259999489854----34--8-99999999
Q ss_pred CCCCCEEEECCCCCCCCCC--CCCCCCCCCCCCCCEEECC----CCCCCCCCCCCCCCCCC-CCCCCCCC----------
Q ss_conf 3457213101100344445--5531011124545302103----44444434432100011-12222233----------
Q gi|254780432|r 207 DDIDALLIFDEVQTGYGRT--GKLFAYEWANVKPDIMTIA----KGMGGGFPIGACLATNE-VAACMNQG---------- 269 (392)
Q Consensus 207 ~~~g~llI~DEV~tG~GRt--G~~f~~e~~gi~PDi~~~g----K~l~gG~P~sav~~~~~-i~~~~~~~---------- 269 (392)
++||+.+|-|=-|+ ||-+ |+.-+.-. --|+.|+| |.|+.|= =|+++++++ +.+.+...
T Consensus 145 ~~~~i~lIEDaA~a-~Ga~~~gk~~Gs~~---~gd~~~fSF~~~K~ittGe-GG~i~tnd~~l~~~~r~lr~~G~~~~~~ 219 (380)
T TIGR03588 145 KKHGLKIIEDASHA-LGAEYGGKPVGNCR---YADATVFSFHPVKIITTAE-GGAVTTNDEELAERMRLLRSHGITKDPL 219 (380)
T ss_pred HHCCCEEEEECCCH-HCCCCCCCCCCCCC---CCCEEEEECCCCCCCCCCC-CEEEEECCHHHHHHHHHHHHCCCCCCCC
T ss_conf 98698899988001-15775787656644---3524677335555577788-5399969999999999999769677731
Q ss_pred ---------------CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHC-CCEEEEECCCEEEE
Q ss_conf ---------------22345321111001233455432012221011210000268899998867-97075504640099
Q gi|254780432|r 270 ---------------SHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRF-PNMFLEVRGQGLLI 333 (392)
Q Consensus 270 ---------------~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~-~~~v~~vRG~Gl~~ 333 (392)
..|.-|..+.+.+|.+++-|+.++ +++++-+++.++..+.|+.+.... +......+..-.++
T Consensus 220 ~~~~~~~~~~~y~~~~~G~N~rmseiqAAig~~qL~~ld--~~~~~R~~ia~~Y~~~L~~~~~~~~~~~~~~~~~~~~~y 297 (380)
T TIGR03588 220 LFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKLD--RFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLY 297 (380)
T ss_pred HHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 001467887403663476665431241487688888899--999999999999999647899835674699983156899
Q ss_pred EEEEC----CCHHHHHHHHHHCCEEEE----ECC---------------------CCEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 98724----998999999996898996----268---------------------9889955898688999999999999
Q gi|254780432|r 334 GLKTV----FSPALLAAKFRDECLLTA----PSS---------------------DNVVRILPPLTITAEEIHEGLERIE 384 (392)
Q Consensus 334 ~ie~~----~~~~~~~~~l~~~Gll~~----~~~---------------------~~~irl~Ppl~it~~eid~~i~~l~ 384 (392)
-+-+. .+...+.+.|.++||-++ |.+ .+.|.+=-.-.+|++|++++++.|.
T Consensus 298 ~i~~~~~~~~~r~~l~~~L~~~gI~t~~~y~Plh~~p~~~~~~~~~~~p~ae~~~~~~l~LP~~~~Lt~~di~~I~~~Ik 377 (380)
T TIGR03588 298 PILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLR 377 (380)
T ss_pred EEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 99982667314999999999779985672304422998882788799879999984979897999989999999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780432|r 385 RTA 387 (392)
Q Consensus 385 ~al 387 (392)
++|
T Consensus 378 ~vL 380 (380)
T TIGR03588 378 KVL 380 (380)
T ss_pred HHC
T ss_conf 869
No 205
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.23 E-value=6.9e-10 Score=85.09 Aligned_cols=305 Identities=17% Similarity=0.159 Sum_probs=170.8
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC---CCCCCCCCCCCCCHHHHH
Q ss_conf 99764641022674357878999999999999731450687578189999986520101---333123565554035677
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF---ADRVFFTNSGAESVECAI 106 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~---~~~v~f~~SGseA~e~Ai 106 (392)
+-.++|||.++ .+.+|+--|.+.. +.+++++- + ...+.+.+....+ .+.++. ..||+..-..+
T Consensus 22 ~~~~ilDlSsN--iNPlG~P~~~~~a---~~~~ryPd-------~-~~~l~~~~a~~~g~~~~~~Vl~-gnGs~elI~~l 87 (339)
T PRK06959 22 PYDAWLDLSTG--INPHGYPVPPVPA---DAWRRLPD-------D-GDGLAACAARYYGAPDAAHVLP-VAGSQAAIRAL 87 (339)
T ss_pred CHHHEEECCCC--CCCCCCCCCHHHH---HHHHHCCC-------C-CHHHHHHHHHHCCCCCHHHEEE-CCCHHHHHHHH
T ss_conf 99895761688--8989999222249---99985899-------8-5899999999819996770996-65799999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC-CCCCCCC
Q ss_conf 766543200134786002343546565432123455321134799986433322210026887541012332-2223332
Q gi|254780432|r 107 KTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTA-AILIEPI 185 (392)
Q Consensus 107 klar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iA-avi~Epv 185 (392)
.+.+ .+++-.|. .-+|-... -+....| . ...+. +...+.+.+++. .||..|=
T Consensus 88 --~~~l-----~~~~v~i~--~ptfseY~-~a~~~~G-------~-------~v~~~---~~~~~~l~~~~~~v~l~nPN 140 (339)
T PRK06959 88 --PALL-----PRGRVGIA--ALAYSEYA-PAFARHG-------H-------RVVPL---DIAADTLPATLTHAIVVNPN 140 (339)
T ss_pred --HHHH-----CCCCEEEE--CCCHHHHH-HHHHHCC-------C-------EEEEC---CCCHHHCCCCCCEEEEECCC
T ss_conf --9982-----88868994--52036778-9999829-------8-------55513---73343373568989980580
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCC
Q ss_conf 22211246210123221102234572131011003444455531011124545302---1034444-4434432100011
Q gi|254780432|r 186 QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNE 261 (392)
Q Consensus 186 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~ 261 (392)
.=. |. ..+++-+..+.+.|.+.+.++|+||-..-|.-.-..-.. . -.|.++ +|+|..| .|+-+|.++++.+
T Consensus 141 NPT-G~-~~~~~~l~~~~~~~~~~~~~lvvDEAy~df~~~~s~~~~--~-~~~nlivlRS~sK~~gLaGlRlGy~~a~~~ 215 (339)
T PRK06959 141 NPT-AE-RLPAARLLRWHAQLAARGGTLIVDEAFADTGAHASLAAH--T-HRPGLVVLRSVGKFFGLAGVRAGFVLAAPA 215 (339)
T ss_pred CCC-CC-CCCHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCHHHHHH--C-CCCCEEEEEECCHHHCCCCCCEEEEECCHH
T ss_conf 710-38-889999999998554138889997344452665455764--1-699989984156764587646364437999
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH
Q ss_conf 12222233223453211110012334554320122210112100002688999988679707550464009998724998
Q gi|254780432|r 262 VAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP 341 (392)
Q Consensus 262 i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~ 341 (392)
+.+.+.... ..|+-|.++.+++.++|. +..+++..+..=..-+++|.+..... ++ .+.+..++.-++.. +.
T Consensus 216 ~i~~l~~~~--~pw~v~~~a~~a~~aal~---d~~~~~~~~~~l~~~r~~L~~~L~~~-g~--~~~~~~lF~~~~~~-~a 286 (339)
T PRK06959 216 LLAALRDAL--GAWTVSGPARHAVRAAFA---DRAWQAAMRERLAADGARLAALLRAH-GF--AVHATPLFSWTDDP-RA 286 (339)
T ss_pred HHHHHHHHC--CCCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CC--CCCCCEEEEEECCC-CH
T ss_conf 999999538--998977999999999963---99999999999999999999999977-99--86672058984688-99
Q ss_pred HHHHHHHHHCCEEEEECC-CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999996898996268-98899558986889999999999999999852
Q gi|254780432|r 342 ALLAAKFRDECLLTAPSS-DNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 342 ~~~~~~l~~~Gll~~~~~-~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
..+.+.|.++||+++... +..||+.-| =+++|.++++++|.+++.+|.
T Consensus 287 ~~~~~~L~~~GIlVR~f~~p~~LRi~vp--~~e~e~~RL~~AL~e~l~~~~ 335 (339)
T PRK06959 287 AALHAALAARGIWTRYFAAPPSVRIGLP--ADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred HHHHHHHHHCCEEEEECCCCCCEEEECC--CCHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999849929958899998898678--999999999999999999866
No 206
>PRK06855 aminotransferase; Validated
Probab=99.22 E-value=1.7e-09 Score=82.47 Aligned_cols=335 Identities=18% Similarity=0.134 Sum_probs=166.2
Q ss_pred CCCCEEEECHHHHHHHC-CCCCCH-HHHHHHHHHHHHC-C--CCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCC
Q ss_conf 79976464102267435-787899-9999999999731-4--50687578189999986520101----33312356555
Q gi|254780432|r 29 ENGIPFLDFASGIAVNS-LGHSHP-ELVAILKSQSEKL-W--HVSNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGA 99 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~-lGh~~p-~i~~a~~~q~~~~-~--~~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGs 99 (392)
..|++.|++.-| --- .+..-| .|++|+.+.+.+. . +++.....+.+.+.|+.+....+ .+.++.+++++
T Consensus 29 ~~G~~Ii~L~iG--eP~~~df~tP~~i~ea~~~a~~~~~~~~Yt~s~G~~eLReaIA~~~~~~~g~~~~pd~I~vt~Ga~ 106 (433)
T PRK06855 29 KLGIKINWENIG--DPIAKGEKIPLWMKEIVSELVMDDKSYGYCPTRGVLETREFLAELTNKRGGAQITPDDILFFNGLG 106 (433)
T ss_pred HCCCCEEECCCC--CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEECCHH
T ss_conf 779976574698--969899998889999999998589998869988849999999999998739999878988957769
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC--CCC
Q ss_conf 40356777665432001347860023435465654321234-553211347999864333222100268875410--123
Q gi|254780432|r 100 ESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATIS-AGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQI--SND 176 (392)
Q Consensus 100 eA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s-~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~--~~~ 176 (392)
+|..+.+ +- . .+|- .||...-+|--....... ..+.+... +. ....-...|++.+++.+ ..+
T Consensus 107 ~ai~~~~--~~----l--~pgd-eVlip~P~Yp~Y~~~~~~~~g~~pv~~----~l--~~e~~f~~d~e~l~~~i~~~~~ 171 (433)
T PRK06855 107 DAIAKIY--GF----L--RREA-RVLGPSPAYSTHSSAEAAHAGCEPVTY----RL--DPEDNWYPDLDDLENKVKYNPS 171 (433)
T ss_pred HHHHHHH--HH----C--CCCC-EEEECCCCCCCCHHHHHHHCCCEEEEE----EC--CHHCCCCCCHHHHHHHHHCCCC
T ss_conf 9999999--96----2--8999-899627887350999999689868999----55--7101877899999999866997
Q ss_pred CCCCC-CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC--CCCCCCCCEE--ECCCCCCC-C
Q ss_conf 32222-33322221124621012322110223457213101100344445553101--1124545302--10344444-4
Q gi|254780432|r 177 TAAIL-IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY--EWANVKPDIM--TIAKGMGG-G 250 (392)
Q Consensus 177 iAavi-~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~--e~~gi~PDi~--~~gK~l~g-G 250 (392)
+.+++ .-|-.= -|. +.+++.++.|.++|++||+++|.|||...+-=.|..+.+ +..+-.|-|+ .+||+.+. |
T Consensus 172 ~kaiii~nP~NP-TG~-v~s~e~l~~i~~~a~~~~i~visDEiY~~l~ydg~~~~s~~~~~~~~~~i~~ns~SK~~~mtG 249 (433)
T PRK06855 172 IAGILLINPDNP-TGA-VYPKEILREIVDIAREYDLFIIADEIYANIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPG 249 (433)
T ss_pred CEEEEEECCCCC-CCC-CCCHHHHHHHHHHHHHCCCEEEEECCCCCCEECCCCCCCHHHHCCCCCEEEEEEEHHCCCCCC
T ss_conf 249998389999-886-679999999999999759869863101124548987638899667577379820010389763
Q ss_pred CCCCCCC----CCCCCCCCCCCCCCC---CCCCCCCCCHHHHHHHHHHHHCCCC----CCHHHHHCCHHHHHHHHHHHHC
Q ss_conf 3443210----001112222233223---4532111100123345543201222----1011210000268899998867
Q gi|254780432|r 251 FPIGACL----ATNEVAACMNQGSHG---STYGGNVLAMVLGEKVLNIIQSDGF----LENVINIAKILFEGLTAIKNRF 319 (392)
Q Consensus 251 ~P~sav~----~~~~i~~~~~~~~~~---~T~~gnpl~~aaa~a~L~~l~~~~l----~~~~~~~g~~l~~~L~~l~~~~ 319 (392)
.=+|-+. ..++++..+-...+. .+...+.++-.++.+.+..=+.+.. .+..+++-+.+.+.|++ .
T Consensus 250 wRiG~~~~~~~~~~~~~~~~~~~i~~~~~~~~cs~~~~Q~a~~a~l~~~~~~~~~~e~~~~y~~RRd~l~~~L~~----i 325 (433)
T PRK06855 250 SRCGWIEVYNAEKDPVFKKYIKSILDAKMIEVCSTTLPQKAIPAIMSHPEYKPYLEERNSRYEKRSNIAYEYLKD----I 325 (433)
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC----C
T ss_conf 126788631577369999999999987742758138999999998559843799999999999999999999956----9
Q ss_pred CCEEEEECCCEEEEEE-EEC-----------------------------CCHHHHHHH-HHHCCEEEEECC-----CCEE
Q ss_conf 9707550464009998-724-----------------------------998999999-996898996268-----9889
Q gi|254780432|r 320 PNMFLEVRGQGLLIGL-KTV-----------------------------FSPALLAAK-FRDECLLTAPSS-----DNVV 363 (392)
Q Consensus 320 ~~~v~~vRG~Gl~~~i-e~~-----------------------------~~~~~~~~~-l~~~Gll~~~~~-----~~~i 363 (392)
|+ +.-..-.|.|..+ .+. .++..++.+ |.+.||.+.|.. ++..
T Consensus 326 pG-v~~~~P~GAFY~fv~~~~~~l~~~~~lp~~~~~~~~~~~~~~~~~~~~D~~f~~~LLee~gVavVPGS~FG~~~~gf 404 (433)
T PRK06855 326 PG-LKVNRTNGAFYMTVVFEDGVLNNRQSLPIENAEVRELVESLVKQGVAPDKRFVYYLLASTGICVVPLSSFCTELNGF 404 (433)
T ss_pred CC-CEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCE
T ss_conf 99-37169971158753055323563224665554678888765412788679999999985599996571128999966
Q ss_pred EECCCCCCCHHHHHHHH-HHHHHHHHH
Q ss_conf 95589868899999999-999999998
Q gi|254780432|r 364 RILPPLTITAEEIHEGL-ERIERTAIK 389 (392)
Q Consensus 364 rl~Ppl~it~~eid~~i-~~l~~al~~ 389 (392)
|++ +.-++|++.+.+ .+|.+-+.+
T Consensus 405 Rit--~l~~~E~~~E~i~r~~~e~~~e 429 (433)
T PRK06855 405 RVT--LLERDEEKFEWIYRTLAEKIGE 429 (433)
T ss_pred EEE--ECCCCHHHHHHHHHHHHHHHHH
T ss_conf 999--5797079999999999999999
No 207
>KOG1358 consensus
Probab=99.22 E-value=6.9e-10 Score=85.10 Aligned_cols=335 Identities=19% Similarity=0.215 Sum_probs=192.6
Q ss_pred EEEEEECCCEEEECCCCEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCCCC--C-C-CCCC-HHHHHHHHHHHHHCCC
Q ss_conf 489850103799679976464102267435787-8999999999999731450--6-8-7578-1899999865201013
Q gi|254780432|r 16 IRFEKGKGAWLFSENGIPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLWHV--S-N-LYQS-TQQEIFANHLIHSTFA 89 (392)
Q Consensus 16 ~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~~~--~-~-~~~~-~~~~~la~~L~~~~~~ 89 (392)
.+.+..-+..++ .||++++.|.|. +-||- .|+++.+.+...+.++.-. + . +|.+ .....+.++|.+-.|.
T Consensus 79 ~v~e~~~~~~~~-i~G~~~~N~aS~---NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~ 154 (467)
T KOG1358 79 PVLESVMLPHVT-IDGKDVLNFASA---NFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT 154 (467)
T ss_pred CCCCCCCCCCEE-ECCCEEECCCCH---HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHCC
T ss_conf 301135678657-638400111210---0355405677899999999973887767876431221104667789875088
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 33123565554035677766543200134786002343546565432123455321134799986433322210026887
Q gi|254780432|r 90 DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSL 169 (392)
Q Consensus 90 ~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l 169 (392)
+....-.-|-.++++++. .| +.|-.||..+.+-+ .+ .+++.+--..-.....+||.+.+
T Consensus 155 E~aivYs~gF~ti~S~ip---af------sKrGDIi~~de~~n----fa--------Iq~GlqlSRS~i~~Fkhndm~~l 213 (467)
T KOG1358 155 EDAIVYSYGFSTIESAIP---AF------SKRGDIIFVDEAVN----FA--------IQKGLQLSRSTISYFKHNDMEDL 213 (467)
T ss_pred CCEEEECCCCCHHHHCCH---HH------HCCCCEEEEEHHHH----HH--------HHHHHHHHHHEEEEECCCCHHHH
T ss_conf 642663266300320001---23------11476799862102----99--------88777640200378547887889
Q ss_pred HHHCCCCC-------------CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCC-C-CCCCCCCCCCCCC
Q ss_conf 54101233-------------2222333222211246210123221102234572131011003-4-4445553101112
Q gi|254780432|r 170 KNQISNDT-------------AAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQT-G-YGRTGKLFAYEWA 234 (392)
Q Consensus 170 ~~~~~~~i-------------Aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G-~GRtG~~f~~e~~ 234 (392)
+..+.+.. --+++|-+.-+-|.+.| ++.+-++..||-.-+|+||..+ | +||||+- -.+|+
T Consensus 214 erll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrG-vteH~ 288 (467)
T KOG1358 214 ERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRVILDESLSFGVLGKTGRG-VTEHF 288 (467)
T ss_pred HHHCCCCCHHHHHCCCCCCCEEEEEEEEECCCCCCCCC----CHHHHHHHHHHEEEEEEECCCCCCCCCCCCCC-CCCCC
T ss_conf 97545762223314444541379999764047775035----09999987662589998333332430356866-32468
Q ss_pred CCCC---CEEE--CCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHCC-CCCCHHHHH
Q ss_conf 4545---3021--034444--44344321000111222223322345321--111001233455432012-221011210
Q gi|254780432|r 235 NVKP---DIMT--IAKGMG--GGFPIGACLATNEVAACMNQGSHGSTYGG--NVLAMVLGEKVLNIIQSD-GFLENVINI 304 (392)
Q Consensus 235 gi~P---Di~~--~gK~l~--gG~P~sav~~~~~i~~~~~~~~~~~T~~g--npl~~aaa~a~L~~l~~~-~l~~~~~~~ 304 (392)
++.+ ||++ ++-+|+ ||+ ++++.-+.+.-.=+..+.-|+. -|....||..++++++++ +..+..+.+
T Consensus 289 ~v~~~~iDiv~~sm~~alas~GgF----c~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k 364 (467)
T KOG1358 289 GVPITDIDIVTASMETALASGGGF----CAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAK 364 (467)
T ss_pred CCCCCCEEEEEECCCCCCCCCCCE----EECCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHCC
T ss_conf 988031125651144443146754----3255236753001566256513475555456777777776184022222202
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCEE--EEEEEECC-----C-----HHHHHHHHHHCCEEEEEC----CCC------E
Q ss_conf 000268899998867970755046400--99987249-----9-----899999999689899626----898------8
Q gi|254780432|r 305 AKILFEGLTAIKNRFPNMFLEVRGQGL--LIGLKTVF-----S-----PALLAAKFRDECLLTAPS----SDN------V 362 (392)
Q Consensus 305 g~~l~~~L~~l~~~~~~~v~~vRG~Gl--~~~ie~~~-----~-----~~~~~~~l~~~Gll~~~~----~~~------~ 362 (392)
...+...|.... . ..+.|.-. +.-+.+.. + -+.++.++..+++++... ..+ .
T Consensus 365 ~~~~H~~l~~~s----~--~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pS 438 (467)
T KOG1358 365 VAKFHAALSSNS----G--FIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPS 438 (467)
T ss_pred CCCCCHHHHCCC----C--EEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHCCCCCCCCC
T ss_conf 521046660477----2--5984686772001232455566677999999999999862531003145530334799985
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9955898688999999999999999985
Q gi|254780432|r 363 VRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 363 irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
||+...--++++||+++.+.|+++...+
T Consensus 439 iri~~~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358 439 IRICVSAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 7998707999999999999999999864
No 208
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.21 E-value=4.1e-10 Score=86.55 Aligned_cols=279 Identities=15% Similarity=0.194 Sum_probs=166.5
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101333123565554035677766543200134786002343546565432123455321134
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYL 148 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~ 148 (392)
.+..||....|+++|.+.-+.+.+..+.||--|+.+.+-+. ++|. .||+-+..|.|.....- .+.
T Consensus 47 ~R~~nPt~~~le~~la~LEg~~~a~~f~SGmaAi~~~l~~l--------~~Gd-~vv~~~~~Yg~t~~~~~------~~l 111 (366)
T PRK08247 47 SRTKNPTRGLLEQAIADLEGGDQGFACSSGMAAIQLVMSLF--------RSGD-ELIVSSDLYGGTYRLFE------EHW 111 (366)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHH--------CCCC-EEEEECCCCCCHHHHHH------HHH
T ss_conf 18998679999999999829850531166899999999973--------8999-89995896864889988------775
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 79998643332221002688754101233222233322221124621012322110223457213101100344445553
Q gi|254780432|r 149 EGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKL 228 (392)
Q Consensus 149 ~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~ 228 (392)
..++- .+..++..|.+.+++.+.++.-.|++|+.-.-. ...++ ++++.++|+++|+++|+|-+.. ..
T Consensus 112 ~~~Gi---~~~~~d~~d~~~~~~~i~~~Tkli~~Esp~NP~-l~v~D---i~~i~~iA~~~g~~~vvDNT~a------tP 178 (366)
T PRK08247 112 KKWGV---RFVYVNTASIKAIEQAITPNTKAIFIETPTNPL-MQETD---IAAIAKIAKKHGLLLIVDNTFY------TP 178 (366)
T ss_pred CCCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCEEEECCCCC------CC
T ss_conf 07746---999848889799997538675499985599985-35015---9999999864670498417734------41
Q ss_pred CCCCCCCCCCCEEE--CCCCCCCC--CCCCCCCCC-CCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
Q ss_conf 10111245453021--03444444--344321000-11122222332--2345321111001233455432012221011
Q gi|254780432|r 229 FAYEWANVKPDIMT--IAKGMGGG--FPIGACLAT-NEVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQSDGFLENV 301 (392)
Q Consensus 229 f~~e~~gi~PDi~~--~gK~l~gG--~P~sav~~~-~~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~ 301 (392)
+.++-++.=.||++ ..|-|+|- .=.|+++++ +++.+.+.... .|.+. +|..|...+..|+-+. -|+
T Consensus 179 ~~~~Pl~~GaDivihS~TKyi~GhsDvl~G~vv~~~~~~~~~l~~~~~~~G~~~--~p~~a~l~~rGl~TL~-----lR~ 251 (366)
T PRK08247 179 VLQRPLTEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVL--SPFDSWLLIRGMKTLA-----LRM 251 (366)
T ss_pred CCCCCHHCCCCEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCC--CHHHHHHHHCCCCCHH-----HHH
T ss_conf 335741028978997424201588871547997273888889999997336677--9377778863525099-----999
Q ss_pred HHHCCHHHHHHHHHHHHCCCEEEEE--CCCEEEEEEEECCCHHHHHHHHHHCC-EEEE---ECC----------------
Q ss_conf 2100002688999988679707550--46400999872499899999999689-8996---268----------------
Q gi|254780432|r 302 INIAKILFEGLTAIKNRFPNMFLEV--RGQGLLIGLKTVFSPALLAAKFRDEC-LLTA---PSS---------------- 359 (392)
Q Consensus 302 ~~~g~~l~~~L~~l~~~~~~~v~~v--RG~Gl~~~ie~~~~~~~~~~~l~~~G-ll~~---~~~---------------- 359 (392)
++..+- ...+.++.++||. |..| -|.|-|++|++... ....++.++- ++.. -.+
T Consensus 252 ~~~~~n-A~~lA~~L~~hp~-V~~V~yPG~gg~~sf~l~~~--~~~~~f~~~l~l~~~a~SlGg~eSLi~~pa~~th~~~ 327 (366)
T PRK08247 252 RQHEEN-AKALAAFLNEQPG-VTDVLYPGKGGMLSFRLQDE--EWVNPFLKSLKLITFAESLGGVESFITYPATQTHMDI 327 (366)
T ss_pred HHHHHH-HHHHHHHHHCCCC-EEEEECCCCCCEEEEEECCH--HHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCC
T ss_conf 999999-9999999861997-04895699877799997888--9999999847436681265767724457642454228
Q ss_pred -----------CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -----------9889955898688999999999999999985
Q gi|254780432|r 360 -----------DNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 360 -----------~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
++.||++. --|+++++++-|+++|+++
T Consensus 328 ~~~~r~~~Gi~~~liRlSv----GLEd~~DLi~Dl~qAL~~i 365 (366)
T PRK08247 328 PEEIRIANGVCNRLLRFSV----GIENVEDLKADLKQAFKQV 365 (366)
T ss_pred CHHHHHHCCCCCCEEEEEE----EECCHHHHHHHHHHHHHHC
T ss_conf 9999997598929599995----0089999999999999953
No 209
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.21 E-value=6.4e-10 Score=85.31 Aligned_cols=305 Identities=12% Similarity=0.105 Sum_probs=171.4
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99764641022674357878999999999999731450687578189999986520101333123565554035677766
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTA 109 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aikla 109 (392)
+=.++|||.++ .+.+|..-|.+.. +++.+++.. . ..+.+.+.+..+.+.+...|+.+|++....++.
T Consensus 18 ~~~~iiDfSsN--iNP~g~P~~~~~~---~~~~ryP~~-------~-~~L~~a~a~~~g~~~vl~gnGs~e~I~ll~~l~ 84 (330)
T PRK05664 18 PLADWLDLSTG--IAPWPWPVPPIPA---DAWARLPET-------D-DGLEAAARAYYGAPQLLPVAGSQAAIQALPRLR 84 (330)
T ss_pred CHHHEEECCCC--CCCCCCCHHHHHH---HHHHHCCCC-------C-HHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHH
T ss_conf 99991553788--8999998688889---999877999-------6-899999998719973999416999999999974
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 54320013478600234354656543212345532113479998643332221002688754101233222233322221
Q gi|254780432|r 110 RRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEG 189 (392)
Q Consensus 110 r~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~ 189 (392)
.++| ++....+|--... +....| . .+..++ .+.+.....+-=-.||.-|=.=.
T Consensus 85 --------~~~~--v~i~~PtfseY~~-a~~~~g-------~-----~v~~~~---~~~~~~~~~~~d~v~l~nPNNPT- 137 (330)
T PRK05664 85 --------APGR--VGVLSPCYAEHAH-AWRRAG-------H-----QVRELD---EAEVEAALDSLDVLVVVNPNNPT- 137 (330)
T ss_pred --------CCCE--EEECCCCHHHHHH-HHHHCC-------C-----EEEECC---HHHHHHCCCCCCEEEECCCCCCC-
T ss_conf --------8994--6884888799999-999869-------9-----889768---77776226788989982792886-
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf 1246210123221102234572131011003444455531011124545302---1034444-44344321000111222
Q gi|254780432|r 190 GVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNEVAAC 265 (392)
Q Consensus 190 G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~~~ 265 (392)
|. ..+++-+..+.+.|++.++++|+||-...|.--..+-.. .-.|.++ +|+|..| .|+-+|.++++.++++.
T Consensus 138 G~-~~~~~~l~~~~~~~~~~~~~lvvDEay~d~~~~~s~~~~---~~~~nlivlrS~sK~~glaGlRlGy~~a~~~~i~~ 213 (330)
T PRK05664 138 GR-RFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAAC---AHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRA 213 (330)
T ss_pred CC-CCCHHHHHHHHHHHHHCCCEEEEECHHHCCCCCHHHHHH---CCCCCEEEEEECCHHHCCCCCCCEEHCCCHHHHHH
T ss_conf 68-989999999999865319889997532116873114663---35899899840447426854030201089999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCHHHHH
Q ss_conf 22332234532111100123345543201222101121000026889999886797075504640099987249989999
Q gi|254780432|r 266 MNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSPALLA 345 (392)
Q Consensus 266 ~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~~~~ 345 (392)
+.... ..|+-|.++.++|.++|+ +.++.++..+.-..-+++|.+....+ ++ ....+.-.++-+. ..+...+.
T Consensus 214 l~~~~--~pw~Vn~~a~~aa~aaL~---d~~~~~~~~~~l~~er~~l~~~L~~~-g~-~~~~s~anF~l~~-~~~a~~l~ 285 (330)
T PRK05664 214 LAELL--GPWTVSGPTRWLAQAALA---DTPWQRQQRERLLAASQRLAALLRRH-GL-PPAGGCALFQWVR-TEDAAALH 285 (330)
T ss_pred HHHHC--CCCCCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CC-EECCCCCEEEEEE-CCCHHHHH
T ss_conf 99844--999860999999999963---99999999999999999999999978-88-4279953699962-59999999
Q ss_pred HHHHHCCEEEEECC-CCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99996898996268-98899558986889999999999999999
Q gi|254780432|r 346 AKFRDECLLTAPSS-DNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 346 ~~l~~~Gll~~~~~-~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
+.|.++||+++.++ ...||++-+ -+|++..++..+|..--+
T Consensus 286 ~~L~~~GIlVR~~~~~~~LRi~i~--~~e~~~~rL~~AL~~~~~ 327 (330)
T PRK05664 286 EFLARRGILTRLFEQPPSLRFGLP--ADEADWARLDQALLAYRK 327 (330)
T ss_pred HHHHHCCEEEEECCCCCCEEEECC--CCHHHHHHHHHHHHHHHH
T ss_conf 999969949978899997798579--887889999999999997
No 210
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein; InterPro: IPR010969 This entry describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulphurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N terminus. The function of members of this family are unknown..
Probab=99.19 E-value=1.4e-09 Score=83.01 Aligned_cols=311 Identities=17% Similarity=0.190 Sum_probs=188.5
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCC-------HHHHHHHHHHHHHCC---CCCCCCCCCCCCCHHHHHHHHHHHH-HCCC
Q ss_conf 8999999999999731450687578-------189999986520101---3331235655540356777665432-0013
Q gi|254780432|r 49 SHPELVAILKSQSEKLWHVSNLYQS-------TQQEIFANHLIHSTF---ADRVFFTNSGAESVECAIKTARRYH-YMAG 117 (392)
Q Consensus 49 ~~p~i~~a~~~q~~~~~~~~~~~~~-------~~~~~la~~L~~~~~---~~~v~f~~SGseA~e~Aiklar~~~-~~~g 117 (392)
..++|.+||.+.++...-...+..+ ....|.-+.|.+.+. ..+|.|+++-|+|-=.+|+ . ..+.
T Consensus 12 KP~ev~~a~~~~~~~~gg~~gRG~~~~~l~~~~~v~EtR~~lA~Lf~~~~~~~v~Ft~nAT~aLN~~L~-----Gl~lkn 86 (384)
T TIGR01977 12 KPDEVYEAMADFLKNYGGSPGRGRYRLALRASREVEETRELLAKLFNAPSKAHVVFTNNATTALNIALK-----GLILKN 86 (384)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHH-----CCCCCC
T ss_conf 738999999999873487568887503454142288999999998488974627840607799999984-----330005
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCHHHHHHHHHCCCC-CCCCCCCCCCCCCCC
Q ss_conf 478600234-35465654321234553211347----999864333222100268875410123-322223332222112
Q gi|254780432|r 118 KTNKFRIVT-FEGAFHGRTLATISAGGKLQYLE----GFGPKIEGFDQAKFCDLQSLKNQISND-TAAILIEPIQGEGGV 191 (392)
Q Consensus 118 ~t~r~~ii~-~~~~yHG~t~~a~s~s~~~~~~~----~~~p~~~~~~~~~~~d~~~l~~~~~~~-iAavi~Epv~g~~G~ 191 (392)
+.|...|+| +|+. |+--...+.+ +..-..-.....-.-|.|.+++.+.++ ..++|+-=...-.|.
T Consensus 87 r~g~hVi~t~mEHN---------sV~RPL~~L~~~~~g~~~~iv~~~~~G~~~~e~i~~~~~~~kTk~iv~~HaSNV~G~ 157 (384)
T TIGR01977 87 REGDHVITTPMEHN---------SVLRPLEKLKEERIGVEITIVKCDNEGLISPERIKRAIKKNKTKLIVVSHASNVTGT 157 (384)
T ss_pred CCCCCEEECCCCHH---------HHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECHHHHCCC
T ss_conf 59996786476023---------664389999735997589986278885216799998533788300432200301031
Q ss_pred CCCCHHHHHHHH-CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCCC--CCCCCCCCCCCCCC
Q ss_conf 462101232211-02234572131011003444455531011124545302103--44444434--43210001112222
Q gi|254780432|r 192 RKVPEEFLQQLR-KICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA--KGMGGGFP--IGACLATNEVAACM 266 (392)
Q Consensus 192 ~~~~~~~l~~l~-~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g--K~l~gG~P--~sav~~~~~i~~~~ 266 (392)
+.| ++++- ++|+++|+++|+|=-|| .|=.= -=.+...| |+++|. |+|=| | +|+++.++++.+.+
T Consensus 158 ilp----iEEIgR~lA~e~g~~~~~DAaQt-AGv~~--Id~~~~~i--~~lAF~GHKgLlG--P~GtGGl~~~e~~~~~l 226 (384)
T TIGR01977 158 ILP----IEEIGRELAKENGIFFILDAAQT-AGVIP--IDMEELAI--DMLAFTGHKGLLG--PQGTGGLIIKEGIKEIL 226 (384)
T ss_pred CCC----HHHHHHHHHHHCCCEEEEECCCC-CCCCH--HCCCHHHC--CEEEECCCHHHHC--CCCCEEEEEECCHHHHH
T ss_conf 125----78999999986797399832000-37541--01032206--7676377522001--13631578873705674
Q ss_pred CCCC------CCCCC-------------CCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCC--EEE-
Q ss_conf 2332------23453-------------2111100123345543201222101121000026889999886797--075-
Q gi|254780432|r 267 NQGS------HGSTY-------------GGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPN--MFL- 324 (392)
Q Consensus 267 ~~~~------~~~T~-------------~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~--~v~- 324 (392)
.+.. +|.-+ .-|-.+.+.=++.++++++.++ +++++.+..+.+.+.+...+.+. +++
T Consensus 227 ~pl~~GGTGs~S~~~~~P~~~PdrfE~GTLN~pGI~gL~agik~~~~~gi-~~i~~kE~~l~~~l~~~L~~~~~V~iyG~ 305 (384)
T TIGR01977 227 KPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGI-ANIAKKELKLTEKLLNGLKEIKKVKIYGP 305 (384)
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCEEEECC
T ss_conf 53206887545344457760432011440037999999888788756447-78999999999999874016780676277
Q ss_pred -EECCCEEEEEEEECC-CHHHHHHHHHHCC-EEE------EECC--------CCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf -504640099987249-9899999999689-899------6268--------98899558986889999999999999
Q gi|254780432|r 325 -EVRGQGLLIGLKTVF-SPALLAAKFRDEC-LLT------APSS--------DNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 325 -~vRG~Gl~~~ie~~~-~~~~~~~~l~~~G-ll~------~~~~--------~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
+++-++-.++|.... ++..+...|.++. |.+ .|.. ..+|||++..--|++||++++++|++
T Consensus 306 ~d~~~~~~vvSf~~~g~d~~~va~~L~~~~~I~~RtGlHCAPLAH~~~GT~~~Gt~R~S~gyFnt~ee~~~l~~al~~ 383 (384)
T TIGR01977 306 KDPAKRVGVVSFTVEGIDSEEVADILDEKFDIAVRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLVEALSE 383 (384)
T ss_pred CCHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 034332675899834888778999998618918976766641230353116765388727877888999999999850
No 211
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.19 E-value=4e-09 Score=80.14 Aligned_cols=342 Identities=18% Similarity=0.234 Sum_probs=192.4
Q ss_pred EECCCEEEECCC-CEEEECHHHHHHHCCCC-CCHHHHHHHHHHHHHCCCCCCCCCCH-HHHHHHHHHHHHCC----CCCC
Q ss_conf 501037996799-76464102267435787-89999999999997314506875781-89999986520101----3331
Q gi|254780432|r 20 KGKGAWLFSENG-IPFLDFASGIAVNSLGH-SHPELVAILKSQSEKLWHVSNLYQST-QQEIFANHLIHSTF----ADRV 92 (392)
Q Consensus 20 ~a~G~~i~d~dG-~~yiD~~~g~~~~~lGh-~~p~i~~a~~~q~~~~~~~~~~~~~~-~~~~la~~L~~~~~----~~~v 92 (392)
++..+.=||..+ ++ |..-. |++-+-. ..|+|++|+++.++..-+.-+ +.++ ....+.....+... .+.+
T Consensus 11 ~~t~s~KWd~~~g~~--DvlPm-WVADMDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i 86 (388)
T COG1168 11 LGTNSLKWDAHPGNE--DVLPM-WVADMDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWI 86 (388)
T ss_pred CCCCCEECCCCCCCC--CCCEE-EEECCCCCCCHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 288750025568988--84134-32004678887999999999865877887-887789999999999713777885528
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 23565554035677766543200134786002343546565432123455321134799986433322210026887541
Q gi|254780432|r 93 FFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQ 172 (392)
Q Consensus 93 ~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~ 172 (392)
+|+.+-=-++..+|+.-. ++| ..|+.....|+=- ..++...++.... .|+...-... .-|+++|++.
T Consensus 87 ~~~p~VVpgi~~~I~~~T-------~~g-d~Vvi~tPvY~PF-~~~i~~n~R~~i~---~pL~~~~~~y-~iD~~~LE~~ 153 (388)
T COG1168 87 VFVPGVVPGISLAIRALT-------KPG-DGVVIQTPVYPPF-YNAIKLNGRKVIE---NPLVEDDGRY-EIDFDALEKA 153 (388)
T ss_pred EECCCCHHHHHHHHHHHC-------CCC-CEEEECCCCCHHH-HHHHHHCCCEEEE---CCCCCCCCCE-EECHHHHHHH
T ss_conf 983751276999999837-------699-8269648886189-9987516967974---6643469847-7529999999
Q ss_pred CCCC--CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC-CCCCCCCCCCCCC-----EEEC-
Q ss_conf 0123--32222333222211246210123221102234572131011003444455-5310111245453-----0210-
Q gi|254780432|r 173 ISND--TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG-KLFAYEWANVKPD-----IMTI- 243 (392)
Q Consensus 173 ~~~~--iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG-~~f~~e~~gi~PD-----i~~~- 243 (392)
+.+. ..-++..|=. -.| +..+++.|+++.++|.+||+.+|.|||-+-+-=+| +.+. .+.+.|+ |+|+
T Consensus 154 ~~~~~vkl~iLCnPHN-P~G-rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~--~a~ls~~~a~~~it~~s 229 (388)
T COG1168 154 FVDERVKLFILCNPHN-PTG-RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIP--FASLSERFADNSITLTS 229 (388)
T ss_pred HHCCCCCEEEEECCCC-CCC-CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCC--HHHCCHHHHCCEEEEEE
T ss_conf 8437760899937999-998-6436999999999999839989830335661216987665--43269554323599840
Q ss_pred -CCCCC-CCCCCCCCCCCCC-CCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH----HHHHCCHHHHHHHHH
Q ss_conf -34444-4434432100011-1222223-32234532111100123345543201222101----121000026889999
Q gi|254780432|r 244 -AKGMG-GGFPIGACLATNE-VAACMNQ-GSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN----VINIAKILFEGLTAI 315 (392)
Q Consensus 244 -gK~l~-gG~P~sav~~~~~-i~~~~~~-~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~----~~~~g~~l~~~L~~l 315 (392)
+|+.+ .|+-+|.++..++ +-+.+.. ........-|.+++.|..++.+. .+.+++. ++..-+++.+.+++
T Consensus 230 aSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~--G~~WLd~L~~yl~~N~~~~~~~l~~- 306 (388)
T COG1168 230 ASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQ--GEPWLDELLEYLKDNRDYVADFLNK- 306 (388)
T ss_pred CCCCCCCHHHHHEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 5221560444421478348899999999998733799846889999999972--6499999999999989999999986-
Q ss_pred HHHCCCE-EEEECCCEEEEEEEE---CCCHHHHHHHHHHCC-E------EEEECCCCEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 8867970-755046400999872---499899999999689-8------9962689889955898688999999999999
Q gi|254780432|r 316 KNRFPNM-FLEVRGQGLLIGLKT---VFSPALLAAKFRDEC-L------LTAPSSDNVVRILPPLTITAEEIHEGLERIE 384 (392)
Q Consensus 316 ~~~~~~~-v~~vRG~Gl~~~ie~---~~~~~~~~~~l~~~G-l------l~~~~~~~~irl~Ppl~it~~eid~~i~~l~ 384 (392)
..|.+ +....|.=|+| ++| ..++..+++.++++. | ..+..|...+|+- +..+.+-+++++++|.
T Consensus 307 --~~P~v~v~~p~gTYL~W-LD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN--~acpr~~L~eal~ri~ 381 (388)
T COG1168 307 --HLPGVKVTEPQGTYLAW-LDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLN--FACPRAILEEALERLK 381 (388)
T ss_pred --HCCCCEEECCCCCEEEE-EECCCCCCCHHHHHHHHHHHHCEECCCCCCCCCCCCCEEEEE--CCCCHHHHHHHHHHHH
T ss_conf --59874786688756665-320023898578999999751571357875676787458886--3798899999999999
Q ss_pred HHHHHH
Q ss_conf 999985
Q gi|254780432|r 385 RTAIKL 390 (392)
Q Consensus 385 ~al~~L 390 (392)
++++++
T Consensus 382 ~al~~~ 387 (388)
T COG1168 382 RALKKR 387 (388)
T ss_pred HHHHCC
T ss_conf 998525
No 212
>KOG1357 consensus
Probab=99.19 E-value=6.5e-10 Score=85.28 Aligned_cols=208 Identities=19% Similarity=0.225 Sum_probs=132.0
Q ss_pred CCCCCCHHHHHHHHHCCCC-------------CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCC--CC
Q ss_conf 3222100268875410123-------------32222333222211246210123221102234572131011003--44
Q gi|254780432|r 158 FDQAKFCDLQSLKNQISND-------------TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQT--GY 222 (392)
Q Consensus 158 ~~~~~~~d~~~l~~~~~~~-------------iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t--G~ 222 (392)
.....+||.+.||+.+.+. .--+|+|-|.++.|.+.- |+.+.++||+|...|++||--+ ..
T Consensus 245 iRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~ 320 (519)
T KOG1357 245 TRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAM 320 (519)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCCCEECC----CHHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf 79986388777999999887527877688502203420110105672116----19988752043379984010002553
Q ss_pred CCCCCCCCCCCCCCCC---CEE--ECCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHH
Q ss_conf 4455531011124545---302--1034444--4434432100011122222332234532--11110012334554320
Q gi|254780432|r 223 GRTGKLFAYEWANVKP---DIM--TIAKGMG--GGFPIGACLATNEVAACMNQGSHGSTYG--GNVLAMVLGEKVLNIIQ 293 (392)
Q Consensus 223 GRtG~~f~~e~~gi~P---Di~--~~gK~l~--gG~P~sav~~~~~i~~~~~~~~~~~T~~--gnpl~~aaa~a~L~~l~ 293 (392)
|+||.- .++++++.| ||+ ++-|+.+ ||| +.+++++.+.+...++..+|+ -+|..+.-.+..|++|.
T Consensus 321 g~tGrg-vce~~g~d~~dvDImMGtftKSfga~GGy----iagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~ 395 (519)
T KOG1357 321 GATGRG-VCEYFGVDPEDVDIMMGTFTKSFGAAGGY----IAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIM 395 (519)
T ss_pred CCCCCC-EEECCCCCCHHHEEECCEEHHHCCCCCCE----ECCCHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 788874-22346888246202201002104566660----0283887741004788424203678288999998787524
Q ss_pred CCCCCCHHH-------HHCCHHHHHHHHHHHHCCCEEEEECCCEEEEE-EE----------ECCCHHHHHHHHHHCCEEE
Q ss_conf 122210112-------10000268899998867970755046400999-87----------2499899999999689899
Q gi|254780432|r 294 SDGFLENVI-------NIAKILFEGLTAIKNRFPNMFLEVRGQGLLIG-LK----------TVFSPALLAAKFRDECLLT 355 (392)
Q Consensus 294 ~~~l~~~~~-------~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~-ie----------~~~~~~~~~~~l~~~Gll~ 355 (392)
.++-.+.-+ +...+|+..| +..|++.. -+ ....-..+.+.|.++.+-+
T Consensus 396 G~dgt~~g~~k~~~l~~ns~yfr~~l--------------~~~gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~nigv 461 (519)
T KOG1357 396 GEDGTNRGRQKIERLAENSRYFRWEL--------------QKMGFIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNIGV 461 (519)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH--------------CCCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHCCCEE
T ss_conf 88764077999999875028998751--------------0482899167888764366327531407899998647359
Q ss_pred EECC-------CCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 6268-------98899558986889999999999999999
Q gi|254780432|r 356 APSS-------DNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 356 ~~~~-------~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
...+ ..++||.-+-.-|.+++|++++.+++.=.
T Consensus 462 VvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357 462 VVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGD 501 (519)
T ss_pred EEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCH
T ss_conf 9972799457776778654235557889999998866331
No 213
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.19 E-value=1.7e-09 Score=82.57 Aligned_cols=305 Identities=12% Similarity=0.101 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999999999731450687578189999986520101333123565554035677766543200134786002343546
Q gi|254780432|r 51 PELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGA 130 (392)
Q Consensus 51 p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~ 130 (392)
++-++++.+.+++.+.++ ..+...+|++++.+..+...+..++|||.|.+.|+++.- . ++| +.||+-.-+
T Consensus 11 ~~e~~~v~~~l~sg~~~~---~G~~v~~fE~~~a~~~g~~~av~v~sgT~AL~lal~~l~---i---~~g-deVivp~~t 80 (375)
T PRK11706 11 GTELDYIQEAMSSGKLSG---DGGFTRRCQQWLEQRFGCAKVLLTPSCTAALEMAALLLD---I---QPG-DEVIMPSYT 80 (375)
T ss_pred HHHHHHHHHHHHCCCCCC---CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCC---C---CCC-CEEEECCCC
T ss_conf 899999999997098768---997999999999999784939996788999999999869---8---893-999989966
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 5654321234553211347999864333222100-268875410123322223332222112462101232211022345
Q gi|254780432|r 131 FHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFC-DLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDI 209 (392)
Q Consensus 131 yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~-d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~ 209 (392)
|-. |-..-.+.+..|-..+++...++ |.+.+++.+.+++-|||.=.+.|. +. + +.+|+++|++|
T Consensus 81 f~a--------t~~ai~~~Ga~pvfvDid~~t~~id~~~ie~~it~ktkaIi~Vh~~G~----~~--d-~~~I~~iak~~ 145 (375)
T PRK11706 81 FVS--------TANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPVHYAGV----AC--E-MDTIMALAKKH 145 (375)
T ss_pred HHH--------HHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCC----CC--C-HHHHHHHHHHC
T ss_conf 499--------999999839969999716875776789999870867549999678898----66--7-89999988537
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC----CCCCCCCCCCCCCCCC-CCCCCCCC----C-----------
Q ss_conf 72131011003444455531011124545302103----4444443443210001-11222223----3-----------
Q gi|254780432|r 210 DALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA----KGMGGGFPIGACLATN-EVAACMNQ----G----------- 269 (392)
Q Consensus 210 g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g----K~l~gG~P~sav~~~~-~i~~~~~~----~----------- 269 (392)
|+.+|-|=-|+ ||-+ +--...|---|+-|+| |.|+.|= -|++++++ ++++.... +
T Consensus 146 ~i~vIEDaA~a-~Gs~---~~g~~~Gt~Gd~~~fSF~~~K~ittGe-GG~i~tnd~~l~~~~~~lr~~G~~~~~~~~g~~ 220 (375)
T PRK11706 146 NLFVVEDAAQG-VMST---YKGRALGTIGHLGCFSFHETKNYTAGE-GGALLINDPALIERAEIIREKGTNRSQFFRGQV 220 (375)
T ss_pred CCEEEECCCCC-CCCC---CCCEECCCCCCCCCCCCCCCCCCCCCC-CEEEEECCHHHHHHHHHHHHHCCCHHHHHCCCC
T ss_conf 90898344003-6876---676445767998885898898787768-749997999999999999982876157655787
Q ss_pred ------CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHH----CCCEEEEECCCEEEEEEEEC-
Q ss_conf ------2234532111100123345543201222101121000026889999886----79707550464009998724-
Q gi|254780432|r 270 ------SHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNR----FPNMFLEVRGQGLLIGLKTV- 338 (392)
Q Consensus 270 ------~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~----~~~~v~~vRG~Gl~~~ie~~- 338 (392)
..|.-|..+.+.+|.+++-|+.++ +++++-+++.++..+.|..+... .|....+.+...-++.+-+.
T Consensus 221 ~~y~~~~~G~N~rms~lqAAigl~QL~~ld--~~~~~R~~i~~~Y~~~L~~l~~~~~i~~p~~~~~~~~~~~~~~i~~~~ 298 (375)
T PRK11706 221 DKYTWVDIGSSYLPSELQAAYLWAQLEAAD--RINQQRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRD 298 (375)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCEEEEEEEEEECC
T ss_conf 664154047646788899999999999889--999999999999999730510128610455799983300579999567
Q ss_pred -CCHHHHHHHHHHCCEEEE----ECC----------------------CCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf -998999999996898996----268----------------------9889955898688999999999999999
Q gi|254780432|r 339 -FSPALLAAKFRDECLLTA----PSS----------------------DNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 339 -~~~~~~~~~l~~~Gll~~----~~~----------------------~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
.+...+.+.|.++||-+. |.+ ++.|.+=-.-.+|++|++.+++.|.+-+
T Consensus 299 ~~~Rd~l~~~L~~~gI~t~~~y~Plh~~p~~~~~~~~~~~~p~se~~~~~~lsLP~~~~Lt~~di~~I~~~ik~ff 374 (375)
T PRK11706 299 IEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTPVEQRTVIATLLNFF 374 (375)
T ss_pred HHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 7789999999998799832447344249988970877799989999984889887899889999999999999984
No 214
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.18 E-value=4.3e-10 Score=86.46 Aligned_cols=282 Identities=13% Similarity=0.190 Sum_probs=168.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 506875781899999865201013331235655540356777-6654320013478600234354656543212345532
Q gi|254780432|r 66 HVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIK-TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 66 ~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aik-lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
+.-.+..||....|+++|...-+.+.++.+.||--|+.+++- ++ ++|. .||+-+..|.|.....-
T Consensus 56 ~~YsR~~nPT~~~lE~~la~LEg~~~a~~~~SGmaAis~~l~~ll--------~~Gd-~vv~~~~~YggT~~l~~----- 121 (398)
T PRK08249 56 HIYSRNTNPTVQALEAKVKELEGAEAATSFSTGMAAISNTLYTFL--------SPGD-RVVSIKDTYGGTNKIFE----- 121 (398)
T ss_pred CEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH--------CCCC-EEEECCCCCHHHHHHHH-----
T ss_conf 514089886599999999998299708996478999999999971--------8999-89981898437999999-----
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 11347999864333222100268875410123322223332222112462101232211022345721310110034444
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
.....++- .+..++..|.+.+++.+.++...|++|+.-.-. ...++ ++++.++|+++|+++|+|-..+
T Consensus 122 -~~l~~~Gi---~v~fvd~~d~~~~~~ai~~~Tklv~~EtpsNP~-l~v~D---i~~ia~iA~~~g~~~vVDNTfa---- 189 (398)
T PRK08249 122 -EFLPRMGV---DVTLCETGDHEQIEREIAKGCDLLYLETPTNPT-LKITD---IRRLSAAAHEVGALVVVDNTFA---- 189 (398)
T ss_pred -HHHCCCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CEEEC---HHHHHHHHHHCCCEEEEECCCC----
T ss_conf -76015986---999879998699998558886189984489997-46664---7999999987499699847742----
Q ss_pred CCCCCCCCCCCCCCCEEE--CCCCCCC-CCCC-CCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHH--CCC
Q ss_conf 555310111245453021--0344444-4344-32100011122222332--23453211110012334554320--122
Q gi|254780432|r 225 TGKLFAYEWANVKPDIMT--IAKGMGG-GFPI-GACLATNEVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQ--SDG 296 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~~--~gK~l~g-G~P~-sav~~~~~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~--~~~ 296 (392)
..+.+.-...=.||++ ..|-|+| |=-+ |++++++++++.+.... .|.+- +|..|.-.+..|+-+. =+.
T Consensus 190 --tP~~~~Pl~~GaDivvhS~TKyi~GHsDvlgGvv~~~~~~~~~l~~~~~~~G~~l--sP~~a~L~~RGL~TL~lRm~r 265 (398)
T PRK08249 190 --TPINQNPLALGADLVVHSATKFLGGHADALGGVVCGPEALMAQVYHYREINGATL--DPFAAYLILRGMKTLALRVRQ 265 (398)
T ss_pred --HHHCCCCCCCCCCEEEECCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCC--CCHHHHHHHCCCCCHHHHHHH
T ss_conf --0312782115798799726620036876351056088999999999997048878--917789986468979999999
Q ss_pred CCCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHCC-EE---
Q ss_conf 210112100002688999988679707550------------------46400999872499899999999689-89---
Q gi|254780432|r 297 FLENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDEC-LL--- 354 (392)
Q Consensus 297 l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~G-ll--- 354 (392)
-.+|+.++. ++.++||. |..| +|-|-|++|++....+.. +++.++- ++
T Consensus 266 ~~~nA~~vA--------~~L~~hp~-V~~V~yPgL~s~p~h~la~~~~~g~gg~~sf~l~g~~~~~-~~f~~~l~l~~~a 335 (398)
T PRK08249 266 QQENAMALA--------EYLQTEPL-VEAVNYPGLPTHPNHAIAKAQMRGFGGMLSFALKGGMDTV-RRLLPRLQYAHRA 335 (398)
T ss_pred HHHHHHHHH--------HHHHHCCC-CCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCHHHH-HHHHHHCCCCEEC
T ss_conf 988999999--------99983998-0779899999996889999867999971179981899999-9999718805005
Q ss_pred ----------EEE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf ----------962-----------------6898899558986889999999999999999852
Q gi|254780432|r 355 ----------TAP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 355 ----------~~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
..| ..++.|||+. --|+.+++++-|+++|.++.
T Consensus 336 ~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlSv----GlEd~~DLi~DL~qAL~~ir 395 (398)
T PRK08249 336 ANLGAVETIVGPARTTSHVENTPEERAALGIPEGLVRISV----GIEDTEDLIADLAQAFASVR 395 (398)
T ss_pred CCCCCCCCEEECHHHCCCCCCCHHHHHHCCCCCCEEEEEE----ECCCHHHHHHHHHHHHHHHH
T ss_conf 5638766120281324763499999997698939499996----00999999999999999988
No 215
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.17 E-value=3.3e-10 Score=87.22 Aligned_cols=294 Identities=13% Similarity=0.125 Sum_probs=162.1
Q ss_pred EEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 64641022674357878999999999999731450687578189999986520101--3331235655540356777665
Q gi|254780432|r 33 PFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTAR 110 (392)
Q Consensus 33 ~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar 110 (392)
++|||+++. +++.. ++.+ ..|..+...+|.+.+.+..+ .+++...|+.+|.....++..
T Consensus 17 ~ilDfSsni--NP~~~------------~~~l----~rYPd~~~~~Lr~~iA~~~~v~~~~I~vgnGs~ElI~~l~~~~- 77 (332)
T PRK06425 17 RIIDFSANI--NDFMD------------IGDI----SIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSYI- 77 (332)
T ss_pred CCEEECCCC--CCCCC------------CCHH----HHCCCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHH-
T ss_conf 988878877--99998------------3156----4294998699999999886968673998220999999999986-
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----HHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 43200134786002343546565432123455321134799986433322210----02688754101233222233322
Q gi|254780432|r 111 RYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKF----CDLQSLKNQISNDTAAILIEPIQ 186 (392)
Q Consensus 111 ~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~----~d~~~l~~~~~~~iAavi~Epv~ 186 (392)
.+++ ++....+|---...+. ..|.. +..+|+ .+.+.+... ..+ ..+|.-|=-
T Consensus 78 -------~~~~--~~i~~PtF~~Y~~~a~-~~g~~------------~~~vp~~~~~~~~~~~~~~-~~~-lv~i~nPNN 133 (332)
T PRK06425 78 -------NVGN--IIIVEPNFNEYKGYAF-THGIR------------ISALPFNLINNNPEILNNY-NFD-LIFIVSPDN 133 (332)
T ss_pred -------CCCC--EEEECCCHHHHHHHHH-HCCCE------------EEEECCCCCCCCHHHHHCC-CCC-EEEEECCCC
T ss_conf -------8999--8996888899999999-86998------------9995743332588888458-989-899941817
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCC
Q ss_conf 2211246210123221102234572131011003444455531011124545302---1034444-44344321000111
Q gi|254780432|r 187 GEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNEV 262 (392)
Q Consensus 187 g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i 262 (392)
=. |. ..+++.+..+.+.|+++++++|+||-..-|-............--|.++ +|+|..| .|+-+|.+++.+++
T Consensus 134 PT-G~-~~~~~~l~~l~~~~~~~~~~vvvDEAY~ef~~~~~~~~~~l~~~~~NliVlRSfSK~~gLaGlRlGY~i~~~~~ 211 (332)
T PRK06425 134 PL-GN-LISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYN 211 (332)
T ss_pred CC-CC-CCCHHHHHHHHHHCCCCCCEEEEECHHHHHHCCCCHHHHHHHHCCCCEEEEEEHHHHHHCCCHHHEHHCCCHHH
T ss_conf 20-13-48999999999960526979999641356514663435777640798899920078761641433331089999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC----HHHHHCCHHHHHHHHHHHHCCCEEEEE-CCCEEEEEEEE
Q ss_conf 2222233223453211110012334554320122210----112100002688999988679707550-46400999872
Q gi|254780432|r 263 AACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLE----NVINIAKILFEGLTAIKNRFPNMFLEV-RGQGLLIGLKT 337 (392)
Q Consensus 263 ~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~----~~~~~g~~l~~~L~~l~~~~~~~v~~v-RG~Gl~~~ie~ 337 (392)
++.+..... .|+-|..+.+++ +.+ +.+.+.+ .+++.-+++.+.|+++ ++ ..+ -...-++-+..
T Consensus 212 i~~l~~~~~--p~~v~~~a~~~~-~a~---~~~~~~~~~~~~~~~~r~~l~~~L~~~-----g~-~~~~~~~aNFil~~~ 279 (332)
T PRK06425 212 MKISRKITE--PWSVCDPAIDFI-RSI---DLDYVAKHSLDIMENERSYLINNLEAM-----GF-RAAGDPSANFITFMI 279 (332)
T ss_pred HHHHHHCCC--CCCCHHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHC-----CC-EECCCCCCEEEEEEC
T ss_conf 999997048--987389999999-996---319999999999999999999999977-----79-788999704899967
Q ss_pred CCCHHHHHHHHHHCCEEEEECC------CCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 4998999999996898996268------9889955898688999999999999999
Q gi|254780432|r 338 VFSPALLAAKFRDECLLTAPSS------DNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 338 ~~~~~~~~~~l~~~Gll~~~~~------~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
. +...+.++|+++|++++.+. ++.+|++ +=|.+|-+++++.|++.|
T Consensus 280 ~-~a~~l~~~L~~~gIlVR~~~~~~~l~~~~iRis---vgt~~eN~~ll~aLk~~L 331 (332)
T PRK06425 280 P-DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIA---IRRRSFNIKLVNALRNFL 331 (332)
T ss_pred C-CHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEE---CCCHHHHHHHHHHHHHHH
T ss_conf 9-999999999969919998899898899999997---899999999999999975
No 216
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.17 E-value=6.2e-10 Score=85.41 Aligned_cols=280 Identities=11% Similarity=0.090 Sum_probs=168.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101333123565554035677766543200134786002343546565432123455321134
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYL 148 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~ 148 (392)
.+..||....|+++|...-+...++.+.||--|+.+++--.- ++|. .||+-+..|.|.....- ...
T Consensus 59 ~R~~NPT~~~lE~~la~LEgg~~a~~~sSGmaAi~~~ll~~l-------~~Gd-hiv~~~~~YggT~~l~~------~~l 124 (392)
T PRK05967 59 GTRGTPTTDALCKAIDALEGSAGTILVPSGLAAVTVPLLGFL-------SAGD-HALIVDSVYYPTRHFAD------TML 124 (392)
T ss_pred ECCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHH-------CCCC-EEEECCCCCCHHHHHHH------HHH
T ss_conf 589887799999999998099877994577999999999973-------8998-89944898445899999------987
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 79998643332221002688754101233222233322221124621012322110223457213101100344445553
Q gi|254780432|r 149 EGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKL 228 (392)
Q Consensus 149 ~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~ 228 (392)
..++ -.+..++..|.+.+++.+.++.-.|++|..-.-. ...++ ++.+.++|+++|+++|+|-+.. ..
T Consensus 125 ~~~G---i~v~~vd~~~~~~~~~~i~~~Tklv~~Etp~NP~-l~v~D---i~~ia~~A~~~g~~~vVDNTfa------tP 191 (392)
T PRK05967 125 KRLG---VEVEYYDPEIGAGIEKLMRPNTKVVFTESPGSNT-FEIQD---IPAIAEAAHRHGAIVMMDNTWA------TP 191 (392)
T ss_pred HHCC---EEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CEEEC---HHHHHHHHHHCCCEEEEECCCC------CC
T ss_conf 6368---6999988999999997448786599985589986-45535---4999999987698799617754------53
Q ss_pred CCCCCCCCCCCEEE--CCCCCCC-C-CCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHH--CCCCCCH
Q ss_conf 10111245453021--0344444-4-3443210001112222233--223453211110012334554320--1222101
Q gi|254780432|r 229 FAYEWANVKPDIMT--IAKGMGG-G-FPIGACLATNEVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQ--SDGFLEN 300 (392)
Q Consensus 229 f~~e~~gi~PDi~~--~gK~l~g-G-~P~sav~~~~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~--~~~l~~~ 300 (392)
+.++-...=.||++ ..|-|+| | .-.|+|+++++..+.+... ..|.+. +|..|.-.+..|+-+. =+.-.+|
T Consensus 192 ~~~~Pl~~GADiVvhS~TKyl~GHsDvl~G~v~~~~~~~~~l~~~~~~~G~~l--~P~~a~l~lrGl~TL~lRm~r~~~n 269 (392)
T PRK05967 192 LYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCA--GPDDTYQILRGLRTMGIRLEHHRKS 269 (392)
T ss_pred CEECCCCCCCCEEEEECCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCC--CHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 42145655686899966646668875204323377788899999987504667--9788899871776099999999998
Q ss_pred HHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHCC-EE-------
Q ss_conf 12100002688999988679707550------------------46400999872499899999999689-89-------
Q gi|254780432|r 301 VINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDEC-LL------- 354 (392)
Q Consensus 301 ~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~G-ll------- 354 (392)
+.++. ++.+.||. |..| +|.|-|+++++.........++.++- ++
T Consensus 270 A~~lA--------~~L~~hp~-V~~V~yPgL~shp~h~la~~~~~g~gg~~sf~l~~g~~~~~~~f~~~l~l~~~a~SlG 340 (392)
T PRK05967 270 ALEIA--------RWLEGRPM-VARVLHPALPSHPGHEIWKRDFSGASGIFSFVLAAGGHAQAHAFLDALEIFGLGYSWG 340 (392)
T ss_pred HHHHH--------HHHHHCCC-CCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEECCCC
T ss_conf 99999--------99971999-7689799988994499999856689738999992683999999998287165731557
Q ss_pred -----EE------------ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -----96------------2689889955898688999999999999999985
Q gi|254780432|r 355 -----TA------------PSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 355 -----~~------------~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+. ...++.||++. --|+++++++=|+++|..-
T Consensus 341 g~eSL~~h~~~~~~~~~~~~~~~~liRlSV----GlEd~~DLi~DL~qAL~aa 389 (392)
T PRK05967 341 GYESLALHVKLGDRTVAKNPYAGPVIRLQI----GLEDVPDLKADLERGFAAA 389 (392)
T ss_pred CCHHEEECCCCCHHHHHHCCCCCCEEEEEE----CCCCHHHHHHHHHHHHHHH
T ss_conf 700202688899899974799989899994----4099999999999999973
No 217
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.17 E-value=6.7e-11 Score=91.72 Aligned_cols=281 Identities=13% Similarity=0.128 Sum_probs=168.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101333123565554035677766543200134786002343546565432123455321134
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYL 148 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~ 148 (392)
.++.||....|+++|...-+.+.+..+.||--|+-+++- +.. ++| ..||+-+..|.|.....- ...
T Consensus 56 sR~~NPT~~~lE~~la~LEgg~~a~~~~SGmaAi~~~ll-~ll------~~G-dhiv~~~~~YggT~~l~~------~~l 121 (394)
T PRK09028 56 GRRGTPTHFAFQAAIAELEGGAGTALYPSGAAAISNALL-SFL------KAG-DHLLMVDSCYEPTRDLCD------KIL 121 (394)
T ss_pred ECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH-HHH------CCC-CEEECCCCCCCCHHHHHH------HHH
T ss_conf 799887799999999998199877984599999999999-984------799-878706998627799999------888
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 79998643332221002688754101233222233322221124621012322110223457213101100344445553
Q gi|254780432|r 149 EGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKL 228 (392)
Q Consensus 149 ~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~ 228 (392)
..++- .+..++..|.+.+++.+.++.-.|++|..-.- -...++ ++++.++|+++|+++|+|-+.+ | .
T Consensus 122 ~~~Gi---~v~~vd~~~~~~~~~~i~~~Tklv~~EtpsNP-~l~v~D---i~~ia~iA~~~g~~~vVDNTfa----t--P 188 (394)
T PRK09028 122 AGFGI---ETTYYDPMIGEGIRELIRPNTKVLFLESPGSI-TMEVQD---VPTLSRIAHEHDIVVMLDNTWA----S--P 188 (394)
T ss_pred HHCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCC-CCCCCC---HHHHHHHHHHCCCEEEECCCCC----C--H
T ss_conf 65674---79995799989998536877269999558998-752368---9999999998398799637643----1--2
Q ss_pred CCCCCCCCCCCEEE--CCCCCCC-C-CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHH--CCCCCCH
Q ss_conf 10111245453021--0344444-4-34432100011122222332--23453211110012334554320--1222101
Q gi|254780432|r 229 FAYEWANVKPDIMT--IAKGMGG-G-FPIGACLATNEVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQ--SDGFLEN 300 (392)
Q Consensus 229 f~~e~~gi~PDi~~--~gK~l~g-G-~P~sav~~~~~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~--~~~l~~~ 300 (392)
+.+.-.+.=.||++ ..|-|+| | .-.|+|+++++..+.+.... .|.+. +|..|.-.+..|+-+. =+.-.+|
T Consensus 189 ~~~~Pl~~GaDivvhS~TKyi~GHsDv~~G~v~~~~~~~~~l~~~~~~~G~~~--sP~~a~L~lRGL~TL~lRm~r~~~n 266 (394)
T PRK09028 189 INSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREQSYLMGQCT--SPDDVYLAARGLRTLGVRLAQHEKN 266 (394)
T ss_pred HCCCCHHCCCCEEEEECCCEECCCCCCCCEEEECCHHHHHHHHHHHHHHCCCC--CHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 20682120798899827701048877403167468899999999998716778--8789999983678599999999999
Q ss_pred HHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHC-CE--------
Q ss_conf 12100002688999988679707550------------------4640099987249989999999968-98--------
Q gi|254780432|r 301 VINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDE-CL-------- 353 (392)
Q Consensus 301 ~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~-Gl-------- 353 (392)
+.++. ++.++||. |..| +|-|-|++|++......-.+++.+. -+
T Consensus 267 A~~vA--------~~L~~hp~-V~~V~yPgL~shp~h~la~r~~~g~gg~~sf~l~~g~~~~~~~f~~~L~lf~~a~SlG 337 (394)
T PRK09028 267 ALKVA--------NWLATRPE-VDHLRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHFKMGFSWG 337 (394)
T ss_pred HHHHH--------HHHHCCCC-CCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEECCC
T ss_conf 99999--------99860999-8789888998894489999867799869999981699999999998488275711689
Q ss_pred -----EEEEC-------------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -----99626-------------898899558986889999999999999999852
Q gi|254780432|r 354 -----LTAPS-------------SDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 354 -----l~~~~-------------~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+..|. .++.||++- --|+++++++=|+++|.++.
T Consensus 338 g~eSLi~~p~~~~~~~~~~~~~~~~~lvRlSV----GlEd~eDLi~DL~qAL~k~~ 389 (394)
T PRK09028 338 GFESLILGPFGINKLRTATNWDFSKPLIRLHI----GLEDVDDLIADLEAGFERYN 389 (394)
T ss_pred CCCCEEECCCCCCCHHHHHCCCCCCCEEEEEE----CCCCHHHHHHHHHHHHHHHH
T ss_conf 87540788887674223203589999799994----10998999999999999855
No 218
>TIGR01326 OAH_OAS_sulfhy O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; InterPro: IPR006235 This family of sequences is a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine sulfhydrylase (OAH, 2.5.1.49 from EC) and O-acetylserine sulfhydrylase (OAS, 2.5.1.47 from EC). An alternate name for OAH sulfhydrylase is homocysteine synthase.; GO: 0016765 transferase activity transferring alkyl or aryl (other than methyl) groups, 0006520 amino acid metabolic process.
Probab=99.17 E-value=2.2e-11 Score=94.85 Aligned_cols=286 Identities=17% Similarity=0.225 Sum_probs=184.3
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCC
Q ss_conf 97314506875781899999865201013331235655540356777-6654320013478600234354656543-212
Q gi|254780432|r 61 SEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIK-TARRYHYMAGKTNKFRIVTFEGAFHGRT-LAT 138 (392)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aik-lar~~~~~~g~t~r~~ii~~~~~yHG~t-~~a 138 (392)
|+...++-++..||...-|++||...-|.--.+++.||--|.-.||- || ..| +-|||-..=|=|.. +..
T Consensus 44 L~~~GnIYsRlmNPT~dVlE~RiAALEGGvaal~~ASG~AA~~~Ailnla--------~AG-DnIVsS~~LYGGTynLF~ 114 (434)
T TIGR01326 44 LQEAGNIYSRLMNPTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLA--------QAG-DNIVSSSYLYGGTYNLFK 114 (434)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEHHHCHHHHHHHHHHHHHH--------HCC-CCEEECCCCCCHHHHHHH
T ss_conf 11158700358883178998888642155000210115799999999997--------269-826980644422578999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC--CCEEEE
Q ss_conf 345532113479998643332221002-68875410123322223332222112462101232211022345--721310
Q gi|254780432|r 139 ISAGGKLQYLEGFGPKIEGFDQAKFCD-LQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDI--DALLIF 215 (392)
Q Consensus 139 ~s~s~~~~~~~~~~p~~~~~~~~~~~d-~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~--g~llI~ 215 (392)
.+ .+.+|- .+.++.-+| +|.+++.++++.=||.+|+|=.-... +|+ .+++.++++++ +|+||+
T Consensus 115 ~T-------lkrlGI---evrFvd~dd~pe~~~k~id~nTKAvf~EtIgNP~~~-v~D---ie~~a~~Ah~~PhgvPliV 180 (434)
T TIGR01326 115 HT-------LKRLGI---EVRFVDGDDDPEELEKAIDENTKAVFAETIGNPALN-VPD---IEAVAEVAHAHPHGVPLIV 180 (434)
T ss_pred HH-------HHHCCE---EEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCC-CCC---HHHHHHHHHHCCCCCEEEE
T ss_conf 95-------554481---488727888878999760667518984012387767-678---5899999986789834887
Q ss_pred CCCCCCCCCCCCCCCCC-CCCCCCCEEE--CCCCCCC-CCCCCCCCCCCCCC-CCCC------------CCCCCC----C
Q ss_conf 11003444455531011-1245453021--0344444-43443210001112-2222------------332234----5
Q gi|254780432|r 216 DEVQTGYGRTGKLFAYE-WANVKPDIMT--IAKGMGG-GFPIGACLATNEVA-ACMN------------QGSHGS----T 274 (392)
Q Consensus 216 DEV~tG~GRtG~~f~~e-~~gi~PDi~~--~gK~l~g-G~P~sav~~~~~i~-~~~~------------~~~~~~----T 274 (392)
|=+.. |+-+++.- .+|. |||+ ..|-||| |..||++++..-=. ++-+ |+-||- |
T Consensus 181 DNT~a----tpGYL~rPi~hGA--DIVvhSaTK~iGGHG~aiGG~ivD~G~FndW~~~~gkFP~f~~PdpsYHGl~f~E~ 254 (434)
T TIGR01326 181 DNTFA----TPGYLCRPIDHGA--DIVVHSATKYIGGHGTAIGGVIVDGGKFNDWANNPGKFPLFTTPDPSYHGLVFTET 254 (434)
T ss_pred ECCCC----CCCCCCCHHHCCC--CEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
T ss_conf 47868----7641006456498--67996100101263146504788267556301478747778888886587126531
Q ss_pred CC-CCCCCHHHHHHHHHH----------------------------HHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEE
Q ss_conf 32-111100123345543----------------------------2012221011210000268899998867970755
Q gi|254780432|r 275 YG-GNVLAMVLGEKVLNI----------------------------IQSDGFLENVINIAKILFEGLTAIKNRFPNMFLE 325 (392)
Q Consensus 275 ~~-gnpl~~aaa~a~L~~----------------------------l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~ 325 (392)
|+ ++|+++..+...++. |+=|.-.+|+.++.+ +.++||. |.-
T Consensus 255 ~g~~~~~G~~~~Afi~~~Rv~~LRD~Gaa~sPFnAFLllQGLETLsLR~ERH~~NA~kVA~--------fL~~Hp~-V~w 325 (434)
T TIGR01326 255 FGEFEGLGLGNIAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAE--------FLEAHPK-VAW 325 (434)
T ss_pred CCCCCCCCCCCHHEEEEEEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHCCCC-CCC
T ss_conf 5575777850000034446742210033401789999998666787678888899999999--------9727884-451
Q ss_pred E-------------------CC-CEEEEEEEECCC---HHHHHHHHH--H--------CCEEEEEC--------------
Q ss_conf 0-------------------46-400999872499---899999999--6--------89899626--------------
Q gi|254780432|r 326 V-------------------RG-QGLLIGLKTVFS---PALLAAKFR--D--------ECLLTAPS-------------- 358 (392)
Q Consensus 326 v-------------------RG-~Gl~~~ie~~~~---~~~~~~~l~--~--------~Gll~~~~-------------- 358 (392)
| +| .|..++||...- .+.+...++ . +-|.+.|.
T Consensus 326 V~YPGL~s~~~h~lAkkYl~~G~~G~vLsFe~kGG~ea~~kfidalkL~s~lANvGDaksLvIHPAsTTH~QL~e~Eq~~ 405 (434)
T TIGR01326 326 VNYPGLASHPHHALAKKYLPKGLFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLK 405 (434)
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHH
T ss_conf 34888788753788998741794267874132182889999987767787765542011103347756666579799985
Q ss_pred ---CCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf ---898899558986889999999999999999
Q gi|254780432|r 359 ---SDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 359 ---~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
.+..||++. --|.||++++=|+++|.
T Consensus 406 AGVt~~~iRlSv----GIE~iDDIiaDL~qAl~ 434 (434)
T TIGR01326 406 AGVTPGLIRLSV----GIENIDDIIADLEQALE 434 (434)
T ss_pred CCCCCCEEEEEE----ECCCHHHHHHHHHHHCC
T ss_conf 389757078987----21876789999998609
No 219
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.16 E-value=1.9e-09 Score=82.27 Aligned_cols=295 Identities=14% Similarity=0.163 Sum_probs=168.3
Q ss_pred CCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101--3331235655540356777665432001347860023435465654321234553211
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ 146 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~ 146 (392)
+.|..+...+|-+.|.+..+ .+.++.+|+.+|..+..++.- ..+|++.|+....+|---...+- +.|-..
T Consensus 52 ~RYPD~~~~~Lr~~lA~~~gv~~~~I~~GnGSdE~I~ll~~a~-------~~pg~d~vl~~~PtF~~Y~~~a~-~~g~~~ 123 (362)
T PRK04781 52 RRYPDPQPKGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRGL-------CVPERDAVLVTPPVFGMYAVCAR-LQNAPL 123 (362)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH-------HCCCCCEEEECCCCHHHHHHHHH-HCCCEE
T ss_conf 4798998899999999986869557998367899999999999-------55898548847974689999999-839879
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHH-HCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 3479998643332221002688754-1012332-2223332222112462101232211022345721310110034444
Q gi|254780432|r 147 YLEGFGPKIEGFDQAKFCDLQSLKN-QISNDTA-AILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 147 ~~~~~~p~~~~~~~~~~~d~~~l~~-~~~~~iA-avi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
..- |..+.... -..|++++.+ ....+.. .+|.-|=-=. |.. .+.+-+..+.+.|+. ++++|+||-..-|..
T Consensus 124 ~~v---pl~~~~~~-f~~d~~~~~~~~~~~~~klv~l~nPNNPT-G~~-~~~~~l~~~~~~~~~-~~lvvvDEAY~eF~~ 196 (362)
T PRK04781 124 VEV---PLVDGADG-FHADVPAIVAAALASNAKLVFLCSPSNPA-GSA-IALDQIETALQALQG-KALVVVDEAYGEFSD 196 (362)
T ss_pred EEE---ECCCCCCC-CCCCHHHHHHHHHCCCCCEEEECCCCCCC-CCC-CCHHHHHHHHHHCCC-CCEEEEECHHHHHCC
T ss_conf 999---57555124-67799999988526798889986898973-556-798999999975799-808998341655257
Q ss_pred CCCCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH
Q ss_conf 55531011124545302---1034444-4434432100011122222332234532111100123345543201222101
Q gi|254780432|r 225 TGKLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN 300 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~ 300 (392)
..-+.....--|.++ +|+|..| .|+-+|..+++.++.+.+.... ..|.-|.++.++|.++|+.-.-+...++
T Consensus 197 --~~s~~~l~~~~~NliVlRTfSK~ygLAGlRlGy~ia~~~~i~~l~k~~--~p~~v~~~a~~~a~~al~~~~~~~~~~~ 272 (362)
T PRK04781 197 --VPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQ--APYPVPTPCAAMAEQALSAPALAVTARR 272 (362)
T ss_pred --CCCHHHHHHCCCCEEEEECHHHHHHCCCCCEEEEECCHHHHHHHHHHC--CCCCCCHHHHHHHHHHHCCHHHHHHHHH
T ss_conf --843445765178545331405874075535044417999999999821--7988759999999999607669999999
Q ss_pred HHHHCCHHHHHHHHHHHHCCCEEEEE-CCCEEEEEEEECCCHHHHHHHHHHCCEEEEEC-----CCCEEEECCCCCCCHH
Q ss_conf 12100002688999988679707550-46400999872499899999999689899626-----8988995589868899
Q gi|254780432|r 301 VINIAKILFEGLTAIKNRFPNMFLEV-RGQGLLIGLKTVFSPALLAAKFRDECLLTAPS-----SDNVVRILPPLTITAE 374 (392)
Q Consensus 301 ~~~~g~~l~~~L~~l~~~~~~~v~~v-RG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~-----~~~~irl~Ppl~it~~ 374 (392)
+.++-. -+++|.+-..+.+++ ..| -..+-++-+++. +...+.+.++++|++++.. -++.+|++ +=|.+
T Consensus 273 v~~i~~-eR~~l~~~L~~l~g~-~~v~pS~aNFil~~~~-~a~~~~~~L~~~gIlVR~~~~~p~l~~~lRis---igt~e 346 (362)
T PRK04781 273 VAEVRA-ERERLHAALAQLPGV-RQVYPSQGNFLLVRFD-DAEAAFQALLAAGVVVRDQRAVPRLSDALRIT---IGTPE 346 (362)
T ss_pred HHHHHH-HHHHHHHHHHHCCCC-CEECCCCCEEEEEECC-CHHHHHHHHHHCCCEEEECCCCCCCCCEEEEE---ECCHH
T ss_conf 999999-999999999847898-5568998849998779-99999999994993997078878999979998---09999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780432|r 375 EIHEGLERIERTAI 388 (392)
Q Consensus 375 eid~~i~~l~~al~ 388 (392)
|-+++++.|++.+.
T Consensus 347 en~~ll~aL~~i~e 360 (362)
T PRK04781 347 QNDRVLAALQRTQE 360 (362)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999996
No 220
>PRK04311 selenocysteine synthase; Provisional
Probab=99.16 E-value=1.3e-09 Score=83.33 Aligned_cols=332 Identities=17% Similarity=0.155 Sum_probs=186.8
Q ss_pred EEEECHHHHHHHCCCCC--CHHHHHHHHHHHHHCCCCC----CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf 64641022674357878--9999999999997314506----87578189999986520101333123565554035677
Q gi|254780432|r 33 PFLDFASGIAVNSLGHS--HPELVAILKSQSEKLWHVS----NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAI 106 (392)
Q Consensus 33 ~yiD~~~g~~~~~lGh~--~p~i~~a~~~q~~~~~~~~----~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Ai 106 (392)
+.|..++-.--+|||-+ .++..+++.+.+..+...- ..-.......+++.|+..++.+-+...|+-+-|+-.++
T Consensus 82 ~VINaTGvvlHTNLGRapL~~~a~~~v~~~~~~YsnLE~dL~~G~RG~R~~~v~~ll~~ltgaE~a~vVNNNAaAv~L~l 161 (465)
T PRK04311 82 PVINATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCELTGAEDALVVNNNAAAVLLAL 161 (465)
T ss_pred EEEECCCEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH
T ss_conf 25634205754667777788999999999962872155220138898708999999998549873799828489999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-CCC
Q ss_conf 7665432001347860023435465654321234553211347999864333222100268875410123322223-332
Q gi|254780432|r 107 KTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI-EPI 185 (392)
Q Consensus 107 klar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~-Epv 185 (392)
.-- ..||..|||+-.- --..|+.-+ |...+.-+-.+..+-...--.+..+++.+.++.|+++- -|-
T Consensus 162 ~~l--------a~gkEviVSRGel--vEIGGsFRi---Pdim~~sGa~L~EVGtTNrT~l~DY~~AI~~~Ta~llkvH~S 228 (465)
T PRK04311 162 NAL--------AAGKEVIVSRGEL--VEIGGAFRI---PDVMRQAGAKLVEVGTTNRTHLRDYEDAINENTALLLKVHTS 228 (465)
T ss_pred HHH--------HCCCEEEEECCCE--EEECCCCCC---HHHHHHCCCEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECC
T ss_conf 986--------2798599964535--652676562---789986598887437678888799998649565489999568
Q ss_pred -CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC------------CCCEEECC--CCCCCC
Q ss_conf -222112462101232211022345721310110034444555310111245------------45302103--444444
Q gi|254780432|r 186 -QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV------------KPDIMTIA--KGMGGG 250 (392)
Q Consensus 186 -~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi------------~PDi~~~g--K~l~gG 250 (392)
.---|+..-++ ++.|.+++++||+++|.|- | +|.+.-...||+ -+|++||| |-|| |
T Consensus 229 N~~i~GFt~~v~--~~eL~~l~~~~~ip~~~Dl-----G-SG~l~~~~~~gl~~Ep~v~~~l~~GaDLVtFSGDKLLG-G 299 (465)
T PRK04311 229 NYRIVGFTKEVS--EAELAALGKEHGLPVVVDL-----G-SGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLG-G 299 (465)
T ss_pred CCCCCCCCCCCC--HHHHHHHHHHCCCCEEEEC-----C-CCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCC-C
T ss_conf 765467468899--9999999987599279988-----8-75213653126999998899997299889985540147-9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CC-------------HHHHHCCHHHHHHHHHH
Q ss_conf 34432100011122222332234532111100123345543201222-10-------------11210000268899998
Q gi|254780432|r 251 FPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGF-LE-------------NVINIAKILFEGLTAIK 316 (392)
Q Consensus 251 ~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l-~~-------------~~~~~g~~l~~~L~~l~ 316 (392)
-..|-+++++++.+.++.....=++.-..+..++-.++|+.+.+++- .+ ..+++.+.+...|++..
T Consensus 300 PQAGIIvGkk~lI~~lkknPL~RAlRvDKltLaaLeaTL~~Yl~~~~~~~~IP~l~mLt~~~~~L~~rA~~l~~~l~~~~ 379 (465)
T PRK04311 300 PQAGIIVGKKELIERLKKHPLKRALRVDKLTLAALEATLRLYLNPERLAEKIPTLRLLTRSPEELRARAERLAAALKAAL 379 (465)
T ss_pred CCCCEEECHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 85433740099999998687614232599999999999999959210001176899875999999999999999987425
Q ss_pred HHCCCEEEEE---CCCEEE-------EEEEEC---CCHHHHHHHHHHC--CEEEEECCCCEEEECCCCCCCHHHHHHHHH
Q ss_conf 8679707550---464009-------998724---9989999999968--989962689889955898688999999999
Q gi|254780432|r 317 NRFPNMFLEV---RGQGLL-------IGLKTV---FSPALLAAKFRDE--CLLTAPSSDNVVRILPPLTITAEEIHEGLE 381 (392)
Q Consensus 317 ~~~~~~v~~v---RG~Gl~-------~~ie~~---~~~~~~~~~l~~~--Gll~~~~~~~~irl~Ppl~it~~eid~~i~ 381 (392)
..+.--+.+. =|-|.| +++.+. .....+.++|++. -|+.+ ..++.+.|-+- ++.++|.+.+++
T Consensus 380 ~~~~v~i~~~~s~vGGGslP~~~lpS~~v~i~~~~~s~~~L~~~LR~~~~PII~R-I~~d~~~LDlR-Ti~~~d~~~i~~ 457 (465)
T PRK04311 380 GEFAVSVVPSFSQVGGGSLPVDRLPSAALTLTPKGRSLEALAARLRLLPPPVIGR-IEDGRLLLDLR-TLEEEDEEALAA 457 (465)
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEE-EECCEEEEEEC-CCCHHHHHHHHH
T ss_conf 7842899977664578878788788679998579999999999983699988999-98897999916-389789999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780432|r 382 RIERTAI 388 (392)
Q Consensus 382 ~l~~al~ 388 (392)
.|.+.+.
T Consensus 458 ~l~~il~ 464 (465)
T PRK04311 458 ALLELLN 464 (465)
T ss_pred HHHHHHH
T ss_conf 9999961
No 221
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.16 E-value=1.8e-09 Score=82.33 Aligned_cols=284 Identities=19% Similarity=0.242 Sum_probs=168.3
Q ss_pred CCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101--3331235655540356777665432001347860023435465654321234553211
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ 146 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~ 146 (392)
+.|..+...+|.+.|.+..+ .+.+..+|+.+|..+..++.-- .+|+..|+....+|---...+.......
T Consensus 48 nRYPD~~~~~L~~~lA~~~~v~~~~Ii~gnGSde~I~~i~~af~-------~pg~d~vl~~~PtF~~Y~~~a~~~g~~~- 119 (346)
T PRK04635 48 NRYSECQPKELIQAYAAYAGVKPEQVLTSRGADEGIELLIRAFC-------EPNQDAILYCPPTYGMYAISAETIGVER- 119 (346)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHH-------CCCCCEEEECCCCHHHHHHHHHHCCCEE-
T ss_conf 67999888999999999968696689984889999999999984-------6999769977875699999997479679-
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 34799986433322210026887541012332222333222211246210123221102234572131011003444455
Q gi|254780432|r 147 YLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG 226 (392)
Q Consensus 147 ~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG 226 (392)
.. -|..+++ ..|++.+++.+.+.=..+|.-|=-=. |.. .+.+-++.+.+.|++ ++++|+||-..-|..-.
T Consensus 120 ~~---vpl~~d~----~~dl~~l~~~~~~~kli~l~NPNNPT-G~~-~~~~~l~~l~~~~~~-~~lvVvDEAY~ef~~~~ 189 (346)
T PRK04635 120 KT---VPLTSDW----QLDLPSIEANLDNVKLVFVCSPNNPT-GNL-VKRKDIISLLEMTKD-RAIVVMDEAYIDFCPEA 189 (346)
T ss_pred EE---EECCCCC----CCCHHHHHHHCCCCCEEEECCCCCCC-CCC-CCHHHHHHHHHHCCC-CCEEEEECCEECCCCCC
T ss_conf 99---7368565----77999998643487589977899987-644-899999999984875-65599874531036564
Q ss_pred CCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC---
Q ss_conf 531011124545302---1034444-443443210001112222233223453211110012334554320122210---
Q gi|254780432|r 227 KLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLE--- 299 (392)
Q Consensus 227 ~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~--- 299 (392)
. ..+...--|.++ +|+|+.| .|+-+|..++++++++.+.... ..|.-|.++.++|.++|+. .++.+
T Consensus 190 s--~~~l~~~~~NliVlRTfSK~~gLaGlRlGY~ia~~~~i~~l~k~~--~p~~v~~~a~~~a~~al~~---~~~~~~~~ 262 (346)
T PRK04635 190 S--TVDLLAQYPNLAILRTLSKAFALAGLRCGFTLANEELINVLLKVI--APYPVPVPVAEIATQALSE---AGLARAKF 262 (346)
T ss_pred C--HHHHHHHCCCEEEEECHHHHHCCCCCCCEEECCCHHHHHHHHHHH--CCCCCCHHHHHHHHHHHHH---HHHHHHHH
T ss_conf 4--678986088168750567874065411141007999999999840--8988889999999999730---78999999
Q ss_pred HHHHH---CCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECC-CCEEEECCCCCCCHHH
Q ss_conf 11210---0002688999988679707550464009998724998999999996898996268-9889955898688999
Q gi|254780432|r 300 NVINI---AKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSS-DNVVRILPPLTITAEE 375 (392)
Q Consensus 300 ~~~~~---g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~-~~~irl~Ppl~it~~e 375 (392)
++... -+++..+|.. .++ +.-..+.+=++-+++. +...+.+.+.++|++++... ++.+|++ +=|++|
T Consensus 263 ~~~~~~~~r~~l~~~l~~----~~g-~~~~~s~aNFil~~~~-~~~~~~~~l~~~GI~VR~~~~~~~iRIS---vGt~eE 333 (346)
T PRK04635 263 QVLDLSANRAYLQAGLSM----LPG-VTVFEGWGNYLLVKFP-DGDALFKAAWDHGIILRNSPIENCVRIS---VGNREE 333 (346)
T ss_pred HHHHHHHHHHHHHHHHHH----CCC-CEECCCCCCEEEEECC-CHHHHHHHHHHCCEEECCCCCCCEEEEE---CCCHHH
T ss_conf 999999999999999986----799-0778998808999889-9999999998399598569999979995---399999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780432|r 376 IHEGLERIERT 386 (392)
Q Consensus 376 id~~i~~l~~a 386 (392)
.++++++|.+=
T Consensus 334 n~~~l~~lr~~ 344 (346)
T PRK04635 334 CEKTLGFIRNY 344 (346)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999998
No 222
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.16 E-value=1.8e-09 Score=82.40 Aligned_cols=338 Identities=16% Similarity=0.202 Sum_probs=205.6
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCC-----CCC-CCCCHHHHHHHHHHHHH----CCCCCCCCCCCC
Q ss_conf 79976464102267435787899999999999973145-----068-75781899999865201----013331235655
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWH-----VSN-LYQSTQQEIFANHLIHS----TFADRVFFTNSG 98 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~-----~~~-~~~~~~~~~la~~L~~~----~~~~~v~f~~SG 98 (392)
.+....+||..|.-... =.....+.+++.+.+..... ..+ ....+.+..+++.+... +..+.++.+++.
T Consensus 86 ~~~~~~i~f~~g~p~~~-~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~ 164 (459)
T COG1167 86 EDDPSVIDFAGGLPDPS-LFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGA 164 (459)
T ss_pred CCCCCCCCCCCCCCCCH-HCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEECCCH
T ss_conf 57875547688998810-18889999999999850561233226876888999999999999974998883038980649
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHCCC-C
Q ss_conf 5403567776654320013478600234354656543212345532113479998643332-2210026887541012-3
Q gi|254780432|r 99 AESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFD-QAKFCDLQSLKNQISN-D 176 (392)
Q Consensus 99 seA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~-~~~~~d~~~l~~~~~~-~ 176 (392)
..|.+..+++-- .+| +.|+.=+-+|+|.-...- ..+...-+++ +..--|.+++++.... +
T Consensus 165 q~al~l~~~~l~-------~pG-d~v~vE~PtY~~~~~~~~----------~~g~~~~~vp~d~~G~~~e~le~~~~~~~ 226 (459)
T COG1167 165 QQALDLLLRLLL-------DPG-DTVLVEDPTYPGALQALE----------ALGARVIPVPVDEDGIDPEALEEALAQWK 226 (459)
T ss_pred HHHHHHHHHHHC-------CCC-CEEEECCCCHHHHHHHHH----------HCCCCEEEECCCCCCCCHHHHHHHHHCCC
T ss_conf 999999999847-------999-999989998289999999----------86994786067888989799999985069
Q ss_pred CCCCCCCCC-CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CCCCCCCCCC----EEECCCCCCCC
Q ss_conf 322223332-22211246210123221102234572131011003444455531-0111245453----02103444444
Q gi|254780432|r 177 TAAILIEPI-QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AYEWANVKPD----IMTIAKGMGGG 250 (392)
Q Consensus 177 iAavi~Epv-~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~e~~gi~PD----i~~~gK~l~gG 250 (392)
+-++.+-|- |.--|.. .|.+==++|-++|++||+.+|=|++..=|.-.+..- ....++ .|+ +-+|||.|.-|
T Consensus 227 ~k~~y~~P~~qNPtG~t-ms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld-~~~rViy~gSFSK~l~Pg 304 (459)
T COG1167 227 PKAVYVTPTFQNPTGVT-MSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALD-APGRVIYLGSFSKTLAPG 304 (459)
T ss_pred CCEEEECCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCHHHHC-CCCCEEEECCCHHHHCCC
T ss_conf 72899788963889874-5999999999999975987998677433215889983457628-999789991326651467
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHH----HHHCCCEEEEE
Q ss_conf 34432100011122222332234532111100123345543201222101121000026889999----88679707550
Q gi|254780432|r 251 FPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAI----KNRFPNMFLEV 326 (392)
Q Consensus 251 ~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l----~~~~~~~v~~v 326 (392)
+=+|.+++.+++.+.+....+..+...+++.-.+.... +.+..+.++++++-+.+.++.+.+ .+-.++.+.-.
T Consensus 305 lRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~---l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~ 381 (459)
T COG1167 305 LRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAF---LLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWT 381 (459)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 55499972999999999998762569989999999999---972859999999999999999999999997478763772
Q ss_pred CC-CEEEEEEEECC--CHHHHHHHHHHCCEEEEECC---------CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 46-40099987249--98999999996898996268---------98899558986889999999999999999852
Q gi|254780432|r 327 RG-QGLLIGLKTVF--SPALLAAKFRDECLLTAPSS---------DNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 327 RG-~Gl~~~ie~~~--~~~~~~~~l~~~Gll~~~~~---------~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+. -|+++-+++.. +...+.+++.++|+.+.+.+ .|.+||..+. .++++|++++++|.+++.+..
T Consensus 382 ~p~gG~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 382 RPEGGLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS-PSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEECCC-CCHHHHHHHHHHHHHHHHHHH
T ss_conf 6995589999869988889999999986997945886635789889828998898-999999999999999999762
No 223
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.16 E-value=7.9e-10 Score=84.73 Aligned_cols=302 Identities=14% Similarity=0.150 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999999999731450687578189999986520101333123565554035677766543200134786002343546
Q gi|254780432|r 51 PELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGA 130 (392)
Q Consensus 51 p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~ 130 (392)
++-++++.+.+++.+.+ ..+...+|++++++..+...+..++|||.|.+.|++..- . .+| ..||+-.-+
T Consensus 14 ~~e~~~v~~~l~sg~~~----~G~~v~~FE~~~a~~~g~k~av~v~sgT~AL~lal~al~-i-----~~g-deVi~p~~t 82 (379)
T PRK11658 14 DEEIAAVKEVLRSGWIT----TGPKNQELEQAFCQLTGNQHAIAVSSATAGMHITLMALG-I-----GPG-DEVITPSQT 82 (379)
T ss_pred HHHHHHHHHHHHCCCCC----CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCC-C-----CCC-CEEEECCCC
T ss_conf 99999999999669867----887799999999999786949997688999999999869-8-----883-999989955
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 5654321234553211347999864333222100-268875410123322223332222112462101232211022345
Q gi|254780432|r 131 FHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFC-DLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDI 209 (392)
Q Consensus 131 yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~-d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~ 209 (392)
|-. |-+.-.+.+..|...+++...++ |.+.+++.+.+++-|||.=.+.|. |.+ +.+++++|++|
T Consensus 83 f~a--------t~~ai~~~Ga~pvf~Did~~t~~id~~~~e~~it~~tkaIi~Vh~~G~------~~d-~~~i~~i~~~~ 147 (379)
T PRK11658 83 WVS--------TLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPVHYAGA------PAD-LDAIRAIGERY 147 (379)
T ss_pred HHH--------HHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCC------CCC-HHHHHHHHHHC
T ss_conf 699--------999999819989974574565354889998654826549998568898------663-77999999975
Q ss_pred CCEEEECCCCCCCCCC--CCCCCCCCCCCCCCEEEC----CCCCCCCCCCCCCCCCCC-CCCCCCCCC------------
Q ss_conf 7213101100344445--553101112454530210----344444434432100011-122222332------------
Q gi|254780432|r 210 DALLIFDEVQTGYGRT--GKLFAYEWANVKPDIMTI----AKGMGGGFPIGACLATNE-VAACMNQGS------------ 270 (392)
Q Consensus 210 g~llI~DEV~tG~GRt--G~~f~~e~~gi~PDi~~~----gK~l~gG~P~sav~~~~~-i~~~~~~~~------------ 270 (392)
|+.+|-|=-|+ ||-+ |+.-+. +|+ .|+ .|.|+.| --|+++++++ +++.+....
T Consensus 148 ~i~vIEDaA~a-~Ga~~~g~~~Gs--~g~----a~fSF~~~K~ittG-eGG~ivtnd~~l~~~~r~lr~hG~~~~~~~~~ 219 (379)
T PRK11658 148 GIPVIEDAAHA-VGTYYKGRHIGA--RGT----AIFSFHAIKNITCA-EGGLIVTDDEELADRLRMLKFHGLGVDAYDRQ 219 (379)
T ss_pred CCEEEECCHHH-HCCCCCCCCCCC--CCC----EEEECCCCCCCCCC-CCEEEEECCHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 98189708355-366547986676--244----57856666678777-87499969999999999999779886513443
Q ss_pred ------------CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCC--EEEEEEE
Q ss_conf ------------23453211110012334554320122210112100002688999988679707550464--0099987
Q gi|254780432|r 271 ------------HGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQ--GLLIGLK 336 (392)
Q Consensus 271 ------------~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~--Gl~~~ie 336 (392)
.|.-|..+.+.+|.+++-|+.+++ ++++-+++.++..+.|..+...... ..+.... -.++.+.
T Consensus 220 ~~g~~~~~~~~~~G~N~rm~elqAAigl~qL~~ld~--~~~~R~~ia~~Y~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~ 296 (379)
T PRK11658 220 TQGRAPQAEVLEPGYKYNLADINAAIALVQLQKLEA--LNARRRAIAAQYLQALAALPFQPLS-LPAWPHQHAWHLFIIR 296 (379)
T ss_pred CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCCCEEEEEEE
T ss_conf 037888622665561367777879999999999999--9999999999999972689986667-8898874110789999
Q ss_pred ECC-----CHHHHHHHHHHCCEEEEEC----C---------------------CCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 249-----9899999999689899626----8---------------------988995589868899999999999999
Q gi|254780432|r 337 TVF-----SPALLAAKFRDECLLTAPS----S---------------------DNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 337 ~~~-----~~~~~~~~l~~~Gll~~~~----~---------------------~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
+.. +...+.+.|.++||-+... + .+.|.|=-.-.+|++|++++++.|.+.
T Consensus 297 ~~~~~~~~~Rd~l~~~L~~~gI~t~~~y~p~h~~~~~~~~~~~~~lpnae~~~~~~lsLP~~~~Lt~~di~~Ii~~ik~i 376 (379)
T PRK11658 297 VDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDSDVDRVITALQQI 376 (379)
T ss_pred ECHHHCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 86463544899999999977998120274200489888159878998999998488989899897999999999999999
Q ss_pred HHH
Q ss_conf 998
Q gi|254780432|r 387 AIK 389 (392)
Q Consensus 387 l~~ 389 (392)
+.+
T Consensus 377 ~~q 379 (379)
T PRK11658 377 AGQ 379 (379)
T ss_pred HCC
T ss_conf 773
No 224
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.16 E-value=5.7e-10 Score=85.64 Aligned_cols=282 Identities=16% Similarity=0.169 Sum_probs=166.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 50687578189999986520101333123565554035677766543200134786002343546565432123455321
Q gi|254780432|r 66 HVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL 145 (392)
Q Consensus 66 ~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~ 145 (392)
+.-.+..||....|+++|.+.-+.+.++.+.||--|+.+++- +.. ++|. .||+-++.|-|.....-
T Consensus 57 ~~YsR~~nPT~~~lE~~la~LEg~~~a~~~sSGmaAi~~~l~-~~l------~~Gd-hiv~~~~~YGgt~~l~~------ 122 (403)
T PRK07503 57 HFYSRISNPTLALLEQRMASLEGGEAGLALASGMGAITATLW-TLL------RPGD-EVIVGRTLYGCTFAFLH------ 122 (403)
T ss_pred CEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-HHC------CCCC-EEEECCCCCCCHHHHHH------
T ss_conf 513089885699999999998499648886278999999999-965------9999-89976887532899998------
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 13479998643332221002688754101233222233322221124621012322110223457213101100344445
Q gi|254780432|r 146 QYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRT 225 (392)
Q Consensus 146 ~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRt 225 (392)
.....++- .+..+...|.+.+++.+.++...|++|..-.--. ..++ ++++.++|+++|+++|+|-+..
T Consensus 123 ~~l~~~Gi---~~~~vd~~d~~~~~~ai~~~Tkli~~Etp~NP~l-~v~D---i~~ia~iA~~~g~~~vVDNTfa----- 190 (403)
T PRK07503 123 HGLGEFGV---KVRHVDLTDAKALKAAISEKTRMIYFETPANPNM-QLVD---IAAVVEAARGHDALVVVDNTYC----- 190 (403)
T ss_pred HHHHHCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCC-EEEC---HHHHHHHHHHCCCEEEEECCCC-----
T ss_conf 44631775---9998689898999975186732999952799986-6305---7999999986588599836754-----
Q ss_pred CCCCCCCCCCCCCCEEE--CCCCCCCC--CCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCHHHHHHHHHHHH--CC
Q ss_conf 55310111245453021--03444444--3443210001112222233----223453211110012334554320--12
Q gi|254780432|r 226 GKLFAYEWANVKPDIMT--IAKGMGGG--FPIGACLATNEVAACMNQG----SHGSTYGGNVLAMVLGEKVLNIIQ--SD 295 (392)
Q Consensus 226 G~~f~~e~~gi~PDi~~--~gK~l~gG--~P~sav~~~~~i~~~~~~~----~~~~T~~gnpl~~aaa~a~L~~l~--~~ 295 (392)
..+.+.-...=.||++ ..|-|+|- .-.|+|+++++.+....-. ..|.+- +|..|.-.+..|+-+. =+
T Consensus 191 -tP~~~~Pl~~GaDivvhS~TKYi~GHsD~l~G~v~~~~~~~~~~r~~~~~~~~G~~l--sP~da~L~lRGL~TL~lRm~ 267 (403)
T PRK07503 191 -TPYLQRPLELGADLVVHSATKYLSGHGDITAGLVVGGKALVDRIRLEGLKDMTGAVL--SPHDASLLMRGLKTLALRMD 267 (403)
T ss_pred -CCCCCCHHHCCCCEEEEECCEEECCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCC--CHHHHHHHHCCCCCHHHHHH
T ss_conf -514016133189889995450313787605579972617889999999987428868--86888998646775999999
Q ss_pred CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHC-CEE--
Q ss_conf 2210112100002688999988679707550------------------4640099987249989999999968-989--
Q gi|254780432|r 296 GFLENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDE-CLL-- 354 (392)
Q Consensus 296 ~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~-Gll-- 354 (392)
.-.+|+.++. ++.++||. |..| +|-|-|++|++....+.. .++.+. -++
T Consensus 268 ~~~~nA~~lA--------~~L~~hp~-V~~V~yPgL~shp~h~la~~q~~g~gg~~sf~l~g~~~~~-~~f~~~L~lf~~ 337 (403)
T PRK07503 268 RHCANAQQVA--------EFLARQPA-VELVHYPGLPSFAQHALAQRQMRLPGGMIAFELKGGIEAG-RRFMNALQLFAR 337 (403)
T ss_pred HHHHHHHHHH--------HHHHHCCC-CCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHH-HHHHHHCCCCEE
T ss_conf 9999999999--------99974899-5589898888980189999867899836899966989999-999980894655
Q ss_pred -----------EEE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -----------962-----------------689889955898688999999999999999985
Q gi|254780432|r 355 -----------TAP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 355 -----------~~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
..| ..++.|||+. --|+.+++++=|+++|..+
T Consensus 338 a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~liRlSV----GlEd~~DLi~DL~qAL~a~ 397 (403)
T PRK07503 338 AVSLGDAESLAQHPASMTHSTYTPEERAHHGISEGLVRLSV----GLEDVEDLLADIAQALDAC 397 (403)
T ss_pred ECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE----CCCCHHHHHHHHHHHHHHH
T ss_conf 31667754032476334665599999986698939699986----0189999999999999973
No 225
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.15 E-value=1.6e-09 Score=82.66 Aligned_cols=317 Identities=20% Similarity=0.269 Sum_probs=195.3
Q ss_pred HHCCCCC----CHHHHHHHHHHHHHCCCCCCCCCCHH--------HHHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHH
Q ss_conf 4357878----99999999999973145068757818--------9999986520101333123-565554035677766
Q gi|254780432|r 43 VNSLGHS----HPELVAILKSQSEKLWHVSNLYQSTQ--------QEIFANHLIHSTFADRVFF-TNSGAESVECAIKTA 109 (392)
Q Consensus 43 ~~~lGh~----~p~i~~a~~~q~~~~~~~~~~~~~~~--------~~~la~~L~~~~~~~~v~f-~~SGseA~e~Aikla 109 (392)
...||-| ||++.+.+.. +..+....+ |+.+. --+|.+.|++.+|+|.+-+ .++|+.+-=+.+.++
T Consensus 74 ~~pLGSCTMKyNp~~~e~~a~-~p~f~~~HP-~qp~~~~QG~Lq~i~elq~~L~eITGmd~vSlqP~aGAqGE~aGll~I 151 (490)
T PRK04366 74 FYPLGSCTMKYNPKINEKVAR-LPGFAELHP-LQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLII 151 (490)
T ss_pred CEECCCCCCCCCHHHHHHHHC-CHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHH
T ss_conf 305651215448798857742-843552699-998788899999999999999998599858406898559999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 54320013478600234354656543212345532113479998643332221002688754101233222233322221
Q gi|254780432|r 110 RRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEG 189 (392)
Q Consensus 110 r~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~ 189 (392)
|+|+..+|.++|++||.- .+-||.--++-++.| |....-.....-.-|+++|++.+.+++||+.+.- .+.-
T Consensus 152 rayh~~~G~~~R~~vLiP-~SAHGTNPAsA~maG-------~~Vv~v~~~~~G~vDle~Lka~~~~~~A~lMiTn-Pnt~ 222 (490)
T PRK04366 152 RAYHEARGDTKRTEVIVP-DSAHGTNPASAAMAG-------FKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTN-PNTL 222 (490)
T ss_pred HHHHHHCCCCCCCEEEEE-CCCCCCCHHHHHHCC-------CEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEC-CCCC
T ss_conf 999997598577679985-556789878887559-------4468825798998199999998753103135515-7653
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCEEEECCC----CCCCCCCCCCCCCCCCCCCCCEE------ECCCCCCCCCC-CCCCCC
Q ss_conf 12462101232211022345721310110----03444455531011124545302------10344444434-432100
Q gi|254780432|r 190 GVRKVPEEFLQQLRKICDDIDALLIFDEV----QTGYGRTGKLFAYEWANVKPDIM------TIAKGMGGGFP-IGACLA 258 (392)
Q Consensus 190 G~~~~~~~~l~~l~~lc~~~g~llI~DEV----~tG~GRtG~~f~~e~~gi~PDi~------~~gK~l~gG~P-~sav~~ 258 (392)
|+... =++.+.++++++|.++..|-. +.|.-|-|.+ + -|++ ||+-.-|||=| .|.|.+
T Consensus 223 GvfE~---~i~ei~~ivH~~Ggl~Y~DGANlNAi~G~~rPgd~-G-------~Dv~HlNLHKTFstPHGGGGPG~Gpv~v 291 (490)
T PRK04366 223 GLFER---NIKEIAEIVHEAGGLLYYDGANLNAILGKVRPGDM-G-------FDVVHLNLHKTFSTPHGGGGPGSGPVGV 291 (490)
T ss_pred CCHHH---HHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHC-C-------CCEEEEECCCCCCCCCCCCCCCCCCEEH
T ss_conf 60224---89999999997199898657562000131477665-8-------7457531342344578888888775325
Q ss_pred CCCCCCCCCC-----------------CCC--CCCCCCCCCCHHHHHHHHHHHHCCCCCC---HHHHHCCHHHHHHHHHH
Q ss_conf 0111222223-----------------322--3453211110012334554320122210---11210000268899998
Q gi|254780432|r 259 TNEVAACMNQ-----------------GSH--GSTYGGNVLAMVLGEKVLNIIQSDGFLE---NVINIAKILFEGLTAIK 316 (392)
Q Consensus 259 ~~~i~~~~~~-----------------~~~--~~T~~gnpl~~aaa~a~L~~l~~~~l~~---~~~~~g~~l~~~L~~l~ 316 (392)
++++...+.. .+. .+.|-||-..+..|.+-|..+=.+.|.+ .+--..++++++|++..
T Consensus 292 ~~~L~pfLP~P~v~~~~~~y~l~~~~~~siG~v~~f~Gn~~vl~ra~~Yi~~lG~~GL~~~s~~AvLNANYl~~~L~~~~ 371 (490)
T PRK04366 292 KKELAPFLPVPVVEKDGGRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLMARLKDVY 371 (490)
T ss_pred HHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 54412008887021368831126788766321120247518899999999986674789999999999999999853557
Q ss_pred HHCCCEEEEECCCEEEEEEEECCC-----------HHHHHHHHHHCCEEE----EEC-CCCEEEECCCCCCCHHHHHHHH
Q ss_conf 867970755046400999872499-----------899999999689899----626-8988995589868899999999
Q gi|254780432|r 317 NRFPNMFLEVRGQGLLIGLKTVFS-----------PALLAAKFRDECLLT----APS-SDNVVRILPPLTITAEEIHEGL 380 (392)
Q Consensus 317 ~~~~~~v~~vRG~Gl~~~ie~~~~-----------~~~~~~~l~~~Gll~----~~~-~~~~irl~Ppl~it~~eid~~i 380 (392)
. +.- .+. .+ -||+.+ ...+++++.+.|... .|. -...+-+-|.=+=+.++||+++
T Consensus 372 ~----~~y--~~~-~~--HEfv~~~~~~~k~~gv~~~DiaKrLlDyG~H~pT~~fPliV~e~lmiEPTEsEske~LD~f~ 442 (490)
T PRK04366 372 D----LPY--PRR-CM--HEFVLSGKRLKKETGVRALDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFI 442 (490)
T ss_pred C----CCC--CCC-EE--EEEEECCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHH
T ss_conf 5----788--997-67--89996437754423998999999985779997610166657873153675777999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999985
Q gi|254780432|r 381 ERIERTAIKL 390 (392)
Q Consensus 381 ~~l~~al~~L 390 (392)
+++.+...|.
T Consensus 443 ~am~~I~~ea 452 (490)
T PRK04366 443 DAMKEIAEEA 452 (490)
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 226
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.13 E-value=1.1e-09 Score=83.71 Aligned_cols=278 Identities=17% Similarity=0.174 Sum_probs=161.7
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 68757818999998652010133312356555403567776654320013478600234354656543212345532113
Q gi|254780432|r 68 SNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQY 147 (392)
Q Consensus 68 ~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~ 147 (392)
-.+..||....|+++|.+.-+...++.+.||--|+ +|+ ++-. ++|. .||+-+..|.|.....- ..
T Consensus 44 Y~R~~nPt~~~lE~~la~LEg~~~a~~~sSGmAAi-~a~-la~~------~~Gd-~iv~~~~~Yg~t~~~~~------~~ 108 (379)
T PRK06176 44 YSRSGNPTRFALEELIADLEGGVKGFAFASGLAGI-HAV-FSLF------QSGD-HVLLGDDVYGGTFRLFD------KV 108 (379)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHH-HHH-HHHH------CCCC-EEEEECCCCCCHHHHHH------HH
T ss_conf 40898854999999999982986533125579999-999-9986------8999-89981898887767459------87
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 47999864333222100268875410123322223332222112462101232211022345721310110034444555
Q gi|254780432|r 148 LEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK 227 (392)
Q Consensus 148 ~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~ 227 (392)
...++ -.+..++..|.+.+++.+.++...|++|..-.--. ..++ ++++.++|+++|+++|+|-+.+ .
T Consensus 109 l~~~G---I~~~~vd~~d~~~~~~~i~~~Tklv~~EspsNP~l-~v~D---i~~ia~ia~~~gi~~vvDNT~a------t 175 (379)
T PRK06176 109 LVKNG---LSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLL-KITD---LAQCASVAKDHGLLTIVDNTFA------T 175 (379)
T ss_pred HHCCC---EEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCC-CCCC---CHHHHHHHHHCCCEEEEECCCC------C
T ss_conf 64478---49998678676889965687745999977999876-0158---5899999997698799736721------5
Q ss_pred CCCCCCCCCCCCEE--ECCCCCCCC-CCCCC-CCCCCC-CCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHC--CCCC
Q ss_conf 31011124545302--103444444-34432-100011-12222233--2234532111100123345543201--2221
Q gi|254780432|r 228 LFAYEWANVKPDIM--TIAKGMGGG-FPIGA-CLATNE-VAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQS--DGFL 298 (392)
Q Consensus 228 ~f~~e~~gi~PDi~--~~gK~l~gG-~P~sa-v~~~~~-i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~ 298 (392)
...++-+..=.||+ -..|-|+|. =-+++ |+++++ +.+.+... ..|.+. +|..|...+..|+-+.- +.-.
T Consensus 176 P~~~~Pl~~GaDiVihS~TKyi~GhsD~l~G~vv~~~~~~~~~~~~~~~~~G~~l--~p~~a~ll~rGL~TL~lR~~~~~ 253 (379)
T PRK06176 176 PYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVL--GPQDSWLLQRGIKTLGLRMEAHQ 253 (379)
T ss_pred CCCCCHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCC--CHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 1332623418988999545011478774023883496899999999997507777--84678999722252899999999
Q ss_pred CHHHHHCCHHHHHHHHHHHHCCCEEEE------------------ECCCEEEEEEEECCCHHHHHHHHHHCC-EEE----
Q ss_conf 011210000268899998867970755------------------046400999872499899999999689-899----
Q gi|254780432|r 299 ENVINIAKILFEGLTAIKNRFPNMFLE------------------VRGQGLLIGLKTVFSPALLAAKFRDEC-LLT---- 355 (392)
Q Consensus 299 ~~~~~~g~~l~~~L~~l~~~~~~~v~~------------------vRG~Gl~~~ie~~~~~~~~~~~l~~~G-ll~---- 355 (392)
+++.++.+ ..++||. |.. ..|.|-|++|++... .. +.++.++- ++.
T Consensus 254 ~nA~~vA~--------~L~~hp~-V~~V~yPgL~s~p~~~la~~~~~g~gg~~sf~l~~~-~~-a~~f~~~l~lf~~a~s 322 (379)
T PRK06176 254 KNALCVAE--------FLEKHPK-VEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKND-SE-AVAFVESLKLFILGES 322 (379)
T ss_pred HHHHHHHH--------HHHHCCC-CCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCH-HH-HHHHHHHCCCCEEECC
T ss_conf 99999999--------9871998-267989899999439999976789998547885689-99-9999981882546216
Q ss_pred ---------EE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ---------62-----------------689889955898688999999999999999985
Q gi|254780432|r 356 ---------AP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 356 ---------~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.| ..++.||++ +--|+.+++++-|+++|.+|
T Consensus 323 lGg~eSLi~~P~~~th~~~~~e~r~~~Gi~~~liRlS----vGlEd~~DLi~Dl~~AL~~i 379 (379)
T PRK06176 323 LGGVESLVGVPAFMTHACIPKEQREAAGIRDGLVRLS----VGIEHEQDLLEDLEQAFAKI 379 (379)
T ss_pred CCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEE----ECCCCHHHHHHHHHHHHHCC
T ss_conf 6887604247632255448999998669893949999----51199999999999998339
No 227
>pfam01041 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family. The members of this family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA, StsC, and StsS. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase EC:2.6.1.50, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin.
Probab=99.13 E-value=4.5e-10 Score=86.32 Aligned_cols=300 Identities=16% Similarity=0.160 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999999999731450687578189999986520101333123565554035677766543200134786002343546
Q gi|254780432|r 51 PELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGA 130 (392)
Q Consensus 51 p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~ 130 (392)
.+-++++.+.+++-++++ ..+...+|++++.+..+...+..++|||.|.+.|++.... .+| ++||.=.-.
T Consensus 5 ~~~~~~v~~~l~s~~~~~---~G~~v~~fE~~~~~~~g~k~~v~~~sgT~Al~lal~a~~~------~~g-deVi~p~~t 74 (363)
T pfam01041 5 EEELAAVTEVLRSGWLTT---GGPEVREFEKEFAAYLGVKHAVAVSSGTAALHLALRALGI------GPG-DEVIVPSFT 74 (363)
T ss_pred HHHHHHHHHHHHCCCCCC---CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCC------CCC-CEEEECCCC
T ss_conf 899999999997398147---9989999999999997849599975889999999998598------892-999979977
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 565432123455321134799986433322210-0268875410123322223332222112462101232211022345
Q gi|254780432|r 131 FHGRTLATISAGGKLQYLEGFGPKIEGFDQAKF-CDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDI 209 (392)
Q Consensus 131 yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~-~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~ 209 (392)
|.. |-.+-.+.+..|...+++...+ -|++.+++.+.+++-|||+=.+.|. + .+ +.+++++|++|
T Consensus 75 ~~a--------t~~ai~~~G~~pvf~Dvd~~t~~id~~~l~~~i~~~tkaIi~vh~~G~----~--~d-~~~i~~~~~~~ 139 (363)
T pfam01041 75 FVA--------TANAVLYLGAKPVFVDIDPDTYNIDPAAIEAAITPRTKAIMPVHLYGQ----P--AD-MDAIRAIAAEH 139 (363)
T ss_pred CHH--------HHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCC----C--CC-HHHHHHHHHHC
T ss_conf 598--------899999869979985064565685899999860758709998789898----6--89-99999999984
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC----CCCCCCCCCCCCCCCC-CCCCCCCCC---------------
Q ss_conf 72131011003444455531011124545302103----4444443443210001-112222233---------------
Q gi|254780432|r 210 DALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA----KGMGGGFPIGACLATN-EVAACMNQG--------------- 269 (392)
Q Consensus 210 g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g----K~l~gG~P~sav~~~~-~i~~~~~~~--------------- 269 (392)
|+.+|-|=-|+ || ..+.-...|---|+.|+| |.|+.|= =|++++++ ++++.+...
T Consensus 140 ~i~lIEDaA~a-~G---a~~~gk~~G~~gd~~~fSF~~~K~ittGe-GG~i~tnd~~l~~~~r~lr~~G~~~~~~~~~~~ 214 (363)
T pfam01041 140 GLPVIEDAAHA-HG---ATYKGKRVGTFGDAATFSFFPTKNITTGE-GGAVVTDDPELAERARCLRNHGCGRPANKRYRH 214 (363)
T ss_pred CCEEEEECCCC-CC---CCCCCEECCCCCCCCEEECCCCCCCCCCC-CEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEE
T ss_conf 99999731320-26---76586543564452102057876544689-709996999999999999965968898775224
Q ss_pred --CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECC--CE--EEEEEEEC----C
Q ss_conf --22345321111001233455432012221011210000268899998867970755046--40--09998724----9
Q gi|254780432|r 270 --SHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRG--QG--LLIGLKTV----F 339 (392)
Q Consensus 270 --~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG--~G--l~~~ie~~----~ 339 (392)
..|.-|..+.+.+|.+++-|+.++ +++++-+++.+++.+.|..+... ..+....+ .. ..+.+-+. .
T Consensus 215 ~~~~G~N~rmseiqAaigl~qL~~l~--~~~~~R~~i~~~Y~~~L~~~~~~--~~~~~~~~~~~~~~~~f~i~~~~~~~~ 290 (363)
T pfam01041 215 EVPLGYNYRMTELQAAIGLAQLERLD--EFIARRREIAERYQELLAELPGF--EPLTLPTEEDDHAWHLFPVLVPEEAAG 290 (363)
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCCCCC--EECCCCCCCCCEEEEEEEEEECCCCHH
T ss_conf 50677556767889999999999999--99999999999999985789994--106868888751479999997643423
Q ss_pred CHHHHHHHHHHCCEEEEECCC----------------------------CEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 989999999968989962689----------------------------889955898688999999999999
Q gi|254780432|r 340 SPALLAAKFRDECLLTAPSSD----------------------------NVVRILPPLTITAEEIHEGLERIE 384 (392)
Q Consensus 340 ~~~~~~~~l~~~Gll~~~~~~----------------------------~~irl~Ppl~it~~eid~~i~~l~ 384 (392)
....+.+.|.++||-+++... +.|.+=-.-.+|++|++.+++.|.
T Consensus 291 ~R~~l~~~L~~~gI~t~~~y~~pl~~~~~~~~~~~~~~~~~pna~~l~~~~l~LP~~~~Lt~~di~~I~~~IK 363 (363)
T pfam01041 291 SRDELVEALKEAGIGTRVHYPIPLHLQPYYEDRVYYAPGDLPNAERLASRVLSLPLYPGLTDEEVDRVAEAVR 363 (363)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCHHHCHHHHHCCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 3999999999879955865897134297877456888889989999985989897999889999999998639
No 228
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases; InterPro: IPR005958 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway are included in this family. ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding, 0006519 amino acid and derivative metabolic process.
Probab=99.13 E-value=5.2e-09 Score=79.35 Aligned_cols=317 Identities=20% Similarity=0.231 Sum_probs=181.8
Q ss_pred HCCCCCCH----------HHHHHHHHHHHHCCC---CCCCCCCHHHHHHHHHHH------HHCC----CCCCCCCCCCCC
Q ss_conf 35787899----------999999999973145---068757818999998652------0101----333123565554
Q gi|254780432|r 44 NSLGHSHP----------ELVAILKSQSEKLWH---VSNLYQSTQQEIFANHLI------HSTF----ADRVFFTNSGAE 100 (392)
Q Consensus 44 ~~lGh~~p----------~i~~a~~~q~~~~~~---~~~~~~~~~~~~la~~L~------~~~~----~~~v~f~~SGse 100 (392)
..|+|+.| +..+||.+++++..+ .+....-..+.+.|+.+. +..+ +|-|++|.+||.
T Consensus 41 i~L~~GDPs~f~~lrT~~ea~~Av~~al~Sg~~NgYap~~G~~~AR~AvA~y~~~sfvhn~~~~~~l~a~DV~ltsGCsq 120 (424)
T TIGR01265 41 IPLSHGDPSVFGNLRTAPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSNSFVHNQRLPGKLSADDVVLTSGCSQ 120 (424)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEECCCHH
T ss_conf 15888788877788887899999999983478567664368678889999996622212578888757664488477226
Q ss_pred CHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 0356777-6654320013478600234354656543212345532113479998-6433322210026887541012332
Q gi|254780432|r 101 SVECAIK-TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGP-KIEGFDQAKFCDLQSLKNQISNDTA 178 (392)
Q Consensus 101 A~e~Aik-lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p-~~~~~~~~~~~d~~~l~~~~~~~iA 178 (392)
|.|.+|. || +.+|-. |+.=+-||= ...|++...... -+.|.- ++ +.-..-|++.++...+|+++
T Consensus 121 AIe~~I~aLA-------~~pG~N-ILvPRPGfP--~Y~t~A~~~~lE-vr~ydLdlP---e~~WeiDL~~le~l~DekT~ 186 (424)
T TIGR01265 121 AIEIVIEALA-------QNPGAN-ILVPRPGFP--LYDTRAAFSGLE-VRLYDLDLP---EKDWEIDLDGLESLADEKTV 186 (424)
T ss_pred HHHHHHHHHH-------CCCCCC-EECCCCCCC--CHHHHHHHCCCC-CCCCCCCCC---CCCCEECHHHHHHHHCCCCE
T ss_conf 8999999972-------689883-556877786--689999771872-000246788---87523647899876326876
Q ss_pred CCC-CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC----CCCCC-CC-CCCCCCEEE--CCCCCCC
Q ss_conf 222-333222211246210123221102234572131011003444455----53101-11-245453021--0344444
Q gi|254780432|r 179 AIL-IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG----KLFAY-EW-ANVKPDIMT--IAKGMGG 249 (392)
Q Consensus 179 avi-~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG----~~f~~-e~-~gi~PDi~~--~gK~l~g 249 (392)
|+| .-|=-=-|+ +.+.+=|++|.++|+|+++++|+|||+-.|==-| +-|-. -. .-..|=|+| ++|..=-
T Consensus 187 A~vv~NP~NPCGs--VF~~~HL~k~~~~A~kl~i~iIADEiY~~~Vf~dkDPn~~F~p~a~f~~~VPvl~lGgisKrW~V 264 (424)
T TIGR01265 187 AIVVINPSNPCGS--VFSRDHLEKIAEVARKLGIPIIADEIYGHLVFGDKDPNAPFVPMASFASIVPVLSLGGISKRWVV 264 (424)
T ss_pred EEEEECCCCCCCC--CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHCCCCC
T ss_conf 9998475667888--87888899999999870982687763164144889788862230035786886886310112327
Q ss_pred -CCCCCCCCCC--CCC------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC---CCC----CCHHHHHCCHHHHHHH
Q ss_conf -4344321000--111------22222332234532111100123345543201---222----1011210000268899
Q gi|254780432|r 250 -GFPIGACLAT--NEV------AACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS---DGF----LENVINIAKILFEGLT 313 (392)
Q Consensus 250 -G~P~sav~~~--~~i------~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l----~~~~~~~g~~l~~~L~ 313 (392)
|==+|=++.. +.+ .+.+..... -|-+ | |.-...+|--|.+ +++ ++-+++..++.-++|+
T Consensus 265 PGWRlGWi~~~Dp~gi~~~~k~~~gl~~~~~-~~~g--P--~Ti~QgALP~IL~~Tp~efF~~~~~~lk~na~l~y~~L~ 339 (424)
T TIGR01265 265 PGWRLGWIIVHDPHGILRDTKVLQGLKNVLQ-LILG--P--ATIVQGALPDILENTPQEFFDKKISVLKENAELCYEELK 339 (424)
T ss_pred CCCEEEEEEEECCCCCCCCCCHHHHHHHHHC-CCCC--C--HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7622432778888775444403389899842-3478--1--578999999998516876889999998851889999973
Q ss_pred HHHHHCCCEEEEEC-CCEEEE---EEEEC-----CCHHHHHH-HHHHCCEEEEECC----CCEEEECCCCCCCHHHHHHH
Q ss_conf 99886797075504-640099---98724-----99899999-9996898996268----98899558986889999999
Q gi|254780432|r 314 AIKNRFPNMFLEVR-GQGLLI---GLKTV-----FSPALLAA-KFRDECLLTAPSS----DNVVRILPPLTITAEEIHEG 379 (392)
Q Consensus 314 ~l~~~~~~~v~~vR-G~Gl~~---~ie~~-----~~~~~~~~-~l~~~Gll~~~~~----~~~irl~Ppl~it~~eid~~ 379 (392)
++ | .+.-++ =.|.|. .||+. +++-.++. .+.|+-|++.|.. +|-+|+. ++...+.+.++
T Consensus 340 ~i----p-g~~c~~KP~G~MY~mvkl~~~~~~~ikdD~dFc~kL~~EESv~~LPG~~f~~pnw~Rit--~t~~~~~~~Ea 412 (424)
T TIGR01265 340 DI----P-GLTCPKKPEGSMYLMVKLELELLEEIKDDVDFCEKLVKEESVICLPGSAFGLPNWVRIT--ITVPKSMLEEA 412 (424)
T ss_pred CC----C-CCCCCCCCCCCEEEHHHCCHHHCCCCCCCHHHHHHHHHHCCCEECCCEEECCCCCEEEE--ECCCHHHHHHH
T ss_conf 48----8-76476488875000201016534464641899999987376335460025599847998--52767789999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780432|r 380 LERIERTAI 388 (392)
Q Consensus 380 i~~l~~al~ 388 (392)
++||++=+.
T Consensus 413 ~~Rik~FC~ 421 (424)
T TIGR01265 413 LERIKEFCE 421 (424)
T ss_pred HHHHHHHHH
T ss_conf 999987630
No 229
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.11 E-value=1.1e-08 Score=77.33 Aligned_cols=311 Identities=15% Similarity=0.167 Sum_probs=176.0
Q ss_pred CCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHH
Q ss_conf 9764641022674357878999999999999731450687578189999986520101--33312356555403567776
Q gi|254780432|r 31 GIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKT 108 (392)
Q Consensus 31 G~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aikl 108 (392)
|+..|.+.++ -+.+|-. |.+++|+.++++.... +.|..+...+|.+.|.+..+ .+.+..+|+.+|+....+++
T Consensus 17 ~~~~I~L~~N--Enp~gpp-~~v~~ai~~~l~~~~~--~rYPd~~~~~Lr~~ia~~~gv~~~~v~~gnGs~e~i~~~~~~ 91 (337)
T PRK03967 17 GDYRIWLDKN--ENPFDLP-EELKEEIFEELKRVPF--NRYPHITADPLREAIAEFLGLDAENIIVGNGSDELISYLVKL 91 (337)
T ss_pred CCCCEEEECC--CCCCCCC-HHHHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHH
T ss_conf 9981782698--9999999-9999999999871587--769999879999999998683841099827889999999986
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 65432001347860023435465654321234553211347999864333222100268875410123322223332222
Q gi|254780432|r 109 ARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGE 188 (392)
Q Consensus 109 ar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~ 188 (392)
+ .++ +++....+|---...+. +.|-.... -|..++| ..|++.+.+...+.-..+|.-|=-=.
T Consensus 92 ---~------~gd-~v~i~~P~f~~Y~~~~~-~~g~~~~~---vpl~~~f----~~d~~~~~~~~~~~~~v~l~nPnNPT 153 (337)
T PRK03967 92 ---F------NGK-YIVISPPTFGMYSFYAK-LNGIPVID---VPLKEDF----TIDGDRIVEKAKDASAVFICSPNNPT 153 (337)
T ss_pred ---C------CCC-EEEECCCCCHHHHHHHH-HCCCEEEE---EECCCCC----CCCHHHHHHCCCCCCEEEEECCCCCC
T ss_conf ---3------999-79986898308999999-83985999---6153456----78999998517788789993899987
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCCC-CCCCCCCCCCCCCCC
Q ss_conf 11246210123221102234572131011003444455531011124545302---10344444-434432100011122
Q gi|254780432|r 189 GGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMGG-GFPIGACLATNEVAA 264 (392)
Q Consensus 189 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~g-G~P~sav~~~~~i~~ 264 (392)
|.. .+.+-+. ++++ .+.++|+||..--|... .+. ....--|.++ +|||..|- |+-+|.+++++++.+
T Consensus 154 -G~~-~~~~el~---~~~~-~~~~vvvDEaY~ef~~~-s~~--~l~~~~~nliv~rSfSK~~glaGlRlGy~ia~~~~i~ 224 (337)
T PRK03967 154 -GNL-QPIEEIL---KVLD-TGKPVVVDEAYVEFSGK-SYI--GLLDEYDNLILLRTFSKAFGLAGIRVGYAIANEEIIK 224 (337)
T ss_pred -CCC-CCHHHHH---HHHH-CCCEEEECCCHHHHCCC-CHH--HHHHHCCCCEEEECCCHHHCCCCCCCEEECCCHHHHH
T ss_conf -621-6789999---8650-08878843554764575-257--7887477621665566553456200231018999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCHHH
Q ss_conf 2223322345321111001233455432012221-011210000268899998867970755046400999872499899
Q gi|254780432|r 265 CMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFL-ENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSPAL 343 (392)
Q Consensus 265 ~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~-~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~~ 343 (392)
.+.... ..|+-|.++.++|.++|+- .+.. ++++.+ .+.-+.+..+....+. ...+-++-+++ .
T Consensus 225 ~l~k~~--~p~~vn~~a~~aa~aal~~---~~~~~~~~~~~----~~~r~~l~~~L~~~~~--ps~aNFvl~~~-----~ 288 (337)
T PRK03967 225 ALYRIK--PPFSLNILSEKIVRLMLDH---YDLIKERIDYI----IKERERVYRELGDYAY--PSDANFLLLKL-----D 288 (337)
T ss_pred HHHHHC--CCCCCCHHHHHHHHHHHHC---HHHHHHHHHHH----HHHHHHHHHHHHCCCC--CCCCEEEEEEH-----H
T ss_conf 999953--8987759999999999629---99999999999----9999999998127778--99881999725-----8
Q ss_pred HHHHHHHCCEEEEEC---CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999689899626---8988995589868899999999999999998529
Q gi|254780432|r 344 LAAKFRDECLLTAPS---SDNVVRILPPLTITAEEIHEGLERIERTAIKLSH 392 (392)
Q Consensus 344 ~~~~l~~~Gll~~~~---~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~~ 392 (392)
+.+.|+++|++++.. .++.+|++ +=|.+|.++++++|++-+.+..|
T Consensus 289 ~~~~L~~~gIlVR~~~~~~~~~iRIs---vgt~een~~ll~aLke~~e~~~~ 337 (337)
T PRK03967 289 AYDYLLENGIVVRKLSGRLEGHIRVT---IGKKEENDEFIKALKEFKENYGN 337 (337)
T ss_pred HHHHHHHCCEEEECCCCCCCCEEEEE---CCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999849909948999999989998---39999999999999999997289
No 230
>PRK06460 hypothetical protein; Provisional
Probab=99.11 E-value=1.3e-10 Score=89.90 Aligned_cols=279 Identities=16% Similarity=0.195 Sum_probs=167.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 75781899999865201013331235655540356777665432001347860023435465654321234553211347
Q gi|254780432|r 70 LYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLE 149 (392)
Q Consensus 70 ~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~ 149 (392)
+..||....|+++|.+.-+.+.++.+.||--|+.+++- +.. ++| ..||+-+..|.|.....- .+..
T Consensus 41 R~gnPT~~~le~~la~LEg~~~a~~~~SGmaAi~~~l~-~~l------~~G-dhiv~~~~~Yg~t~~l~~------~~l~ 106 (375)
T PRK06460 41 REVNPTVLKLAEKIAELEEAEMGVAFSSGMGAISTTLL-TLL------KPG-SSVLIHRDMFGRSYRFFT------DFLR 106 (375)
T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-HHH------CCC-CEEEECCCCCCCHHHHHH------HHHH
T ss_conf 89887799999999998199808995359999999999-972------899-989971787586799999------9987
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 99986433322210026887541012332222333222211246210123221102234572131011003444455531
Q gi|254780432|r 150 GFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF 229 (392)
Q Consensus 150 ~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f 229 (392)
.++- .+..++..|.+.+++.+.++...|++|..-.-. ...++ ++++.++|+++|+++|+|-+.. ..+
T Consensus 107 ~~Gv---~v~~~d~~~~~~~~~~~~~~Tklv~~EspsNP~-l~v~D---i~~i~~ia~~~gi~~vVDNT~a------tP~ 173 (375)
T PRK06460 107 NWGV---KVEVARPGEENILEKIKNKRYDVVFVETISNPL-LRVID---IPELSKACKENGALLIVDSTFA------TPI 173 (375)
T ss_pred HCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---CHHHHHHHHHCCCEEEEECCCC------CCC
T ss_conf 3786---779738999999997347676089998899987-64058---5899999987499389756741------412
Q ss_pred CCCCCCCCCCEEE--CCCCCCCC--CCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCHH
Q ss_conf 0111245453021--03444444--3443210001112222233--2234532111100123345543201--2221011
Q gi|254780432|r 230 AYEWANVKPDIMT--IAKGMGGG--FPIGACLATNEVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQS--DGFLENV 301 (392)
Q Consensus 230 ~~e~~gi~PDi~~--~gK~l~gG--~P~sav~~~~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~ 301 (392)
.++-...=.||++ +.|-++|. .-.|++++++++++.+... ..|.+. +|..|...+..|+-+.- +.-.+++
T Consensus 174 ~~~Pl~~GaDivvhS~TKyi~GhsD~l~Gvv~~~~~~~~~l~~~~~~~G~~l--sP~~a~l~~rGl~TL~lR~~~~~~nA 251 (375)
T PRK06460 174 NQKPLVQGADIVIHSASKFIAGHNDVIAGLAAGSYELMKKIDLMRRTLGTSL--DPHAAYLTIRGIKTLKIRMDVINSNA 251 (375)
T ss_pred CCCHHHHCCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCC--CHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 2881451798899955643467887340342481999999999986427878--81668888636998999999999999
Q ss_pred HHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHCCEEE--------
Q ss_conf 2100002688999988679707550------------------46400999872499899999999689899--------
Q gi|254780432|r 302 INIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDECLLT-------- 355 (392)
Q Consensus 302 ~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~Gll~-------- 355 (392)
.+ +.++.++||. |..| +|.|-|++|++........+.+..--++.
T Consensus 252 ~~--------lA~~L~~hp~-V~~V~yPgl~s~p~h~lakk~~~g~ggl~sf~l~~~~~~~~~f~~~L~lf~~a~SlGg~ 322 (375)
T PRK06460 252 QK--------IAEFLQEHPK-VSKVYYPGLKSHPDYGIARRVLKGYGGVVSFEIKGSQNDALKLMKRLSVILPAQTLGGV 322 (375)
T ss_pred HH--------HHHHHHHCCC-CCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEECCCCCCC
T ss_conf 99--------9999974898-17798989999947999998569997426999708999999999828826343167876
Q ss_pred -----EE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -----62-----------------689889955898688999999999999999985
Q gi|254780432|r 356 -----AP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 356 -----~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.| ..++.|||+- --|+.+++++-|+++|.+|
T Consensus 323 eSLi~~p~~~sh~~~~~e~~~~~Gi~~~liRlSv----GlEd~eDLi~DL~~AL~~l 375 (375)
T PRK06460 323 NSTISHPATMSHRTLTPEERKILGITDSMLRLSV----GIEDVEDLIEDLDRALSNL 375 (375)
T ss_pred CCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE----CCCCHHHHHHHHHHHHHCC
T ss_conf 3011275424553189999996597939699994----2199999999999998339
No 231
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.11 E-value=1.1e-09 Score=83.77 Aligned_cols=279 Identities=17% Similarity=0.231 Sum_probs=167.6
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6875781899999865201013331235655540356777-665432001347860023435465654321234553211
Q gi|254780432|r 68 SNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIK-TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ 146 (392)
Q Consensus 68 ~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aik-lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~ 146 (392)
-.+..||....|+++|...-+.+.++.+.||--|+.+++- ++ ++| ..||+-+..|.|.....- .
T Consensus 52 YsR~~nPT~~~le~~la~LEg~~~a~~~sSGmaAi~~~l~~ll--------~~G-d~iv~~~~~YggT~~l~~------~ 116 (386)
T PRK07811 52 YARTGNPTRTALEEQLAALEGGKYGRAFSSGMAATDCLLRAVL--------RPG-DHIVIPNDAYGGTFRLID------K 116 (386)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHH--------CCC-CEEEECCCCCHHHHHHHH------H
T ss_conf 5399886799999999998499878983339999999999983--------899-989937876521999999------9
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 34799986433322210026887541012332222333222211246210123221102234572131011003444455
Q gi|254780432|r 147 YLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG 226 (392)
Q Consensus 147 ~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG 226 (392)
....++- .+..++..|.+.+++.+.++...|++|..-.-. ...++ ++++.++|+++|+++|+|-..+ |
T Consensus 117 ~l~~~Gi---~~~~vd~~d~~~~~~~i~~~Tkli~~Esp~NP~-l~v~D---i~~i~~ia~~~g~~~vVDNT~a----t- 184 (386)
T PRK07811 117 VFTRWGV---EYTPVDLSDLDAVRAAITPRTKLIWVETPTNPL-LSITD---IAAIAELAHDAGAKVVVDNTFA----S- 184 (386)
T ss_pred HHHHCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---CHHHHHHHHHCCCEEEEECCCC----C-
T ss_conf 9873580---499778878788986558883499997799987-64058---5899999985578188316733----5-
Q ss_pred CCCCCCCCCCCCCEEE--CCCCCCC-CCCC-CCCCCCC-CCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHC--CCC
Q ss_conf 5310111245453021--0344444-4344-3210001-112222233--2234532111100123345543201--222
Q gi|254780432|r 227 KLFAYEWANVKPDIMT--IAKGMGG-GFPI-GACLATN-EVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQS--DGF 297 (392)
Q Consensus 227 ~~f~~e~~gi~PDi~~--~gK~l~g-G~P~-sav~~~~-~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~--~~l 297 (392)
.+.+.-...=.||++ ..|-|+| |=-+ |++++++ ++.+.+... ..|.+. +|..|...+..|+-+.- +.-
T Consensus 185 -P~~~~Pl~~GaDiVvhS~TKyl~GHsDvl~G~vv~~~~~~~~~~~~~~~~~G~~~--sP~~a~l~lrGL~TL~lRm~~~ 261 (386)
T PRK07811 185 -PYLQQPLALGADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQNGAGAVP--GPFDAYLTMRGLKTLAVRMDRH 261 (386)
T ss_pred -CCEECHHHHCCCEEEEECCCEECCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHHHHHHHH
T ss_conf -2042523407987997344400578772424786082899999999997427878--8578889986573699999999
Q ss_pred CCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHC-CEE----
Q ss_conf 10112100002688999988679707550------------------4640099987249989999999968-989----
Q gi|254780432|r 298 LENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDE-CLL---- 354 (392)
Q Consensus 298 ~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~-Gll---- 354 (392)
.+|+.++. ++.++||. |..| +|-|-|++|++....+. .+++.++ -++
T Consensus 262 ~~nA~~lA--------~~L~~hp~-V~~V~yPgL~s~p~h~la~~~~~g~Gg~~sf~l~g~~~~-~~~f~~~L~lf~~a~ 331 (386)
T PRK07811 262 SENAEAVA--------EFLDGHPE-VSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLRGGEEA-ARDFCARTKVFTLAE 331 (386)
T ss_pred HHHHHHHH--------HHHHCCCC-CCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHH-HHHHHHHCCCCEEEE
T ss_conf 99999999--------99972998-377989999999378999986799986348996286999-999997089162657
Q ss_pred ---------EEE--------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ---------962--------------689889955898688999999999999999985
Q gi|254780432|r 355 ---------TAP--------------SSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 355 ---------~~~--------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
..| ..++.||++- --|+.+++++-|+++|.+|
T Consensus 332 SlGg~eSLi~~pa~~th~~~~~~~~~i~~~liRlSV----GlEd~~DLi~Dl~qAL~~i 386 (386)
T PRK07811 332 SLGGVESLIEHPSAMTHASTAGSQLEVPDDLVRLSV----GIEDVADLLADLEQALGKI 386 (386)
T ss_pred CCCCCCHHEECCCCCCCCCCCHHHCCCCCCEEEEEE----EECCHHHHHHHHHHHHHCC
T ss_conf 877552300487546631159776399949699976----0089999999999998249
No 232
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.10 E-value=1.6e-09 Score=82.78 Aligned_cols=283 Identities=14% Similarity=0.181 Sum_probs=167.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 50687578189999986520101333123565554035677766543200134786002343546565432123455321
Q gi|254780432|r 66 HVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL 145 (392)
Q Consensus 66 ~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~ 145 (392)
+.-.+..||....|+++|++.-+.+.++.+.||--|+.+++--.- ++|. .||+-++.|-| |..-+.
T Consensus 56 ~~YsR~~nPT~~~lE~~la~LEgg~~a~~~sSGmaAi~~~l~~~l-------~~Gd-hiv~~~~~YGg-T~~l~~----- 121 (399)
T PRK06234 56 YIYTRLGNPTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSAL-------KAGD-HVVASDTLYGC-TFALLN----- 121 (399)
T ss_pred CEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHC-------CCCC-EEEECCCCCHH-HHHHHH-----
T ss_conf 524299886799999999998399759984588999999999971-------8999-89975887204-899999-----
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC-CCEEEECCCCCCCCC
Q ss_conf 1347999864333222100268875410123322223332222112462101232211022345-721310110034444
Q gi|254780432|r 146 QYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDI-DALLIFDEVQTGYGR 224 (392)
Q Consensus 146 ~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GR 224 (392)
.....++. .+..++..|.+++++.+.++.-.|++|+.-.-..- .++ ++.+.++|++| |+++|+|-+..
T Consensus 122 ~~l~~~Gi---~~~~vd~~d~~~~~~ai~~~Tklv~~Etp~NP~l~-v~D---i~~ia~iA~~~~g~~~vvDNT~a---- 190 (399)
T PRK06234 122 HGLTRYGV---EVTFVDTSNLEEVRNALKANTKVVYLETPANPNLK-VTD---IKAISNIAHENKECLVFVDNTFC---- 190 (399)
T ss_pred HHHHCCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCE-ECC---CHHHHHHHHHCCCCEEEEECCCC----
T ss_conf 88651685---78862688969999647888449999789998866-148---58999987655797687258977----
Q ss_pred CCCCCCCCCCCCCCCEEE--CCCCCCCC--CCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCHHHHHHHHHHHHC--
Q ss_conf 555310111245453021--03444444--3443210001112222233----2234532111100123345543201--
Q gi|254780432|r 225 TGKLFAYEWANVKPDIMT--IAKGMGGG--FPIGACLATNEVAACMNQG----SHGSTYGGNVLAMVLGEKVLNIIQS-- 294 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~~--~gK~l~gG--~P~sav~~~~~i~~~~~~~----~~~~T~~gnpl~~aaa~a~L~~l~~-- 294 (392)
| .+.++-+..=.||++ ..|-|+|- .=.|+|+++++.++..... ..|.+- +|..|.-.+..|+-+.-
T Consensus 191 t--P~~~~Pl~~GaDivihS~TKyi~GHsD~l~G~v~~~~~~~~~~r~~~~~~~~G~~l--~p~~a~l~lrGL~TL~lR~ 266 (399)
T PRK06234 191 T--PYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGVKDMTGSVI--GPFEAFLIIRGMKTLQIRM 266 (399)
T ss_pred C--CCCCCCCCCCCCEEEEECCCEECCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHCCCCCHHHHH
T ss_conf 6--14467400489789982563105887715469965599999999999887018868--8788899862467499999
Q ss_pred CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEE------------------ECCCEEEEEEEECCCHHHHHHHHHHCC-EE-
Q ss_conf 2221011210000268899998867970755------------------046400999872499899999999689-89-
Q gi|254780432|r 295 DGFLENVINIAKILFEGLTAIKNRFPNMFLE------------------VRGQGLLIGLKTVFSPALLAAKFRDEC-LL- 354 (392)
Q Consensus 295 ~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~------------------vRG~Gl~~~ie~~~~~~~~~~~l~~~G-ll- 354 (392)
+.-.+|+.++.+. .++||. |.. .+|-|-|++|++....+.. .++.++- ++
T Consensus 267 ~r~~~nA~~lA~~--------L~~hp~-V~~V~yPgL~shp~h~lak~~~~g~gg~~sf~l~~~~~~~-~~f~~~l~lf~ 336 (399)
T PRK06234 267 EKHCKNAMEVAEF--------LEKHPA-VEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEG-KVLMNNVKLAT 336 (399)
T ss_pred HHHHHHHHHHHHH--------HHHCCC-CCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHH-HHHHHHCCCCE
T ss_conf 9999999999999--------984898-4779898988994689999767899963688856979999-99998188464
Q ss_pred ------------EE-----------------ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf ------------96-----------------26898899558986889999999999999999852
Q gi|254780432|r 355 ------------TA-----------------PSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 355 ------------~~-----------------~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
.. +..++.||++.- -|+.+++++=|+++|.++.
T Consensus 337 ~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~gi~~~liRlSVG----lEd~eDLi~DL~qAL~~i~ 398 (399)
T PRK06234 337 LAVSLGDAETLIQHPASMTHSPYTAEERAEAGISDGLVRLSVG----LEDVEDIIADLKQALDLIV 398 (399)
T ss_pred ECCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHHHH
T ss_conf 3046776633005852125767999999966989196999940----0999999999999999864
No 233
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.10 E-value=1.4e-09 Score=83.08 Aligned_cols=303 Identities=16% Similarity=0.176 Sum_probs=172.1
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 57878999999999999731450687578189999986520101333123565554035677766543200134786002
Q gi|254780432|r 45 SLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRI 124 (392)
Q Consensus 45 ~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~i 124 (392)
.+-+.+.+-.++.-+ -+...+.-.++.||....|+++|.+.-+.+.++.+.||--|+-+++ ++.. ++| ..|
T Consensus 37 tf~f~~~~~~~~~~~-~~~~g~~YsR~~NPT~~~lE~~la~LEg~~~a~~~~SGmaAi~~~l-la~l------~~G-dhi 107 (397)
T PRK07504 37 GFVYDTAEAAEARFK-GEDPGFIYSRYSNPTVDMFEKRMCALEGAEDARATASGMAAVTAAI-LCQL------KAG-DHV 107 (397)
T ss_pred CEEECCHHHHHHHHC-CCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHH-HHHC------CCC-CEE
T ss_conf 733188899998736-8868963408988649999999999829985987344999999999-9855------899-989
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 34354656543212345532113479998643332221002688754101233222233322221124621012322110
Q gi|254780432|r 125 VTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRK 204 (392)
Q Consensus 125 i~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~ 204 (392)
|+-+..|.|.... + . .....++- .+..+...|++.+++.+.++.-.|++|+.-.-.. ..++ ++++.+
T Consensus 108 v~~~~~Yg~t~~l-~---~--~~l~~~Gi---~~~~vd~~d~~~~~~ai~~~Tklv~~EspsNP~l-~v~D---i~~ia~ 174 (397)
T PRK07504 108 VAARALFGSCRYV-V---E--TLLPRYGI---ESTLVDGLDLDNWEKAVRPNTKVFFLESPTNPTL-EVID---IAAVAE 174 (397)
T ss_pred EECCCCCHHHHHH-H---H--HHHHCCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCC-EECC---CHHHHH
T ss_conf 8558875569999-9---9--99860785---8998789885889974587753999854899974-5137---199999
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE--CCCCCCC-CCCCCC-CCCCCCCCC-CCCCC--CCCCCCCC
Q ss_conf 22345721310110034444555310111245453021--0344444-434432-100011122-22233--22345321
Q gi|254780432|r 205 ICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMT--IAKGMGG-GFPIGA-CLATNEVAA-CMNQG--SHGSTYGG 277 (392)
Q Consensus 205 lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~--~gK~l~g-G~P~sa-v~~~~~i~~-~~~~~--~~~~T~~g 277 (392)
+|+++|+++|+|-+.. ..+.++-+..=.||++ ..|-|+| |=-+++ |+++++.+. .+... ..|.+.
T Consensus 175 iA~~~g~~~vVDNTfa------tP~~~~Pl~~GaDiVvhS~TKyi~GHsDvlgGvv~~~~~~~~~~~~~~~~~~G~~~-- 246 (397)
T PRK07504 175 IANQAGAKLVVDNVFA------TPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSL-- 246 (397)
T ss_pred HHHHCCCEEEEECCCC------CCCCCCHHHHCCCEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCC--
T ss_conf 9998299599736622------11126845628887997425212588762546995558999999999999718878--
Q ss_pred CCCCHHHHHHHHHHHH--CCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEE
Q ss_conf 1110012334554320--122210112100002688999988679707550------------------46400999872
Q gi|254780432|r 278 NVLAMVLGEKVLNIIQ--SDGFLENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKT 337 (392)
Q Consensus 278 npl~~aaa~a~L~~l~--~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~ 337 (392)
+|..|...+..|+-+. =+.-.+|+.++. ++.++||. |..| +|-|-|+++++
T Consensus 247 ~p~~a~l~lRGL~TL~lRm~r~~~nA~~iA--------~~L~~hp~-V~~V~yPgl~s~p~~~~a~k~~~g~gg~~sf~l 317 (397)
T PRK07504 247 SPFNAWVLLKGLETLAVRVRQQTESAAAIA--------DFLAGHPK-VARVIYPGRADHPQADIVAKQMTGGSTLVAFEL 317 (397)
T ss_pred CHHHHHHHHCCCCCHHHHHHHHHHHHHHHH--------HHHHHCCC-CCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEE
T ss_conf 837889987167729999999999999999--------99973899-557979898778278899985799852458998
Q ss_pred CCCHHHHHHHHHHCCEEE-------------EE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 499899999999689899-------------62-----------------689889955898688999999999999999
Q gi|254780432|r 338 VFSPALLAAKFRDECLLT-------------AP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 338 ~~~~~~~~~~l~~~Gll~-------------~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
....+...+.+..--++. .| ..++.|||+. --|+++++++=|+++|
T Consensus 318 ~~~~~~~~~f~~~L~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~lvRlSV----GlEd~eDLi~Dl~~AL 393 (397)
T PRK07504 318 KGGKEAAFRFLNALKIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFIRLSA----GLEDTDDLIEDLEAAL 393 (397)
T ss_pred ECCHHHHHHHHHCCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE----CCCCHHHHHHHHHHHH
T ss_conf 288999999998089152222678765032376423431189999986697929599996----0089999999999999
Q ss_pred HHH
Q ss_conf 985
Q gi|254780432|r 388 IKL 390 (392)
Q Consensus 388 ~~L 390 (392)
.++
T Consensus 394 ~~i 396 (397)
T PRK07504 394 KKV 396 (397)
T ss_pred HHC
T ss_conf 852
No 234
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.10 E-value=1.4e-09 Score=83.08 Aligned_cols=296 Identities=16% Similarity=0.155 Sum_probs=173.1
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999731450687578189999986520101333123565554035677766543200134786002343546565
Q gi|254780432|r 54 VAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHG 133 (392)
Q Consensus 54 ~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG 133 (392)
++++.+.+++-+. ...+...+|++++.+..+...+..++|||.|.++|++.... .....||.=.-+|..
T Consensus 2 ~~~v~~~l~s~~~----~~G~~v~~fE~~~~~~~g~k~~v~~~sgt~Al~lal~~l~~-------~~gdeVi~p~~t~~a 70 (352)
T cd00616 2 LEAVEEVLDSGWL----TLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGI-------GPGDEVIVPSFTFVA 70 (352)
T ss_pred HHHHHHHHHCCCC----CCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCC-------CCCCEEEECCCCCHH
T ss_conf 7899999836997----79876999999999997859399976889999999998697-------883999989976398
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE
Q ss_conf 432123455321134799986433322210-0268875410123322223332222112462101232211022345721
Q gi|254780432|r 134 RTLATISAGGKLQYLEGFGPKIEGFDQAKF-CDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDAL 212 (392)
Q Consensus 134 ~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~-~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~l 212 (392)
+-.+-.+.+..|...+++...+ -|++.+++.+.+++.|||.=-+.|. +. + +..++++|+++|+.
T Consensus 71 --------t~~ai~~~G~~pv~~Di~~~t~~id~~~l~~~i~~~tkaIi~vh~~G~----~~--d-~~~i~~~~~~~~i~ 135 (352)
T cd00616 71 --------TANAILLLGATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPVHLYGN----PA--D-MDAIMAIAKRHGLP 135 (352)
T ss_pred --------HHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCC----CC--C-HHHHHHHHHHCCCE
T ss_conf --------999999859989984077785775889999762868709999689898----66--8-89999999977989
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCEEECC----CCCCCCCCCCCCCCCCC-CCCCCCC----C-----------CCC
Q ss_conf 31011003444455531011124545302103----44444434432100011-1222223----3-----------223
Q gi|254780432|r 213 LIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA----KGMGGGFPIGACLATNE-VAACMNQ----G-----------SHG 272 (392)
Q Consensus 213 lI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g----K~l~gG~P~sav~~~~~-i~~~~~~----~-----------~~~ 272 (392)
+|-|=-|+ +|- .+.-...|-.-|+.|+| |.|+.|- =|+++++++ +++.+.. + ..|
T Consensus 136 lIeDaA~a-~Gs---~~~~~~~G~~gd~~~fSF~~~K~it~ge-GG~i~tn~~~~~~~~~~lr~~G~~~~~~~~~~~~~G 210 (352)
T cd00616 136 VIEDAAQA-LGA---TYKGRKVGTFGDAGAFSFHPTKNLTTGE-GGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILG 210 (352)
T ss_pred EEEHHHHH-CCC---CCCCEECCCCCCCCCCCCCCCCCCCCCC-CEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEECC
T ss_conf 98022002-168---3467125664342534478775676777-349996999999999999965966998852467368
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCC-EEEE--EEEEC----CCHHHHH
Q ss_conf 453211110012334554320122210112100002688999988679707550464-0099--98724----9989999
Q gi|254780432|r 273 STYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQ-GLLI--GLKTV----FSPALLA 345 (392)
Q Consensus 273 ~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~-Gl~~--~ie~~----~~~~~~~ 345 (392)
.-|..+.+.++.++.-|+.++ +++++-+++.+...+.|..+.. ......-.+. ...+ .+-+. .+...+.
T Consensus 211 ~N~rmsel~Aaigl~qLk~ld--~~~~~R~~i~~~Y~~~L~~~~~--i~~~~~~~~~~~~~~~~~i~l~~~~~~~R~~l~ 286 (352)
T cd00616 211 YNYRLSEIQAAIGLAQLEKLD--EIIARRREIAERYKELLADLPG--IRLPDVPPGVKHSYHLYVIRLDPEAGESRDELI 286 (352)
T ss_pred CCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHH
T ss_conf 342258889999999999889--9999999999999998378998--161666999833557999998650210599999
Q ss_pred HHHHHCCEEEEECC---------------------------CCEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 99996898996268---------------------------9889955898688999999999999
Q gi|254780432|r 346 AKFRDECLLTAPSS---------------------------DNVVRILPPLTITAEEIHEGLERIE 384 (392)
Q Consensus 346 ~~l~~~Gll~~~~~---------------------------~~~irl~Ppl~it~~eid~~i~~l~ 384 (392)
+.|.++|+-++... .+.|.+=-.-.+|++|++.+++.|.
T Consensus 287 ~~L~~~gI~~~~~y~p~~~~~~~~~~~~~~~~~~pna~~i~~~~l~LP~~~~Lt~~di~~I~~~IK 352 (352)
T cd00616 287 EALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHCCCCEEEECCCHHHCHHHHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 999987998580283333384989725998899989999984979898999879999999999749
No 235
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.10 E-value=1.3e-09 Score=83.32 Aligned_cols=279 Identities=15% Similarity=0.141 Sum_probs=164.8
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101333123565554035677766543200134786002343546565432123455321134
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYL 148 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~ 148 (392)
.+..||....|+++|.+.-+.+.++.++||=-|+.+++-..- ++|. .||+-++.|.|.....- ...
T Consensus 47 ~R~gnPT~~~lE~~la~LEg~~~a~~~~SGMaAis~~l~~~l-------~~Gd-~vv~~~~~Yg~T~~l~~------~~~ 112 (386)
T PRK08045 47 SRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFL-------KPGD-LLVAPHDCYGGSYRLFD------SLA 112 (386)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHC-------CCCC-EEEECCCCCHHHHHHHH------HHH
T ss_conf 389886699999999998099837985678999999999707-------9999-89983786348999999------872
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 79998643332221002688754101233222233322221124621012322110223457213101100344445553
Q gi|254780432|r 149 EGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKL 228 (392)
Q Consensus 149 ~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~ 228 (392)
..++ -.+..++..|.+.+++.+.++...|++|..-.-- ...++ ++++.++|+++|+++|+|-... ..
T Consensus 113 ~~~g---i~v~~~d~~d~~~~~~~i~~~Tklv~~EspsNP~-l~v~D---i~~i~~~a~~~g~~~vvDNT~a------tP 179 (386)
T PRK08045 113 KRGC---YRVLFVDQGDEQALRAALAEKPKLVLVESPSNPL-LRVVD---IAKICHLAREAGAVSVVDNTFL------SP 179 (386)
T ss_pred CCCC---EEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CEECC---CHHHHHHHHHCCCEEEEECCCC------CH
T ss_conf 0795---7999969999899997537785599997799987-61057---6999999997699899827523------23
Q ss_pred CCCCCCCCCCCEEE--CCCCCCCC--CCCCCCCCCC-CCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHC--CCCCC
Q ss_conf 10111245453021--03444444--3443210001-112222233--2234532111100123345543201--22210
Q gi|254780432|r 229 FAYEWANVKPDIMT--IAKGMGGG--FPIGACLATN-EVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQS--DGFLE 299 (392)
Q Consensus 229 f~~e~~gi~PDi~~--~gK~l~gG--~P~sav~~~~-~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~ 299 (392)
+.++-...=.||++ ..|-|+|- .=.|+|++++ ++...+... ..|.+ .+|..|...+..|+-+.- +.-.+
T Consensus 180 ~~~~Pl~~GaDivvhS~TKyi~GhsD~l~G~vv~~~~~~~~~~~~~~~~~G~~--~~p~~a~l~~rGL~TL~lRm~~~~~ 257 (386)
T PRK08045 180 ALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPEVVTELAWWANNIGVT--GGAFDSYLLLRGLRTLVPRMELAQR 257 (386)
T ss_pred HCCCCCCCCCCEEEEECCEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCC--CCHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 11273003887899966613058877234899817788999999999985877--8988999998368877889999999
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHCC-EEEE----
Q ss_conf 112100002688999988679707550------------------46400999872499899999999689-8996----
Q gi|254780432|r 300 NVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDEC-LLTA---- 356 (392)
Q Consensus 300 ~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~G-ll~~---- 356 (392)
|+.++.+ ..++||. |..| .|.|-|++|++....... .++.++. ++..
T Consensus 258 nA~~lA~--------~L~~hp~-V~~V~yPgL~s~p~h~la~~q~~g~Ggm~sf~l~g~~~~~-~~f~~~l~lf~~a~Sl 327 (386)
T PRK08045 258 NAQAIVK--------YLQTQPL-VKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTL-RRFLGGLSLFTLAESL 327 (386)
T ss_pred HHHHHHH--------HHHCCCC-CCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCCHHHH-HHHHHHCCCCEECCCC
T ss_conf 9999999--------9863998-5379899998995779999708999735799965979999-9999708835560266
Q ss_pred --------------------------ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf --------------------------2689889955898688999999999999999985
Q gi|254780432|r 357 --------------------------PSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 357 --------------------------~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+..++.||++-- -|+.+++++=|+++|..-
T Consensus 328 Gg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~liRlSvG----lEd~eDLi~DL~qAL~aa 383 (386)
T PRK08045 328 GGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG----IEDGEDLIADLENGFRAA 383 (386)
T ss_pred CCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEE----ECCHHHHHHHHHHHHHHH
T ss_conf 88640003764235656899999866989596999960----099999999999999985
No 236
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.09 E-value=2.9e-10 Score=87.60 Aligned_cols=278 Identities=13% Similarity=0.167 Sum_probs=164.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101333123565554035677766543200134786002343546565432123455321134
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYL 148 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~ 148 (392)
.+..||....|+++|++.-+...++.+.||--|+.+++-+.. +| ..||+-+..|.|.....- .+.
T Consensus 49 ~R~~nPT~~~Le~~la~LE~~~~a~~~~SGmaAi~~~l~~l~--------~G-d~vv~~~~~Yg~T~~l~~------~~l 113 (390)
T PRK08064 49 SRSGNPTREALEDIIAELEGGTKGFAFASGMAAISTAFLLLS--------KG-DHVLISEDVYGGTYRMIT------EVL 113 (390)
T ss_pred ECCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHC--------CC-CEEEEECCCCCCHHHHHH------HHH
T ss_conf 489886699999999998299765502339999999999867--------99-999984888567999998------676
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 79998643332221002688754101233222233322221124621012322110223457213101100344445553
Q gi|254780432|r 149 EGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKL 228 (392)
Q Consensus 149 ~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~ 228 (392)
..++- .+..++..|.+.+++.+.++.-.|++|..-.-- ...++ ++++.++|+++|+++|+|-... ..
T Consensus 114 ~~~Gi---~~~f~d~~d~~~~~~~i~~~Tklv~~EspsNP~-l~v~D---i~~i~~iA~~~g~~~vVDNT~a------tP 180 (390)
T PRK08064 114 SRFGI---EHTFVDMTNLEEVAQNIKPNTKLFYVETPSNPL-LKVTD---IRGVVKLAKAHGCLTFVDNTFL------TP 180 (390)
T ss_pred HCCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---CHHHHHHHHHCCCEEEEECCCC------CC
T ss_conf 50987---999978857377997478884599997899988-74127---1999999988399699737733------50
Q ss_pred CCCCCCCCCCCEEE--CCCCCCCC-CCCCC-CCCC-CCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHC--CCCCC
Q ss_conf 10111245453021--03444444-34432-1000-11122222332--234532111100123345543201--22210
Q gi|254780432|r 229 FAYEWANVKPDIMT--IAKGMGGG-FPIGA-CLAT-NEVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQS--DGFLE 299 (392)
Q Consensus 229 f~~e~~gi~PDi~~--~gK~l~gG-~P~sa-v~~~-~~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~ 299 (392)
+.++-.+.=.||++ +.|-++|- =-+++ ++++ +++.+.+.... .|.+. +|..|...+..|+-+.- +.-.+
T Consensus 181 ~~~~Pl~~GaDivihS~TKyi~Ghsd~l~G~vv~~~~~~~~~~~~~~~~~G~~l--~p~~a~l~lrgl~TL~lRm~~~~~ 258 (390)
T PRK08064 181 LLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVL--GVQDCWLVLRGLKTLHVRLEHSAA 258 (390)
T ss_pred CCCCHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCC--CCHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 436857748869999636311588764041686178899999999998507767--905678987256868899999999
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHCC-EE------
Q ss_conf 112100002688999988679707550------------------46400999872499899999999689-89------
Q gi|254780432|r 300 NVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDEC-LL------ 354 (392)
Q Consensus 300 ~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~G-ll------ 354 (392)
|+.++ .++.++||. |..| .|-|.|++|++.. .. ..+++.+.- ++
T Consensus 259 nA~~i--------A~~L~~hp~-V~~V~yPgL~s~p~h~l~~~~~~g~Gg~~sf~l~~-~~-~~~~f~~~l~l~~~a~Sl 327 (390)
T PRK08064 259 TANKI--------AQYLQEHPK-VQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS-EE-AVRQFVSKVKLPVFAVSL 327 (390)
T ss_pred HHHHH--------HHHHHHCCC-CCEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECC-HH-HHHHHHHHCCCCEEEECC
T ss_conf 99999--------999971999-06798989999914999996289971499999899-99-999999838826221163
Q ss_pred -------EEE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -------962-----------------6898899558986889999999999999999852
Q gi|254780432|r 355 -------TAP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 355 -------~~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
..| ..++.|||+- --|+++++++-|+++|.++.
T Consensus 328 Gg~eSLi~~p~~~th~~~~~e~~~~~Gi~~~liRlSv----GlE~~~DLi~DL~qAL~~i~ 384 (390)
T PRK08064 328 GAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSV----GLENVDDLIADFEQALSYVE 384 (390)
T ss_pred CCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE----CCCCHHHHHHHHHHHHHHHH
T ss_conf 7744410476224663489999997598939499996----00899999999999999733
No 237
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.08 E-value=1.9e-09 Score=82.22 Aligned_cols=282 Identities=15% Similarity=0.189 Sum_probs=164.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 50687578189999986520101333123565554035677766543200134786002343546565432123455321
Q gi|254780432|r 66 HVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL 145 (392)
Q Consensus 66 ~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~ 145 (392)
+.-.+..||....|+++|+..-+.+.++.+.||--|+-+++--. . ++| ..||+-+..|.|.....-
T Consensus 32 ~~Y~R~~nPT~~~le~~la~LEg~~~a~~~sSGmaAi~~~l~~l-~------~~G-d~vl~~~~~Yg~t~~~~~------ 97 (369)
T cd00614 32 YIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLAL-L------KAG-DHVVASDDLYGGTYRLFE------ 97 (369)
T ss_pred CEECCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHH-C------CCC-CEEEEECCCCCCHHHHHH------
T ss_conf 63419988679999999999829980899657899999999985-2------889-999995788523999999------
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 13479998643332221002688754101233222233322221124621012322110223457213101100344445
Q gi|254780432|r 146 QYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRT 225 (392)
Q Consensus 146 ~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRt 225 (392)
.....++- .+..++..|.+.+++.+.++.-.|++|..-.-. ...++ ++++.++|+++|+++|+|-+.. |
T Consensus 98 ~~l~~~Gi---~v~~~d~~d~~~~~~~i~~~t~li~~EspsNP~-l~v~D---i~~i~~~A~~~g~~~vvDNT~a----t 166 (369)
T cd00614 98 RLLPKLGI---EVTFVDPDDPEALEAAIKPETKLVYVESPTNPT-LKVVD---IEAIAELAHEHGALLVVDNTFA----T 166 (369)
T ss_pred HHHHCCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CEECC---CHHHHHHHHHCCEEEEEECCCC----C
T ss_conf 77860892---389767878688997638785089996589997-06227---2999999976671799747743----1
Q ss_pred CCCCCCCCCCCCCCEEE--CCCCCCC-C-CCCCCCCCCC-CCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 55310111245453021--0344444-4-3443210001-112222233--22345321111001233455432012221
Q gi|254780432|r 226 GKLFAYEWANVKPDIMT--IAKGMGG-G-FPIGACLATN-EVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQSDGFL 298 (392)
Q Consensus 226 G~~f~~e~~gi~PDi~~--~gK~l~g-G-~P~sav~~~~-~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~~~l~ 298 (392)
.+.+.-+..=.||++ +.|-++| | .=.|+|+++. ++.+.+... ..|.+. +|..|...+..|+-+.- . +
T Consensus 167 --p~~~~Pl~~GaDivv~S~TKy~~Ghsd~l~G~v~~~~~~~~~~l~~~~~~~G~~~--sp~~a~l~lrgl~TL~l-R-m 240 (369)
T cd00614 167 --PYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTIL--SPFDAWLLLRGLKTLPL-R-M 240 (369)
T ss_pred --HHCCCHHHHCCCEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHCCCCHHH-H-H
T ss_conf --2015857748968999556312588775768998270888999999998645768--97888998860175999-9-9
Q ss_pred CHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHCC-EE-----
Q ss_conf 0112100002688999988679707550------------------46400999872499899999999689-89-----
Q gi|254780432|r 299 ENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDEC-LL----- 354 (392)
Q Consensus 299 ~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~G-ll----- 354 (392)
++..+.... +.++.++||. |..| .|.|-|++|++..+.+.. .++.++- ++
T Consensus 241 ~~~~~nA~~----lA~~L~~hp~-V~~V~yPgL~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~-~~f~~~l~lf~~~~S 314 (369)
T cd00614 241 ERHSENALK----VAEFLEKHPK-VERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAA-KKFLNALKLFSLAVS 314 (369)
T ss_pred HHHHHHHHH----HHHHHHCCCC-CCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCHHHH-HHHHHHCCCCEECCC
T ss_conf 999999999----9999971999-8879787898880489999768999717799976989999-999985890633126
Q ss_pred --------EEE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf --------962-----------------6898899558986889999999999999999
Q gi|254780432|r 355 --------TAP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 355 --------~~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
..+ ..++.||++- --|+.+++++-|+++|+
T Consensus 315 ~Gg~~SLi~~p~~~~~~~~~~~~~~~~Gi~~~liRlsv----GlEd~eDLi~DL~~AL~ 369 (369)
T cd00614 315 LGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSV----GIEDVEDLIADLEQALK 369 (369)
T ss_pred CCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE----ECCCHHHHHHHHHHHCC
T ss_conf 78767156776423553289999996697929699995----00999999999998539
No 238
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.08 E-value=1.9e-09 Score=82.25 Aligned_cols=276 Identities=16% Similarity=0.187 Sum_probs=161.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 06875781899999865201013331235655540356777665432001347860023435465654321234553211
Q gi|254780432|r 67 VSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ 146 (392)
Q Consensus 67 ~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~ 146 (392)
.-.+..||....|+++|.+.-+.+.++.+.||--|+.+.+-+. ++| ..||+-+..|.|.....- .
T Consensus 43 ~Y~R~~nPT~~~lE~~la~LEg~~~a~~~sSGmaAi~a~l~~~--------~~G-d~iv~~~~~YggT~~l~~------~ 107 (377)
T PRK07671 43 EYSRTGNPTRAALEELIAVLENGHAGFAFGSGMAAITAVMMLF--------SSG-DHVILTDDVYGGTYRVMT------K 107 (377)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHH--------CCC-CEEEECCCCCCCHHHHHH------H
T ss_conf 1418988669999999999839862775167889999999986--------899-989982898277899999------8
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 34799986433322210026887541012332222333222211246210123221102234572131011003444455
Q gi|254780432|r 147 YLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG 226 (392)
Q Consensus 147 ~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG 226 (392)
....++- .+..++..|.+.+++.+.++.-.|++|..-.-. ...++ ++++.++|+++|+++|+|-+..
T Consensus 108 ~l~~~Gi---~v~fvd~~d~~~~~~ai~~~Tklv~~EspsNP~-l~v~D---i~~ia~iA~~~g~~~vVDNT~a------ 174 (377)
T PRK07671 108 VLNRFGI---EHTFVDTTNLEEVEEAIRPNTKAIYVETPTNPL-LKITD---IKKISTLAKEKGLLTIVDNTFM------ 174 (377)
T ss_pred HHHHCCC---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CEECC---HHHHHHHHHHCCCEEEECCCCC------
T ss_conf 8863697---699943888688996478884499997899988-75016---7999999998299698517642------
Q ss_pred CCCCCCCCCCCCCEEE--CCCCCCC-CCCCCC-CCCC-CCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHC--CCC
Q ss_conf 5310111245453021--0344444-434432-1000-1112222233--2234532111100123345543201--222
Q gi|254780432|r 227 KLFAYEWANVKPDIMT--IAKGMGG-GFPIGA-CLAT-NEVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQS--DGF 297 (392)
Q Consensus 227 ~~f~~e~~gi~PDi~~--~gK~l~g-G~P~sa-v~~~-~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~--~~l 297 (392)
..+.++-...=.||++ ..|-|+| |=-+++ |+++ +++.+.+... ..|.+. +|..|.-.+..|+-+.- +.-
T Consensus 175 tP~~~~Pl~~GaDivvhS~TKyl~GHsD~~~G~vv~~~~~~~~~~~~~~~~~G~~l--sP~~a~L~lRGL~TL~lRm~r~ 252 (377)
T PRK07671 175 TPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGIL--GPQDSFLLLRGLKTLGIRMEEH 252 (377)
T ss_pred CCCCCCHHHHCCCEEEEECCCEECCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCC--CHHHHHHHHCCCCCHHHHHHHH
T ss_conf 20227877728878999457530478775252899677899999999998635778--8477789870688699999999
Q ss_pred CCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHC-CEE----
Q ss_conf 10112100002688999988679707550------------------4640099987249989999999968-989----
Q gi|254780432|r 298 LENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDE-CLL---- 354 (392)
Q Consensus 298 ~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~-Gll---- 354 (392)
.+|+.++ .++.++||. |..| +|.|-|++|++. ..+. ..++.++ -++
T Consensus 253 ~~nA~~v--------A~~L~~hp~-V~~V~yPgL~s~p~h~la~~~~~g~gg~~sf~l~-~~~~-a~~f~~~L~l~~~a~ 321 (377)
T PRK07671 253 ETNSRAI--------AEFLNNHPK-VNKVYYPGLPSHPNHELAKEQANGFGGMISFDVG-SEET-LNKVLERLQYFTLAE 321 (377)
T ss_pred HHHHHHH--------HHHHHHCCC-CCEEECCCCCCCCHHHHHHHCCCCCCEEEEEEEC-CHHH-HHHHHHHCCCCEECC
T ss_conf 9999999--------999861998-4499676888992599998558997559999938-7899-999998088254503
Q ss_pred ---------EEE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf ---------962-----------------689889955898688999999999999999
Q gi|254780432|r 355 ---------TAP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 355 ---------~~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
..| ..++.|||+- --|+.+++++=|+++|
T Consensus 322 SlGg~eSLi~~Pa~~th~~~~~e~r~~~Gi~~~liRlSv----GlEd~eDLi~DL~qAL 376 (377)
T PRK07671 322 SLGAVESLISIPAQMTHASIPADRRKELGITDGLIRISV----GIEDGEDLIEDLAQAL 376 (377)
T ss_pred CCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE----CCCCHHHHHHHHHHHC
T ss_conf 568776021386111555599999997597929599993----3299999999999854
No 239
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.07 E-value=2.6e-09 Score=81.32 Aligned_cols=308 Identities=18% Similarity=0.237 Sum_probs=173.3
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC---CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 9999999999997314506875781899999865201013---3312356555403567776654320013478600234
Q gi|254780432|r 50 HPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFA---DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVT 126 (392)
Q Consensus 50 ~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~---~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~ 126 (392)
+|+|.+|+.+++-. |...-|. ....+..++|....+- +-+.+.-|||-|+|+|+.=. . .+| .+++.
T Consensus 17 ~~~V~~am~~~~~~--h~s~~F~-~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl------~-~pg-dkVLv 85 (383)
T COG0075 17 PPRVLLAMARPMVG--HRSPDFV-GIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASL------V-EPG-DKVLV 85 (383)
T ss_pred CHHHHHHHCCCCCC--CCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHH------C-CCC-CEEEE
T ss_conf 99999974577777--7798899-999999999999966888747997688379999999860------5-899-86999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHCC--CCCCCCC---CCCCCCCCCCCCCCHHHH
Q ss_conf 354656543212345532113479998643--332221002688754101--2332222---333222211246210123
Q gi|254780432|r 127 FEGAFHGRTLATISAGGKLQYLEGFGPKIE--GFDQAKFCDLQSLKNQIS--NDTAAIL---IEPIQGEGGVRKVPEEFL 199 (392)
Q Consensus 127 ~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~--~~~~~~~~d~~~l~~~~~--~~iAavi---~Epv~g~~G~~~~~~~~l 199 (392)
..++.-|.-+.-+.-. ++.... ...--...|.+.+++.+. .++.+|. .|+ +.|+..| +
T Consensus 86 ~~nG~FG~R~~~ia~~--------~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ET---STGvlnp----l 150 (383)
T COG0075 86 VVNGKFGERFAEIAER--------YGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNET---STGVLNP----L 150 (383)
T ss_pred EECCHHHHHHHHHHHH--------HCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEECCC---CCCCCCC----H
T ss_conf 8278077799999998--------29966998478888799999999985289950899981157---5201376----9
Q ss_pred HHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE--CCCCCCCCCC-CCCCCCCCCCCCCCCCCC------
Q ss_conf 2211022345721310110034444555310111245453021--0344444434-432100011122222332------
Q gi|254780432|r 200 QQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMT--IAKGMGGGFP-IGACLATNEVAACMNQGS------ 270 (392)
Q Consensus 200 ~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~--~gK~l~gG~P-~sav~~~~~i~~~~~~~~------ 270 (392)
+.+.++|++||.++|+|-|-+ +| |..+-.+.||| |+++ --|+|++ -| ++.+..+++..+.+....
T Consensus 151 ~~I~~~~k~~g~l~iVDaVsS-~G--g~~~~vd~wgi--Dv~itgSQK~l~~-PPGla~v~~S~~a~~~~~~~~~~~~yl 224 (383)
T COG0075 151 KEIAKAAKEHGALLIVDAVSS-LG--GEPLKVDEWGI--DVAITGSQKALGA-PPGLAFVAVSERALEAIEERKHPSFYL 224 (383)
T ss_pred HHHHHHHHHCCCEEEEEECCC-CC--CCCCCHHHCCC--CEEEECCCHHCCC-CCCCCEEEECHHHHHHHHCCCCCCEEE
T ss_conf 999999997298899982345-78--81254444284--5899767201158-986143677799999985588876022
Q ss_pred -----------CCCCCCCCCCCHH-HHHHHHHHHHCCC---CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEE
Q ss_conf -----------2345321111001-2334554320122---210112100002688999988679707550464009998
Q gi|254780432|r 271 -----------HGSTYGGNVLAMV-LGEKVLNIIQSDG---FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGL 335 (392)
Q Consensus 271 -----------~~~T~~gnpl~~a-aa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~i 335 (392)
.+.|..-.|+..- +-.++|+.++++. .++|-+.+++.++.+++++--+ -+..+-+-.-.+.++
T Consensus 225 DL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~--~~~~~~~~s~tvta~ 302 (383)
T COG0075 225 DLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLE--LFADPERRSPTVTAI 302 (383)
T ss_pred CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCEEEE
T ss_conf 199999988536898889877899999999999998657999999999999999999976984--236865578854899
Q ss_pred EECCC--HHHHHHHHHHC-CEEEEEC----CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 72499--89999999968-9899626----898899558986889999999999999999852
Q gi|254780432|r 336 KTVFS--PALLAAKFRDE-CLLTAPS----SDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 336 e~~~~--~~~~~~~l~~~-Gll~~~~----~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
..+.. ...+...++++ |+.+.+. .+.++|+.--=.++.+++..++.+|+.++.++-
T Consensus 303 ~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 303 KVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred ECCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 789887729999999984799964565455761899835756788999999999999999749
No 240
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.07 E-value=1.4e-10 Score=89.63 Aligned_cols=312 Identities=16% Similarity=0.219 Sum_probs=181.7
Q ss_pred HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCC
Q ss_conf 43578789999999999997314506875781899999865201013331235655540356777-66543200134786
Q gi|254780432|r 43 VNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIK-TARRYHYMAGKTNK 121 (392)
Q Consensus 43 ~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aik-lar~~~~~~g~t~r 121 (392)
++.+.+.+++=..++ =+++...++-.+..||....|.+|+...-+.--...+.||-.|...|+- +++ +|
T Consensus 32 tTsy~F~d~~haa~l-F~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~--------aG- 101 (426)
T COG2873 32 TTSYVFDDTDHAAAL-FGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAG--------AG- 101 (426)
T ss_pred EEEEECCCHHHHHHH-HCCCCCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCC--------CC-
T ss_conf 410122888999998-57776773235335830899999999861454113331335899999998645--------88-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 00234354656543212345532113479998643332221002688754101233222233322221124621012322
Q gi|254780432|r 122 FRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQ 201 (392)
Q Consensus 122 ~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~ 201 (392)
+.|++-..=|-|.. .-++.+ .+.++. .+.++...|.+.+++.+.++.-+|++|+|-.-++.+ +. +++
T Consensus 102 D~iVss~~LYGGT~-~lf~~t-----l~~~Gi---~v~fvd~~d~~~~~~aI~~nTkavf~EtigNP~~~v-~D---ie~ 168 (426)
T COG2873 102 DNIVSSSKLYGGTY-NLFSHT-----LKRLGI---EVRFVDPDDPENFEAAIDENTKAVFAETIGNPGLDV-LD---IEA 168 (426)
T ss_pred CEEEEECCCCCCHH-HHHHHH-----HHHCCC---EEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCCCC-CC---HHH
T ss_conf 70675132337548-899988-----886481---799927999899998738224068787516887663-57---799
Q ss_pred HHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE--CCCCCCC-CCCCCCCCCCCCCCCCC-----------C
Q ss_conf 11022345721310110034444555310111245453021--0344444-43443210001112222-----------2
Q gi|254780432|r 202 LRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMT--IAKGMGG-GFPIGACLATNEVAACM-----------N 267 (392)
Q Consensus 202 l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~--~gK~l~g-G~P~sav~~~~~i~~~~-----------~ 267 (392)
+.++|+++|++||+|-..+. .|-++-.+.-.|||+ ..|-+|| |-.+|++++..--.+.- +
T Consensus 169 ia~iAh~~gvpliVDNT~at------pyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~ 242 (426)
T COG2873 169 IAEIAHRHGVPLIVDNTFAT------PYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPD 242 (426)
T ss_pred HHHHHHHCCCCEEEECCCCC------CEECCHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 99999875993898367773------004366561887799860301267765424079867754554577786667898
Q ss_pred CCCCCCCCCC--CCCCHHHHHHHHHHHHCCC----------CCCHHHHHCCHH----H--HHHHHHHHHCCCEEEEE---
Q ss_conf 3322345321--1110012334554320122----------210112100002----6--88999988679707550---
Q gi|254780432|r 268 QGSHGSTYGG--NVLAMVLGEKVLNIIQSDG----------FLENVINIAKIL----F--EGLTAIKNRFPNMFLEV--- 326 (392)
Q Consensus 268 ~~~~~~T~~g--npl~~aaa~a~L~~l~~~~----------l~~~~~~~g~~l----~--~~L~~l~~~~~~~v~~v--- 326 (392)
+..|+-.|.- -+.+.+....+. .+++-. ++.-+..+.-++ . ..+.++.+.||. |.-|
T Consensus 243 p~YhGl~~~~~~g~~af~~~~r~~-~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~Hpk-V~~V~Yp 320 (426)
T COG2873 243 PSYHGLVYTETFGNAAFIIKARVQ-LLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPK-VAWVNYP 320 (426)
T ss_pred CCCCCEEHHHHCCCHHHHHHHHHH-HHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC-EEEEECC
T ss_conf 442554325422407899999998-88751655693788999834336677899987769999999860997-1034279
Q ss_pred ----------------CCCEEEEEEEECCCH---HHHHHHHH--H--------CCEEEEE-----------------CCC
Q ss_conf ----------------464009998724998---99999999--6--------8989962-----------------689
Q gi|254780432|r 327 ----------------RGQGLLIGLKTVFSP---ALLAAKFR--D--------ECLLTAP-----------------SSD 360 (392)
Q Consensus 327 ----------------RG~Gl~~~ie~~~~~---~~~~~~l~--~--------~Gll~~~-----------------~~~ 360 (392)
+|.|.++.++..... +.+...++ . +-|.+.| ..+
T Consensus 321 gL~~~~~h~la~kyl~~g~gavltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~eee~~~aGvt~ 400 (426)
T COG2873 321 GLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTP 400 (426)
T ss_pred CCCCCCCHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCCHHHHHHCCCCC
T ss_conf 98889435779863647864389987067189999999999999860354656427766774012206999998469987
Q ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 88995589868899999999999999998
Q gi|254780432|r 361 NVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 361 ~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
..||++ +--|++++++.=|++++.+
T Consensus 401 ~~IRlS----VGIEd~~DiiaDl~qAl~~ 425 (426)
T COG2873 401 DLIRLS----VGIEDIDDIIADLEQALEA 425 (426)
T ss_pred CCEEEE----ECCCCHHHHHHHHHHHHHC
T ss_conf 837998----4568789999989999851
No 241
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.06 E-value=5.6e-10 Score=85.69 Aligned_cols=260 Identities=17% Similarity=0.121 Sum_probs=152.5
Q ss_pred HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 43578789999999999997314506875781899999865201013331235655540356777665432001347860
Q gi|254780432|r 43 VNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKF 122 (392)
Q Consensus 43 ~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~ 122 (392)
+..+-+.+.+=.+++-. .+...+.-.+..||....|+++|.+.-+.+.++.+.||--|+.+++- +.. ++|.
T Consensus 43 sstf~f~~~~~~~~~f~-g~~~g~~YsR~~NPT~~~lE~~la~LEgg~~a~~~sSGMaAi~~~ll-~ll------~~Gd- 113 (406)
T PRK07810 43 TSGYVYESAAAAEKAFT-GELDRYVYSRYGNPTVSMFEERLRLIEGAPACFATASGMAAVFTALG-ALL------GAGD- 113 (406)
T ss_pred CCCEECCCHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH-HHH------CCCC-
T ss_conf 77711499999999837-98679613089886289999999997099859984389999999999-972------8999-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 02343546565432123455321134799986433322210026887541012332222333222211246210123221
Q gi|254780432|r 123 RIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQL 202 (392)
Q Consensus 123 ~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l 202 (392)
.||+-+..|.|.....- .....++- .+..+..+|++++++.+.++..+|++|.+-.-.. ..++ +++|
T Consensus 114 ~iv~~~~~YGgT~~l~~------~~l~~~GI---~~~~vd~~d~~~~~~ai~~~Tk~v~~EtpsNP~l-~v~D---i~ai 180 (406)
T PRK07810 114 RLVAARSLFGSCFVVCN------EILPRWGV---ETVFVDGDDLSQWEEALSVPTQAVFFETPSNPMQ-SLVD---IAAV 180 (406)
T ss_pred EEEEECCCCCCHHHHHH------HHHHCCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCC-EECC---HHHH
T ss_conf 89983798637799999------77644874---9999689885999975588862899844899985-6116---7999
Q ss_pred HCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE--CCCCCCC-CCC-CCCCCCCCCCCC-CCCCC--CCCCCC
Q ss_conf 1022345721310110034444555310111245453021--0344444-434-432100011122-22233--223453
Q gi|254780432|r 203 RKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMT--IAKGMGG-GFP-IGACLATNEVAA-CMNQG--SHGSTY 275 (392)
Q Consensus 203 ~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~--~gK~l~g-G~P-~sav~~~~~i~~-~~~~~--~~~~T~ 275 (392)
.++|+++|+++|+|-..+ ..+.++-...=.||++ ..|-|+| |=- .|+|+++++.++ .+... ..|.+.
T Consensus 181 a~iA~~~g~~~vVDNTfa------TP~~~rPl~~GADiVvhS~TKyi~GHsd~lgG~v~~~~~~~~~~~~~~~~~~G~~l 254 (406)
T PRK07810 181 TELAHAAGAKVVLDNVFA------TPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAL 254 (406)
T ss_pred HHHHHHCCCEEEEECCCC------CCCCCCCHHCCCCEEEEECCCCCCCCCCEECCEEECCHHHHHHHHHHHHHHCCCCC
T ss_conf 999997498599978877------75535842128988999535323688760363695267888999999999738989
Q ss_pred CCCCCCHHHHHHHHHHHH--CCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEE------------------ECCCEEEEEE
Q ss_conf 211110012334554320--12221011210000268899998867970755------------------0464009998
Q gi|254780432|r 276 GGNVLAMVLGEKVLNIIQ--SDGFLENVINIAKILFEGLTAIKNRFPNMFLE------------------VRGQGLLIGL 335 (392)
Q Consensus 276 ~gnpl~~aaa~a~L~~l~--~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~------------------vRG~Gl~~~i 335 (392)
+|..|.-.+..|+-+. =+...+|+.++ .++.++||. |.. .+|-|-|++|
T Consensus 255 --sP~~a~l~lrGL~TL~lRm~r~~~nA~~v--------A~~L~~hp~-V~~V~yPgL~shp~h~la~r~~~g~G~~~sf 323 (406)
T PRK07810 255 --SAFNAWTLLKGLETLAIRVQHSNASALRI--------AEFLEGHPA-VRWVRYPYLPSHPQYDLAKRQMSGGGTVVTF 323 (406)
T ss_pred --CHHHHHHHHCCCCCHHHHHHHHHHHHHHH--------HHHHHHCCC-CCEEECCCCCCCCCHHHHHHHCCCCCCCEEE
T ss_conf --87888998706897999999999999999--------999973998-1379805787781778998447899863289
Q ss_pred EECCCH
Q ss_conf 724998
Q gi|254780432|r 336 KTVFSP 341 (392)
Q Consensus 336 e~~~~~ 341 (392)
++....
T Consensus 324 ~l~~~~ 329 (406)
T PRK07810 324 ELDAPE 329 (406)
T ss_pred EEECCC
T ss_conf 980361
No 242
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.06 E-value=2.4e-09 Score=81.51 Aligned_cols=279 Identities=15% Similarity=0.125 Sum_probs=161.7
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 68757818999998652010133312356555403567776654320013478600234354656543212345532113
Q gi|254780432|r 68 SNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQY 147 (392)
Q Consensus 68 ~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~ 147 (392)
-.+..||....|+++|.+.-+...++.+.||=-|+.+++- +.. ++|. .||+-+..|.|.....- ..
T Consensus 47 Y~R~~nPT~~~le~~la~LEg~~~a~~~~SGmaAis~~~l-~ll------~~Gd-~iv~~~~~Yg~T~~l~~------~~ 112 (388)
T PRK08861 47 YTRSGNPNRGLLEQALSELESGKGAVVTNCGTSALNLWVS-ALL------GPDD-LIVAPHDCYGGTYRLFN------TR 112 (388)
T ss_pred ECCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH-HHC------CCCC-EEEECCCCCCCHHHHHH------HH
T ss_conf 4489886599999999998499837996378999999999-836------8999-89986898550689999------89
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 47999864333222100268875410123322223332222112462101232211022345721310110034444555
Q gi|254780432|r 148 LEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK 227 (392)
Q Consensus 148 ~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~ 227 (392)
...++ -.+..++..|.+.+++.+.++.-.|++|..-.-. ..+++ ++++.++|+++|+++|+|-+.. .
T Consensus 113 l~~~g---i~~~~~d~~d~~~~~~~i~~~Tkli~~EspsNP~-l~v~D---i~~i~~~A~~~g~~~vvDNT~a------t 179 (388)
T PRK08861 113 ANKGD---FKVLFVDQSDAAALDAALAKKPKLILLETPSNPL-VRVVD---IAEVCQKAKQVGALVAVDNTFL------T 179 (388)
T ss_pred HHHCC---EEEEEECCCCCHHHHHHCCCCCEEEEEECCCCCC-CEEEC---CHHHHHHHHHCCCEEEEECCCC------H
T ss_conf 86288---6999989998278997348785399984489998-36656---5999999987399599978851------2
Q ss_pred CCCCCCCCCCCCEEE--CCCCCCCC-CCCCC-CCCCC-CCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHH--CCCCC
Q ss_conf 310111245453021--03444444-34432-10001-112222233--223453211110012334554320--12221
Q gi|254780432|r 228 LFAYEWANVKPDIMT--IAKGMGGG-FPIGA-CLATN-EVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQ--SDGFL 298 (392)
Q Consensus 228 ~f~~e~~gi~PDi~~--~gK~l~gG-~P~sa-v~~~~-~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~--~~~l~ 298 (392)
.+.++-...=.||++ ..|-|+|. =-+++ |++++ +..+.+... ..|.+ .+|..|...+..|+-+. =+.-.
T Consensus 180 P~~~~Pl~~GaDivvhS~TKyi~GHsDvlgG~vv~~~~~~~~~l~~~~~~~G~~--~sP~~a~l~~RGL~TL~lRm~~~~ 257 (388)
T PRK08861 180 PVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGAT--GTPFDSYMTLRGIRTLGARMRVHE 257 (388)
T ss_pred HHHCCCHHCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCC--CCHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 530372103887899962401258887502189507488889999999851777--886777888547897889999999
Q ss_pred CHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHC-CEEE----
Q ss_conf 0112100002688999988679707550------------------4640099987249989999999968-9899----
Q gi|254780432|r 299 ENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDE-CLLT---- 355 (392)
Q Consensus 299 ~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~-Gll~---- 355 (392)
+++.++. +..++||. |..| .|.|.|++|++....+... ++.++ -++.
T Consensus 258 ~nA~~lA--------~~L~~hp~-V~~V~yPgL~shp~h~lak~~~~g~ggm~sf~l~~~~~~~~-~f~~~l~lf~~a~S 327 (388)
T PRK08861 258 ESAQEIL--------KYLQTQSL-VGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLK-VFVKALKLFSLAES 327 (388)
T ss_pred HHHHHHH--------HHHHHCCC-CCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHH-HHHHHCCCCEECCC
T ss_conf 8699999--------99984999-27898989999926999986456986269999779899999-99983880533116
Q ss_pred ---------EE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf ---------62-----------------68988995589868899999999999999998
Q gi|254780432|r 356 ---------AP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 356 ---------~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
.| ..++.|||+.- -|+.+++++=|+++|.+
T Consensus 328 lGg~eSLi~~p~s~sh~~~~~~~~~~~gi~~~liRlsVG----lEd~eDLi~Dl~qAL~~ 383 (388)
T PRK08861 328 LGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVG----LEDAQDLIADLKQAFAK 383 (388)
T ss_pred CCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHH
T ss_conf 687750213775455411899999866989496999942----19999999999999999
No 243
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.05 E-value=4.1e-09 Score=80.06 Aligned_cols=280 Identities=12% Similarity=0.091 Sum_probs=167.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101333123565554035677766543200134786002343546565432123455321134
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYL 148 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~ 148 (392)
.+..||....|+++|+..-+.+.++.+.||--|+-+++- +.. ++| ..||+-+..|.|...... ...
T Consensus 57 sR~~NPT~~~lE~~la~LEg~~~a~~fsSGmaAis~~ll-~ll------~~G-d~il~~~~~YggT~~l~~------~~l 122 (395)
T PRK08114 57 GRRGTLTHFSLQEAMCELEGGAGCALYPCGAAAVANSIL-AFV------EQG-DHVLMTGTAYEPSQDFCS------KIL 122 (395)
T ss_pred ECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH-HHH------CCC-CEEEECCCCCHHHHHHHH------HHH
T ss_conf 789887699999999997099737982688999999999-970------899-989976888568999999------999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC--CEEEECCCCCCCCCCC
Q ss_conf 79998643332221002688754101233222233322221124621012322110223457--2131011003444455
Q gi|254780432|r 149 EGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDID--ALLIFDEVQTGYGRTG 226 (392)
Q Consensus 149 ~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g--~llI~DEV~tG~GRtG 226 (392)
..++- .+..+...|.+.+++.+.++.-.|++|+.-.-. ...++ ++.+.++|+++| +++|+|-+..
T Consensus 123 ~~~Gi---~v~~~d~~d~~~~~~~i~~~Tklv~~EspsNP~-l~v~D---i~~i~~~a~~~~~~~~~vvDNTfa------ 189 (395)
T PRK08114 123 SKLGV---TTTWFDPLIGADIAKLIQPNTKVVFLESPGSIT-MEVHD---IPAIVAAVRSVAPDAVIMIDNTWA------ 189 (395)
T ss_pred HHCCC---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCCCEEEECCCCC------
T ss_conf 87595---699857999999997468775499994489866-52267---999999998605686899718878------
Q ss_pred CCCCCCCCCCCCCEE--ECCCCCCC-C-CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHH--CCCCC
Q ss_conf 531011124545302--10344444-4-34432100011122222332--23453211110012334554320--12221
Q gi|254780432|r 227 KLFAYEWANVKPDIM--TIAKGMGG-G-FPIGACLATNEVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQ--SDGFL 298 (392)
Q Consensus 227 ~~f~~e~~gi~PDi~--~~gK~l~g-G-~P~sav~~~~~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~--~~~l~ 298 (392)
..+.++-...=.||+ -..|-|+| | .-.|++++++++++.+.... .|.+. +|..|.-.+..|+-+. =+.-.
T Consensus 190 tP~~~~Pl~~GaDivihS~TKyl~GHsDv~~G~v~~~~~~~~~l~~~~~~~G~~~--~p~~a~Ll~RGL~TL~lRm~~~~ 267 (395)
T PRK08114 190 AGVLFKALDFGIDISIQAGTKYLIGHSDAMIGTAVANARCWEQLRENSYLMGQMV--DADTAYMTSRGLRTLGVRLKQHQ 267 (395)
T ss_pred CCCCCCCCCCCCEEEEEECCCEECCCCCCEEEEEECCHHHHHHHHHHHHHHCCCC--CHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 8765544466674999966650057788524788527889999999999737879--97999999756763889999999
Q ss_pred CHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCC--HHHHHHHHHHCCEE----
Q ss_conf 0112100002688999988679707550------------------46400999872499--89999999968989----
Q gi|254780432|r 299 ENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFS--PALLAAKFRDECLL---- 354 (392)
Q Consensus 299 ~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~--~~~~~~~l~~~Gll---- 354 (392)
+|+.++ .++.++||. |..| +|-|-|++|++... .+...+.+-.--++
T Consensus 268 ~nA~~v--------A~~L~~hp~-V~~V~yPgL~shp~h~la~~~~~g~gg~~sf~l~~~~~~~~~~~fl~~l~lf~~a~ 338 (395)
T PRK08114 268 ESSLKV--------AEWLAEHPE-VARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEELANYLDNFSLFSMAY 338 (395)
T ss_pred HHHHHH--------HHHHHCCCC-CCEEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEE
T ss_conf 999999--------999963999-75898999989843899997578987799999857779999999998089265820
Q ss_pred --------EE----------------ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf --------96----------------2689889955898688999999999999999985
Q gi|254780432|r 355 --------TA----------------PSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 355 --------~~----------------~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+. +..++.||++. --|+.+++++=|+++|.+|
T Consensus 339 SlGg~eSLi~~~~~~~~~~~~~~~~~~i~~~liRlSv----GlEd~eDLi~DL~qAL~~i 394 (395)
T PRK08114 339 SWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHI----GLEDVDDLIADLAAGFARI 394 (395)
T ss_pred CCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCEEEEEE----CCCCHHHHHHHHHHHHHHH
T ss_conf 5176340221798544443680344399979799994----2399899999999999833
No 244
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.04 E-value=8.4e-09 Score=78.01 Aligned_cols=168 Identities=19% Similarity=0.216 Sum_probs=114.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45068757818999998652010133312356555403567776654320013478600234354656543212345532
Q gi|254780432|r 65 WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 65 ~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
.+.-.++.||....|+++|...-+.+.++.+.||--|+.+++- +.. ++|. .||+-+..|.|.....-
T Consensus 55 g~~YsR~gNPT~~~LE~~la~LEgg~~a~~~sSGmaAis~~l~-~ll------~~Gd-~iv~~~~~YggT~~l~~----- 121 (433)
T PRK08134 55 GHVYSRISNPTTAVLEERVAALEGGVGAIATASGQAALHLAIA-TLM------GAGS-HIVASSALYGGSHNLLH----- 121 (433)
T ss_pred CCEECCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH-HHC------CCCC-EEEECCCEECCHHHHHH-----
T ss_conf 9601499886699999999998099827985388999999999-748------9999-89971880773799999-----
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 11347999864333222100268875410123322223332222112462101232211022345721310110034444
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
.....++- .+..+...|.+.+++.+.+++..|++|+.-.-- ..+++ ++++.++|+++|+++|+|-+.+
T Consensus 122 -~~l~~~Gi---~~~~vd~~d~~~~~~~i~~~Tklv~~EspsNP~-l~v~D---i~aia~iA~~~g~~~vVDNT~a---- 189 (433)
T PRK08134 122 -YTLPRFGI---ETTFVKPRDIDGWRAAIRPNTRLLFGETLGNPG-LEVLD---IPTVAAIAHEAGVPLLVDSTFT---- 189 (433)
T ss_pred -HHHHHCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCEEEEECCCC----
T ss_conf -87763483---799988978467887559875289985389997-50358---9999999975676199716651----
Q ss_pred CCCCCCCCCCCCCCCEEE--CCCCCCC-CCCCCCCCCC
Q ss_conf 555310111245453021--0344444-4344321000
Q gi|254780432|r 225 TGKLFAYEWANVKPDIMT--IAKGMGG-GFPIGACLAT 259 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~~--~gK~l~g-G~P~sav~~~ 259 (392)
| .+.++-+..=.||++ ..|-|+| |=-+++++..
T Consensus 190 t--P~~~~Pl~~GaDivvhS~TKYl~GHsDvlgG~vv~ 225 (433)
T PRK08134 190 T--PYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred H--HHHCCHHHHCCCEEEEECCEEECCCCCEEEEEEEC
T ss_conf 1--53058055289889996546725887547789851
No 245
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.04 E-value=3.8e-09 Score=80.25 Aligned_cols=166 Identities=16% Similarity=0.196 Sum_probs=113.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4506875781899999865201013331235655540356777-665432001347860023435465654321234553
Q gi|254780432|r 65 WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIK-TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGG 143 (392)
Q Consensus 65 ~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aik-lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~ 143 (392)
.+.-.+..||....|+++|++.-+.+.++.+.||--|+.+++. ++ ++|. .||+-+..|.|.....-
T Consensus 54 g~~YsR~gNPT~~~lE~~la~LEgg~~a~~~sSGmaAi~~~l~~ll--------~~Gd-~vv~~~~~Yggt~~~~~---- 120 (426)
T PRK05994 54 GNIYTRITNPTTAVLEERVAALEGGTAALAVASGHAAQFLVFHTLL--------QPGD-EFIAARKLYGGSINQFG---- 120 (426)
T ss_pred CCEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH--------CCCC-EEEECCCCCHHHHHHHH----
T ss_conf 9711499886699999999998599728994488999999999972--------7899-89984874268999999----
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC
Q ss_conf 21134799986433322210026887541012332222333222211246210123221102234572131011003444
Q gi|254780432|r 144 KLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG 223 (392)
Q Consensus 144 ~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 223 (392)
.....++- .+..++..|.+.+++.+.++.-.|++|..-.-. ...++ ++.+.++|+++|+++|+|-+..
T Consensus 121 --~~l~~~Gi---~v~~~d~~d~~~~~~~i~~~T~lv~~EspsNP~-l~v~D---i~~ia~iA~~~g~~~vVDNT~a--- 188 (426)
T PRK05994 121 --HAFKSFGW---QVRWADADDPASFEAAITPRTKAIFIESIANPG-GTITD---IEAIAEVAHRAGLPLIVDNTLA--- 188 (426)
T ss_pred --HHHHHCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCEEEEECCCC---
T ss_conf --99860886---999978998388997368875499998789988-72347---8999999997199178635652---
Q ss_pred CCCCCCCCCCCCCCCCEEE--CCCCCCC-CCCCCCCCC
Q ss_conf 4555310111245453021--0344444-434432100
Q gi|254780432|r 224 RTGKLFAYEWANVKPDIMT--IAKGMGG-GFPIGACLA 258 (392)
Q Consensus 224 RtG~~f~~e~~gi~PDi~~--~gK~l~g-G~P~sav~~ 258 (392)
| .+.+.-...=.||++ ..|-|+| |=-+++++.
T Consensus 189 -t--P~~~~Pl~~GaDivvhS~TKyi~GHsDvlgG~vv 223 (426)
T PRK05994 189 -S--PYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIV 223 (426)
T ss_pred -H--HHHCCHHHHCCCEEEEECCCCCCCCCCEEEEEEE
T ss_conf -0--4315867748988999645103588763788885
No 246
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.04 E-value=7e-10 Score=85.07 Aligned_cols=235 Identities=15% Similarity=0.152 Sum_probs=144.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 875781899999865201013331235655540356777-6654320013478600234354656543212345532113
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIK-TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQY 147 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aik-lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~ 147 (392)
.+..||....|+++|...-+.+.++.+.||--|+.+++- +++ +|- .||+-+..|.|.... + . ..
T Consensus 55 sR~gNPT~~~lE~~lA~LEgg~~a~~~sSGmaAi~~~l~~ll~--------~GD-hiv~~~~~YGgT~~l-~---~--~~ 119 (405)
T PRK08776 55 TRSGNPTRDLLGEALAELEGGAGGVITSTGMGAINLVLNALLQ--------PGD-TLVVPHDAYGGSWRL-F---N--AL 119 (405)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHC--------CCC-EEEECCCCCHHHHHH-H---H--HH
T ss_conf 1898878999999999982999689946799999999999738--------999-899868861179999-9---9--98
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 47999864333222100268875410123322223332222112462101232211022345721310110034444555
Q gi|254780432|r 148 LEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK 227 (392)
Q Consensus 148 ~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~ 227 (392)
...++ -.+..+...|.+.+++.+.++.-.|++|+.-.-. ...++ ++++.++|+++|+++|+|-+.+ .
T Consensus 120 ~~~~g---i~~~~vd~~d~~~~~~~i~~~Tklv~~EtpsNP~-l~v~D---i~~ia~iA~~~g~~~vVDNTfa------t 186 (405)
T PRK08776 120 AKKGH---FALITADLTDPRSLADALAQSPKLVLIETPSNPL-LRITD---LRFVIEAAHKVGALTVVDNTFL------S 186 (405)
T ss_pred HHHCC---EEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CEEEC---CHHHHHHHHHCCCEEEEECCCC------C
T ss_conf 75488---8999968999899997437776599998899998-86027---5999999987399799979976------4
Q ss_pred CCCCCCCCCCCCEE--ECCCCCCCC-CC-CCCCCCCC-CCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHH--CCCCC
Q ss_conf 31011124545302--103444444-34-43210001-11222223--3223453211110012334554320--12221
Q gi|254780432|r 228 LFAYEWANVKPDIM--TIAKGMGGG-FP-IGACLATN-EVAACMNQ--GSHGSTYGGNVLAMVLGEKVLNIIQ--SDGFL 298 (392)
Q Consensus 228 ~f~~e~~gi~PDi~--~~gK~l~gG-~P-~sav~~~~-~i~~~~~~--~~~~~T~~gnpl~~aaa~a~L~~l~--~~~l~ 298 (392)
.+.+.-...=.||+ -..|-|+|- =- .|+|++++ ++.+.+.. ...|.+ .+|..|.-.+.-|+-+. =+.-.
T Consensus 187 P~~~~Pl~~GaDivihS~TKyl~GHsDvl~G~vv~~~~~~~~~l~~~~~~~G~~--~sP~da~L~lRGLkTL~lRm~r~~ 264 (405)
T PRK08776 187 PALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAALHQQLVWWANALGLT--GSPFDAFLTLRGLRTLDARLRVHQ 264 (405)
T ss_pred CCCCCHHHHCCCEEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC--CCCHHHHHHHCCCCCHHHHHHHHH
T ss_conf 002682652797899972604327865305622268889999999999860888--883357888645788999999999
Q ss_pred CHHHHHCCHHHHHHHHHHHHCCCEEEE------------------ECCCEEEEEEEECCCHH
Q ss_conf 011210000268899998867970755------------------04640099987249989
Q gi|254780432|r 299 ENVINIAKILFEGLTAIKNRFPNMFLE------------------VRGQGLLIGLKTVFSPA 342 (392)
Q Consensus 299 ~~~~~~g~~l~~~L~~l~~~~~~~v~~------------------vRG~Gl~~~ie~~~~~~ 342 (392)
+|+.++ .++.++||. |.. -+|.|-|++|++.....
T Consensus 265 ~nA~~l--------A~~L~~hp~-V~~V~YPgL~shp~h~la~r~~~G~Ggm~Sf~l~~~~~ 317 (405)
T PRK08776 265 ENADAI--------AALLDGHAA-VNQVYFPGLASHPGHALAARQQKGFGAMLSFELEGGEA 317 (405)
T ss_pred HHHHHH--------HHHHHHCCC-CCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCHHH
T ss_conf 999999--------999970989-68688988889816789986489986526888457399
No 247
>pfam01212 Beta_elim_lyase Beta-eliminating lyase.
Probab=99.03 E-value=4.2e-10 Score=86.49 Aligned_cols=238 Identities=20% Similarity=0.205 Sum_probs=135.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 7899999999999973145068757-818999998652010133312356555403567776654320013478600234
Q gi|254780432|r 48 HSHPELVAILKSQSEKLWHVSNLYQ-STQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVT 126 (392)
Q Consensus 48 h~~p~i~~a~~~q~~~~~~~~~~~~-~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~ 126 (392)
-.+|++.+||.+... . ...|. .+...+|.+++.+.++.+.++|+.|||-||-.|++.-- +++.. ||+
T Consensus 9 ~~t~~m~~a~~~a~~--G--dd~Yg~D~t~~~le~~~a~l~G~eaalfv~sGT~AN~ial~~~~-------~~g~~-vi~ 76 (288)
T pfam01212 9 GPTPAMREAMAAAMV--G--DEVYGGDPTVNRLEDRVAELFGKEAALFVPSGTMANQLALMAHC-------RRGDE-VIC 76 (288)
T ss_pred CCCHHHHHHHHHCCC--C--CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHC-------CCCCE-EEE
T ss_conf 899999999982335--7--73226798999999999998699829986886799999999838-------89988-998
Q ss_pred CCCC-CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC-------CCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 3546-565432123-4553211347999864333222100268875410-------123322223332222112462101
Q gi|254780432|r 127 FEGA-FHGRTLATI-SAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQI-------SNDTAAILIEPIQGEGGVRKVPEE 197 (392)
Q Consensus 127 ~~~~-yHG~t~~a~-s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~-------~~~iAavi~Epv~g~~G~~~~~~~ 197 (392)
-+.+ .|-...++. .++|-... |.... ..-.-|++.+++.+ ..++..|.+|--...+|-.++|.+
T Consensus 77 ~~~sHi~~~E~ga~~~~~G~~~~-----~l~~~--~~G~~~~~~l~~~i~~~~~~h~~~~~~v~le~t~n~~gG~~~~~~ 149 (288)
T pfam01212 77 GEPAHIYFDETGGHAELGGAQPV-----PLPGA--EAGKLDLEDLEAAIRPVGDIHFPPTGLISLENTHNSAGGQVVSLE 149 (288)
T ss_pred ECCCCCEEECCCHHHHHCCCEEE-----ECCCC--CCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEECCHH
T ss_conf 35767654567779998298258-----44787--789829999999876449854676547999955448896655789
Q ss_pred HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC-------CCCEE--ECCCCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 232211022345721310110034444555310111245-------45302--10344444434432100-011122222
Q gi|254780432|r 198 FLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV-------KPDIM--TIAKGMGGGFPIGACLA-TNEVAACMN 267 (392)
Q Consensus 198 ~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi-------~PDi~--~~gK~l~gG~P~sav~~-~~~i~~~~~ 267 (392)
++++++++|++||+.+.+|=- |. |-+.-..++ --|.+ |++|+++ .|+++++. +++..+...
T Consensus 150 el~~i~~~a~~~gl~lHmDGA-----Rl--~nA~~a~~~~~~e~~~~~D~v~~~~sK~lg--a~~Gavl~g~~~~i~~a~ 220 (288)
T pfam01212 150 ELREIRAIAREHGIPLHLDGA-----RL--ANAAVALGVIVKEITSYADSVSMSLSKGLG--APVGSVLAGSDDFIAYAI 220 (288)
T ss_pred HHHHHHHHHHHCCCEEEEHHH-----HH--HHHHHHCCCCHHHHHCCCCEEEEEEECCCC--CCEEEEEEECHHHHHHHH
T ss_conf 999999999980993763087-----89--888876099988985468889998435788--610038982899999999
Q ss_pred C--CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHH
Q ss_conf 3--32234532111100123345543201222101121000026889999
Q gi|254780432|r 268 Q--GSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAI 315 (392)
Q Consensus 268 ~--~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l 315 (392)
. ...|+-+.-.-+-+++++..|+... ....+..++.++|.++|+.+
T Consensus 221 ~~rk~lGg~mrq~g~~aaa~~~aL~~~~--~~l~~dh~~A~~La~~l~~~ 268 (288)
T pfam01212 221 RQRKYLGGGMRQAGVLAAAGLRALEEGV--ARLGRDHATARRLAEGLELL 268 (288)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHC
T ss_conf 9999972642566799999999998089--88888899999999999768
No 248
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.03 E-value=4.7e-09 Score=79.63 Aligned_cols=283 Identities=15% Similarity=0.173 Sum_probs=166.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 50687578189999986520101333123565554035677766543200134786002343546565432123455321
Q gi|254780432|r 66 HVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL 145 (392)
Q Consensus 66 ~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~ 145 (392)
+.-.++.||....|+++|++.-+.+.++.++||--|+.+++- +.. ++| ..||+-+..|.| |..-+.
T Consensus 53 y~Y~R~~nPT~~~le~~la~LEgg~~a~~~sSGmaAi~~~ll-~~l------~~G-d~vv~~~~~Yg~-T~~l~~----- 118 (386)
T PRK06767 53 YIYSRLGNPTVKLFEERMAVLEGGEEALAFGSGMAAISATLI-GFL------KAG-DHIICSNGLYGC-TYGFLE----- 118 (386)
T ss_pred CEECCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-HCC------CCC-CEEEECCCCCCC-HHHHHH-----
T ss_conf 503389886799999999998499716885278999999997-307------999-989983798223-466999-----
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 13479998643332221002688754101233222233322221124621012322110223457213101100344445
Q gi|254780432|r 146 QYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRT 225 (392)
Q Consensus 146 ~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRt 225 (392)
.....++. .+..++..|.+.+++.+.++.-.|++|..-.-- ...++ ++++.++|+++|+++|+|-+.+
T Consensus 119 ~~~~~~gI---~~~~~d~~~~~~~~~~i~~~Tklv~~EspsNP~-l~v~D---i~~i~~~A~~~g~~~vvDNT~a----- 186 (386)
T PRK06767 119 VLEEKFMI---THSFCDMETEADIENKIRPNTKLIFVETPINPT-MKLID---LKQVIRVAKRNGLLVIVDNTFC----- 186 (386)
T ss_pred HHHHHCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCEEEEECCCC-----
T ss_conf 98887375---899968988899997568882599997799987-67127---9999998600673499745764-----
Q ss_pred CCCCCCCCCCCCCCEE--ECCCCCCC-C-CCCCCCCCCCCCC-CCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHC--CC
Q ss_conf 5531011124545302--10344444-4-3443210001112-222233--2234532111100123345543201--22
Q gi|254780432|r 226 GKLFAYEWANVKPDIM--TIAKGMGG-G-FPIGACLATNEVA-ACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQS--DG 296 (392)
Q Consensus 226 G~~f~~e~~gi~PDi~--~~gK~l~g-G-~P~sav~~~~~i~-~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~--~~ 296 (392)
..+.++-...-.||+ -..|-|+| | .-.|+++++++.+ +.+... ..|.+. +|..|...+..|+-+.- +.
T Consensus 187 -tP~~~~Pl~~GaDivihS~TKYi~GHsD~l~G~vv~~~~~~~~~~~~~~~~~G~~~--sp~~a~l~~rGl~TL~lRm~~ 263 (386)
T PRK06767 187 -SPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIM--APFDAWLLLRGLKTLAVRMDR 263 (386)
T ss_pred -CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCC--CCHHHHHHHCCCCCHHHHHHH
T ss_conf -22001544367978997146400477660313886167999999999998417878--934778986267878999999
Q ss_pred CCCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------CCCEEEEEEEECCCHHHHHHHHHHCCEEEE---ECC--
Q ss_conf 210112100002688999988679707550------------464009998724998999999996898996---268--
Q gi|254780432|r 297 FLENVINIAKILFEGLTAIKNRFPNMFLEV------------RGQGLLIGLKTVFSPALLAAKFRDECLLTA---PSS-- 359 (392)
Q Consensus 297 l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------RG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~---~~~-- 359 (392)
-.+|+.+ +.++.++||. |..| ++-|-|++|++....+...+.+-.--++.. -.+
T Consensus 264 ~~~nA~~--------lA~~L~~hp~-V~~V~yP~~~la~k~~~~~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~SlGg~e 334 (386)
T PRK06767 264 HCDNAEK--------IVSFLKNHDA-VEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTE 334 (386)
T ss_pred HHHHHHH--------HHHHHHCCCC-CCEEECCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 9999999--------9999963998-375879688899887213894689999388999999998388752420567763
Q ss_pred -------------------------CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -------------------------9889955898688999999999999999985
Q gi|254780432|r 360 -------------------------DNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 360 -------------------------~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
++.||++ +--|+.+++++-|+++|++|
T Consensus 335 SLi~~p~~~~h~~~~~e~r~~~Gi~~~lvRlS----vGlEd~~DLi~Dl~qAL~~l 386 (386)
T PRK06767 335 TLIQHPATMTHAAIPAELRQEMGIYDNLIRLS----VGLESWEDIVSDLEQALKKI 386 (386)
T ss_pred CEEECCCCCCCCCCCHHHHHHCCCCCCEEEEE----EEECCHHHHHHHHHHHHHCC
T ss_conf 02357642356458999998669792979999----41099999999999998419
No 249
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.02 E-value=5.8e-10 Score=85.61 Aligned_cols=280 Identities=15% Similarity=0.188 Sum_probs=163.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4506875781899999865201013331235655540356777-665432001347860023435465654321234553
Q gi|254780432|r 65 WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIK-TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGG 143 (392)
Q Consensus 65 ~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aik-lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~ 143 (392)
.+.-.+..||....|+++|.+.-+.+.++.+.||--|+.+++- ++ ++| ..||+-++.|-|... -+ .
T Consensus 52 g~~YsR~~nPT~~~lE~~la~LEg~~~a~~~sSGmaAi~~~ll~~l--------~~G-d~iv~~~~~Yggt~~-l~---~ 118 (391)
T PRK08133 52 GNTYSRFTNPTVRMFQERLAALEGAEACVATASGMAAILSVVMALL--------QAG-DHVVSSRSLFGSTLS-LF---E 118 (391)
T ss_pred CCEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHC--------CCC-CEEEECCCCCCCHHH-HH---H
T ss_conf 9543489886699999999998099759996588999999999845--------799-989967897453899-99---9
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC
Q ss_conf 21134799986433322210026887541012332222333222211246210123221102234572131011003444
Q gi|254780432|r 144 KLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG 223 (392)
Q Consensus 144 ~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 223 (392)
.....++- .+..++..|.+.+++.+.++...|++|..-.--.- .++ ++++.++|+++|+++|+|-..+
T Consensus 119 --~~l~~~Gi---~~~~vd~~d~~~~~~ai~~~T~lv~~EtpsNP~l~-v~D---i~~i~~iA~~~g~~~vVDNT~a--- 186 (391)
T PRK08133 119 --KIFARFGI---ETTFVDLTDLDAWRAAVRPNTKLFFLETPSNPLTE-LAD---IAALAEIAHAAGALLVVDNCFC--- 186 (391)
T ss_pred --HHHHCCCE---EEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCE-EEC---CHHHHHHHHHCCCEEEEECCCC---
T ss_conf --87410784---44467987999999745878459999789999866-555---3999999875587599878976---
Q ss_pred CCCCCCCCCCCCCCCCEEE--CCCCCCC-C-CCCCCCCCCCCC-CCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHH--C
Q ss_conf 4555310111245453021--0344444-4-344321000111-2222233--223453211110012334554320--1
Q gi|254780432|r 224 RTGKLFAYEWANVKPDIMT--IAKGMGG-G-FPIGACLATNEV-AACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQ--S 294 (392)
Q Consensus 224 RtG~~f~~e~~gi~PDi~~--~gK~l~g-G-~P~sav~~~~~i-~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~--~ 294 (392)
..+.++-+..=.||++ ..|-|+| | .=.|+|+++++. .+.+... ..|.+. +|..|.-.+..|+-+. =
T Consensus 187 ---tP~~~~Pl~~GaDivvhS~TKyi~GHsD~lgG~v~~~~~~~~~~~~~~~~~~G~~l--sP~~a~l~lrGL~TL~lRm 261 (391)
T PRK08133 187 ---TPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKEFIMEEVFGFLRTAGPTL--SPFNAWVFLKGLETLSLRM 261 (391)
T ss_pred ---CCCCCCHHHHCCCEEEEECCCEECCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCC--CCHHHHHHHCCCCCHHHHH
T ss_conf ---52444656618837999666030488874448996367999999999999748888--9327789860477699999
Q ss_pred CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEE------------------ECCCEEEEEEEECCCHHHHHHHHHHC-CEE-
Q ss_conf 2221011210000268899998867970755------------------04640099987249989999999968-989-
Q gi|254780432|r 295 DGFLENVINIAKILFEGLTAIKNRFPNMFLE------------------VRGQGLLIGLKTVFSPALLAAKFRDE-CLL- 354 (392)
Q Consensus 295 ~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~------------------vRG~Gl~~~ie~~~~~~~~~~~l~~~-Gll- 354 (392)
+.-.+|+.++. ++.++||. |.. -+|-|-|++|++........ ++.++ -++
T Consensus 262 ~r~~~nA~~lA--------~~L~~hp~-V~~V~yPgL~shp~h~la~r~~~g~Gg~~sf~l~g~~~~~~-~f~~~l~l~~ 331 (391)
T PRK08133 262 EAHSANALELA--------EWLEAHPG-VERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAW-RVIDATRLIS 331 (391)
T ss_pred HHHHHHHHHHH--------HHHHCCCC-CCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHH-HHHHHCCCCE
T ss_conf 99999999999--------99970999-14798999989977789997089997258999719999999-9998288465
Q ss_pred ------------EEE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf ------------962-----------------6898899558986889999999999999999
Q gi|254780432|r 355 ------------TAP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 355 ------------~~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
..| ..++.||++. --|+++++++-|+++|.
T Consensus 332 ~a~SlGg~eSLi~~Pa~~th~~~~~e~r~~~GI~~~liRlSV----GlEd~~DLi~Dl~qAL~ 390 (391)
T PRK08133 332 ITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAV----GLEDVADLKADLARGLA 390 (391)
T ss_pred EECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE----EECCHHHHHHHHHHHHC
T ss_conf 613527730122675113454389999986698949599996----10999999999999867
No 250
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.01 E-value=1.4e-08 Score=76.62 Aligned_cols=281 Identities=15% Similarity=0.109 Sum_probs=164.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 50687578189999986520101333123565554035677-76654320013478600234354656543212345532
Q gi|254780432|r 66 HVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAI-KTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 66 ~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Ai-klar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
+.-.++.||....|+++|...-+.+.+..+.||--|+-+++ -+++ +|- .||+-+..|.|.... +
T Consensus 57 ~~Y~R~~nPT~~~lE~~la~LEg~~~a~~~sSGmaAi~~~ll~ll~--------~Gd-~vv~~~~~Yg~T~~~-~----- 121 (394)
T PRK07050 57 WRYGLHATPTSLALAQRLAEIEGGRHALLQPSGLAAISNVYFGLVK--------AGD-DVLIPDNVYGPNRDF-G----- 121 (394)
T ss_pred CEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCC--------CCC-EEEECCCCCHHHHHH-H-----
T ss_conf 6255888865999999999982997499965789999999999607--------998-578356663338999-9-----
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 11347999864333222100268875410123322223332222112462101232211022345721310110034444
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
......++- .+..++..|.+.+++.+.++.-.|++|..-.-. ...++ ++++.++|+++|+++|+|-+...
T Consensus 122 ~~~l~~~Gi---~v~f~d~~d~~~~~~~i~~~Tkli~~Esp~NP~-l~v~D---i~~ia~~A~~~g~~~vVDNT~at--- 191 (394)
T PRK07050 122 EWLAKDFGI---TVRFYDPMIGAGIADLIQPNTRLIWLEAPGSVT-MEVPD---VPAITAAARARGVVTAIDNTWSA--- 191 (394)
T ss_pred HHHHHCCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CEECC---HHHHHHHHHHCCCEEEEECCCCC---
T ss_conf 987531887---999979999899984368664499984489876-25437---29999999875986998578668---
Q ss_pred CCCCCCCCCCCCCCCEEE--CCCCCCCC-CC-CCCCCC-CCCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHH--CC
Q ss_conf 555310111245453021--03444444-34-432100-01112222233--223453211110012334554320--12
Q gi|254780432|r 225 TGKLFAYEWANVKPDIMT--IAKGMGGG-FP-IGACLA-TNEVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQ--SD 295 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~~--~gK~l~gG-~P-~sav~~-~~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~--~~ 295 (392)
.+.++-...=.||++ ..|-|+|- =- .|+|++ ++++.+.+... ..|.+. +|..|.-.+..|+-+. =+
T Consensus 192 ---P~~~~Pl~~GaDiVihS~TKyi~GHsDvl~G~vv~~~~~~~~~l~~~~~~~G~~~--sp~~a~l~~rGL~TL~lRm~ 266 (394)
T PRK07050 192 ---GLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGV--SADDCSLVLRGLPSMQVRFD 266 (394)
T ss_pred ---CCCCCCCCCCCCEEEEECCEEECCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCC--CHHHHHHHHCCCCCHHHHHH
T ss_conf ---6500631046989995066344378887677365699999999999998626778--98999999748984788899
Q ss_pred CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCC-HHHHHHHHHHCC-EE-
Q ss_conf 2210112100002688999988679707550------------------46400999872499-899999999689-89-
Q gi|254780432|r 296 GFLENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFS-PALLAAKFRDEC-LL- 354 (392)
Q Consensus 296 ~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~-~~~~~~~l~~~G-ll- 354 (392)
.-.+|+.++. ++.+.||. |..| +|.|-|+++++... ......++.++- ++
T Consensus 267 r~~~nA~~lA--------~~L~~hp~-V~~V~yPgL~s~p~h~~a~~~~~g~gg~~s~~~~~~~~~~~~~~f~~~l~l~~ 337 (394)
T PRK07050 267 AHSRSALELA--------QWLKARPE-IATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYDAAQVDAFVEALELFA 337 (394)
T ss_pred HHHHHHHHHH--------HHHHHCCC-EEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCE
T ss_conf 9999999999--------99861898-10898999889815999997579996289999756679999999998388265
Q ss_pred -----------EE------------ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -----------96------------268988995589868899999999999999998
Q gi|254780432|r 355 -----------TA------------PSSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 355 -----------~~------------~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
+. +..++.||++.- -|+++++++=|+++|..
T Consensus 338 ~a~SlGg~eSL~~p~~~~~~~~~~~~~~~~liRlSvG----lEd~~DLi~DL~qAL~a 391 (394)
T PRK07050 338 IGWSWGGACSLAMPYDVASMRTGKWPHRGTLVRFYIG----LEDEADLRADLEQALQA 391 (394)
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC----CCCHHHHHHHHHHHHHH
T ss_conf 5026457664745897655562002789986999941----19999999999999997
No 251
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.00 E-value=6.2e-09 Score=78.89 Aligned_cols=275 Identities=16% Similarity=0.219 Sum_probs=156.7
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6875781899999865201013331235655540356777-665432001347860023435465654321234553211
Q gi|254780432|r 68 SNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIK-TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ 146 (392)
Q Consensus 68 ~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aik-lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~ 146 (392)
-.+..||....|+++|+..-+...++.+.||--|+.+++. ++ ++|. .||+-+..|.|.....- .
T Consensus 47 YsR~gNPT~~~lE~~la~LEg~~~a~~~sSGmaAi~~~l~~ll--------~~Gd-~iv~~~~~Yggt~~l~~------~ 111 (370)
T PRK07582 47 YGRSSNPTWRQLESALGELEGGAAALVFGSGMAAITAVLRALL--------RPGD-TVVVPADGYYQVRALAR------E 111 (370)
T ss_pred EECCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHC--------CCCC-EEEECCCCCHHHHHHHH------H
T ss_conf 5389986899999999997199718986487999999999970--------8999-89977887779999999------8
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 34799986433322210026887541012332222333222211246210123221102234572131011003444455
Q gi|254780432|r 147 YLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG 226 (392)
Q Consensus 147 ~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG 226 (392)
....++-. +..+ |.....+....+.-.|++|..-.-.. ..++ ++++.++|+++|+++|+|-+..
T Consensus 112 ~l~~~Gi~---v~~~---~~~d~~~~~~~~tklv~~EspsNP~l-~v~D---i~~ia~~A~~~gi~~vVDNT~a------ 175 (370)
T PRK07582 112 YLAPLGVT---VREA---PTAGMAEAAAGAADLVLAETPSNPGL-DVVD---LARLARACHAAGALLVVDNTTA------ 175 (370)
T ss_pred HHHHCCEE---EEEC---CCHHHHHHHCCCCCEEEEECCCCCCC-EEEC---CHHHHHHHHHCCCEEEEECCCC------
T ss_conf 87506816---8953---85517877225773899977999886-5335---3888999987699699988984------
Q ss_pred CCCCCCCCCCCCCEE--ECCCCCCC-CCCC-CCCCCCC-CCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHH--CCCC
Q ss_conf 531011124545302--10344444-4344-3210001-1122222332--23453211110012334554320--1222
Q gi|254780432|r 227 KLFAYEWANVKPDIM--TIAKGMGG-GFPI-GACLATN-EVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQ--SDGF 297 (392)
Q Consensus 227 ~~f~~e~~gi~PDi~--~~gK~l~g-G~P~-sav~~~~-~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~--~~~l 297 (392)
..+.+.-...=.||+ -..|-|+| |=-+ |+|++++ ++.+.+.... .|.+ .+|..|...+..|+-+. =+.-
T Consensus 176 tP~~~~Pl~~GADivvhS~TKYl~Ghsd~lgG~v~~~~~~~~~~~~~~~~~~G~~--~sP~~a~lllrGl~TL~lRm~r~ 253 (370)
T PRK07582 176 TPLGQRPLELGADLVVASDTKALSGHSDLLAGYVAGRDPELMAAVERWRLLAGAI--PGPFEAWLAHRSLATLGLRFERQ 253 (370)
T ss_pred CHHHCCCHHCCCCEEEEEECEEECCCCCCCCEEEECCCHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHCCCHHHHHHHH
T ss_conf 0642480021898698850435247887403287258888999999999852887--88788999986108688999999
Q ss_pred CCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHCC-EE----
Q ss_conf 10112100002688999988679707550------------------46400999872499899999999689-89----
Q gi|254780432|r 298 LENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDEC-LL---- 354 (392)
Q Consensus 298 ~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~G-ll---- 354 (392)
.+|+.++. ++.++||. |..| +|.|-|++|++. ..+. ..++.++- ++
T Consensus 254 ~~nA~~lA--------~~L~~hp~-V~~V~yPgL~s~p~h~la~k~~~g~Gg~~sf~l~-~~~~-~~~f~~~l~l~~~a~ 322 (370)
T PRK07582 254 CQNALAVA--------ELLREHPA-VRGLRYPGLPEDPAHAVARAQMRRFGGLVSFELA-DAEA-VEAFVDRSRLLVAAT 322 (370)
T ss_pred HHHHHHHH--------HHHHCCCC-CCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEC-CHHH-HHHHHHHCCCCEECC
T ss_conf 87899999--------99970999-6778898999981399999868998738999979-9999-999998179472453
Q ss_pred ---------------EEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ---------------962689889955898688999999999999999985
Q gi|254780432|r 355 ---------------TAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 355 ---------------~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
..+..++.|||+. --|+++++++-|+++|.+|
T Consensus 323 SlGg~~s~~~~~~~~~~~i~~~liRlSV----GlEd~~DLi~Dl~qAL~~l 369 (370)
T PRK07582 323 SFGGVHTSADRRARWGDAVPPGFVRLSC----GIEDTDDLVADVEQALDAL 369 (370)
T ss_pred CCCCCCCCCCHHHHHCCCCCCCEEEEEE----ECCCHHHHHHHHHHHHHHC
T ss_conf 6334667847998803997939299994----0099999999999999856
No 252
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.00 E-value=2.1e-08 Score=75.34 Aligned_cols=286 Identities=17% Similarity=0.231 Sum_probs=161.8
Q ss_pred CCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101--3331235655540356777665432001347860023435465654321234553211
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ 146 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~ 146 (392)
+.|..+...+|-+.|.+..+ .+.+..+|+.+|..+..++.- ..+|+..|+....+|-=-...+ .+.|-..
T Consensus 52 nrYPD~~~~~Lr~alA~~~gv~~e~I~vGnGSdElI~~l~raf-------~~pg~d~vl~~~PtF~~Y~~~a-~~~g~~~ 123 (355)
T PRK01688 52 NRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAF-------CEPGKDAILYCPPTYGMYSVSA-ETIGVEC 123 (355)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH-------HCCCCCEEEECCCCHHHHHHHH-HHCCCEE
T ss_conf 2497998899999999986858778998168999999999998-------5589974997788768999999-8679579
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 34799986433322210026887541012332222333222211246210123221102234572131011003444455
Q gi|254780432|r 147 YLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG 226 (392)
Q Consensus 147 ~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG 226 (392)
.. -|..+++ ..|++++.+.+.+.-..+|.-|=.=. |.. .+.+-+..+.+.+.. ++++|+||-..-|..-.
T Consensus 124 ~~---vpl~~~f----~~d~~~~~~~~~~~klvficNPNNPT-G~~-~~~~~l~~l~~~~~~-~~lvVvDEAY~eF~~~~ 193 (355)
T PRK01688 124 RT---VPTLENW----QLDLPAISDNLDGVKVVYVCSPNNPT-GNL-INPQDLRTLLELTRG-KAIVVADEAYIEFCPQA 193 (355)
T ss_pred EE---ECCCCCC----CCCHHHHHHHCCCCCEEEECCCCCCC-CCC-CCHHHHHHHHHHCCC-CCEEEEECHHHHCCCCH
T ss_conf 99---5276576----86999999751588889986899987-764-689999999975888-86688554164347640
Q ss_pred CCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 531011124545302---1034444-443443210001112222233223453211110012334554320122210112
Q gi|254780432|r 227 KLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVI 302 (392)
Q Consensus 227 ~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~ 302 (392)
.+ .+...--|.++ +|+|..| .|+-+|..++++++++.+.... ..|.-|.++..+|.++|+-=.-+.+.++++
T Consensus 194 s~--~~l~~~~~NliVlRTfSK~~gLAGlRlGy~ia~~~ii~~l~k~~--~p~~vn~~~~~~a~~al~~~~~~~~~~~~~ 269 (355)
T PRK01688 194 SL--AGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVI--APYPLSTPVADIAAQALSPQGIAAMRERVA 269 (355)
T ss_pred HH--HHHHHCCCEEEEEEEHHHHHCCCCCCEEEEECCHHHHHHHHHHH--CCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 04--56764077289995166875268731278850999999999850--789753999999999972045999999999
Q ss_pred HH---CCHHHHHHHHHHHHCCCEEEEE-CCCEEEEEEEECCCHHHHHHHHHHCCEEEEECC-----CCEEEECCCCCCCH
Q ss_conf 10---0002688999988679707550-464009998724998999999996898996268-----98899558986889
Q gi|254780432|r 303 NI---AKILFEGLTAIKNRFPNMFLEV-RGQGLLIGLKTVFSPALLAAKFRDECLLTAPSS-----DNVVRILPPLTITA 373 (392)
Q Consensus 303 ~~---g~~l~~~L~~l~~~~~~~v~~v-RG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~-----~~~irl~Ppl~it~ 373 (392)
.+ -+++.+.|++ .+. +..| ...+=++-+++ .+...+.+.|+++|++++... ++.+|++ +=|+
T Consensus 270 ~i~~~R~~l~~~L~~----l~~-~~~v~pS~aNFil~~~-~~~~~~~~~L~~~GIlVR~~~~~~gl~~~lRIt---igt~ 340 (355)
T PRK01688 270 QINANRQWLIAALKE----IPC-VEQVFDSETNYILARF-TASSAVFKSLWDQGIILRDQNKQPGLSNCLRIT---IGTR 340 (355)
T ss_pred HHHHHHHHHHHHHHH----CCC-CCEECCCCCCEEEEEC-CCHHHHHHHHHHCCEEEEECCCCCCCCCEEEEE---CCCH
T ss_conf 999999999999985----899-8616899887899977-999999999997990995589878999989997---6999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780432|r 374 EEIHEGLERIER 385 (392)
Q Consensus 374 ~eid~~i~~l~~ 385 (392)
+|.++++++|..
T Consensus 341 een~~ll~aLka 352 (355)
T PRK01688 341 EECQRVIDALRA 352 (355)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999736
No 253
>PRK05968 hypothetical protein; Provisional
Probab=99.00 E-value=6.1e-09 Score=78.93 Aligned_cols=282 Identities=14% Similarity=0.104 Sum_probs=165.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45068757818999998652010133312356555403567776654320013478600234354656543212345532
Q gi|254780432|r 65 WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 65 ~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
.+.-.+..||....|+++|+..-+...++.+.||--|+.+++- +.. ++|.. ||+-+..|.|.....-
T Consensus 54 g~~YsR~~NPT~~~lE~~la~LEgg~~a~~~sSGmaAis~~l~-~ll------~~Gd~-iv~~~~~YggT~~l~~----- 120 (389)
T PRK05968 54 RPIYTRGDNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVL-SFV------EPGDR-IVAVRHVYPDAYRLFG----- 120 (389)
T ss_pred CCEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-HHH------CCCCE-EEECCCCCCCHHHHHH-----
T ss_conf 9614289886699999999998299638885488999999999-960------89998-9858876675899999-----
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 11347999864333222100268875410123322223332222112462101232211022345721310110034444
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
.....++- .+..++..|.+.+++.++ +.-.|++|+.-.-. ...++ ++++.++|+++|+++|+|-+..
T Consensus 121 -~~l~~~GI---~v~~vd~~d~~~~~~~i~-~Tklv~~EtpsNP~-l~v~D---I~~ia~iA~~~g~~~vVDNTfa---- 187 (389)
T PRK05968 121 -TLLKRMGV---EVDYVDGRDEEAVAKALP-GAKLLYLESPTSWV-FELQD---IAALAALAKRHGVVTVIDNSWA---- 187 (389)
T ss_pred -HHHHCCCC---EEEEECCCCHHHHHHCCC-CCCEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCEEEEECCCC----
T ss_conf -88860784---699968999999996276-87289997899988-72738---9999999998399599977861----
Q ss_pred CCCCCCCCCCCCCCCEEE--CCCCCCC-C-CCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCHHHHHHHHHHHH--CC
Q ss_conf 555310111245453021--0344444-4-34432100011122222332---23453211110012334554320--12
Q gi|254780432|r 225 TGKLFAYEWANVKPDIMT--IAKGMGG-G-FPIGACLATNEVAACMNQGS---HGSTYGGNVLAMVLGEKVLNIIQ--SD 295 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~~--~gK~l~g-G-~P~sav~~~~~i~~~~~~~~---~~~T~~gnpl~~aaa~a~L~~l~--~~ 295 (392)
..+.++-...=.||++ ..|-|+| | .=.|+|+++++.+....... .|.+. +|..|.-.+..|+-+. =+
T Consensus 188 --tP~~~~Pl~~GaDivvhS~TKyi~GHsDvl~G~v~~~~~~~~~~~~~~~~~lG~~l--sP~~a~l~lRGL~TL~lRm~ 263 (389)
T PRK05968 188 --SPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGGKL--SPFEAWLLLRGLRTLPLRMK 263 (389)
T ss_pred --HHHHCCHHHHCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCC--CHHHHHHHHCCCCCHHHHHH
T ss_conf --16425842407987997045344689884426994569999999999998627778--85888999847986999999
Q ss_pred CCCCHHHHHCCHHHHHHHHHHHHCCCEEEE-------------ECCCEEEEEEEECCCHHHHHHHHHHCC-EEEE-----
Q ss_conf 221011210000268899998867970755-------------046400999872499899999999689-8996-----
Q gi|254780432|r 296 GFLENVINIAKILFEGLTAIKNRFPNMFLE-------------VRGQGLLIGLKTVFSPALLAAKFRDEC-LLTA----- 356 (392)
Q Consensus 296 ~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~-------------vRG~Gl~~~ie~~~~~~~~~~~l~~~G-ll~~----- 356 (392)
.-.+|+.++.+.| ++||. |.. ..|.|-|++|++.... . .+++.+.- ++..
T Consensus 264 rh~~nA~~vA~~L--------~~hp~-V~~V~yPgL~shp~~~l~g~gg~~sf~l~~~~-~-~~~f~~~L~lf~~a~SlG 332 (389)
T PRK05968 264 AHEASALLIARRL--------KAHPV-VETVCHPALANHPPAGLSGTSGLFSFIFREGV-D-VRRFADALKLFRLGVSWG 332 (389)
T ss_pred HHHHHHHHHHHHH--------HHCCC-CCEEECCCCCCCHHHHCCCCCEEEEEEECCHH-H-HHHHHHHCCCCEEECCCC
T ss_conf 9999999999999--------61999-86633888522313421786437999957779-9-999998488075631668
Q ss_pred -------------------------ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -------------------------26898899558986889999999999999999852
Q gi|254780432|r 357 -------------------------PSSDNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 357 -------------------------~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
+..++.||++ +--|+.+++++-|+++|.+-+
T Consensus 333 g~eSLi~~~~~~~~~~~~~~~~~~~Gi~~~liRlS----VGlEd~eDLi~Dl~qAL~~a~ 388 (389)
T PRK05968 333 GHESLVVPAEVVLQQKAQPNSAARFGISPRSVRLH----VGLEGTEALWADLEQALAAAS 388 (389)
T ss_pred CCCCCCCCCHHHCCCCCCHHHHHHCCCCCCEEEEE----EEECCHHHHHHHHHHHHHHHC
T ss_conf 64302187066416779988998659694969999----310999999999999999843
No 254
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=98.99 E-value=7.8e-08 Score=71.66 Aligned_cols=312 Identities=20% Similarity=0.213 Sum_probs=166.9
Q ss_pred HHCCCCCCHHHHHHHHHHHHHC-CCCCC-CCCCHH-------HHHHHHHHHHHCCCCCCC--CCCCCCCCHHHHHHHHHH
Q ss_conf 4357878999999999999731-45068-757818-------999998652010133312--356555403567776654
Q gi|254780432|r 43 VNSLGHSHPELVAILKSQSEKL-WHVSN-LYQSTQ-------QEIFANHLIHSTFADRVF--FTNSGAESVECAIKTARR 111 (392)
Q Consensus 43 ~~~lGh~~p~i~~a~~~q~~~~-~~~~~-~~~~~~-------~~~la~~L~~~~~~~~v~--f~~SGseA~e~Aiklar~ 111 (392)
.-...|-+|.+++.+.+ +. +++.. -|+.+. .-+|-..|++.+++|-+- ... |+-|.--|+.+|++
T Consensus 75 ~G~y~~~~P~~v~~i~~---r~ef~TaytPYQpE~sQG~Lq~l~e~Q~~l~eLtGmd~~nasl~d-ga~a~~ea~~ma~r 150 (449)
T PRK00451 75 AGAYDHYIPAAVDHIIS---RSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYD-GATALAEAALMAVR 150 (449)
T ss_pred CCCCCCCCHHHHHHHHH---CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC-HHHHHHHHHHHHHH
T ss_conf 03157868699999873---865211468998311139999999999999998598746778774-77899999999986
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 32001347860023435465654321234553211347999864333222100268875410123322223332222112
Q gi|254780432|r 112 YHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGV 191 (392)
Q Consensus 112 ~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~ 191 (392)
+ ++|++|+. ..+-|..+...+.. -....++.-..-.....-.-|+++|++.+.+++||+++.--.. -|.
T Consensus 151 ~------~~r~~vlv-~~s~hP~~~~v~~t---~a~~~g~~vv~v~~~~~g~~Dl~~L~~~~~~~~A~vmi~~Pnt-~G~ 219 (449)
T PRK00451 151 I------TGRNKVLV-SGAVHPEYREVLKT---YLKGQGIEVVEVPYPEDGVTDLEALEAAVDDDTAAVVVQYPNF-FGV 219 (449)
T ss_pred H------CCCCEEEE-CCCCCCCHHHHHHH---HCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEECCCC-CCC
T ss_conf 4------26873997-79878427999986---3015784279845775666688999864178758999855887-775
Q ss_pred CCCCHHHHHHHHCCCCCCCCEEEE--CCC-CCCCCCCCCCCCCCCCCCCCCEE-----ECCCCCCCCCC-CCCCCCCCCC
Q ss_conf 462101232211022345721310--110-03444455531011124545302-----10344444434-4321000111
Q gi|254780432|r 192 RKVPEEFLQQLRKICDDIDALLIF--DEV-QTGYGRTGKLFAYEWANVKPDIM-----TIAKGMGGGFP-IGACLATNEV 262 (392)
Q Consensus 192 ~~~~~~~l~~l~~lc~~~g~llI~--DEV-~tG~GRtG~~f~~e~~gi~PDi~-----~~gK~l~gG~P-~sav~~~~~i 262 (392)
+. + ++.+.+++++.|.++|+ |=+ ..++-+-|.| | .||+ .+|=.++-|=| .+.+.+++++
T Consensus 220 ~e---d-i~~i~~~vh~~g~l~~~~~n~~aLg~l~~PGe~------G--aDIvvg~~q~lg~p~~fGGP~~G~~a~~~~l 287 (449)
T PRK00451 220 IE---D-LEEIAEIAHAGGALFIVVVDPVSLGLLKPPGEY------G--ADIVVGEGQPLGIPLSFGGPYLGFFATRKKL 287 (449)
T ss_pred CC---C-HHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCC------C--CCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 31---6-999999998659749997167886076784434------5--4068624766677866789987870556500
Q ss_pred CCCCCCCC-------------CCCCC----------------CCCCCCH-HHHHHHHHHHHCCCC---CCHHHHHCCHHH
Q ss_conf 22222332-------------23453----------------2111100-123345543201222---101121000026
Q gi|254780432|r 263 AACMNQGS-------------HGSTY----------------GGNVLAM-VLGEKVLNIIQSDGF---LENVINIAKILF 309 (392)
Q Consensus 263 ~~~~~~~~-------------~~~T~----------------~gnpl~~-aaa~a~L~~l~~~~l---~~~~~~~g~~l~ 309 (392)
...+ |+. +.-|. ..|..-+ .+|..-+..+=.++| -+++....+++.
T Consensus 288 ~r~l-PgriVG~t~D~~G~~~y~LtLqtREQhIrReKAtSnIctnq~l~a~~a~~Yi~~lG~~GLk~va~~a~~nAnyl~ 366 (449)
T PRK00451 288 VRQM-PGRLVGETVDVDGKRGFVLTLQAREQHIRREKATSNICTNQALCALAATIYMSLLGKEGLREVAEQNHQKAHYLA 366 (449)
T ss_pred CCCC-CCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_conf 1028-987667213678861201134553222345555466664227889999999997597669999999999999999
Q ss_pred HHHHHHHHHCCCEEEEECCCE-EEE--EEEECCCHHHHHHHHHHCCEEEE-------ECCCCEEEECCCCCCCHHHHHHH
Q ss_conf 889999886797075504640-099--98724998999999996898996-------26898899558986889999999
Q gi|254780432|r 310 EGLTAIKNRFPNMFLEVRGQG-LLI--GLKTVFSPALLAAKFRDECLLTA-------PSSDNVVRILPPLTITAEEIHEG 379 (392)
Q Consensus 310 ~~L~~l~~~~~~~v~~vRG~G-l~~--~ie~~~~~~~~~~~l~~~Gll~~-------~~~~~~irl~Ppl~it~~eid~~ 379 (392)
++|+++ +. + ++...+ .|. .+++..+...+.+++.++|+... |.-++.+-+.|.=+-|+++||++
T Consensus 367 ~~L~~~----~~-~-~~~~~~~~f~Efv~~~~~~a~~i~k~L~~~gi~~g~~lt~~~p~~~~~lmi~~TEt~sk~dlD~~ 440 (449)
T PRK00451 367 ERLAEI----GG-V-EVLFNGPFFNEFVVRLPKPAEEVNEALLEKGILGGYDLGRYYPELGNSLLVAVTELRTKEDIDAL 440 (449)
T ss_pred HHHHHC----CC-E-ECCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH
T ss_conf 998737----98-3-41689980258999789889999999997699789885442778899799970789999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999999
Q gi|254780432|r 380 LERIERTAI 388 (392)
Q Consensus 380 i~~l~~al~ 388 (392)
++++.+++.
T Consensus 441 v~al~eila 449 (449)
T PRK00451 441 VEALGEVLA 449 (449)
T ss_pred HHHHHHHHC
T ss_conf 999999869
No 255
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=98.99 E-value=8.2e-09 Score=78.06 Aligned_cols=276 Identities=14% Similarity=0.131 Sum_probs=160.1
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 68757818999998652010133312356555403567776654320013478600234354656543212345532113
Q gi|254780432|r 68 SNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQY 147 (392)
Q Consensus 68 ~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~ 147 (392)
-.++.||....|+++|+..-+.+.+..+.||--|+-+++-+. .+| ..||+-...|+|..... ..
T Consensus 48 Y~R~~nPT~~~le~~la~LE~~~~a~~~sSGmaAi~~~l~~l--------~~G-d~vv~~~~~Yg~t~~~~----~~--- 111 (364)
T PRK07269 48 YTRTKNPTRATLEETLAAIESADYALATSSGMSAIVLAFSGF--------PVG-SKVVAVRDLYGGSFRWF----NQ--- 111 (364)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHH--------CCC-CEEEECCCEECHHHHHH----HH---
T ss_conf 518988638999999999849974453276899999999983--------689-80897046073799999----98---
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 47999864333222100268875410123322223332222112462101232211022345721310110034444555
Q gi|254780432|r 148 LEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK 227 (392)
Q Consensus 148 ~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~ 227 (392)
+.+. -++.....++.+.+++.+.++.-.|++|..-.-- ...++ ++++.++|+++|+++|+|-....
T Consensus 112 ---~~~~-~~~~~~~~~~~~~~~~~i~~~Tklv~~EspsNP~-l~v~D---i~~i~~iA~~~g~~~vvDNT~at------ 177 (364)
T PRK07269 112 ---QEKE-GRFHFTYANTEEELIAAIEEDTDIVYIETPTNPL-MVEFD---IEKVAQLAHAKGAKVIVDNTFYS------ 177 (364)
T ss_pred ---HHHC-CEEEEEECCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCEEEEECCCCC------
T ss_conf ---8743-8389996898599997448785399998899977-76247---79999988756985999788643------
Q ss_pred CCCCCCCCCCCCEE--ECCCCCCCC--CCCCCCCCC-CCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHCCCCCCH
Q ss_conf 31011124545302--103444444--344321000-11122222332--234532111100123345543201222101
Q gi|254780432|r 228 LFAYEWANVKPDIM--TIAKGMGGG--FPIGACLAT-NEVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQSDGFLEN 300 (392)
Q Consensus 228 ~f~~e~~gi~PDi~--~~gK~l~gG--~P~sav~~~-~~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~ 300 (392)
.+.+.-.+.=.||+ -..|-++|- .=.|+|+++ +++.+.+.... .|.+ -+|..|.-.+..|+-+. -|
T Consensus 178 P~~~~Pl~~GaDivihS~TKYl~GHsDvl~G~vv~~~~~~~~~l~~~~~~~G~~--~sP~~a~l~~RGL~TL~-----lR 250 (364)
T PRK07269 178 PIYQRPLEDGADIVLHSATKYLSGHNDVLAGVVVTNDLELYDKLFYNLNTTGAV--LSPFDSYLLMRGLKTLS-----LR 250 (364)
T ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCC--CCHHHHHHHHCCCCCHH-----HH
T ss_conf 202673235861899835500148887401689459889999999999854887--89477788863777399-----99
Q ss_pred HHHHCCHHHHHHHHHHHHCCCEEEEEC--CCEEEEEEEECCCHHHHHHHHHHCC-EEEE---ECC---------------
Q ss_conf 121000026889999886797075504--6400999872499899999999689-8996---268---------------
Q gi|254780432|r 301 VINIAKILFEGLTAIKNRFPNMFLEVR--GQGLLIGLKTVFSPALLAAKFRDEC-LLTA---PSS--------------- 359 (392)
Q Consensus 301 ~~~~g~~l~~~L~~l~~~~~~~v~~vR--G~Gl~~~ie~~~~~~~~~~~l~~~G-ll~~---~~~--------------- 359 (392)
+++-.+- ...+.++.++||. |..|+ |.|-|++|++... .. ..++.++- ++.. -.+
T Consensus 251 ~~~~~~n-A~~lA~~L~~hp~-V~~V~yPGlgg~~sf~l~~~-~~-~~~f~~~l~lf~~a~SlGg~eSLi~~p~~~~h~~ 326 (364)
T PRK07269 251 MERSTAN-AQEVVAFLKKSPA-VKEVLYTGKGGMISFKVADE-TK-IPHILNSLKVFTFAESLGGVESLITYPTTQTHAD 326 (364)
T ss_pred HHHHHHH-HHHHHHHHHHCCC-EEEEECCCCCCEEEEEECCH-HH-HHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCC
T ss_conf 9999999-9999999975998-34997799772679996888-99-9999984863435306677561347875345633
Q ss_pred ------------CCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf ------------98899558986889999999999999999
Q gi|254780432|r 360 ------------DNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 360 ------------~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
++.|||+- --|+.+++++=|+++|.
T Consensus 327 ~~~e~r~~~Gi~~~lvRlSv----GlEd~~DLi~DL~qAL~ 363 (364)
T PRK07269 327 IPAEVRHSYGLTDDLLRLSI----GIEDARDLIADLRQALE 363 (364)
T ss_pred CCHHHHHHCCCCCCEEEEEE----CCCCHHHHHHHHHHHHC
T ss_conf 89999996597929599993----31999999999999858
No 256
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=98.99 E-value=3.8e-09 Score=80.24 Aligned_cols=289 Identities=17% Similarity=0.214 Sum_probs=151.8
Q ss_pred EEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH------HHHH-HHHHHC--CCCCCCCCCCCCCCHHH
Q ss_conf 46410226743578789999999999997314506875781899------9998-652010--13331235655540356
Q gi|254780432|r 34 FLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQE------IFAN-HLIHST--FADRVFFTNSGAESVEC 104 (392)
Q Consensus 34 yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~------~la~-~L~~~~--~~~~v~f~~SGseA~e~ 104 (392)
|+|..+. -.-+|++++++.+.+...+.-+....|.... +-++ .+.+.. ..+.+.|+.++|||+-.
T Consensus 1 YLD~aAT------tp~~~~v~~~~~~~~~~~~~Np~s~~h~~g~~a~~~le~aR~~ia~~lga~~~eiiFTsg~Tes~nl 74 (354)
T TIGR03235 1 YLDHNAT------TPVDPEVAEVMLPFLLEEFGNPGSRTHEHGHNAKKAVERARKQVAEALGAQTKEVIFTSGATESNNI 74 (354)
T ss_pred CCCCCCC------CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
T ss_conf 9888678------9899999999999998668797303128999999999999999999809996778996883799999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 77766543200134786002343546565432123455321134799986433322210026887541012332222333
Q gi|254780432|r 105 AIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEP 184 (392)
Q Consensus 105 Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Ep 184 (392)
+++-...+. ...++ .||+..-- |-..+..+. ..-+.++.-..-+++..-.-|++.+++.+.+++..|-+--
T Consensus 75 ~i~g~~~~~---~~~g~-~ii~s~~E-H~svl~~~~----~l~~~G~~v~~~~vd~~G~id~~~l~~~l~~~t~lvsi~~ 145 (354)
T TIGR03235 75 AILGLARAH---ENKGK-HIITTAIE-HPAILEPAR----ALERNGFTVTYLEVDESGRVSVEELADAIRDDTLLVSIMH 145 (354)
T ss_pred HHHHHHHHH---HCCCC-EEEECHHH-HHHHHHHHH----HHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEC
T ss_conf 999999850---26999-99981003-044799999----9996496899955578982877999987268977999988
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCCCCCCCCCCCCC
Q ss_conf 222211246210123221102234572131011003444455531011124545302103--444444344321000111
Q gi|254780432|r 185 IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA--KGMGGGFPIGACLATNEV 262 (392)
Q Consensus 185 v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g--K~l~gG~P~sav~~~~~i 262 (392)
+..+-|.+.| ++.+.++|+++|+++++|=+|+ +|+. ..+......|+++++ | ++|---+|++..+++.
T Consensus 146 ~nnetG~i~p----i~~i~~~~~~~g~~~~vDa~Q~-~g~~----~id~~~~~~D~~s~S~HK-~~GP~GiG~L~vr~~~ 215 (354)
T TIGR03235 146 VNNETGSLQP----IREIAELCEAREVFFHSDAAQV-VGKI----TVDLERDHIDLISLSGHK-AYGPKGIGALYIRKRG 215 (354)
T ss_pred CCCCCCCCCC----HHHHHHHHHCCCCEEEEECHHC-CCCC----CCCHHHHCCCEEEEECCC-CCCCCCEEEEEEECCC
T ss_conf 7566676388----9999886522564156250011-5875----557788499737631000-3488714999980466
Q ss_pred CC--CCCCCCC---------CCCCCCCCCCHHHHHHHHHHHHC--CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECC-
Q ss_conf 22--2223322---------34532111100123345543201--2221011210000268899998867970755046-
Q gi|254780432|r 263 AA--CMNQGSH---------GSTYGGNVLAMVLGEKVLNIIQS--DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRG- 328 (392)
Q Consensus 263 ~~--~~~~~~~---------~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG- 328 (392)
.+ .+.|..+ +.|- |..++++.-+++++..+ +...++.+.+-++|.+.|+ ...|++. +.|
T Consensus 216 ~~~~~l~Pl~~GGgqe~g~r~GT~--nv~~i~g~~~A~~~~~~~~~~~~~~~~~l~~~l~~~L~---~~~~~v~--i~g~ 288 (354)
T TIGR03235 216 KPKAPLAPIMFGGGQERGLRPGTL--PVPLIVGMGEAAEIARRNAQAWGVRLRAMCNLLRDALQ---TSLPGVK--LNGD 288 (354)
T ss_pred CCCCCCCCEECCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCCCEE--ECCC
T ss_conf 766664640368988687468996--59999999999999998289999999999999999997---4599659--6588
Q ss_pred ----CEEEEEEEEC-CCHHHHHHHHHHCCEEE
Q ss_conf ----4009998724-99899999999689899
Q gi|254780432|r 329 ----QGLLIGLKTV-FSPALLAAKFRDECLLT 355 (392)
Q Consensus 329 ----~Gl~~~ie~~-~~~~~~~~~l~~~Gll~ 355 (392)
..-...+-+. .++..+...| +.++-+
T Consensus 289 ~~~r~p~i~s~~~~gi~~~~l~~~L-~~~iav 319 (354)
T TIGR03235 289 PAETLPNILSFSFEGVNPEALIRNL-KADAAV 319 (354)
T ss_pred CCCCCCCEEEEEECCCCHHHHHHHH-CCCCEE
T ss_conf 2247588899997996999999986-399899
No 257
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.97 E-value=5.5e-09 Score=79.18 Aligned_cols=167 Identities=16% Similarity=0.201 Sum_probs=113.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45068757818999998652010133312356555403567776654320013478600234354656543212345532
Q gi|254780432|r 65 WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 65 ~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
.+.-.+..||....|+++|.+.-+.+.++.+.||--|+.+++- +.. ++|- .||+-+..|.|.....-
T Consensus 55 g~~YsR~gnPT~~~lE~~la~LEg~~~a~~~sSGmaAis~~ll-~ll------~~Gd-hiv~~~~~YggT~~l~~----- 121 (431)
T PRK08248 55 GNIYTRIMNPTNDVFEKRIAALEGGVGALAVSSGQAAVTYSIL-NIA------SAGD-EIVSSSSLYGGTYNLFA----- 121 (431)
T ss_pred CCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH-HHH------CCCC-EEEECCCCCCCHHHHHH-----
T ss_conf 9633189886799999999998399848995469999999999-973------7799-89972786488899987-----
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 11347999864333222100268875410123322223332222112462101232211022345721310110034444
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
.....++- .+..++..|.+.+++.+.+++-.|++|..-.-- ...++ ++++.++|+++|+++|+|-+..
T Consensus 122 -~~l~~~Gi---~v~~vD~~d~~~~~~~i~~~Tkli~~EsPsNP~-l~v~D---i~~ia~iA~~~g~~~vVDNTfa---- 189 (431)
T PRK08248 122 -HTLPKLGI---TVKFVDPSDPENFEAAITDKTKALFAETIGNPK-GDVLD---IEAVADIAHRHHIPLIVDNTFA---- 189 (431)
T ss_pred -HHHHCCCE---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCEEEEECCCC----
T ss_conf -42323887---999989977577997537774599960489998-74227---8999999977698599866753----
Q ss_pred CCCCCCCCCCCCCCCEE--ECCCCCCCC-CCCCCCCC
Q ss_conf 55531011124545302--103444444-34432100
Q gi|254780432|r 225 TGKLFAYEWANVKPDIM--TIAKGMGGG-FPIGACLA 258 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~--~~gK~l~gG-~P~sav~~ 258 (392)
..+.++-...=.||+ ...|-|+|- =-+++++.
T Consensus 190 --tP~~~~Pl~~GaDivvhS~TKYi~GHsDvlgG~vv 224 (431)
T PRK08248 190 --SPYLLRPIEFGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred --CHHHCCHHHHCCCEEEEECCEECCCCCCEEEEEEE
T ss_conf --03215834528988999665123688753547997
No 258
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=98.94 E-value=3.3e-08 Score=74.13 Aligned_cols=319 Identities=15% Similarity=0.179 Sum_probs=183.7
Q ss_pred CCCCHHHHHHHHHHHHHCCCCC------CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 8789999999999997314506------8757818999998652010133312356555403567776654320013478
Q gi|254780432|r 47 GHSHPELVAILKSQSEKLWHVS------NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTN 120 (392)
Q Consensus 47 Gh~~p~i~~a~~~q~~~~~~~~------~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~ 120 (392)
|-=.|+-.+|+.+--+..+-.- .....|+-.+|-+.|.+..++|.++++|.-++++-+.+--. ..+|
T Consensus 29 g~lt~ea~ka~~~~gdgysvcd~C~~~LD~i~~Ppi~~f~~~la~flg~D~~rlvnGar~g~qAv~~a~-------c~~G 101 (386)
T PRK09331 29 GRLTPEARKALIEYGDGYSVCDYCKGRLDKIEKPPIADFHEDLAKFLGMDEARVTPGAREGKFAVMHAL-------CKKG 101 (386)
T ss_pred CCCCHHHHHHHHHHCCCCCHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH-------HCCC
T ss_conf 968999999999974887366454110112559988999999999849963785288427899999986-------3699
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCC--C-HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 60023435465654321234553-2113479998643332221--0-026887541012332222333222211246210
Q gi|254780432|r 121 KFRIVTFEGAFHGRTLATISAGG-KLQYLEGFGPKIEGFDQAK--F-CDLQSLKNQISNDTAAILIEPIQGEGGVRKVPE 196 (392)
Q Consensus 121 r~~ii~~~~~yHG~t~~a~s~s~-~~~~~~~~~p~~~~~~~~~--~-~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~ 196 (392)
-+ || ..+.-|=.++.++-.+| .+.+-.+.. . +.+...+ + ..++..+++.++.+|.+++..+-++-|..+.
T Consensus 102 D~-VI-l~rnaHyS~~~A~elaG~~~~~v~~~~-~-~~~~I~~~~~~~~Iee~~~e~gk~~aL~llt~pdy~yGn~~d-- 175 (386)
T PRK09331 102 DY-VV-LDGLAHYTSYVAAERAGLNVREVPKTG-Y-PDYRITPEAYAEKIEEVEDETGKPPALALLTHVDGNYGNLHD-- 175 (386)
T ss_pred CE-EE-ECCCCHHHHHHHHHHCCCEEEEECCCC-C-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHH--
T ss_conf 97-98-448405999999997598589936877-7-234508005799999999861898559999688866445463--
Q ss_pred HHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCCCCCCCCCCCCCCCC-CCC-----
Q ss_conf 123221102234572131011003444455531011124545302103--444444344321000111222-223-----
Q gi|254780432|r 197 EFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA--KGMGGGFPIGACLATNEVAAC-MNQ----- 268 (392)
Q Consensus 197 ~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g--K~l~gG~P~sav~~~~~i~~~-~~~----- 268 (392)
++++.++|++||+++++||-.+ .|| +-.....+-+|+++-| |.+++=-|.|.+.++++..+. +..
T Consensus 176 --~~~i~~iah~~~ip~lvdeA~~-~~~----~P~~a~~~GaD~~v~S~HK~~~s~t~sgvL~~~~e~~d~v~R~s~~~~ 248 (386)
T PRK09331 176 --AKKIAKVAHQYGIPLLLNGAYT-VGR----MPVDGKELGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSKKFG 248 (386)
T ss_pred --HHHHHHHHHHCCCCEEEECCCC-CCC----CCCCHHHCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHCCCCCH
T ss_conf --8999999987498189814433-577----897466639988986345444234631244304530155652264305
Q ss_pred ----CCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEC-----
Q ss_conf ----32234532111100123345543201-22210112100002688999988679707550464009998724-----
Q gi|254780432|r 269 ----GSHGSTYGGNVLAMVLGEKVLNIIQS-DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTV----- 338 (392)
Q Consensus 269 ----~~~~~T~~gnpl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~----- 338 (392)
...+.|..|.|+-. -+|+++..++ -+.+++--++.++++++|+++-.-. -+...+|...++. ++.+
T Consensus 249 ~Kev~mLgcTs~g~psy~--LMASfd~vrerv~~~d~ev~~ar~~~~El~kIeG~~-~lge~P~~hdl~~-fdtt~~~~i 324 (386)
T PRK09331 249 VKEVELLGCTLRGAPLVT--LMASFPHVKERVKNWDEEVEKARWFVDELEKIEGFK-QLGEKPRNHDLMR-FETPSFDEI 324 (386)
T ss_pred HHHHHHHCCCCCCCHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-HCCCCCCCCCCEE-ECCCCEEEE
T ss_conf 789988536334640899--980659999999877899999999999986087655-4065778777435-337641222
Q ss_pred -----CCHHHHHHHHHHCCEEEEE-CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -----9989999999968989962-689889955898688999999999999999985
Q gi|254780432|r 339 -----FSPALLAAKFRDECLLTAP-SSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 339 -----~~~~~~~~~l~~~Gll~~~-~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
...-.+.+.|.++|+...- ...|.+.+. .+-.|+++++.+++.|.+-..+-
T Consensus 325 a~~~~~~Gy~l~~~Lk~r~I~ge~sg~t~~lkl~-s~G~t~E~v~~li~A~keIaeky 381 (386)
T PRK09331 325 AKKHKRRGFFLYEELKKRGIHGIKPGLTKEFKLS-TYGLTWEQVEYVADSFKEIAEKY 381 (386)
T ss_pred HHHCCCCCEEHHHHHHHCCCEEEECCCCEEEEEE-ECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 3204866056799997679649955710178788-61787899999999999999982
No 259
>pfam01053 Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme. This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor.
Probab=98.94 E-value=3.9e-09 Score=80.18 Aligned_cols=279 Identities=17% Similarity=0.225 Sum_probs=162.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 50687578189999986520101333123565554035677766543200134786002343546565432123455321
Q gi|254780432|r 66 HVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL 145 (392)
Q Consensus 66 ~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~ 145 (392)
+.-.+..||....|+++|.+.-+.+.++.+.||--|+.+++--. -++|. .||+-+..|.|.....-
T Consensus 44 ~~Y~R~~nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~ll~l-------~~~Gd-~il~~~~~Yg~t~~~~~------ 109 (381)
T pfam01053 44 YDYSRSGNPTRDALEERIAALEGGEAALAFSSGMAAIFAALLAL-------LKAGD-HVVATDDLYGGTYRLFE------ 109 (381)
T ss_pred CEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHC-------CCCCC-EEEEECCCCCCHHHHHH------
T ss_conf 52418988679999999999819973899358899999999755-------79999-89995787375899999------
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 13479998643332221002688754101233222233322221124621012322110223457213101100344445
Q gi|254780432|r 146 QYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRT 225 (392)
Q Consensus 146 ~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRt 225 (392)
...+.++. .+..++..|.+.+++.+.+++..|++|..-.-- ...++ ++++.++|+++|+++|+|-... |
T Consensus 110 ~~l~~~Gi---~v~~~d~~d~~~~~~~i~~~T~li~~EspsNP~-l~v~D---i~~ia~iA~~~gi~~vVDNT~a----t 178 (381)
T pfam01053 110 KVLPRFGI---EVTFVDPSDLDALEAAIKPNTKAVFLETPTNPL-LKVVD---IEAIAKIAKKHGALVVVDNTFA----S 178 (381)
T ss_pred HHHHHCCC---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-EEECC---CHHHHHHHHHCCCEEEEECCCC----H
T ss_conf 98871585---067626658678997558884299997489986-05126---0999999864573599878860----0
Q ss_pred CCCCCCCCCCCCCCEEE--CCCCCCC-C-CCCCCCCCC--CCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHC--C
Q ss_conf 55310111245453021--0344444-4-344321000--11122222332--234532111100123345543201--2
Q gi|254780432|r 226 GKLFAYEWANVKPDIMT--IAKGMGG-G-FPIGACLAT--NEVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQS--D 295 (392)
Q Consensus 226 G~~f~~e~~gi~PDi~~--~gK~l~g-G-~P~sav~~~--~~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~~--~ 295 (392)
.+.+.-...=.||++ +.|-++| | .=.|+|+.+ .++.+.+.... .|.+ -+|..|...+..|+-+.- +
T Consensus 179 --P~~~~Pl~~GaDivvhS~TKyi~GhsDvl~G~v~~~~~~~~~~~l~~~~~~~G~~--~~p~~a~l~~rgl~TL~lR~~ 254 (381)
T pfam01053 179 --PYLQRPLELGADIVVHSATKYIGGHSDVVGGVVVVNGREELAKRLRFLQNATGAV--LSPFDAWLLLRGLKTLGLRME 254 (381)
T ss_pred --HHHCCCHHCCCCEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCC--CCHHHHHHHHHCCCCHHHHHH
T ss_conf --5212413307977997534303688761305999688266899999999861687--886888998714787999999
Q ss_pred CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHCC-EEEE
Q ss_conf 2210112100002688999988679707550------------------46400999872499899999999689-8996
Q gi|254780432|r 296 GFLENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDEC-LLTA 356 (392)
Q Consensus 296 ~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~G-ll~~ 356 (392)
.-.+++.+ +.++.+.||. |..| .|.|-|++|++... .. ..++.+.- ++..
T Consensus 255 ~~~~nA~~--------lA~~L~~hp~-V~~V~yPgL~s~p~~~~~~r~~~g~ggl~sf~l~~~-~~-~~~f~d~l~lf~~ 323 (381)
T pfam01053 255 RHQENALK--------LAEFLEEHPK-VEKVYYPGLPSHPGHELAKKQMSGFGGMLSFELKGG-EA-ASKFLDNLKLFSL 323 (381)
T ss_pred HHHHHHHH--------HHHHHHHCCC-CCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCH-HH-HHHHHHHCCCCEE
T ss_conf 98889999--------9999972999-777957589998049999975899997318986789-99-9999984771335
Q ss_pred ---ECC---------------------------CCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf ---268---------------------------98899558986889999999999999999
Q gi|254780432|r 357 ---PSS---------------------------DNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 357 ---~~~---------------------------~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
-.+ ++.||++- --|+.+++++-|+++|.
T Consensus 324 ~~SlGg~eSLi~~p~~~~h~~~~~~~r~~~gi~~~liRlSv----GlEd~~DLi~DL~qAL~ 381 (381)
T pfam01053 324 AESLGGVESLISHPATMTHASIPPEEREAAGITDGLIRLSV----GIEDVDDLIADLKQALE 381 (381)
T ss_pred CCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE----EECCHHHHHHHHHHHCC
T ss_conf 35658756065576413531189999986697939599995----00999999999998639
No 260
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.94 E-value=5.4e-08 Score=72.71 Aligned_cols=167 Identities=17% Similarity=0.188 Sum_probs=112.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45068757818999998652010133312356555403567776654320013478600234354656543212345532
Q gi|254780432|r 65 WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 65 ~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
.+.-.++.||....|+++|.+.-+.+..+.+.||--|+.+++- +.. ++| ..||+-+..|.|.....-
T Consensus 60 g~~YsR~gNPT~~~LE~~la~LEg~~~a~~~sSGmaAi~~~ll-~ll------~~G-dhiv~~~~~YggT~~l~~----- 126 (436)
T PRK07812 60 GNIYTRIMNPTQDVVEQRIAALEGGVAALFLASGQAAETFAIL-NLA------GAG-DHIVSSPRLYGGTYNLFH----- 126 (436)
T ss_pred CCEECCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH-HHH------CCC-CEEEEECCCCCCHHHHHH-----
T ss_conf 9642089886699999999998299878996479999999999-961------889-889994886687899999-----
Q ss_pred CCCCCCCCCCCCCCCCC-CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC
Q ss_conf 11347999864333222-10026887541012332222333222211246210123221102234572131011003444
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQA-KFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG 223 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~-~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 223 (392)
.....++- .+..+ ...|++.+++.+.++.-.|++|..-.-- ...++ ++.+.++|+++|+++|+|-...
T Consensus 127 -~~l~~~Gi---~v~fv~d~~d~~~~~~~i~~~Tklv~~EtpsNP~-l~v~D---i~~ia~iA~~~g~~~vVDNTfa--- 195 (436)
T PRK07812 127 -YTLPKLGI---EVSFVEDPDDLDSWRAAVRPNTKAFFAETISNPQ-IDILD---IPGVAEVAHEAGVPLIVDNTIA--- 195 (436)
T ss_pred -HHHHHCCC---CEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCC-EECCC---HHHHHHHHHHCCCEEEEECCCC---
T ss_conf -99765287---4169679988999997458674399996489986-05236---6999999998599299626864---
Q ss_pred CCCCCCCCCCCCCCCCEEE--CCCCCCC-CCCCCCCCC
Q ss_conf 4555310111245453021--0344444-434432100
Q gi|254780432|r 224 RTGKLFAYEWANVKPDIMT--IAKGMGG-GFPIGACLA 258 (392)
Q Consensus 224 RtG~~f~~e~~gi~PDi~~--~gK~l~g-G~P~sav~~ 258 (392)
| .+.+.-...=.||++ ..|-|+| |=-+++++.
T Consensus 196 -t--P~~~~Pl~~GaDivihS~TKyi~GHsDvlgG~vv 230 (436)
T PRK07812 196 -T--PYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred -C--CCCCCCCCCCCCEEEEECCEECCCCCCCEEEEEE
T ss_conf -6--2303764148988999645031589770436998
No 261
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=98.93 E-value=2.5e-07 Score=68.42 Aligned_cols=318 Identities=19% Similarity=0.187 Sum_probs=170.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHHHHHCCCCC--CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 87899999999999973145068757818--9999986520101333--1235655540356777665432001347860
Q gi|254780432|r 47 GHSHPELVAILKSQSEKLWHVSNLYQSTQ--QEIFANHLIHSTFADR--VFFTNSGAESVECAIKTARRYHYMAGKTNKF 122 (392)
Q Consensus 47 Gh~~p~i~~a~~~q~~~~~~~~~~~~~~~--~~~la~~L~~~~~~~~--v~f~~SGseA~e~Aiklar~~~~~~g~t~r~ 122 (392)
..-||...+|+...+.+-......|.... ..+..+.+++..+.+. =.++++|||||-.|++.||.+. ...|.
T Consensus 34 ~~~~~~a~~a~~~~~~~N~~~~~~~P~~~~mE~~vv~~~a~l~g~p~~~G~~tsGGTes~l~Al~aaR~~~----~~~~p 109 (375)
T PRK13520 34 TKPHPIAREAHEMFLETNLGDPGLFPGTAKLEREVVRMLGELLHLPDAYGYITSGGTEANIQAVRAARNLA----DAEKP 109 (375)
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHC----CCCCC
T ss_conf 78349999999999961789853387799999999999999809998808995618999999999997626----89998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 02343546565432123455321134799986433322210026887541012332222333222211246210123221
Q gi|254780432|r 123 RIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQL 202 (392)
Q Consensus 123 ~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l 202 (392)
.|+.-+ ..|-...-+..+-|- ....-+++..-.-|.+++++.+.+++.+++.---...-|.+-| ++.|
T Consensus 110 ~iv~~~-~aH~s~~Kaa~~~gi-------~~~~vp~d~~~~~d~~~l~~~i~~~ti~vvatagtt~~G~iDp----i~~i 177 (375)
T PRK13520 110 NIVVPE-SAHFSFDKAADMLGL-------ELRRAPLDEDYRVDVKSVEDLIDDNTIGIVGIAGTTELGQVDP----IPEL 177 (375)
T ss_pred EEEEEC-CCHHHHHHHHHHCCC-------EEEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCCCCCEEECC----HHHH
T ss_conf 799967-316999999997495-------5699403888869899999988649579999258878822359----9999
Q ss_pred HCCCCCCCCEEEECCCCCCCCCCCCCCCCC--CC--CC-CCCEEEC--CCCCCCCCCCCCCCCCCC-CCCCCC---C---
Q ss_conf 102234572131011003444455531011--12--45-4530210--344444434432100011-122222---3---
Q gi|254780432|r 203 RKICDDIDALLIFDEVQTGYGRTGKLFAYE--WA--NV-KPDIMTI--AKGMGGGFPIGACLATNE-VAACMN---Q--- 268 (392)
Q Consensus 203 ~~lc~~~g~llI~DEV~tG~GRtG~~f~~e--~~--gi-~PDi~~~--gK~l~gG~P~sav~~~~~-i~~~~~---~--- 268 (392)
.++|++||+.+-+|=-.-||- -.|.-+ .| ++ .-|=+++ =|-+..-++.|.++.+++ +.+.+. +
T Consensus 178 ~~i~~~~~i~lHVDaa~GGf~---~pf~~~~~~~df~l~~vdSIs~d~HK~g~~p~g~g~vl~r~~~~~~~~~~~~~Yl~ 254 (375)
T PRK13520 178 SKIALENDIFLHVDAAFGGFV---IPFLDDPYDFDFSLPGVSSITIDPHKMGLAPIPAGGILFRDPEFLDALDVDTPYLT 254 (375)
T ss_pred HHHHHHCCCEEEEECCCCEEE---EECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHCCCCHHHC
T ss_conf 999997597499862552022---11257664000477880264246111365157715999878899987246771435
Q ss_pred CCCCCCCCCCC--CCHHHHHHHHHHHHCCCCCC---HHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCHHH
Q ss_conf 32234532111--10012334554320122210---11210000268899998867970755046400999872499899
Q gi|254780432|r 269 GSHGSTYGGNV--LAMVLGEKVLNIIQSDGFLE---NVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSPAL 343 (392)
Q Consensus 269 ~~~~~T~~gnp--l~~aaa~a~L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~~ 343 (392)
+....|..|+- ...+++-++|..+=.+.+.+ +.-+..++|.++|+++ .+ ..+.+. .-.++++... +...
T Consensus 255 ~~~~~tl~gSR~g~~~~~~Wa~l~~~G~~Gy~~~~~~~~~~a~~la~~l~~~--g~-e~~~~P--~~~iV~Fr~~-~~~~ 328 (375)
T PRK13520 255 SKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRYLVEELEKL--GF-EPVIEP--VLNIVAFDDP-NPHE 328 (375)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CC-EEECCC--CCEEEEEECC-CHHH
T ss_conf 8987356058877559999999999739999999999999999999999867--99-897089--8139999579-9999
Q ss_pred HHHHHHHCCEEEEE-CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999968989962-68988995589868899999999999999998
Q gi|254780432|r 344 LAAKFRDECLLTAP-SSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 344 ~~~~l~~~Gll~~~-~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
+...++++|-.+.. ..++.+++..--.+|.+.+|++++-|+++.++
T Consensus 329 l~d~l~~~GW~v~~~~~P~~lhivv~~~~~~~~id~fl~DL~e~~~~ 375 (375)
T PRK13520 329 VRKKLRERGWRVSVTRCPEALRIVVMPHVTREHIEAFLEDLDEVKKR 375 (375)
T ss_pred HHHHHHHCCCEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_conf 99999976987457889984899995999989999999999999529
No 262
>PRK03262 consensus
Probab=98.92 E-value=4.8e-08 Score=73.07 Aligned_cols=286 Identities=16% Similarity=0.213 Sum_probs=159.6
Q ss_pred CCCCCHHHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101--3331235655540356777665432001347860023435465654321234553211
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTF--ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ 146 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~--~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~ 146 (392)
+.|..+...+|-+.|.+..+ .+.+..+|+.+|..+..++.- ..+|+..|+....+|-=-...+ .+.|-..
T Consensus 52 nrYPD~~~~~Lr~aiA~~~gv~~~~I~vGnGSdE~I~~i~~~f-------~~pg~d~vl~~~PtF~~Y~~~a-~~~g~~~ 123 (355)
T PRK03262 52 NRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAF-------CEPGKDAILYCPPTYGMYAVSA-ETIGVEI 123 (355)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHH-------HCCCCCEEEECCCCHHHHHHHH-HHCCCEE
T ss_conf 0398998899999999986858557999378999999999998-------6389977997788859999999-9739838
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 34799986433322210026887541012332222333222211246210123221102234572131011003444455
Q gi|254780432|r 147 YLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG 226 (392)
Q Consensus 147 ~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG 226 (392)
.. -|..+++ ..|++++.+.+.+.-..+|.-|=.=. |.. .+.+-+..+.+.|.. ++++|+||-.--|..-.
T Consensus 124 ~~---vp~~~~~----~~dl~~~~~~~~~~klv~l~nPNNPT-G~~-~~~~el~~l~~~~~~-~~lvVvDEAY~eF~~~~ 193 (355)
T PRK03262 124 RT---VPTLENW----QLDLQAIADNLDGVKVVYVCSPNNPT-GNL-INPQDLRTLLELTRG-KAIVVADEAYIEFCPQA 193 (355)
T ss_pred EE---EECCCCC----CCCHHHHHHHCCCCCEEEECCCCCCC-CCC-CCHHHHHHHHHHCCC-CCEEEEECHHHHHCCCC
T ss_conf 99---6465566----76899999640488889976899987-644-699999999976876-72898730255436562
Q ss_pred CCCCCCCCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH--
Q ss_conf 531011124545302---1034444-4434432100011122222332234532111100123345543201222101--
Q gi|254780432|r 227 KLFAYEWANVKPDIM---TIAKGMG-GGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN-- 300 (392)
Q Consensus 227 ~~f~~e~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~-- 300 (392)
. ..+...--|.++ +|+|..| .|+=+|..++++++++.+..... .|.-|.++..+|.++|..-..+.+.++
T Consensus 194 s--~~~l~~~~~NliVlRTfSK~~gLAGlRlGy~ia~~~ii~~l~k~~~--p~~vn~~~~~~a~~al~~~~~~~~~~~i~ 269 (355)
T PRK03262 194 S--LAGWLAEYPNLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIA--PYPLSTPVADIAAQALSPQGIEAMRERVA 269 (355)
T ss_pred C--HHHHHHCCCCEEEEECHHHHHCCCCCCEEEEECCHHHHHHHHHHCC--CCCCCHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 1--5567640774467612677724665350543179999999998438--99877999999999972265999999999
Q ss_pred -HHHHCCHHHHHHHHHHHHCCCEEEEE-CCCEEEEEEEECCCHHHHHHHHHHCCEEEEECC-----CCEEEECCCCCCCH
Q ss_conf -12100002688999988679707550-464009998724998999999996898996268-----98899558986889
Q gi|254780432|r 301 -VINIAKILFEGLTAIKNRFPNMFLEV-RGQGLLIGLKTVFSPALLAAKFRDECLLTAPSS-----DNVVRILPPLTITA 373 (392)
Q Consensus 301 -~~~~g~~l~~~L~~l~~~~~~~v~~v-RG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~-----~~~irl~Ppl~it~ 373 (392)
+.+--+++.+.|+++ + .+..| ...+=++-+++ .+...+.+.|+++|++++... ++.+|++ +=|+
T Consensus 270 ~i~~~R~~l~~~L~~l----~-~~~~v~pS~aNFvl~~~-~~~~~~~~~L~~~gIlVR~~~~~~gl~~~lRis---igt~ 340 (355)
T PRK03262 270 QINANRAWLIAALKEI----A-CVEQVFDSETNYILARF-TASSAVFKSLWDQGIILRDQNKQPSLSNCLRIT---IGTR 340 (355)
T ss_pred HHHHHHHHHHHHHHHC----C-CCCEECCCCCCEEEEEC-CCHHHHHHHHHHCCCEEEECCCCCCCCCEEEEE---CCCH
T ss_conf 9999999999999848----9-98606899782899978-999999999996993896688878999989996---6999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780432|r 374 EEIHEGLERIER 385 (392)
Q Consensus 374 ~eid~~i~~l~~ 385 (392)
+|-+.++++|+.
T Consensus 341 een~~~l~aLka 352 (355)
T PRK03262 341 EECQRVIDALRA 352 (355)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999713
No 263
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.90 E-value=9.8e-08 Score=71.02 Aligned_cols=167 Identities=16% Similarity=0.128 Sum_probs=112.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45068757818999998652010133312356555403567776654320013478600234354656543212345532
Q gi|254780432|r 65 WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 65 ~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
.+.-.+..||....|+++|.+.-+.+.++.+.||--|+.+++- +.. ++| ..||+-+..|.|.....-
T Consensus 60 g~~YsR~gNPT~~~lE~~la~LEgg~~a~~~sSGmAAI~~~ll-~ll------~~G-dhiv~~~~lYggT~~l~~----- 126 (437)
T PRK05613 60 GPVYSRLTNPTVEALENRIASLEGGVHAVAFASGQAATTAAIL-NLA------GAG-DHIVTSPRLYGGTETLFL----- 126 (437)
T ss_pred CCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH-HHH------CCC-CEEEECCCCCCCHHHHHH-----
T ss_conf 9712089887899999999998399858996589999999999-972------889-989978987634789977-----
Q ss_pred CCCCCCCCCCCCCCCCCC-CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC
Q ss_conf 113479998643332221-0026887541012332222333222211246210123221102234572131011003444
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQAK-FCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG 223 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~-~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 223 (392)
.....++- .+..+. .+|.+.+++.+.++.-.|++|..-.-. ...++ ++.+.++|+++|+++|+|-+..
T Consensus 127 -~~l~~~GI---~~~fvd~~~d~~~~~~~i~~~Tklv~~EtpsNP~-l~v~D---i~~ia~iA~~~g~~~vVDNTfa--- 195 (437)
T PRK05613 127 -VTLNRLGI---ETTFVENPDDPESWQAAVQPNTKAFFGETFANPQ-ADVLD---IPAVAEVAHRNQVPLIIDNTIA--- 195 (437)
T ss_pred -HHHHHCCC---EEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCEEEECCCCC---
T ss_conf -67751681---5899479999999997378785599998799986-53357---9999999987698399516652---
Q ss_pred CCCCCCCCCCCCCCCCEEE--CCCCCCC-CCCCCCCCC
Q ss_conf 4555310111245453021--0344444-434432100
Q gi|254780432|r 224 RTGKLFAYEWANVKPDIMT--IAKGMGG-GFPIGACLA 258 (392)
Q Consensus 224 RtG~~f~~e~~gi~PDi~~--~gK~l~g-G~P~sav~~ 258 (392)
..+.++-...=.||++ ..|-|+| |=-+++++.
T Consensus 196 ---tP~~~~Pl~~GaDiVvhS~TKYl~GHsDvlgG~vv 230 (437)
T PRK05613 196 ---TAALVRPLELGADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred ---CHHCCCHHHHCCCEEEEECCCCCCCCCCEEEEEEE
T ss_conf ---03106856748988999555122688764516998
No 264
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.88 E-value=5.1e-08 Score=72.86 Aligned_cols=164 Identities=21% Similarity=0.228 Sum_probs=112.0
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 68757818999998652010133312356555403567776654320013478600234354656543212345532113
Q gi|254780432|r 68 SNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQY 147 (392)
Q Consensus 68 ~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~ 147 (392)
-.+..||....|+++|.+.-+...++.+.||=-|+.+++- +. -++| ..||+-.+.|.|.....- .+
T Consensus 52 YsR~gnPT~~~LE~~la~LEg~~~a~~~~SGMaAIs~~ll-~l------l~~G-d~iv~~~~~Yggt~~l~~------~~ 117 (424)
T PRK06084 52 YTRIMNPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQ-TV------AEAG-DNIVSVAKLYGGTYNLLA------HT 117 (424)
T ss_pred ECCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH-HH------CCCC-CEEEECCCCCCCHHHHHH------HH
T ss_conf 1199886799999999998599848995478999999999-84------1899-989982798563899999------98
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 47999864333222100268875410123322223332222112462101232211022345721310110034444555
Q gi|254780432|r 148 LEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK 227 (392)
Q Consensus 148 ~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~ 227 (392)
...++- .+..++..|.+.+++.+.++.-.|++|..-.--. ..++ ++++.++|+++|+++|+|-+.+.
T Consensus 118 l~~~gi---~~~fvd~~d~~~~~~~i~~~Tklv~~EsP~NPtl-~v~D---I~~i~~iA~~~g~~~vVDNT~at------ 184 (424)
T PRK06084 118 LPRIGI---QTRFAAHDDIAALEALIDERTKAVFCESIGNPAG-NIVD---LQALADAAHRHGVPLIVDNTVAT------ 184 (424)
T ss_pred HHHCCC---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCC-EECC---HHHHHHHHHHCCCEEEEECCCCC------
T ss_conf 874686---1599588677999975487651899843899986-5037---89999999874995995457635------
Q ss_pred CCCCCCCCCCCCEEE--CCCCCCC-CCCCCCCCC
Q ss_conf 310111245453021--0344444-434432100
Q gi|254780432|r 228 LFAYEWANVKPDIMT--IAKGMGG-GFPIGACLA 258 (392)
Q Consensus 228 ~f~~e~~gi~PDi~~--~gK~l~g-G~P~sav~~ 258 (392)
.+.+.-+..=.||++ +.|-++| |=-+++++.
T Consensus 185 P~~~~Pl~~GaDivvhS~TKYi~GHsDvl~G~vi 218 (424)
T PRK06084 185 PVLCRPFEHGADIVVHSLTKYMGGHGTSIGGIVV 218 (424)
T ss_pred CCCCCHHHHCCCEEEEECCEECCCCCCEEEEEEE
T ss_conf 2326804528988999665220588760367897
No 265
>KOG1549 consensus
Probab=98.88 E-value=1.1e-07 Score=70.63 Aligned_cols=326 Identities=18% Similarity=0.218 Sum_probs=175.5
Q ss_pred CCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCCCC-CCCHH--HHHHHHHHHH-H---CCCCCCCCCCCCCCCH
Q ss_conf 9764641022674357878999999999999731-450687-57818--9999986520-1---0133312356555403
Q gi|254780432|r 31 GIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVSNL-YQSTQ--QEIFANHLIH-S---TFADRVFFTNSGAESV 102 (392)
Q Consensus 31 G~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~~~-~~~~~--~~~la~~L~~-~---~~~~~v~f~~SGseA~ 102 (392)
..-|+|..+ .|-.+|+|.+|+.+.+... .+-... |.+.. ..+.++..++ . .+-| +.|++++||++
T Consensus 43 ~~vyld~~a------t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~d-IiFts~ATEs~ 115 (428)
T KOG1549 43 RPVYLDNQA------TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSD-IVFTSGATESN 115 (428)
T ss_pred CCEEEECCC------CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEECCCHHHH
T ss_conf 607970676------78999899999999999852599855420233589999999999984899773-79947960788
Q ss_pred HHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 56777-66543200134786002343546565432123455321134799986433322210026887541012332222
Q gi|254780432|r 103 ECAIK-TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 103 e~Aik-lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
-.++| ++|.+.. ++.| .||++... |..-+.+. +..-.+++.-..-++......|++.++..+..++.+|+
T Consensus 116 Nlvl~~v~~~~~~---~~~k-~iitl~~e-H~~v~~s~----~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~ 186 (428)
T KOG1549 116 NLVLKGVARFFGD---KTKK-HIITLQTE-HPCVLDSC----RALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVS 186 (428)
T ss_pred HHHHHHHHCCCCC---CCCC-EEEEECCC-CCCHHHHH----HHHHHCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 8999872202456---6663-69995045-76004899----99986682799915686552118999975387743999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEC--CCCCCCCCC-CCCCCC
Q ss_conf 33322221124621012322110223457213101100344445553101112454530210--344444434-432100
Q gi|254780432|r 182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTI--AKGMGGGFP-IGACLA 258 (392)
Q Consensus 182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~--gK~l~gG~P-~sav~~ 258 (392)
+.-|..+-|+..| ++.|-++|+++++.+..|--|. .| +. -.+--++.+|++++ =|.+| -| +|++.+
T Consensus 187 I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa-vG---~i-~vDV~eln~D~~s~s~HK~yg--p~~iGaLYv 255 (428)
T KOG1549 187 IMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA-VG---KI-PVDVQELNADFLSISAHKIYG--PPGIGALYV 255 (428)
T ss_pred EEECCCCCCCCCC----HHHHHHHHCCCCCEEEEEHHHH-CC---CC-CCCHHHCCCHHEEEECCCCCC--CCCCEEEEE
T ss_conf 9700367421056----9999998574780798454543-49---74-411888582124643253027--996069997
Q ss_pred CCCCCC-----CCCCC-----CCCCCCC-CCCCCHHHHHHHHHHHHCCC-C-CCHHHHHCCHHHHHHHHHHHHCCCEE--
Q ss_conf 011122-----22233-----2234532-11110012334554320122-2-10112100002688999988679707--
Q gi|254780432|r 259 TNEVAA-----CMNQG-----SHGSTYG-GNVLAMVLGEKVLNIIQSDG-F-LENVINIAKILFEGLTAIKNRFPNMF-- 323 (392)
Q Consensus 259 ~~~i~~-----~~~~~-----~~~~T~~-gnpl~~aaa~a~L~~l~~~~-l-~~~~~~~g~~l~~~L~~l~~~~~~~v-- 323 (392)
+.+.-. .+..+ .-+.|-. .+.++.-+| .++..++. . .....+....+..++ ....++..
T Consensus 256 r~~~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA---~e~~~~~~~~~~~~~~~~~~~ll~~i---~~~~~~~~~~ 329 (428)
T KOG1549 256 RRKRPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSA---AEFVNKEMAYDEAIIKRLSEKLLMGI---GQSLPEVTLN 329 (428)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH---HHHHHHHCCHHHHHHHHHHHHHHHHH---HHHCCHHHCC
T ss_conf 46887654457646774301220577574135436889---99987502125899999999999887---6407354404
Q ss_pred ---EEECCCEEEEEEEECCC------HHH---------------HHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHH
Q ss_conf ---55046400999872499------899---------------999999689899626898899558986889999999
Q gi|254780432|r 324 ---LEVRGQGLLIGLKTVFS------PAL---------------LAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEG 379 (392)
Q Consensus 324 ---~~vRG~Gl~~~ie~~~~------~~~---------------~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~ 379 (392)
.+-.....++++..+.. .+. ..-.++..|.-... ....|||.--.--+++|++.+
T Consensus 330 G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~-~~~~iRis~G~y~t~~di~~~ 408 (428)
T KOG1549 330 GSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDL-AHSSIRISIGRYTTEEDIDYL 408 (428)
T ss_pred CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHHCCCCHHH-HCCEEEEEEEEECCHHHHHHH
T ss_conf 7860004652366025655720021010444023305443888862116543742322-112069863220768999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999985
Q gi|254780432|r 380 LERIERTAIKL 390 (392)
Q Consensus 380 i~~l~~al~~L 390 (392)
.+.+.+.+..+
T Consensus 409 ~~~i~~~v~~~ 419 (428)
T KOG1549 409 VDAIKKLVSLL 419 (428)
T ss_pred HHHHHHHHHHC
T ss_conf 99999998735
No 266
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=98.88 E-value=2.1e-08 Score=75.46 Aligned_cols=279 Identities=18% Similarity=0.189 Sum_probs=159.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101333123565554035677766543200134786002343546565432123455321134
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYL 148 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~ 148 (392)
.+..||....|+++|.+.-+.+.++.+.||--|+.+++- +.. ++| ..||+-+..|.| |..-+ .. .
T Consensus 48 sR~gnPT~~~le~~la~LEg~~~a~~~sSGmaAi~~~ll-~~l------~~G-d~il~~~~~Yg~-t~~l~---~~---l 112 (384)
T PRK08574 48 SREENPTVRPLEEKLAKLEGGVDALAFNSGMAAISTLFF-SLL------KAG-DEVVLPMEAYGT-TLRLL---KS---L 112 (384)
T ss_pred ECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-HHC------CCC-CEEEECCCCCHH-HHHHH---HH---H
T ss_conf 389886599999999998199718995587999999999-816------899-989984897145-99999---99---9
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 79998643332221002688754101233222233322221124621012322110223457213101100344445553
Q gi|254780432|r 149 EGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKL 228 (392)
Q Consensus 149 ~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~ 228 (392)
..++- .+......+.+.+++...++.-.|++|+.-.-. ...++ ++++.++|+++|+++|+|-+... .
T Consensus 113 ~~~Gi---~v~~~~~~~~~~~~~~~~~~Tklv~~EspsNP~-l~v~D---i~~ia~iA~~~g~~~vvDNT~at------P 179 (384)
T PRK08574 113 EKFGV---RVRLAYPSTEDLIEAIKESRTKLVFIETITNPT-LRVID---VPEVAKAAKDLGAILVVDNTFAT------P 179 (384)
T ss_pred HHHCC---EEEEECCCCHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCEEEEECCCCH------H
T ss_conf 86085---799948997899997447885499998899987-63478---59999999775985997377512------6
Q ss_pred CCCCCCCCCCCEEE--CCCCCCCC-CC-CCCCCCCC-CCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHC--CCCCC
Q ss_conf 10111245453021--03444444-34-43210001-112222233--2234532111100123345543201--22210
Q gi|254780432|r 229 FAYEWANVKPDIMT--IAKGMGGG-FP-IGACLATN-EVAACMNQG--SHGSTYGGNVLAMVLGEKVLNIIQS--DGFLE 299 (392)
Q Consensus 229 f~~e~~gi~PDi~~--~gK~l~gG-~P-~sav~~~~-~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~ 299 (392)
+.++-...=.||++ +.|-++|- =- .|++++++ ++.+.+... ..|.+. +|..|...+..|+-+.- +...+
T Consensus 180 ~~~~Pl~~GaDivvhS~TKyi~GHsdv~~G~vv~~~~~~~~~l~~~~~~~G~~l--sp~~a~l~~rgl~TL~lR~~~~~~ 257 (384)
T PRK08574 180 ILYRPLEHGADFVVHSLTKYIAGHNDVLGGVAVVWNGEFLEELWVWRRRLGTIM--QPFEAWLVLRGLKTLEVRFERQCE 257 (384)
T ss_pred HHCCHHHHCCCEEEEECCCEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCC--CCHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 426806648988999546210388673413898351788999999999828988--923478886065879999999999
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CC-CEEEEEEEECCCHHHHHHHHHHCCEE------
Q ss_conf 112100002688999988679707550------------------46-40099987249989999999968989------
Q gi|254780432|r 300 NVINIAKILFEGLTAIKNRFPNMFLEV------------------RG-QGLLIGLKTVFSPALLAAKFRDECLL------ 354 (392)
Q Consensus 300 ~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG-~Gl~~~ie~~~~~~~~~~~l~~~Gll------ 354 (392)
|+.++ .++.++||. |..| +| .|.|++|++..+.+...+.+-.--++
T Consensus 258 nA~~l--------A~~L~~hp~-V~~V~yPgl~shp~~~~a~~~~~g~~G~~~sf~l~~~~~~~~~f~~~L~lf~~~~Sl 328 (384)
T PRK08574 258 NAMAI--------AEFLSEHPK-VREVHYPGLPSDPYHEVAKRLFGDLYGGVVSFRVKGGRDAVLKFLRSLKLIFPSPSL 328 (384)
T ss_pred HHHHH--------HHHHHCCCC-CCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEECCCC
T ss_conf 99999--------999970999-888989888999478999986799976499999729999999999828857343164
Q ss_pred -------EEE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -------962-----------------689889955898688999999999999999985
Q gi|254780432|r 355 -------TAP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 355 -------~~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
..| ..++.|||+. --|+.+++++-|+++|.+|
T Consensus 329 Gg~eSLi~~P~~~sh~~~~~e~r~~~Gi~~~liRlSv----GlEd~~DLi~DL~~AL~~i 384 (384)
T PRK08574 329 GGVESIATYPVASAASPIPEEDRKILGITEDLVRLSV----GLEDVEDLIEDLDQALNSV 384 (384)
T ss_pred CCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE----CCCCHHHHHHHHHHHHHCC
T ss_conf 7542222473103675599999997298939499994----1099999999999998349
No 267
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.84 E-value=1.7e-07 Score=69.43 Aligned_cols=167 Identities=10% Similarity=0.095 Sum_probs=109.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45068757818999998652010133312356555403567776654320013478600234354656543212345532
Q gi|254780432|r 65 WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 65 ~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
.+.-.+..||....|+++|...-+.+.++.+.||--|+.+++- +.. ++| ..||+-+..|-|.... +
T Consensus 52 g~~YsR~gNPT~~~lE~~la~LEgg~~a~~~sSGmaAi~~~ll-~ll------~~G-d~iv~~~~~YGgT~~l-~----- 117 (432)
T PRK06702 52 GYIYTRIGNPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVL-NIC------SSG-DHLLCSSTVYGGTFNL-F----- 117 (432)
T ss_pred CCEECCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHH-HHC------CCC-CEEEECCCCCHHHHHH-H-----
T ss_conf 9603189986799999999998399828985328999999999-962------899-9899848871217999-8-----
Q ss_pred CCCCCCCCCCCCCCCCCCCH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC
Q ss_conf 11347999864333222100-26887541012332222333222211246210123221102234572131011003444
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQAKFC-DLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG 223 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~-d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 223 (392)
......++- .+..+... +.+.+++.+.+++..|++|.+-.--. .+++ ++++.++|+++|+++|+|-+..
T Consensus 118 ~~~l~~~GI---~v~~vd~~~~~~~~~~~~~~~Tkli~~EtpsNP~l-~v~D---i~~ia~iA~~~gi~~vVDNTfa--- 187 (432)
T PRK06702 118 GVSLRKLGI---DVTFFNPNLTADEIVALANDKTKLVYAESLGNPAM-NVLN---FKEFSDAAKELEVPFIVDNTLA--- 187 (432)
T ss_pred HHHEECCCE---EEEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCC-EEEC---HHHHHHHHHHCCCEEEEECCCC---
T ss_conf 640202887---99987899999999974578750899972799973-2027---9999999976698189635764---
Q ss_pred CCCCCCCCCCCCCCCCEEE--CCCCCCC-CCCCCCCCC
Q ss_conf 4555310111245453021--0344444-434432100
Q gi|254780432|r 224 RTGKLFAYEWANVKPDIMT--IAKGMGG-GFPIGACLA 258 (392)
Q Consensus 224 RtG~~f~~e~~gi~PDi~~--~gK~l~g-G~P~sav~~ 258 (392)
..+.++-...=.||++ ..|-|+| |=-+++++.
T Consensus 188 ---tP~~~rPl~~GaDiVvhS~TKyi~GHsD~lgG~vv 222 (432)
T PRK06702 188 ---TPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred ---CCCCCCCHHCCCCEEEEECCCCCCCCCCEEEEEEE
T ss_conf ---30104620128989998534215688750335997
No 268
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.83 E-value=1.7e-07 Score=69.38 Aligned_cols=302 Identities=17% Similarity=0.192 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999999999731450687578189999986520101333123565554035677766543200134786002343546
Q gi|254780432|r 51 PELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGA 130 (392)
Q Consensus 51 p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~ 130 (392)
.+.++++.+.+++-+.+. -+...+|.+.+.+-.+...+.-++|||.|.+.|+|..- . .+| +.||+-.-.
T Consensus 15 ~~e~~~v~~vl~sg~i~~----G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~-i-----g~G-DeVI~ps~T 83 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG----GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALA-I-----GPG-DEVIVPSFT 83 (374)
T ss_pred HHHHHHHHHHHHCCCCCC----CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCC-C-----CCC-CEEEECCCC
T ss_conf 579999999996197416----86789999999998499739996684899999999648-7-----999-979936875
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 5654321234553211347999864333222100-268875410123322223332222112462101232211022345
Q gi|254780432|r 131 FHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFC-DLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDI 209 (392)
Q Consensus 131 yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~-d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~ 209 (392)
| ..|-+.--+.+..|-.-+++...+| |.+.+++.+.+++-|||.==+.|. +++ +..++++|++|
T Consensus 84 f--------vATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl~G~----~~d---m~~i~~la~~~ 148 (374)
T COG0399 84 F--------VATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHLAGQ----PCD---MDAIMALAKRH 148 (374)
T ss_pred H--------HHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEHHCCC----CCC---HHHHHHHHHHC
T ss_conf 3--------98899999769967999647641477999999871557749998512168----779---89999999873
Q ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC----CCCCCCCCCCCCCCCCC-CCCCCCC----C-----------
Q ss_conf 72131011003444455531011124545302103----44444434432100011-1222223----3-----------
Q gi|254780432|r 210 DALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA----KGMGGGFPIGACLATNE-VAACMNQ----G----------- 269 (392)
Q Consensus 210 g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g----K~l~gG~P~sav~~~~~-i~~~~~~----~----------- 269 (392)
|+.+|-|=-|. +|-+ +.-...|=--|+.++| |.|+.| ==|+++++++ +.+.... +
T Consensus 149 ~l~vIEDaAqa-~Ga~---y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~ 223 (374)
T COG0399 149 GLPVIEDAAQA-HGAT---YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLH 223 (374)
T ss_pred CCEEEEECCHH-CCCE---ECCCCCCCCCCEEEEEECCCCCCCCC-CCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEE
T ss_conf 98499876032-0672---35842556664689986587765566-7507983889999999999983767786656435
Q ss_pred -CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE-----EEEEEEEC---CC
Q ss_conf -2234532111100123345543201222101121000026889999886797075504640-----09998724---99
Q gi|254780432|r 270 -SHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG-----LLIGLKTV---FS 340 (392)
Q Consensus 270 -~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G-----l~~~ie~~---~~ 340 (392)
..|.-+..+.+.+|.+++-|+.+++ +.++-+++-++..+.|+++. ++.......+ -+..+.+. ..
T Consensus 224 ~~~G~N~rm~~iqAAigl~QL~~l~~--~~~~R~~~a~~Y~~~l~~~~----~~~~p~~~~~~~~~~~~~~i~~~~~~~~ 297 (374)
T COG0399 224 EELGYNYRLTEIQAAIGLAQLERLDE--INERRREIAQIYAEALKGLP----GITLPPEPDGAVHAWHLYTILVDEEGIS 297 (374)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCC----CCCCCCCCCCCEEEEEEEEEEECCCCCC
T ss_conf 21330038779999999999988899--99999999999999861078----7433578987612303668982677778
Q ss_pred HHHHHHHHHHCCEE----EEECCC-----------------------CEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 89999999968989----962689-----------------------88995589868899999999999999998
Q gi|254780432|r 341 PALLAAKFRDECLL----TAPSSD-----------------------NVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 341 ~~~~~~~l~~~Gll----~~~~~~-----------------------~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
...+.+.+.++|+. ..|.+. +.+.+----.+|++++++++++|.+++.+
T Consensus 298 R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 298 RDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCCCHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 9999999986787751663134432666504456667882288996174872589998999999999999998504
No 269
>PRK05939 hypothetical protein; Provisional
Probab=98.80 E-value=7.2e-08 Score=71.92 Aligned_cols=165 Identities=13% Similarity=0.251 Sum_probs=111.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 50687578189999986520101333123565554035677766543200134786002343546565432123455321
Q gi|254780432|r 66 HVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL 145 (392)
Q Consensus 66 ~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~ 145 (392)
+.-.+..||....|+++|.+.-+.+.++.++||--|+.+++- +.. ++|. .||+-+..|.|.... + ..
T Consensus 38 ~~YsR~~nPT~~~le~~la~LEgg~~a~~~sSGMaAi~~~l~-~ll------~~Gd-~il~~~~~YG~t~~l-~---~~- 104 (396)
T PRK05939 38 FTYARQGTPTTAALEAKITEMEGGVGTVCFATGMAAIAAVFL-TLL------RAGD-HLVSSQYLFGNTNSL-L---GT- 104 (396)
T ss_pred CEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-HHC------CCCC-EEEECCCCCCHHHHH-H---HH-
T ss_conf 634089986799999999998299749996579999999999-835------8898-899538869229999-9---98-
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 13479998643332221002688754101233222233322221124621012322110223457213101100344445
Q gi|254780432|r 146 QYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRT 225 (392)
Q Consensus 146 ~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRt 225 (392)
...++- .+..++..|.+.+++.+..++-.|++|+.-.-. ...++ ++++.++|+++|+++|+|-+...
T Consensus 105 --l~~~GI---~v~~vd~~d~~~~~~ai~~~Tklv~~EspsNP~-l~v~D---i~~i~~ia~~~g~~~vVDNT~at---- 171 (396)
T PRK05939 105 --LQGLGV---EVTMVDATDVQQVAAAIRPNTRMVFVETIANPG-TQVAD---LAGIGALCRERGLVYVVDNTMTS---- 171 (396)
T ss_pred --HHHCCE---EEEEECCCCHHHHHHHHCCCCCEEEEEECCCCC-CCCCC---HHHHHHHHHHCCCEEEEECCCCH----
T ss_conf --653186---999988979899998618566189998089998-70758---99999999983997999777630----
Q ss_pred CCCCCCCCCCCCCCEEE--CCCCCCCC-CCCCCCCC
Q ss_conf 55310111245453021--03444444-34432100
Q gi|254780432|r 226 GKLFAYEWANVKPDIMT--IAKGMGGG-FPIGACLA 258 (392)
Q Consensus 226 G~~f~~e~~gi~PDi~~--~gK~l~gG-~P~sav~~ 258 (392)
.+.++-...=.||++ +.|-++|- =-++++++
T Consensus 172 --P~~~~Pl~~GaDivvhS~TKyi~GhsD~l~G~vv 205 (396)
T PRK05939 172 --PWLFRPKSVGASLVINSLSKYIAGHGNALGGAVT 205 (396)
T ss_pred --HHHCCHHHHCCCEEEEECCCCCCCCCCEEEEEEE
T ss_conf --4205855638988998343302588774769996
No 270
>PRK08637 hypothetical protein; Provisional
Probab=98.79 E-value=3.5e-07 Score=67.39 Aligned_cols=281 Identities=12% Similarity=0.120 Sum_probs=143.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCHH-HHHHH
Q ss_conf 2356555403567776654320013478600234354656543212345-532113479998643332221002-68875
Q gi|254780432|r 93 FFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISA-GGKLQYLEGFGPKIEGFDQAKFCD-LQSLK 170 (392)
Q Consensus 93 ~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~-s~~~~~~~~~~p~~~~~~~~~~~d-~~~l~ 170 (392)
.-+++|++|...+.+.-. .+|.. |+.-+..|-- .-..+.. .|.....- |+.+.-....+.. .+.++
T Consensus 73 v~T~Ggt~al~~~~~~~~-------~~gd~-Vlip~P~W~n-y~~i~~~~~G~~v~~y---~~~~~~~~~~~~~~~~~l~ 140 (386)
T PRK08637 73 IVTNALTHGLSLVADLFV-------NQGDT-VLLPDHNWGN-YKLVFNTRNGANLQTY---PIFDKDGHFTTDALVEALQ 140 (386)
T ss_pred EECCCHHHHHHHHHHHHH-------CCCCE-EEEECCCCHH-HHHHHHHHCCCCEEEE---EEECCCCCCCHHHHHHHHH
T ss_conf 875746899999999984-------79998-9991798541-7999998379841677---4264678978199999998
Q ss_pred HHCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHCCCCCC-----CCEEEECCCCCCCCCCCC----CCCCCCCCCCCCE
Q ss_conf 41012332222-3332222112462101232211022345-----721310110034444555----3101112454530
Q gi|254780432|r 171 NQISNDTAAIL-IEPIQGEGGVRKVPEEFLQQLRKICDDI-----DALLIFDEVQTGYGRTGK----LFAYEWANVKPDI 240 (392)
Q Consensus 171 ~~~~~~iAavi-~Epv~g~~G~~~~~~~~l~~l~~lc~~~-----g~llI~DEV~tG~GRtG~----~f~~e~~gi~PDi 240 (392)
.....+-..+| --| ..--|. .++.+-|+.|.++|+++ ++++|+||..-||.--+. +|. ...+..+.+
T Consensus 141 ~~~~~~~vvll~n~p-hNPTG~-~~t~ee~~~i~~~~~~~~~~g~~i~~i~D~aY~~~~~~~~~~~~~~~-~~~~~~~~~ 217 (386)
T PRK08637 141 AAYNKDKVILILNFP-NNPTGY-TPTHKEVTTIVEAIKALADKGTKVIAVVDDAYYGLFYEDVYKESLFT-ALANLHSNI 217 (386)
T ss_pred HCCCCCCEEEEECCC-CCCCCC-CCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCHHHH-HHHCCCCCE
T ss_conf 457788389998789-998886-89999999999999987733888899996014566308843224999-862157764
Q ss_pred E-----ECCCCCCC-CCCCCCCC---CCCCCCCCCCCC---CCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCHHHHHCCH
Q ss_conf 2-----10344444-43443210---001112222233---2234532111100123345543201222-1011210000
Q gi|254780432|r 241 M-----TIAKGMGG-GFPIGACL---ATNEVAACMNQG---SHGSTYGGNVLAMVLGEKVLNIIQSDGF-LENVINIAKI 307 (392)
Q Consensus 241 ~-----~~gK~l~g-G~P~sav~---~~~~i~~~~~~~---~~~~T~~gnpl~~aaa~a~L~~l~~~~l-~~~~~~~g~~ 307 (392)
+ .+||..+- |.=+|+++ .++++.+.+... ..-+|++.-| . .++.++++++..++. .+..++.-+.
T Consensus 218 ~~i~~~s~SK~~~myG~RvG~l~~~~~~~~~~~~~~~~~~~~~r~~~Snpp-~-~gq~~~~~~L~~~~~~~~e~~e~~~~ 295 (386)
T PRK08637 218 LAVKLDGATKEFFAWGFRVGFITFGTSDQTTKEVLEAKVKGLIRSNISSGP-H-PSQSAVLHVLKNPDQFDKEIEQKIQI 295 (386)
T ss_pred EEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCC-H-HHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 899961310125570023157886059899999999999999860448856-8-99999999975908899999999999
Q ss_pred HHHHHHHH----HHHCCCE--EEEECCCEEEEEEEECC-CHHHHHHHHHH-CCEEEEECCCCEEEECCCCCCCHHHHHHH
Q ss_conf 26889999----8867970--75504640099987249-98999999996-89899626898899558986889999999
Q gi|254780432|r 308 LFEGLTAI----KNRFPNM--FLEVRGQGLLIGLKTVF-SPALLAAKFRD-ECLLTAPSSDNVVRILPPLTITAEEIHEG 379 (392)
Q Consensus 308 l~~~L~~l----~~~~~~~--v~~vRG~Gl~~~ie~~~-~~~~~~~~l~~-~Gll~~~~~~~~irl~Ppl~it~~eid~~ 379 (392)
++++.+.+ .+..... .--....|++..+.+.. ++..+...+++ .++.+.+.+++-||++=+ .+++++|+++
T Consensus 296 m~~R~~~~~~~l~~~~~~~~~~~~p~~~G~F~~i~~~~~~~e~l~~~Lle~~~V~~v~~g~~~iRIs~a-als~~nI~~~ 374 (386)
T PRK08637 296 LKERYEVTKEVVYDDQYDDHWQAYPFNSGYFMCLKLKDVDAEELRVHLLEKYGIGVIALNETDLRIAFS-CVEEEDIPHV 374 (386)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEE-ECCHHHHHHH
T ss_conf 999999999997420435686324567615886479989999999999863958999559997799998-5889999999
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999999852
Q gi|254780432|r 380 LERIERTAIKLS 391 (392)
Q Consensus 380 i~~l~~al~~L~ 391 (392)
+++|.+++.+|.
T Consensus 375 ~~~I~~al~~Lk 386 (386)
T PRK08637 375 FDSIAKAIDDLR 386 (386)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999998539
No 271
>PRK07049 methionine gamma-lyase; Validated
Probab=98.75 E-value=2.1e-08 Score=75.35 Aligned_cols=290 Identities=13% Similarity=0.163 Sum_probs=158.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 506875781899999865201013331235655540356777-6654320013478600234354656543212345532
Q gi|254780432|r 66 HVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIK-TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 66 ~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aik-lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
+.-.++.||....|+++|...-+.+.++.+.||--|+.+++- ++ ++|. .||+-+..|.|.....-
T Consensus 75 ~~YsR~~NPT~~~lE~~iA~LEg~~~a~~~sSGmaAi~~~ll~ll--------~~Gd-~iv~~~~~YggT~~l~~----- 140 (427)
T PRK07049 75 LVYSRFNHPNSEIVEDRLAVYEGAEAAALFSSGMSAIATTLLAFV--------RPGD-VIVHSQPLYGGTETLLA----- 140 (427)
T ss_pred CEECCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHC--------CCCC-EEEECCCCCHHHHHHHH-----
T ss_conf 414289887799999999998099848993469999999999851--------8999-99989998278999999-----
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCC-----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC------CCCEE
Q ss_conf 113479998643332221002688754101-----2332222333222211246210123221102234------57213
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQAKFCDLQSLKNQIS-----NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDD------IDALL 213 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~-----~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~------~g~ll 213 (392)
.....++- ..+..++..|.+.+++.+. .++-.|++|..-.-. ...++ ++.+.++|++ |++++
T Consensus 141 -~~l~~~GI--~~~~~~d~~d~~~~~~~i~~~~~~~~Tklv~~EspsNP~-l~v~D---i~~ia~ia~~~g~~~~~~i~~ 213 (427)
T PRK07049 141 -KTFRNFGV--GAVGFADGVSEAAIEAAAEAAAAKGRVSLIYIETPANPT-NALVD---VAAVRRVADAIEARQGHRPII 213 (427)
T ss_pred -HHHHHCCC--EEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCC-CCCCC---HHHHHHHHHHHCHHCCCCCEE
T ss_conf -99997598--899970899999999999862147870699997899987-72658---899999999844201478769
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCEEE--CCCCCCC-C-CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHH
Q ss_conf 10110034444555310111245453021--0344444-4-34432100011122222332--23453211110012334
Q gi|254780432|r 214 IFDEVQTGYGRTGKLFAYEWANVKPDIMT--IAKGMGG-G-FPIGACLATNEVAACMNQGS--HGSTYGGNVLAMVLGEK 287 (392)
Q Consensus 214 I~DEV~tG~GRtG~~f~~e~~gi~PDi~~--~gK~l~g-G-~P~sav~~~~~i~~~~~~~~--~~~T~~gnpl~~aaa~a 287 (392)
|+|-+.+. .+.++-...=.||++ ..|-|+| | .=.|+|++++++.+.+.... .|.+. +|..|.-.+.
T Consensus 214 vvDNT~at------P~~~~Pl~~GaDivvhS~TKyl~GHsDvl~G~v~~~~~~~~~l~~~~~~~G~~~--sP~~a~L~lr 285 (427)
T PRK07049 214 ACDNTLLG------PVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRKALVRQVRALRGAIGTQL--DPHSCWMLGR 285 (427)
T ss_pred EEECCCCC------CCCCCCHHHCCCEEEEECCCEECCCCCCCCCEEECCHHHHHHHHHHHHHHCCCC--CCHHHHHHHC
T ss_conf 99788623------213681542898899963614248877513516467999999999875314778--9067788863
Q ss_pred HHHHHH--CCCCCCHHHHHCCHHHHHHHHHHH-HCCCEE-----------EEECCCEEEEEEEECCCHHHHHHHHHHCCE
Q ss_conf 554320--122210112100002688999988-679707-----------550464009998724998999999996898
Q gi|254780432|r 288 VLNIIQ--SDGFLENVINIAKILFEGLTAIKN-RFPNMF-----------LEVRGQGLLIGLKTVFSPALLAAKFRDECL 353 (392)
Q Consensus 288 ~L~~l~--~~~l~~~~~~~g~~l~~~L~~l~~-~~~~~v-----------~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gl 353 (392)
.|+-+. =+.-.+|+.++.+.|.+. .+... .||+.. .+.+|.|.|++|++........+.+-.--+
T Consensus 286 GL~TL~lRm~r~~~nA~~vA~~L~~h-p~V~~V~Ypgl~~~~~~~~~l~~~~~~G~Gg~~sf~l~g~~~~~~~f~~~l~l 364 (427)
T PRK07049 286 SLETLVLRMERANRNARAVAEFLRDH-PKVEKLHYLPFLDPDSAYGAVFKRQCTGAGSTFSFDIKGGQAAAFRFLNALQI 364 (427)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCC
T ss_conf 68869999999999999999999848-98327977897888768999999727898438999972889999999982880
Q ss_pred EE-------------EE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99-------------62-----------------68988995589868899999999999999998
Q gi|254780432|r 354 LT-------------AP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 354 l~-------------~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
+. .| ..++.|||+. --|+++++++=|+++|..
T Consensus 365 f~~a~SlGg~eSLi~hPa~~th~~~~~e~r~~~Gi~~~liRlSV----GlEd~eDLi~DL~qAL~a 426 (427)
T PRK07049 365 FKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESLIRLSI----GIEHPDDLIADLAQALDA 426 (427)
T ss_pred CEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE----CCCCHHHHHHHHHHHHHC
T ss_conf 63642668765031375311564699999996597929699992----339999999999999832
No 272
>KOG0259 consensus
Probab=98.70 E-value=5.7e-06 Score=59.46 Aligned_cols=319 Identities=19% Similarity=0.235 Sum_probs=161.8
Q ss_pred HHCCCCCCH----------HHHHHHHHHHHHCCCC---CCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCHHHH
Q ss_conf 435787899----------9999999999731450---687578189999986520101----33312356555403567
Q gi|254780432|r 43 VNSLGHSHP----------ELVAILKSQSEKLWHV---SNLYQSTQQEIFANHLIHSTF----ADRVFFTNSGAESVECA 105 (392)
Q Consensus 43 ~~~lGh~~p----------~i~~a~~~q~~~~~~~---~~~~~~~~~~~la~~L~~~~~----~~~v~f~~SGseA~e~A 105 (392)
...|||+.| +..+|+.+++....+- +....-+.+.+.|+.|-...+ ++-|+.+.+=+.|.|.+
T Consensus 63 iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~ 142 (447)
T KOG0259 63 ILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELA 142 (447)
T ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHH
T ss_conf 31378899876666668889999999999638877768765648899999998631898756747669955636999999
Q ss_pred HHH-HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC-CCCC
Q ss_conf 776-65432001347860023435465654321234553211347999864333222100268875410123322-2233
Q gi|254780432|r 106 IKT-ARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAA-ILIE 183 (392)
Q Consensus 106 ikl-ar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAa-vi~E 183 (392)
+.. |+ ++-. |+.=+.+|-= ..+.+...... -+.|..++ +.-..-|++.++..++++.+| +|+.
T Consensus 143 i~~LA~--------p~aN-ILlPrPGfp~--Y~~~a~~~~lE-VR~ydlLP---e~~weIDL~~veal~DENT~AivviN 207 (447)
T KOG0259 143 ISSLAN--------PGAN-ILLPRPGFPL--YDTRAIYSGLE-VRYYDLLP---EKDWEIDLDGVEALADENTVAIVVIN 207 (447)
T ss_pred HHHHCC--------CCCC-EECCCCCCCH--HHHHHHHCCCE-EEEECCCC---CCCCEECHHHHHHHHCCCEEEEEEEC
T ss_conf 997438--------9986-6547999846--88766325843-67632567---65615316889976446706999967
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC-C-CCCCCCCCEEE--CCCCC-CCCCCCCCCCC
Q ss_conf 32222112462101232211022345721310110034444555310-1-11245453021--03444-44434432100
Q gi|254780432|r 184 PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFA-Y-EWANVKPDIMT--IAKGM-GGGFPIGACLA 258 (392)
Q Consensus 184 pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~-~-e~~gi~PDi~~--~gK~l-~gG~P~sav~~ 258 (392)
|-.--|+ +++.+-|+++.++|+|++++.|+|||+.-+-=-++.|- . ...-++|=|.+ ++|+- --|.-+|=++.
T Consensus 208 P~NPcGn--Vys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~ 285 (447)
T KOG0259 208 PNNPCGN--VYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIAL 285 (447)
T ss_pred CCCCCCC--CCCHHHHHHHHHHHHHHCCEEEEHHHCCEEECCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEE
T ss_conf 9999865--15199999999999984976976111231331799730013305657368615423564047730346897
Q ss_pred CC--------CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC---CCCCCH----HHHHCCHHHHHHHHHHHHCCCEE
Q ss_conf 01--------1122222332234532111100123345543201---222101----12100002688999988679707
Q gi|254780432|r 259 TN--------EVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS---DGFLEN----VINIAKILFEGLTAIKNRFPNMF 323 (392)
Q Consensus 259 ~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~----~~~~g~~l~~~L~~l~~~~~~~v 323 (392)
.+ .+.+.+..... -.|=.|....++|--|.+ +++.+. .+...+.--++|++ -|.+.
T Consensus 286 hD~~gvf~~~~~~q~~~~~~~-----~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~----IP~l~ 356 (447)
T KOG0259 286 HDPRGVFRDTKVVQGIKNFLD-----IIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKD----IPCLT 356 (447)
T ss_pred ECCCCCCCCHHHHHHHHHHHH-----CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCC
T ss_conf 566654244189999999985-----459950859877588987483999999999987627999999845----98766
Q ss_pred EEECCCEE---EEEEEE-----CCCHHHHHHH-HHHCCEEEEEC----CCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 55046400---999872-----4998999999-99689899626----8988995589868899999999999999998
Q gi|254780432|r 324 LEVRGQGL---LIGLKT-----VFSPALLAAK-FRDECLLTAPS----SDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 324 ~~vRG~Gl---~~~ie~-----~~~~~~~~~~-l~~~Gll~~~~----~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
-.++-.|. |..+++ ..++..++.+ .+++-+++.|. .+|-+|+. +++.++.+.+++++|..-+.+
T Consensus 357 cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~--i~~~~~~leea~~Rik~Fc~R 433 (447)
T KOG0259 357 CPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIV--ITVEEEMLEEAFSRIKEFCDR 433 (447)
T ss_pred CCCCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHH
T ss_conf 67588751589852666540022450899999863142687251203678848999--705737899999999999986
No 273
>TIGR01979 sufS cysteine desulfurases, SufS subfamily; InterPro: IPR010970 Cysteine desulphurases are pyridoxal-phosphate enzymes which catalyse the removal of sulphur from L-cysteine to form L-alanine and elemental sulphur. These enzymes have been shown to play an important role in the biosynthesis of iron-sulphur clusters, thionucleosides in tRNA, thiamine, biotin, lipoate and molydopterin This entry represents a subfamily of NifS-related cysteine desulphurases that are often involved in iron-sulphur cluster formation, which is needed for nitrogen fixation and other vital functions . Many of these enzymes, in addition to cysteine desulphurase activity, also show selenocysteine lyase activity where L-selenocysteine is converted to L-alanine and selenide . Some of these enzymes are much more specific for selenocysteine than cysteine and are thus believed to function in selenium metabolism rather than sulphur metabolism. Structural studies of the E. coli and Synechocystis enzymes indicate that they are homodimers which show a similar fold to other members of the alpha family of pyridoxal-phosphate enzymes .; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=98.68 E-value=1.1e-06 Score=64.04 Aligned_cols=341 Identities=18% Similarity=0.184 Sum_probs=186.3
Q ss_pred CCCCEEEEEECC-CEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHH-CCCCCCCCCCHHH----HHH---HHH
Q ss_conf 888748985010-3799679976464102267435787899999999999973-1450687578189----999---986
Q gi|254780432|r 12 DQSDIRFEKGKG-AWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEK-LWHVSNLYQSTQQ----EIF---ANH 82 (392)
Q Consensus 12 ~~~p~~i~~a~G-~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~-~~~~~~~~~~~~~----~~l---a~~ 82 (392)
..||+.=.+-+| .-|. ||| |+.++ +.+..|++|+.+.-.+ ..++++.- |... ..+ -++
T Consensus 5 ~DFPiL~~~~~Gg~pLv------YLD--sAAT~----QKP~~Vida~~~yY~~~nANVHRG~-H~Ls~~AT~~YE~~R~k 71 (409)
T TIGR01979 5 EDFPILKRKVNGGKPLV------YLD--SAATS----QKPQAVIDAVEEYYRKSNANVHRGI-HTLSVRATEAYEEAREK 71 (409)
T ss_pred CCCCHHCCCCCCCCCEE------EEC--CCCCC----CCCHHHHHHHHHHHHHHCCCCCHHH-HHHHHHHHHHHHHHHHH
T ss_conf 11774305467998417------734--85100----2847799999999875167001689-99999999999999999
Q ss_pred HHHHCC---CCCCCCCCCCCCCHH-HHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 520101---333123565554035-6777665432001-34786002343546565432123455321134799986433
Q gi|254780432|r 83 LIHSTF---ADRVFFTNSGAESVE-CAIKTARRYHYMA-GKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEG 157 (392)
Q Consensus 83 L~~~~~---~~~v~f~~SGseA~e-~Aiklar~~~~~~-g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~ 157 (392)
+.+--+ .+.+.||.+-|||.= .|.-+.+.+ ... -.+|---|||.-. .|= -+.-+.+- ..+.+..-..-.
T Consensus 72 va~FiNA~~~~EIvFT~gtTe~iNLvA~s~g~~~-l~~av~pGDeIv~s~mE-HHa-NiVPWQ~l---~~r~GA~lk~~~ 145 (409)
T TIGR01979 72 VAKFINAASAEEIVFTRGTTESINLVAYSWGRSR-LKAAVDPGDEIVISEME-HHA-NIVPWQLL---AERTGATLKFIP 145 (409)
T ss_pred HHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCC-CHHHCCCCCEEEECCHH-HHC-CHHHHHHH---HHHHCCEEEEEE
T ss_conf 9985088998547870760278899999831101-34253898879840111-001-21479999---976098789974
Q ss_pred CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 3222100268875410123322223332222112462101232211022345721310110034444555310111245-
Q gi|254780432|r 158 FDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV- 236 (392)
Q Consensus 158 ~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi- 236 (392)
....--=|++.+++.+.+++=-|=+-=|..--|.+.| ++.+.++.+++|+++++|=-|.=. +..-|+
T Consensus 146 l~~~G~ld~~~l~~~~~~~TKlVa~~HvSNVlGtvnP----~~ei~~~AH~~GA~vlvDGAQ~~p--------H~pvDv~ 213 (409)
T TIGR01979 146 LDDDGTLDLDDLEELLTEKTKLVAITHVSNVLGTVNP----VEEIIKLAHQVGAKVLVDGAQAVP--------HMPVDVQ 213 (409)
T ss_pred CCCCCEEEHHHHHHHHHCCCEEEEEEEEECCCCCCCC----HHHHHHHHHHCCCEEEEECCCCCC--------CCCCCHH
T ss_conf 4887605188899883269829999742022030148----789999986579769986255758--------9898856
Q ss_pred --CCCEEECC--CCCCCCCC--CCCCCCCCCCCCCCCCCC-----------CC-CCCCCCC-------------CCHHHH
Q ss_conf --45302103--44444434--432100011122222332-----------23-4532111-------------100123
Q gi|254780432|r 237 --KPDIMTIA--KGMGGGFP--IGACLATNEVAACMNQGS-----------HG-STYGGNV-------------LAMVLG 285 (392)
Q Consensus 237 --~PDi~~~g--K~l~gG~P--~sav~~~~~i~~~~~~~~-----------~~-~T~~gnp-------------l~~aaa 285 (392)
.=|+.+|| |-+| | +|+..+++++.+.+.|.. .. +||..-| +++.||
T Consensus 214 ~ldcDFyvFSGHKmyG---PtGiGVLYGK~~lLe~MPPf~gGG~MI~~V~~~~g~ty~~~P~KFEAGTPniagviGLgaA 290 (409)
T TIGR01979 214 ALDCDFYVFSGHKMYG---PTGIGVLYGKEELLEEMPPFLGGGEMIEEVSLEEGTTYNEAPHKFEAGTPNIAGVIGLGAA 290 (409)
T ss_pred HHCCCEEEEECCHHHC---CCCCEEEHHHHHHHHHCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 5578744561004525---7663011278898864778466986157888057711367875456888358999999999
Q ss_pred HHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCE--EE--EECCCEEEEEEEECCC-HHHHHHHHHHCCEEEEECCC
Q ss_conf 3455432012221011210000268899998867970--75--5046400999872499-89999999968989962689
Q gi|254780432|r 286 EKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNM--FL--EVRGQGLLIGLKTVFS-PALLAAKFRDECLLTAPSSD 360 (392)
Q Consensus 286 ~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~--v~--~vRG~Gl~~~ie~~~~-~~~~~~~l~~~Gll~~~~~~ 360 (392)
..-|+-|--+++.++.+++-.++.++|.++ |++ ++ +-.-+|..++|.+..- +=.+..-|=++||=++..+.
T Consensus 291 idYl~~iG~~~I~~~E~~L~~yal~~L~~i----pg~~iyGP~~~~~R~g~isFn~~g~HpHDVg~~LD~~GiAvR~GHH 366 (409)
T TIGR01979 291 IDYLEKIGLEKIEAHEKELTAYALERLGEI----PGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHH 366 (409)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHCC----CCEEEECCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCH
T ss_conf 999852387899999999999999996018----9858746877432643333025888700223012267756861705
Q ss_pred ------------CEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ------------889955898688999999999999999985
Q gi|254780432|r 361 ------------NVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 361 ------------~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.+.|-+=.+.=|+||||.+++.|.++.+-+
T Consensus 367 CAqPlm~~~~v~atcRASf~~YNT~ediD~Lv~aL~~v~~~F 408 (409)
T TIGR01979 367 CAQPLMRRFGVPATCRASFYLYNTEEDIDALVEALKKVRKFF 408 (409)
T ss_pred HHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 324898655996367887410389899999999999999860
No 274
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=98.68 E-value=8.4e-07 Score=64.91 Aligned_cols=326 Identities=16% Similarity=0.154 Sum_probs=167.8
Q ss_pred CCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 97646410226743578789999999999997314506875-78189999986520101333123565554035677766
Q gi|254780432|r 31 GIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLY-QSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTA 109 (392)
Q Consensus 31 G~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~-~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aikla 109 (392)
..-|||+..-.|+..+- . +|...+...-..| .+.....|.+.+.+..+++.++.+-+|--|- .-+ .
T Consensus 19 ~dV~iDLLTDSGT~AMS--d--------~QWAa~m~gDesYAGs~sf~~l~~av~d~~g~~~v~PtHQGRaAE-~iL--f 85 (431)
T cd00617 19 EDVYIDLLTDSGTGAMS--D--------YQWAAMMLGDEAYAGSKSFYDLEDAVQDLFGFKHIIPTHQGRGAE-NIL--F 85 (431)
T ss_pred CCEEEEEEECCCCCCCC--H--------HHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHH-HHH--H
T ss_conf 76679701358966588--8--------999998705653257802899999999864997124768767999-999--9
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCC---HHHHHHHHHC----CCCCC
Q ss_conf 543200134786002343546565432123455321----134799986433322210---0268875410----12332
Q gi|254780432|r 110 RRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL----QYLEGFGPKIEGFDQAKF---CDLQSLKNQI----SNDTA 178 (392)
Q Consensus 110 r~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~----~~~~~~~p~~~~~~~~~~---~d~~~l~~~~----~~~iA 178 (392)
+.+ . ++| + +...+.+--.|-+.+...|-. ...+.+.|. ...|| -|++.|++.+ +++|+
T Consensus 86 ~~~-~---k~g-~--~v~~N~hFdTTrahie~~G~~~vdl~~~ea~d~~----~~~pFKGN~Dl~kLe~~i~~~g~~~I~ 154 (431)
T cd00617 86 SIL-L---KPG-R--TVPSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQ----ELIPFKGNIDVAKLEKLIDEVGAENIP 154 (431)
T ss_pred HHH-C---CCC-C--EECCCCCCCCHHHHHHHCCCEEEECCCHHCCCCC----CCCCCCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 983-6---799-8--8446878732589999769978733150004857----778848888999999999873866610
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC--CCCCCC------CCCC---------CCCEE
Q ss_conf 222333222211246210123221102234572131011003444455--531011------1245---------45302
Q gi|254780432|r 179 AILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG--KLFAYE------WANV---------KPDIM 241 (392)
Q Consensus 179 avi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG--~~f~~e------~~gi---------~PDi~ 241 (392)
.|+++---..+|-.|.+-+-++.++++|++||++|++|-. |.. .||-.+ ...| -.|.+
T Consensus 155 ~v~~tiTnN~~GGQPVSm~Nir~v~~la~~~giplvlDaa-----RfaENAyFIk~rE~gy~d~si~eI~rEmfs~aDg~ 229 (431)
T cd00617 155 YIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAA-----RFAENAYFIKEREEGYRDKSIAEIAREMFSYADGC 229 (431)
T ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHH-----HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEE
T ss_conf 8999986368788566789999999999980997998766-----78876899984353024799999999998540278
Q ss_pred ECCCCCCCCCCCCCCCCCCC--CCCCCCC----CCCCCCCCCC-CCCHHHHHHHHHHHHCCCCC-CHHHHHCCHHHHHHH
Q ss_conf 10344444434432100011--1222223----3223453211-11001233455432012221-011210000268899
Q gi|254780432|r 242 TIAKGMGGGFPIGACLATNE--VAACMNQ----GSHGSTYGGN-VLAMVLGEKVLNIIQSDGFL-ENVINIAKILFEGLT 313 (392)
Q Consensus 242 ~~gK~l~gG~P~sav~~~~~--i~~~~~~----~~~~~T~~gn-pl~~aaa~a~L~~l~~~~l~-~~~~~~g~~l~~~L~ 313 (392)
++|-.=-+...+|++++.++ +.+..+. ..-.-||+|= -..+.|...-|+...+++.+ .|+.+.. +|.++|.
T Consensus 230 tmSaKKD~~vniGG~ia~~D~~l~~~~~~~~i~~EGf~TYGGlaGRD~eAlA~GL~E~~d~~yl~~Ri~qv~-yL~~~L~ 308 (431)
T cd00617 230 TMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVR-YLGDRLD 308 (431)
T ss_pred EEEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHH-HHHHHHH
T ss_conf 997031453245567885779999999754320058744356325349998654075436799997799999-9999999
Q ss_pred HHHHHCCCEEEEECCCEEEEEEE-E-------CCCHHHHH-HHHHHCCEE-------EEEC----C------CCEEEECC
Q ss_conf 99886797075504640099987-2-------49989999-999968989-------9626----8------98899558
Q gi|254780432|r 314 AIKNRFPNMFLEVRGQGLLIGLK-T-------VFSPALLA-AKFRDECLL-------TAPS----S------DNVVRILP 367 (392)
Q Consensus 314 ~l~~~~~~~v~~vRG~Gl~~~ie-~-------~~~~~~~~-~~l~~~Gll-------~~~~----~------~~~irl~P 367 (392)
+. --+++..+-|.+.++--. + ..+...++ +..++-||- ..+. + -+.+||+-
T Consensus 309 ~~---GvPvv~P~GGHav~iDA~~flPhip~~~fPa~aLa~~LY~~~GIR~~E~Gs~~~grd~~t~e~~~~~~ElvRLAi 385 (431)
T cd00617 309 EA---GVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAI 385 (431)
T ss_pred HC---CCCEECCCCCEEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCCCCCCCEEEEEC
T ss_conf 88---996666897438997467746899814391899999999970945685402002548887666788622256713
Q ss_pred C-CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9-868899999999999999998
Q gi|254780432|r 368 P-LTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 368 p-l~it~~eid~~i~~l~~al~~ 389 (392)
| =+.|.+++|-+.+++.+...+
T Consensus 386 PRRvYT~~H~dyva~~l~~l~~~ 408 (431)
T cd00617 386 PRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred CCHHCCHHHHHHHHHHHHHHHHH
T ss_conf 50203587999999999999955
No 275
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=98.68 E-value=8.5e-07 Score=64.88 Aligned_cols=316 Identities=19% Similarity=0.226 Sum_probs=174.7
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCHH-------HHHHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHH
Q ss_conf 226743578789999999999997314506-8757818-------999998652010133--312356555403567776
Q gi|254780432|r 39 SGIAVNSLGHSHPELVAILKSQSEKLWHVS-NLYQSTQ-------QEIFANHLIHSTFAD--RVFFTNSGAESVECAIKT 108 (392)
Q Consensus 39 ~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~-~~~~~~~-------~~~la~~L~~~~~~~--~v~f~~SGseA~e~Aikl 108 (392)
+-+|+-...|+.|.+++.+...-+ +++. +.|+.+. .-+|-..|++.+++| .+-+...++-+-|++.-.
T Consensus 23 ~flG~g~y~h~~p~~v~~~~~r~e--f~t~ytpyq~E~sQG~Lq~~~e~Qs~i~eLtGmdv~naSl~d~a~A~aEa~~ma 100 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILENE--FYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLA 100 (398)
T ss_pred CCCCCCCCCCCCHHHHHHHHCHHH--HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 567460256233889898738676--714699989688699999999999999998688835632687677999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 65432001347860023435465654321234553211347999864333222100268875410123322223332222
Q gi|254780432|r 109 ARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGE 188 (392)
Q Consensus 109 ar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~ 188 (392)
.|.- ..+|++|+ ...+-|+.+...+..-..+. ++....-.....-..|+++++..+++++||++++--.--
T Consensus 101 ~~~~-----~~~r~~vl-v~~~~hp~~~~v~~t~~~~~---g~~i~~v~~~~~G~~d~~~l~~~~~~~~a~v~v~~Pn~~ 171 (398)
T cd00613 101 AIRA-----YHKRNKVL-VPDSAHPTNPAVARTRGEPL---GIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPNTL 171 (398)
T ss_pred HHHH-----HCCCCEEE-ECCCCCCCHHHHHHHHHHCC---CCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 9986-----26899899-77877803699999986125---865899426667774658888750788599995279996
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCEEEECCCCC---CCCCCCCCCCCCCCCCCCCEEE-----CCCCCCCCCC-CCCCCCC
Q ss_conf 11246210123221102234572131011003---4444555310111245453021-----0344444434-4321000
Q gi|254780432|r 189 GGVRKVPEEFLQQLRKICDDIDALLIFDEVQT---GYGRTGKLFAYEWANVKPDIMT-----IAKGMGGGFP-IGACLAT 259 (392)
Q Consensus 189 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t---G~GRtG~~f~~e~~gi~PDi~~-----~gK~l~gG~P-~sav~~~ 259 (392)
|++. ++.+.+.++++++|.++|+|=-.. ++-+-|.| | .||++ +|-.+++|=| .|.+.++
T Consensus 172 -G~~e---~~~~~i~~~~h~~gal~~~~~~~~~l~~l~~Pg~~------G--aDI~~g~~q~~g~P~~~GGP~~G~~a~~ 239 (398)
T cd00613 172 -GVFE---DLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEY------G--ADIVVGNLQKTGVPHGGGGPGAGFFAVK 239 (398)
T ss_pred -EEEE---CCHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCC------C--CCEEEECCCCCCCCCCCCCCCCCHHHHH
T ss_conf -2785---19999999998759869997440353155571004------7--8779852511466566688744326679
Q ss_pred CCCCCCCCC----------C-------------------CCCCCCCCCCCCHHHHHHHHHHHHCCCCC---CHHHHHCCH
Q ss_conf 111222223----------3-------------------22345321111001233455432012221---011210000
Q gi|254780432|r 260 NEVAACMNQ----------G-------------------SHGSTYGGNVLAMVLGEKVLNIIQSDGFL---ENVINIAKI 307 (392)
Q Consensus 260 ~~i~~~~~~----------~-------------------~~~~T~~gnpl~~aaa~a~L~~l~~~~l~---~~~~~~g~~ 307 (392)
+++...+.. + .-++.+.++.+-+.+|..-+..+=.+.|. +++-....+
T Consensus 240 ~~l~r~lPgrivg~t~D~~G~~~~~ltlqtreqhIrRekatsnict~qal~al~a~~Y~~~lG~~GL~~va~~~~~~A~Y 319 (398)
T cd00613 240 KELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANY 319 (398)
T ss_pred HHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 98773589985650478888742154413543336777528816432789999999999984886388999999999999
Q ss_pred HHHHHHHHHHHCCCEEEEECCCEEEEE--EEECCCHHHHHHHHHHCCEE----E---EECCCCEEEECCCCCCCHHHHHH
Q ss_conf 268899998867970755046400999--87249989999999968989----9---62689889955898688999999
Q gi|254780432|r 308 LFEGLTAIKNRFPNMFLEVRGQGLLIG--LKTVFSPALLAAKFRDECLL----T---APSSDNVVRILPPLTITAEEIHE 378 (392)
Q Consensus 308 l~~~L~~l~~~~~~~v~~vRG~Gl~~~--ie~~~~~~~~~~~l~~~Gll----~---~~~~~~~irl~Ppl~it~~eid~ 378 (392)
+.++|+++.. +. +-..-.|-- +++..........+.++++. . .+.-++.+-+.|.=+-|++|||+
T Consensus 320 l~~~L~~~~~-----~~-~~~~~~f~EFvi~~~~~~~~~~~~l~k~~i~~G~~~~~~y~~~~~~lli~~TE~~skediD~ 393 (398)
T cd00613 320 LAKRLKEVGG-----VL-PFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDA 393 (398)
T ss_pred HHHHHHHCCC-----CC-CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHH
T ss_conf 9999986389-----82-68998666999976875476899999736215828664688889979998058999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780432|r 379 GLERI 383 (392)
Q Consensus 379 ~i~~l 383 (392)
++++|
T Consensus 394 l~~aL 398 (398)
T cd00613 394 LLEAL 398 (398)
T ss_pred HHHHC
T ss_conf 99749
No 276
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.63 E-value=1.9e-05 Score=56.00 Aligned_cols=336 Identities=16% Similarity=0.161 Sum_probs=179.3
Q ss_pred EEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHH-HHHHCCCCC-CCC--CCHHHHHHHHHHH----HHCC--CCCCCCC
Q ss_conf 9967997646410226743578789999999999-997314506-875--7818999998652----0101--3331235
Q gi|254780432|r 26 LFSENGIPFLDFASGIAVNSLGHSHPELVAILKS-QSEKLWHVS-NLY--QSTQQEIFANHLI----HSTF--ADRVFFT 95 (392)
Q Consensus 26 i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~-q~~~~~~~~-~~~--~~~~~~~la~~L~----~~~~--~~~v~f~ 95 (392)
.-+.+|--|||.. .||-..++...+..+ ..+.-.... ..+ ....+..+.++|. ...| .+.|..+
T Consensus 26 f~lp~~viyLdgn------SLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~ 99 (407)
T COG3844 26 FALPGGVIYLDGN------SLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVT 99 (407)
T ss_pred CCCCCCEEEEECC------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 2599983896064------2346865779999999999987433543202588632253677777644316887846972
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 65554035677766543200134786002343546565432123455321134799986433322210026887541012
Q gi|254780432|r 96 NSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISN 175 (392)
Q Consensus 96 ~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~ 175 (392)
+|-| .|-.-+ ++-.+ +-..+|++|++-.++|--.-.. ..+...... .+ .+..-+ .+-+++++.+.|
T Consensus 100 dtts-~nl~k~-L~aal---r~~~~r~vIv~E~~~fpTdly~---a~g~~~~~~-~~---~~~~~~--~~P~~~~~~~~d 165 (407)
T COG3844 100 DTTS-INLFKV-LAAAL---RPQEGRRVIVSEGDNFPTDLYI---AEGLADLLG-IG---YDLEGV--IAPRALEEAITD 165 (407)
T ss_pred CCCC-HHHHHH-HHHHH---CCCCCCEEEEECCCCCCCCHHH---HCCHHHHHC-CC---CCCEEE--ECHHHHHHHHCC
T ss_conf 7851-679999-99984---6678855996458888851343---123666615-65---451343--272778875046
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC--CCCCCCCEEECCCCCCCCC-C
Q ss_conf 332222333222211246210123221102234572131011003444455531011--1245453021034444443-4
Q gi|254780432|r 176 DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYE--WANVKPDIMTIAKGMGGGF-P 252 (392)
Q Consensus 176 ~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e--~~gi~PDi~~~gK~l~gG~-P 252 (392)
++|-|.+--|+-..|-... +.++.+++.++|++.+.|=--+ - |. +..+ .+|+.=-|-|-=|=|++|- .
T Consensus 166 d~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs-a---Ga-vp~~Lh~~gaDfaigcsyKYLNgGPGa 236 (407)
T COG3844 166 DVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS-A---GA-VPVDLHAAGADFAIGCSYKYLNGGPGA 236 (407)
T ss_pred CEEEEEECCCCCCCCCEEE----HHHHHHHHHHCCCEEEEEHHCC-C---CC-CCEEECCCCCCEEEEEECEECCCCCCC
T ss_conf 5579984563444341223----8899998874586477620112-5---77-651103467874410100002579997
Q ss_pred CCCCCCCCCCCCC--------------------CCCCCCCCCC-CCC-C-CCHHHHHHHHHHHHCCCCCCHHHHHCCHHH
Q ss_conf 4321000111222--------------------2233223453-211-1-100123345543201222101121000026
Q gi|254780432|r 253 IGACLATNEVAAC--------------------MNQGSHGSTY-GGN-V-LAMVLGEKVLNIIQSDGFLENVINIAKILF 309 (392)
Q Consensus 253 ~sav~~~~~i~~~--------------------~~~~~~~~T~-~gn-p-l~~aaa~a~L~~l~~~~l~~~~~~~g~~l~ 309 (392)
.+.+.+.++..+. +.++++..-| .|+ | +++++-...||+..+-+ +..+++++-.|-
T Consensus 237 pa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~-i~~lR~kSlaLT 315 (407)
T COG3844 237 PAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVD-ITELRKKSLALT 315 (407)
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHH
T ss_conf 2068861022454445333435778850123203767651012207822656677740134655337-899987656789
Q ss_pred HHHHHHHHHCCCE-EEEE---C---CCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECC-CCCCCHHHHHHHHH
Q ss_conf 8899998867970-7550---4---6400999872499899999999689899626898899558-98688999999999
Q gi|254780432|r 310 EGLTAIKNRFPNM-FLEV---R---GQGLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILP-PLTITAEEIHEGLE 381 (392)
Q Consensus 310 ~~L~~l~~~~~~~-v~~v---R---G~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~P-pl~it~~eid~~i~ 381 (392)
.-+.+|.+.+-.. ..++ | -+|.-.++..+ ....+.+.+.++|++.-...+++|||.| ||..+-.|+=.+++
T Consensus 316 d~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp-~~~~V~qaLi~rGVigD~R~P~vlRfgftPlY~~~~DVw~AV~ 394 (407)
T COG3844 316 DYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP-HGYQVMQALIDRGVIGDFREPDVLRFGFTPLYVSFVDVWDAVD 394 (407)
T ss_pred HHHHHHHHHCCCCCCCEEECCCHHHHCCCEEEEECC-CHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEECHHHHHHHHH
T ss_conf 999999884156677178466135433660357368-6899999999738413356887356427531111658999999
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999998529
Q gi|254780432|r 382 RIERTAIKLSH 392 (392)
Q Consensus 382 ~l~~al~~L~~ 392 (392)
.|++++.+++|
T Consensus 395 ~L~evL~t~a~ 405 (407)
T COG3844 395 ALEEVLDTLAW 405 (407)
T ss_pred HHHHHHHHHCC
T ss_conf 99999975214
No 277
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=98.61 E-value=1.3e-06 Score=63.78 Aligned_cols=326 Identities=18% Similarity=0.174 Sum_probs=164.8
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 997646410226743578789999999999997314506875-7818999998652010133312356555403567776
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLY-QSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKT 108 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~-~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aikl 108 (392)
....|||+..-.|+..+ +. +|...+...-..| .+.....|.+.+-+.+++..+..+-.|--|- ++
T Consensus 43 s~dV~IDlLTDSGT~AM--Sd--------~QwAamm~gDEsYAGs~sf~~l~~~v~difg~~~viPtHQGRaAE----~I 108 (459)
T PRK13237 43 SEDVYIDLLTDSGTNAM--SD--------KQWAGMMIGDEAYAGSRNFYHLEATVQEYYGFKHVVPTHQGRGAE----NL 108 (459)
T ss_pred CCCEEEECEECCCCCCC--CH--------HHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCHHHH----HH
T ss_conf 56614665115884426--79--------999998730455532401899999999972995240667766689----99
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC----CCCCCCCCCCCCCCCCCC---HHHHHHHHHC----CCC
Q ss_conf 654320013478600234354656543-2123455321----134799986433322210---0268875410----123
Q gi|254780432|r 109 ARRYHYMAGKTNKFRIVTFEGAFHGRT-LATISAGGKL----QYLEGFGPKIEGFDQAKF---CDLQSLKNQI----SND 176 (392)
Q Consensus 109 ar~~~~~~g~t~r~~ii~~~~~yHG~t-~~a~s~s~~~----~~~~~~~p~~~~~~~~~~---~d~~~l~~~~----~~~ 176 (392)
-...-. ++|+ + . -+.+|=.| -+-+-+.|-. ...+.+.|. ...|| -|++.|++.+ .++
T Consensus 109 L~~~l~---k~G~--~-v-p~N~hFdTTrahie~~G~~~~dl~~~ea~d~~----~~~pFKGN~Dl~kLe~~i~~~g~~~ 177 (459)
T PRK13237 109 LSRIAI---KPGQ--Y-V-PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQ----SLHPFKGNVDLDKLQKLIDEVGAEN 177 (459)
T ss_pred HHHHHC---CCCC--E-E-CCCCCCCCHHHHHHHCCCEEEEEECCCCCCCC----CCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 999971---5898--9-5-78868664089999659878741352025867----7889688779999999998748556
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC--CCCCCC------CCCC---------CCC
Q ss_conf 32222333222211246210123221102234572131011003444455--531011------1245---------453
Q gi|254780432|r 177 TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG--KLFAYE------WANV---------KPD 239 (392)
Q Consensus 177 iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG--~~f~~e------~~gi---------~PD 239 (392)
|+.|+++---.++|-.|.+-+-++.++++|++||+++++|-. |.. .||-.+ ...| -.|
T Consensus 178 I~~v~~tiTnN~~GGQPVSm~Nir~v~~la~~~gipl~lDaa-----RfaENAyFIk~RE~gy~~~si~eI~rEmfs~aD 252 (459)
T PRK13237 178 IAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDAT-----RCVENAYFIKEREEGYQDKSIKEILKEMFSYAD 252 (459)
T ss_pred EEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHH-----HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 008999985268788064689999999999980996998766-----788768999834420148999999999974402
Q ss_pred EEECCCCCCCCCCCCCCCCCCC--CCCCCCC----CCCCCCCCCC-CCCHHHHHHHHHHHHCCCCC-CHHHHHCCHHHHH
Q ss_conf 0210344444434432100011--1222223----3223453211-11001233455432012221-0112100002688
Q gi|254780432|r 240 IMTIAKGMGGGFPIGACLATNE--VAACMNQ----GSHGSTYGGN-VLAMVLGEKVLNIIQSDGFL-ENVINIAKILFEG 311 (392)
Q Consensus 240 i~~~gK~l~gG~P~sav~~~~~--i~~~~~~----~~~~~T~~gn-pl~~aaa~a~L~~l~~~~l~-~~~~~~g~~l~~~ 311 (392)
.+++|-.=-+-..+|++++.++ +.+..+. ..-..||+|= -..+.|...-|+...+++.+ .|+.+. ++|-++
T Consensus 253 g~tmSaKKD~~vniGG~ia~~d~~l~~~~~~~~i~~EGf~TYGGlagRDmeAlA~GL~E~~de~yl~~Ri~qv-~yl~~~ 331 (459)
T PRK13237 253 GATMSGKKDCLVNIGGFLAMNDDELFQEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQDDYIRHRIGQV-RYLGEK 331 (459)
T ss_pred EEEEEECCCCCCCCCCEEEECCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHH-HHHHHH
T ss_conf 7999832025346556798577999999985511205875545622646999963437543679999889999-999999
Q ss_pred HHHHHHHCCCEEEEECCCEEEEEEE-E-------CCCHHHHH-HHHHHCCEEE-------EE----CC------CCEEEE
Q ss_conf 9999886797075504640099987-2-------49989999-9999689899-------62----68------988995
Q gi|254780432|r 312 LTAIKNRFPNMFLEVRGQGLLIGLK-T-------VFSPALLA-AKFRDECLLT-------AP----SS------DNVVRI 365 (392)
Q Consensus 312 L~~l~~~~~~~v~~vRG~Gl~~~ie-~-------~~~~~~~~-~~l~~~Gll~-------~~----~~------~~~irl 365 (392)
|.+. --+++..+-|.+.++--. + ..+...++ +...+-|+-. .+ .+ -+.+||
T Consensus 332 L~~~---GVPvv~P~GGHav~iDA~~fLPhip~~~fPa~aLa~~LY~~~GIR~~E~Gs~~~grdp~tg~~~~~~~ElvRL 408 (459)
T PRK13237 332 LLAA---GVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQALAAELYIDSGVRSMERGIVSAGRDPKTGENHYPKLELVRL 408 (459)
T ss_pred HHHC---CCCEECCCCCEEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCCCCCCCCEEEE
T ss_conf 9987---9970368985289974677568998033929999999999719346854010116688875656876333677
Q ss_pred CCC-CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 589-868899999999999999998
Q gi|254780432|r 366 LPP-LTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 366 ~Pp-l~it~~eid~~i~~l~~al~~ 389 (392)
+-| =+.|.+++|-+.+++.+...+
T Consensus 409 AiPRRvYT~sH~dyva~~l~~l~~~ 433 (459)
T PRK13237 409 TIPRRVYTYAHMDVVAESVIKLYKH 433 (459)
T ss_pred ECCCHHCCHHHHHHHHHHHHHHHHH
T ss_conf 2350203588999999999999964
No 278
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.60 E-value=3.8e-06 Score=60.67 Aligned_cols=290 Identities=18% Similarity=0.259 Sum_probs=178.2
Q ss_pred HHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999986520101333123-5655540356777665432001347860023435465654321234553211347999864
Q gi|254780432|r 77 EIFANHLIHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKI 155 (392)
Q Consensus 77 ~~la~~L~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~ 155 (392)
.+|.+.|++.+++|.|-+ -++|+..-=+.|-+.|+||..+|.+.|+.+|. -.|-||.--++-++.|-... .
T Consensus 112 ~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LI-P~SAHGTNPASAam~G~~VV-------~ 183 (496)
T COG1003 112 YELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLI-PDSAHGTNPASAAMAGFKVV-------V 183 (496)
T ss_pred HHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCCCCCCHHHHHHCCCEEE-------E
T ss_conf 999999997409762640678776415678999999999758877767983-16556898656765485599-------9
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC----CCCCCCCCCCCC
Q ss_conf 333222100268875410123322223-332222112462101232211022345721310110----034444555310
Q gi|254780432|r 156 EGFDQAKFCDLQSLKNQISNDTAAILI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV----QTGYGRTGKLFA 230 (392)
Q Consensus 156 ~~~~~~~~~d~~~l~~~~~~~iAavi~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV----~tG~GRtG~~f~ 230 (392)
-.....-.-|++.|+....+++||+.+ -| +.=|+.. +=.+.+.++..++|.++..|-- +.|.-|-|.| +
T Consensus 184 V~~~~~G~VDlddLk~k~~~~~AalMiTnP--sT~GvFE---~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~-G 257 (496)
T COG1003 184 VKCDENGNVDLDDLRAKAEDNLAALMITNP--STLGVFE---EDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDM-G 257 (496)
T ss_pred EECCCCCCCCHHHHHHHHCCCEEEEEECCC--CCCCCCH---HHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCC-C
T ss_conf 832898871699999874131158886168--6454504---519999999997299898447543525225566556-5
Q ss_pred CC--CCCCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCCC-------------------CCCCCCCCCCCCCHHHHHHH
Q ss_conf 11--12454530210344444434-4321000111222223-------------------32234532111100123345
Q gi|254780432|r 231 YE--WANVKPDIMTIAKGMGGGFP-IGACLATNEVAACMNQ-------------------GSHGSTYGGNVLAMVLGEKV 288 (392)
Q Consensus 231 ~e--~~gi~PDi~~~gK~l~gG~P-~sav~~~~~i~~~~~~-------------------~~~~~T~~gnpl~~aaa~a~ 288 (392)
++ |+++- =||.-.=|||=| .|-|.+++++...+.. ...++.|-||......+-+-
T Consensus 258 ~DV~HlNLH---KTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~Y 334 (496)
T COG1003 258 FDVVHLNLH---KTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAY 334 (496)
T ss_pred CCEEEEECC---CCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH
T ss_conf 635775223---11025888899987760258551233898733477753003678776422651455761689999999
Q ss_pred HHHHHCCCCCC---HHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC-----------HHHHHHHHHHCCEE
Q ss_conf 54320122210---11210000268899998867970755046400999872499-----------89999999968989
Q gi|254780432|r 289 LNIIQSDGFLE---NVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS-----------PALLAAKFRDECLL 354 (392)
Q Consensus 289 L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~-----------~~~~~~~l~~~Gll 354 (392)
|..|=.+.|.+ .+--..+++.++|+. .|+-. ..+.. ...=||+.+ ...+++++.+.|+.
T Consensus 335 I~~mG~~GL~~ase~AvLNANYia~rL~~---~y~~~---y~~~~-~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfH 407 (496)
T COG1003 335 IRMMGADGLKQASEVAVLNANYIARRLKG---YYPVP---YTGEN-RVAHECILDARPLKKETGVRALDVAKRLLDYGFH 407 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCC---CCCCC-CCEEEEEEECHHHHHHCCCCHHHHHHHHHHCCCC
T ss_conf 99875778889899999847999997540---27555---47887-6115899605666764298389999998725888
Q ss_pred E----EEC-CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9----626-89889955898688999999999999999985
Q gi|254780432|r 355 T----APS-SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 355 ~----~~~-~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
. .|. -..++-+-|.=+-+.++||++++++.+...+.
T Consensus 408 aPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea 448 (496)
T COG1003 408 APTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEA 448 (496)
T ss_pred CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 87465753356504535777768899999999999999998
No 279
>KOG0053 consensus
Probab=98.57 E-value=1.2e-06 Score=63.85 Aligned_cols=191 Identities=16% Similarity=0.243 Sum_probs=118.5
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101333123565554035677766543200134786002343546565432123455321134
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYL 148 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~ 148 (392)
....+|....+.+.+.+.-+...++...||--|..+|+..-. +....|+++...|+|.- --+. .+.
T Consensus 72 sr~~nPt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~--------~~g~~iV~~~~~Y~gT~-~~l~-----~~~ 137 (409)
T KOG0053 72 SRSGNPTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLL--------PAGDHIVATGDVYGGTL-RILR-----KFL 137 (409)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHC--------CCCCCEEEECCCCCCHH-HHHH-----HHH
T ss_conf 347899668999999987188638993440789999999846--------78985897178750099-9999-----999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 79998643332221002688754101233222233322221124621012322110223457213101100344445553
Q gi|254780432|r 149 EGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKL 228 (392)
Q Consensus 149 ~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~ 228 (392)
..++.. ...+.-.|++.+++.+.+++-+|++|..-.--. .. ++ +++++++|+++|+++|+|++..+.
T Consensus 138 ~~~gie---~~~vd~~~~~~~~~~i~~~t~~V~~ESPsNPll-~v-~D--I~~l~~la~~~g~~vvVDnTf~~p------ 204 (409)
T KOG0053 138 PKFGGE---GDFVDVDDLKKILKAIKENTKAVFLESPSNPLL-KV-PD--IEKLARLAHKYGFLVVVDNTFGSP------ 204 (409)
T ss_pred HHHCCE---EEEECHHHHHHHHHHHCCCCEEEEEECCCCCCC-CC-CC--HHHHHHHHHHCCCEEEEECCCCCC------
T ss_conf 970935---433041667889986266706999977999750-04-56--999999874179789995776763------
Q ss_pred CCCCCCCCCCCEEE--CCCCCCCCC-CCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 10111245453021--034444443-44321000--111222223322345321111001233
Q gi|254780432|r 229 FAYEWANVKPDIMT--IAKGMGGGF-PIGACLAT--NEVAACMNQGSHGSTYGGNVLAMVLGE 286 (392)
Q Consensus 229 f~~e~~gi~PDi~~--~gK~l~gG~-P~sav~~~--~~i~~~~~~~~~~~T~~gnpl~~aaa~ 286 (392)
.-++-+..=.||++ .-|-++|.- -++++++. .+....+......-=+.-||..|---.
T Consensus 205 ~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~ 267 (409)
T KOG0053 205 YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLS 267 (409)
T ss_pred CCCCHHHCCCCEEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 336712138878998510144477663514776174999999999999855799889999986
No 280
>KOG2862 consensus
Probab=98.57 E-value=2.8e-06 Score=61.52 Aligned_cols=300 Identities=17% Similarity=0.236 Sum_probs=163.5
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 74357878999999999999731450687578189999986520101333123565554035677766543200134786
Q gi|254780432|r 42 AVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNK 121 (392)
Q Consensus 42 ~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r 121 (392)
+..++||-||++.+.+.+-++.+-+ +.+....--+.+.-||+.+.|+|+- + .=.+|.
T Consensus 37 ~~~~lgh~sPe~~qIm~~v~egiky----------------VFkT~n~~tf~isgsGh~g~E~al~-----N--~lePgd 93 (385)
T KOG2862 37 SRPSLGHMSPEFVQIMDEVLEGIKY----------------VFKTANAQTFVISGSGHSGWEAALV-----N--LLEPGD 93 (385)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHH----------------HHCCCCCCEEEEECCCCCHHHHHHH-----H--HCCCCC
T ss_conf 6776566787899999999987899----------------8404789628983698416899887-----5--257897
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---HHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 002343546565432123455321134799986433322210---02688754101-23322223332222112462101
Q gi|254780432|r 122 FRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKF---CDLQSLKNQIS-NDTAAILIEPIQGEGGVRKVPEE 197 (392)
Q Consensus 122 ~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~---~d~~~l~~~~~-~~iAavi~Epv~g~~G~~~~~~~ 197 (392)
. |+++..+--|.-.+ +-..+ ++-..+-+ ..++ ..+|.+...++ .++-+|++--.-++-|+.. +
T Consensus 94 ~-vLv~~~G~wg~ra~------D~~~r--~ga~V~~v-~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q---~ 160 (385)
T KOG2862 94 N-VLVVSTGTWGQRAA------DCARR--YGAEVDVV-EADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQ---D 160 (385)
T ss_pred E-EEEEEECHHHHHHH------HHHHH--HCCEEEEE-ECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCC---H
T ss_conf 4-99997233777889------99986--08655587-15855675499999998715874599983476411115---5
Q ss_pred HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE--ECCCCCCC--CCCCCCCCCCCCCCCCCCC-----
Q ss_conf 23221102234572131011003444455531011124545302--10344444--4344321000111222223-----
Q gi|254780432|r 198 FLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM--TIAKGMGG--GFPIGACLATNEVAACMNQ----- 268 (392)
Q Consensus 198 ~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~--~~gK~l~g--G~P~sav~~~~~i~~~~~~----- 268 (392)
.+....++|++|+++|++|-|.+ + .|.-|.++.||| |+. .--|+|+. |+ |-+..+++-++.+..
T Consensus 161 ~~~~~g~lc~k~~~lllVD~VaS-l--ggt~F~mDewgV--DvaytgSQKaL~aP~GL--siisfS~ka~~~~~~rK~~~ 233 (385)
T KOG2862 161 LLAISGELCHKHEALLLVDTVAS-L--GGTEFEMDEWGV--DVAYTGSQKALGAPAGL--SIISFSDKALEAIRDRKTKP 233 (385)
T ss_pred HHHHHHHHHHCCCEEEEEECHHH-C--CCCCCEEHHHCC--CEEEECCHHHCCCCCCC--CEEECCHHHHHHHHHCCCCC
T ss_conf 78888787406781899720221-4--786411211065--07884243430799985--60323888999986145775
Q ss_pred --------------------CCCCCCCCCCCCCHH-HHHHHHHHHHCC---CCCCHHHHHCCHHHHHHHHHHHHCCCEEE
Q ss_conf --------------------322345321111001-233455432012---22101121000026889999886797075
Q gi|254780432|r 269 --------------------GSHGSTYGGNVLAMV-LGEKVLNIIQSD---GFLENVINIAKILFEGLTAIKNRFPNMFL 324 (392)
Q Consensus 269 --------------------~~~~~T~~gnpl~~a-aa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~v~ 324 (392)
..+.+| -|+... .-.++|+.|-++ +.+.|-+++++.++..|+++--+. ++.
T Consensus 234 ~~~yFd~~~~~~~wgc~~e~~~yhhT---~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~--fv~ 308 (385)
T KOG2862 234 VSFYFDILRLGNFWGCDGEPRAYHHT---PPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQL--FVV 308 (385)
T ss_pred EEEEEEHHHHCCHHCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--EEC
T ss_conf 48998677610320558863511168---8489999999999999998789999999999999999999848610--213
Q ss_pred E-ECCCEEEEE--EEECCCHHHHHHHHHHCCEE-E----EECCCCEEEECC-CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 5-046400999--87249989999999968989-9----626898899558-9868899999999999999998
Q gi|254780432|r 325 E-VRGQGLLIG--LKTVFSPALLAAKFRDECLL-T----APSSDNVVRILP-PLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 325 ~-vRG~Gl~~~--ie~~~~~~~~~~~l~~~Gll-~----~~~~~~~irl~P-pl~it~~eid~~i~~l~~al~~ 389 (392)
+ ---.-...+ +....+...+.+++.+++.+ + .+..+.++|+.- ..+-+.+-|+..++.+..++.+
T Consensus 309 ~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862 309 DEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred CHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 76452675025654777887999999987167786146677756289998751157728999999999999864
No 281
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.56 E-value=1.8e-06 Score=62.78 Aligned_cols=279 Identities=16% Similarity=0.209 Sum_probs=157.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87578189999986520101333123565554035677766543200134786002343546565432123455321134
Q gi|254780432|r 69 NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYL 148 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~ 148 (392)
.+..||....|.++++..-+.+.++.++||--|+.+++-.-. ++| +.|+..+..|.|.....-. ..
T Consensus 58 ~R~~nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll-------~~G-D~vl~~~~~YG~t~~~~~~------~l 123 (396)
T COG0626 58 SRTGNPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALL-------KAG-DHVLLPDDLYGGTYRLFEK------IL 123 (396)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHC-------CCC-CEEEECCCCCCHHHHHHHH------HH
T ss_conf 057896379999999986098837995373999999999835-------799-9898457764329999999------99
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf 79998643332221002688754101-23322223332222112462101232211022345721310110034444555
Q gi|254780432|r 149 EGFGPKIEGFDQAKFCDLQSLKNQIS-NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK 227 (392)
Q Consensus 149 ~~~~p~~~~~~~~~~~d~~~l~~~~~-~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~ 227 (392)
+.++- .+..+...+.++.++.+. +++-+|++|+.-.-- ...++ ++++.++++++|+++|+|.+... +.
T Consensus 124 ~~~gi---~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~-l~v~D---I~~i~~~A~~~g~~vvVDNTfat----P~ 192 (396)
T COG0626 124 QKFGV---EVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPL-LEVPD---IPAIARLAKAYGALVVVDNTFAT----PV 192 (396)
T ss_pred HHCCE---EEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCC-CCCCC---HHHHHHHHHHCCCEEEEECCCCC----CC
T ss_conf 85685---9999789975889987446683499996799963-05556---99999999864988999889662----20
Q ss_pred CCCCCCCCCCCCEEE--CCCCCCCCC-CCCC-CCCCC-CCCCCC--CCCC-CCCCCCCCCCCHHHHHHHHHHHH--CCCC
Q ss_conf 310111245453021--034444443-4432-10001-112222--2332-23453211110012334554320--1222
Q gi|254780432|r 228 LFAYEWANVKPDIMT--IAKGMGGGF-PIGA-CLATN-EVAACM--NQGS-HGSTYGGNVLAMVLGEKVLNIIQ--SDGF 297 (392)
Q Consensus 228 ~f~~e~~gi~PDi~~--~gK~l~gG~-P~sa-v~~~~-~i~~~~--~~~~-~~~T~~gnpl~~aaa~a~L~~l~--~~~l 297 (392)
-++-+..=.||++ .-|=|+|.- -+++ |++++ ++.+.+ .... .|..- .|..+--.+..|+-+. -+..
T Consensus 193 --~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l--~p~dA~l~lRGlkTL~~Rm~~~ 268 (396)
T COG0626 193 --LQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVL--SPFDAWLLLRGLRTLALRMERH 268 (396)
T ss_pred --CCCHHHHCCCEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHCCCHHHHHHHHH
T ss_conf --168555099789985433336773504168844868999999999886527878--8799999981715399999999
Q ss_pred CCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHHHHHHHCCEEE----
Q ss_conf 10112100002688999988679707550------------------46400999872499899999999689899----
Q gi|254780432|r 298 LENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLAAKFRDECLLT---- 355 (392)
Q Consensus 298 ~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~~~l~~~Gll~---- 355 (392)
.+|+.+ +.++.++||. |..| .|.|-|++|++... +...+.+..--++.
T Consensus 269 ~~nA~~--------IA~~L~~~p~-V~~V~yPgl~shp~he~~krq~~g~gg~~Sf~l~~~-~~~~~f~~~L~l~~~a~S 338 (396)
T COG0626 269 NENALK--------IAEFLADHPK-VKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-EAAKKFLDSLKLFKLAES 338 (396)
T ss_pred HHHHHH--------HHHHHHCCCC-EEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCH-HHHHHHHHHCCCCEEECC
T ss_conf 998999--------9999862997-689989999889768999974579860899996785-899999972782378326
Q ss_pred ---------EE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ---------62-----------------689889955898688999999999999999985
Q gi|254780432|r 356 ---------AP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 356 ---------~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
.| ..++.||++. --|+++++++-|++++.++
T Consensus 339 lGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSV----GlEd~eDLiaDl~~Al~~~ 395 (396)
T COG0626 339 LGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSV----GLEDVEDLIADLEQALAKA 395 (396)
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEE----CCCCHHHHHHHHHHHHHHH
T ss_conf 87744000166556755489878986599998289995----6799899999999999852
No 282
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.56 E-value=5.5e-06 Score=59.56 Aligned_cols=291 Identities=17% Similarity=0.264 Sum_probs=171.2
Q ss_pred HHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999986520101333123-5655540356777665432001347860023435465654321234553211347999864
Q gi|254780432|r 77 EIFANHLIHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKI 155 (392)
Q Consensus 77 ~~la~~L~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~ 155 (392)
.+|.+.|++.+|+|.|.+ -|||+..-=+.+...|+|+..+|...|+ |+-.-.|-||.--++-++.|-....-. .
T Consensus 546 ~~L~~~L~~iTG~~~vslQPnaGaqGE~aGl~~ir~yh~~~g~~~R~-icLIP~SAHGTNPASA~maG~~Vv~v~----~ 620 (954)
T PRK12566 546 DELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHESRGQSQRD-ICLIPASAHGTNPASAQMAGMRVVIVE----C 620 (954)
T ss_pred HHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-EEEEECCCCCCCHHHHHHCCCEEEEEE----C
T ss_conf 99999999866856042577877510689999999999974998883-799678988889778976696689960----1
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECC----CCCCCCCCCCCCCC
Q ss_conf 33322210026887541012332222333222211246210123221102234572131011----00344445553101
Q gi|254780432|r 156 EGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDE----VQTGYGRTGKLFAY 231 (392)
Q Consensus 156 ~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE----V~tG~GRtG~~f~~ 231 (392)
..--.+...|+++..+.+.+++||+.+ +..+.-|+... -.+.+.++..++|..+..|- -|.|+-|-|.+ +.
T Consensus 621 ~~~G~iD~~dL~~k~~~~~~~laa~Mi-TyPsT~GvfE~---~i~ei~~~vH~~GGqvY~DGANmNA~vG~~~Pg~~-G~ 695 (954)
T PRK12566 621 DNDGNVDLDDLKAKAAEAGDRLSCLMI-TYPSTHGVYEE---GIREICEVVHQHGGQVYMDGANLNAQVGLARPADI-GA 695 (954)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHH---HHHHHHHHHHHHCCEEEECCCCHHHHHCCCCCCCC-CC
T ss_conf 899984899999999972665443430-06764512255---59999999997098898546322324144572003-67
Q ss_pred C--CCCCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCCC-------------CCCCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 1--12454530210344444434-4321000111222223-------------322345321111001233455432012
Q gi|254780432|r 232 E--WANVKPDIMTIAKGMGGGFP-IGACLATNEVAACMNQ-------------GSHGSTYGGNVLAMVLGEKVLNIIQSD 295 (392)
Q Consensus 232 e--~~gi~PDi~~~gK~l~gG~P-~sav~~~~~i~~~~~~-------------~~~~~T~~gnpl~~aaa~a~L~~l~~~ 295 (392)
+ |.++- -||+-.=|||=| +|-+.+++.+...+.. +..+..+-||..-+..+.+-|..+- .
T Consensus 696 Dv~HlNLH---KTF~iPHGGGGPG~GPi~v~~hL~pfLP~~~~~~~~g~~~~~~~vs~a~~Gsa~il~is~~Yi~mmG-~ 771 (954)
T PRK12566 696 DVSHMNLH---KTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVPGPDPNNGAVSAAPWGSASILPISWMYIAMMG-P 771 (954)
T ss_pred CCEEEECH---HCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHC-H
T ss_conf 60232002---2036887888898776666423167589986346899887766255247784799999999999867-7
Q ss_pred CCCCHHHHH----CCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC-----------HHHHHHHHHHCCEEE----E
Q ss_conf 221011210----000268899998867970755046400999872499-----------899999999689899----6
Q gi|254780432|r 296 GFLENVINI----AKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS-----------PALLAAKFRDECLLT----A 356 (392)
Q Consensus 296 ~l~~~~~~~----g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~-----------~~~~~~~l~~~Gll~----~ 356 (392)
+ +.++.+. .+++.++|+. .||-.+ .|..-+.+=||..+ ...++++|.+-|... .
T Consensus 772 ~-L~~at~~AiLnANY~~~rL~~---~y~ily---~g~~g~~aHE~ild~r~~k~~~gi~~~DiAKrL~DyGfHaPTmsf 844 (954)
T PRK12566 772 Q-LADASEVAILSANYLANQLGG---AFPVLY---RGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSF 844 (954)
T ss_pred H-HHHHHHHHHHHHHHHHHHHCC---CCCCCC---CCCCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 7-999999999999999997304---486551---699998777898503553454299818998998657998983262
Q ss_pred ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 268988995589868899999999999999998
Q gi|254780432|r 357 PSSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 357 ~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
|.. .++-+-|.=.=+.++||++++++..--.|
T Consensus 845 PV~-gtlMiEPTESEsk~elDrF~dami~Ir~E 876 (954)
T PRK12566 845 PVP-GTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred CCC-CCEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 068-85560688889989999999999999999
No 283
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase; InterPro: IPR006234 These sequences represent O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis..
Probab=98.54 E-value=1.7e-06 Score=62.84 Aligned_cols=249 Identities=18% Similarity=0.222 Sum_probs=162.9
Q ss_pred HHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999731-4506875781899999865201013331235655540356777665432001347860023435465654
Q gi|254780432|r 56 ILKSQSEKL-WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGR 134 (392)
Q Consensus 56 a~~~q~~~~-~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~ 134 (392)
|-+.-..++ .++-.+|.||....|++||...-|+++++=+.||=-|+-+++- +.. +.|-. ||+ .+|--|.
T Consensus 35 A~~~FAge~~GfvYsRy~NPTv~~FE~Rla~LEGAe~A~AtAsGMsAi~A~l~-~L~------~AGDh-vv~-sRSlFGs 105 (386)
T TIGR01325 35 AAKRFAGEVPGFVYSRYANPTVKVFEERLALLEGAERAVATASGMSAILAALM-ALL------SAGDH-VVA-SRSLFGS 105 (386)
T ss_pred HHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HHH------CCCCE-EEE-EECHHCC
T ss_conf 99753676889666226986157889999974060378864213899999999-986------16877-998-5100032
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEE
Q ss_conf 32123455321134799986433322210026887541012332222333222211246210123221102234572131
Q gi|254780432|r 135 TLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLI 214 (392)
Q Consensus 135 t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI 214 (392)
|..-+ ..+...||- .+.+++..|+.++|....-+.=+|++|+=..-=+ ..- =++.|.||++.-|+++|
T Consensus 106 t~~~~-----~~~l~rFGv---~v~fv~~~Dl~~WeaA~~~nTkl~f~EtPSNPl~--e~~--Di~AlaELAHA~GA~lv 173 (386)
T TIGR01325 106 TVVLV-----SEILPRFGV---EVSFVDATDLKAWEAALKPNTKLVFVETPSNPLA--ELV--DIAALAELAHAVGALLV 173 (386)
T ss_pred EEEEE-----ECCCCCCCE---EEEECCCCCHHHHHHHCCCCCCEEEEECCCCHHH--HHH--HHHHHHHHHHHCCCEEE
T ss_conf 00210-----125343540---6751786787888985699950788636887046--799--99999998873341002
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCC-CCCCCC-CCCCCCCCCCCCC-CCCC--CCCCCCCCCCCHHHHHH
Q ss_conf 011003444455531011124545302103--444-444344-3210001112222-2332--23453211110012334
Q gi|254780432|r 215 FDEVQTGYGRTGKLFAYEWANVKPDIMTIA--KGM-GGGFPI-GACLATNEVAACM-NQGS--HGSTYGGNVLAMVLGEK 287 (392)
Q Consensus 215 ~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g--K~l-~gG~P~-sav~~~~~i~~~~-~~~~--~~~T~~gnpl~~aaa~a 287 (392)
+|-|.+ +.-.+|-+.+=.|+++.| |.| |-|=-+ |++++++|+|+.+ .... .|-|. +|+....-++
T Consensus 174 vDN~f~------tP~~qqPL~lGaDvvv~SATK~IDGqGRvlGGv~~G~~e~~~~~v~~~lr~~Gpal--SpFNAW~lLk 245 (386)
T TIGR01325 174 VDNVFA------TPVLQQPLKLGADVVVYSATKHIDGQGRVLGGVILGSEELMEEFVAKFLRHTGPAL--SPFNAWVLLK 245 (386)
T ss_pred EHHHHH------HHHHCCCCCCCCEEEEECCCEEECCCCCEECCEEECCHHHHHHHHHHHHHCCCCCC--CHHHHHHHHH
T ss_conf 114564------10013886456407986462011387540121453607775348999974257432--3678999850
Q ss_pred HHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCC
Q ss_conf 554320122210112100002688999988679707550------------------46400999872499
Q gi|254780432|r 288 VLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFS 340 (392)
Q Consensus 288 ~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~ 340 (392)
-||-|. = |+++-.+- -.+|.++.++||. |..| .|-|..+++++...
T Consensus 246 GlETL~-l----R~~~~~~s-Al~lA~~L~~~p~-v~~V~Y~~lP~HPq~~lar~Q~~GGG~Vv~f~l~~~ 309 (386)
T TIGR01325 246 GLETLS-L----RVQKQADS-ALALAEWLEEQPK-VQAVYYPGLPDHPQHELARRQQSGGGTVVAFDLKGG 309 (386)
T ss_pred HHHHHH-H----HHHHHHHH-HHHHHHHHHHCCC-EEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCC
T ss_conf 345789-9----99861478-9999999970895-579875878788526899984189967999732686
No 284
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.54 E-value=3.3e-06 Score=61.07 Aligned_cols=292 Identities=17% Similarity=0.247 Sum_probs=174.7
Q ss_pred HHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999986520101333123-5655540356777665432001347860023435465654321234553211347999864
Q gi|254780432|r 77 EIFANHLIHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKI 155 (392)
Q Consensus 77 ~~la~~L~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~ 155 (392)
.+|.+.|++.+|+|.|.+ -|||+-.-=+.|.+.|+|+..+|...|+.++ .-.+-||.--++-.+.|-....- ..
T Consensus 545 ~~l~~~L~~itG~~~vSlQPnaGaqGE~aGll~Ir~Yh~~~g~~~R~i~L-iP~SAHGTNpASA~maG~kVv~v----~~ 619 (955)
T PRK05367 545 ADLEAWLAEITGYDAVSLQPNAGSQGEYAGLLAIRAYHESRGEGHRNICL-IPSSAHGTNPASAQMAGMKVVVV----AC 619 (955)
T ss_pred HHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE-EECCCCCCCHHHHHHCCCEEEEE----EE
T ss_conf 99999999976888674178865089999999999999975987786799-55667888866687649768997----30
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECC----CCCCCCCCCCCCC
Q ss_conf 333222100268875410123322223-33222211246210123221102234572131011----0034444555310
Q gi|254780432|r 156 EGFDQAKFCDLQSLKNQISNDTAAILI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDE----VQTGYGRTGKLFA 230 (392)
Q Consensus 156 ~~~~~~~~~d~~~l~~~~~~~iAavi~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE----V~tG~GRtG~~f~ 230 (392)
+.--.+...|+.+..+.+.+++||+.+ -| +.-|+... =.+.+.++..++|.++..|- -|.|+-|-|.+ +
T Consensus 620 d~~G~iD~~dL~~k~~~~~~~laa~MiTyP--sT~GvFE~---~I~ei~~~vH~~GGqvY~DGANmNA~vG~~~Pg~~-G 693 (955)
T PRK05367 620 DENGNIDLDDLRAKAEQHADNLAALMITYP--STHGVFEE---TIREICEIVHDHGGQVYLDGANMNAQVGLTRPGDI-G 693 (955)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCHH---HHHHHHHHHHHCCCEEEECCCCCCCEECCCCHHHC-C
T ss_conf 899996999999999986577678874477--64566067---79999999985499897546440030230258764-7
Q ss_pred CC--CCCCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCCCC------------CCCCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 11--12454530210344444434-43210001112222233------------22345321111001233455432012
Q gi|254780432|r 231 YE--WANVKPDIMTIAKGMGGGFP-IGACLATNEVAACMNQG------------SHGSTYGGNVLAMVLGEKVLNIIQSD 295 (392)
Q Consensus 231 ~e--~~gi~PDi~~~gK~l~gG~P-~sav~~~~~i~~~~~~~------------~~~~T~~gnpl~~aaa~a~L~~l~~~ 295 (392)
++ |+++- =||+-.=|||=| +|.+.+++.+...+..- ..+++.-||...+..+.+-|..+-.+
T Consensus 694 ~Dv~HlNLH---KTF~iPHGGGGPG~GPi~v~~hL~pfLP~~~~~~~~~~~~~g~vsaap~Gsa~il~is~~Yi~mmG~~ 770 (955)
T PRK05367 694 ADVSHLNLH---KTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVVGIGGETGIGAVSAAPFGSASILPISWMYIRMMGAE 770 (955)
T ss_pred CCHHEECCC---CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 203100133---22124678889885348898650223899855678886777650458777517889999999986677
Q ss_pred CCCC---HHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC-----------HHHHHHHHHHCCEEE----EE
Q ss_conf 2210---11210000268899998867970755046400999872499-----------899999999689899----62
Q gi|254780432|r 296 GFLE---NVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS-----------PALLAAKFRDECLLT----AP 357 (392)
Q Consensus 296 ~l~~---~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~-----------~~~~~~~l~~~Gll~----~~ 357 (392)
+|.+ .+--..+++.++|+. .||-.+ .|..-+.+=||..+ ...++++|.+-|... .|
T Consensus 771 GL~~at~~AiLnANYi~~rL~~---~y~ily---~g~~~~~aHE~ild~r~~k~~~gi~~~DiAKRL~DyGfHaPT~sfP 844 (955)
T PRK05367 771 GLKQATQVAILNANYIAKRLKD---HYPVLY---TGRNGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFP 844 (955)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC---CCCCCC---CCCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 8999999999999999987112---486634---5899967778863226643530998799999986669888744666
Q ss_pred CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 68988995589868899999999999999998
Q gi|254780432|r 358 SSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 358 ~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
.. .++-+-|.=.=+.++||++++++..--.|
T Consensus 845 V~-~tlMIEPTESEsk~elDrf~~ami~Ir~E 875 (955)
T PRK05367 845 VA-GTLMVEPTESESKAELDRFCDAMIAIRAE 875 (955)
T ss_pred CC-CCEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 78-84363677889989999999999999999
No 285
>TIGR01264 tyr_amTase_E tyrosine aminotransferase; InterPro: IPR005957 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate.; GO: 0004838 tyrosine transaminase activity, 0030170 pyridoxal phosphate binding, 0009072 aromatic amino acid family metabolic process.
Probab=98.52 E-value=6.7e-06 Score=59.03 Aligned_cols=313 Identities=19% Similarity=0.224 Sum_probs=173.2
Q ss_pred CCHHHHHHHHHHHHHCCCC---CCCCCCHHHHHHHHHHHH------H----CCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 8999999999999731450---687578189999986520------1----01333123565554035677766543200
Q gi|254780432|r 49 SHPELVAILKSQSEKLWHV---SNLYQSTQQEIFANHLIH------S----TFADRVFFTNSGAESVECAIKTARRYHYM 115 (392)
Q Consensus 49 ~~p~i~~a~~~q~~~~~~~---~~~~~~~~~~~la~~L~~------~----~~~~~v~f~~SGseA~e~Aiklar~~~~~ 115 (392)
..++..+||++.++.-.+- ++......+++.|+.-.. . .-+|.|.+|+++|.|.+.||...
T Consensus 50 ~~~~~~~a~~~~v~S~~ynGY~p~vG~~~Ar~aia~~y~~sfvhn~~~~~~~~a~~Vvl~SGCS~Al~~ai~a~------ 123 (415)
T TIGR01264 50 TSEEAMQAMKESVDSGKYNGYAPTVGALEAREAIAEYYRNSFVHNKRPDGSIEADDVVLCSGCSHALEMAIEAL------ 123 (415)
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHH------
T ss_conf 88899999998752566067720013488889999987631100236687201276477167027899999995------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-CCCCCCCCCCCC
Q ss_conf 1347860023435465654321234553211347999864333222100268875410123322223-332222112462
Q gi|254780432|r 116 AGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI-EPIQGEGGVRKV 194 (392)
Q Consensus 116 ~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~-Epv~g~~G~~~~ 194 (392)
...|. .|++=+-||==-...+-+.. - -.+.|.- +-.++-..-|++.|+..++|+++|+|+ -|--=-|++ .
T Consensus 124 -Ad~G~-nvLVP~PGFplY~Tlc~~~~-i--~~~~Y~~--d~~d~~w~~DL~~l~~LiDd~T~~l~vnNPSNPcGSv--F 194 (415)
T TIGR01264 124 -ADAGQ-NVLVPRPGFPLYETLCKALG-I--EVKLYNL--DLPDEDWEIDLKQLESLIDDKTKALIVNNPSNPCGSV--F 194 (415)
T ss_pred -CCCCC-EEECCCCCCCHHHHHHHHCC-C--CCCEECC--CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC--C
T ss_conf -37978-06307888720788640147-6--2000025--7987335664898863125674078883757788988--7
Q ss_pred CHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC-----CCCCCCCC-CCCCCEEE--CCCCCC-CCCCCCCCCCC------
Q ss_conf 10123221102234572131011003444455-----53101112-45453021--034444-44344321000------
Q gi|254780432|r 195 PEEFLQQLRKICDDIDALLIFDEVQTGYGRTG-----KLFAYEWA-NVKPDIMT--IAKGMG-GGFPIGACLAT------ 259 (392)
Q Consensus 195 ~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG-----~~f~~e~~-gi~PDi~~--~gK~l~-gG~P~sav~~~------ 259 (392)
.++=|+.|-++|.++-..+|+|||+-+|==.| +|.+--.+ --+|=+.| ++|-+= =|-=+|=++..
T Consensus 195 ~~~Hl~~l~a~A~~~~Lpi~ADEIY~~~VF~GkDPnatF~~lA~L~s~VP~~~cgG~AKr~lVPGWRLGWli~hd~~~~~ 274 (415)
T TIGR01264 195 RREHLEELLALAERLKLPIIADEIYGDMVFKGKDPNATFTPLASLSSKVPILSCGGLAKRWLVPGWRLGWLIIHDRKGVL 274 (415)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCC
T ss_conf 87889999999875387236642025651388678642202023779988687076320022476110247888788865
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC---CC----CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEE
Q ss_conf -11122222332234532111100123345543201---22----21011210000268899998867970755046400
Q gi|254780432|r 260 -NEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS---DG----FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGL 331 (392)
Q Consensus 260 -~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~----l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl 331 (392)
+|+.+.+...+. ---+- |..+.-+|..+.. ++ .+.-++....++.+.|++. +++ ..||-.|.
T Consensus 275 ~~e~~~GL~~ls~-~i~Gp----ntlvQGAl~~iL~~TPq~Yf~~~~~~l~~nA~~~y~~La~v----~Gl-~pv~P~Ga 344 (415)
T TIGR01264 275 RDEVKDGLKKLSQ-RILGP----NTLVQGALPEILLKTPQEYFDGTVSVLESNAMLVYEILAEV----PGL-RPVMPKGA 344 (415)
T ss_pred CHHHHHHHHHHHC-HHCCC----CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC----CCC-EEECCCCC
T ss_conf 0268899999723-00462----01144217988640655677899999874089999885106----886-11148875
Q ss_pred ---EEEEEEC-----CCHHHHH-HHHHHCCEEEEECC----CCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf ---9998724-----9989999-99996898996268----98899558986889999999999999999
Q gi|254780432|r 332 ---LIGLKTV-----FSPALLA-AKFRDECLLTAPSS----DNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 332 ---~~~ie~~-----~~~~~~~-~~l~~~Gll~~~~~----~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
|.+||.. +++..+. +.+.|+-+.+.|.. ++-+|+. +|...+.+.|++.||.+=+.
T Consensus 345 MY~m~~i~~e~F~e~k~Dv~F~~~L~~E~sV~cLPG~~F~~PGf~Rvv--~T~P~~~~~EA~~RI~eFC~ 412 (415)
T TIGR01264 345 MYMMVGIELEKFPEFKSDVEFVEKLVEEESVFCLPGSCFEYPGFFRVV--LTVPSSMMEEACSRIKEFCK 412 (415)
T ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEECCHHHHCCCCCEEEE--EECCHHHHHHHHHHHHHHHH
T ss_conf 587560020017772411799999851146304641644589958999--70780678999999999841
No 286
>PRK13238 tnaA tryptophanase; Provisional
Probab=98.52 E-value=3.5e-06 Score=60.85 Aligned_cols=325 Identities=17% Similarity=0.182 Sum_probs=164.7
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 997646410226743578789999999999997314506875-7818999998652010133312356555403567776
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLY-QSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKT 108 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~-~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aikl 108 (392)
....|||+..-.|+..+ +. +|...+...-..| .+.....|.+.+.+.+++..+..+--|--| |. +
T Consensus 43 s~dV~IDlLTDSGT~AM--Sd--------~Qwaamm~gDEsYAGs~sf~~l~~av~di~G~~~~iPtHQGRaA-E~---I 108 (461)
T PRK13238 43 SEDVFIDLLTDSGTGAM--SD--------RQWAAMMRGDEAYAGSRSYYRLEDAVKDIFGYEYTIPTHQGRAA-EQ---I 108 (461)
T ss_pred CCCEEEEEEECCCCCCC--CH--------HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCCHHH-HH---H
T ss_conf 46635764215881304--59--------99999984223431355499999999987298644545663779-99---9
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC----CCCCCCCCCCCCCCCCCC---HHHHHHHHHC----CCC
Q ss_conf 654320013478600234354656543-2123455321----134799986433322210---0268875410----123
Q gi|254780432|r 109 ARRYHYMAGKTNKFRIVTFEGAFHGRT-LATISAGGKL----QYLEGFGPKIEGFDQAKF---CDLQSLKNQI----SND 176 (392)
Q Consensus 109 ar~~~~~~g~t~r~~ii~~~~~yHG~t-~~a~s~s~~~----~~~~~~~p~~~~~~~~~~---~d~~~l~~~~----~~~ 176 (392)
-... .. ++|. +. -+.||=.| -+-+.+.|-. ...+.+.|. ...|| -|++.|++.+ .++
T Consensus 109 lf~~--l~-k~g~---~v-p~N~HFdTTrahie~~G~~~~dl~~~ea~d~~----~~~pFKGN~Dl~kLe~~i~~~g~~~ 177 (461)
T PRK13238 109 LFPV--LI-KKGD---VV-PSNYHFDTTRAHIELNGGTAVNLVIDEALDTG----SRYPFKGNFDLEKLEALIEEVGADN 177 (461)
T ss_pred HHHH--HC-CCCC---EE-CCCCCCCCCHHHHHHCCCEEEEEECHHHCCCC----CCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 9998--64-6997---85-78878565078888539867730544314957----6789788779999999998738446
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC--CCCCCC------CCCC---------CCC
Q ss_conf 32222333222211246210123221102234572131011003444455--531011------1245---------453
Q gi|254780432|r 177 TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG--KLFAYE------WANV---------KPD 239 (392)
Q Consensus 177 iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG--~~f~~e------~~gi---------~PD 239 (392)
|+.|+++---.++|-.|.+-+-++.++++|++||+++++|-. |.. .||-.+ .+.| -.|
T Consensus 178 I~~v~~tiTnN~~GGQPVSm~Nir~v~~la~~~~ip~~lDaa-----RfaENAyFIk~RE~gY~d~si~eI~rEmfs~aD 252 (461)
T PRK13238 178 IPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVLDAA-----RFAENAYFIKQREPGYKDKSIKEITREMFSYAD 252 (461)
T ss_pred CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHH-----HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 548999986268788164689999999999982995998656-----676645788732531257999999999984523
Q ss_pred EEECCCCCCCCC-CCCCCCCCCC---CCCCCCC----CCCCCCCCCCC-CCHHHHHHHHHHHHCCCCC-CHHHHHCCHHH
Q ss_conf 021034444443-4432100011---1222223----32234532111-1001233455432012221-01121000026
Q gi|254780432|r 240 IMTIAKGMGGGF-PIGACLATNE---VAACMNQ----GSHGSTYGGNV-LAMVLGEKVLNIIQSDGFL-ENVINIAKILF 309 (392)
Q Consensus 240 i~~~gK~l~gG~-P~sav~~~~~---i~~~~~~----~~~~~T~~gnp-l~~aaa~a~L~~l~~~~l~-~~~~~~g~~l~ 309 (392)
.+++|-.= .|+ .+|++++.++ +.+..+. ..-..||+|=. -.+.|...-|+...+++++ .|+.+. ++|-
T Consensus 253 g~tmSaKK-D~~vniGG~l~~~d~~~l~~~~~~~~i~~EGf~TYGGlaGRDmeAlAvGL~E~~d~dyl~~Ri~qv-~yLg 330 (461)
T PRK13238 253 GLTMSAKK-DAMVNIGGLLCFKDDSDLYTKCRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIAQV-EYLG 330 (461)
T ss_pred EEEEEECC-CCEECCCCEEEECCHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHH-HHHH
T ss_conf 79998330-121044228996675999999874424205875668833877999973578760779999779999-9999
Q ss_pred HHHHHHHHHCCCEEEEECCCEEEEEEE-E-------CCCHHHH-HHHHHHCCEEE-------E---EC-C------CCEE
Q ss_conf 889999886797075504640099987-2-------4998999-99999689899-------6---26-8------9889
Q gi|254780432|r 310 EGLTAIKNRFPNMFLEVRGQGLLIGLK-T-------VFSPALL-AAKFRDECLLT-------A---PS-S------DNVV 363 (392)
Q Consensus 310 ~~L~~l~~~~~~~v~~vRG~Gl~~~ie-~-------~~~~~~~-~~~l~~~Gll~-------~---~~-~------~~~i 363 (392)
++|.+. --+++..+-|.+.++--. + ..+...+ ++..++-|+-. . +. + -+.+
T Consensus 331 ~~L~~~---GVPvv~P~GGHAv~iDA~~fLPhip~~qfPa~aLa~eLY~~~GIR~vEiGs~~~grdp~tg~~~~~~~ELv 407 (461)
T PRK13238 331 EGLEEA---GVPVVTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRAVEIGSLLLGRDPDTGEQLPAPAELL 407 (461)
T ss_pred HHHHHC---CCCEECCCCCEEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCCCCCCCCCE
T ss_conf 999977---99705679851899746785679981448189999999997295578750012054888766578760000
Q ss_pred EECCC-CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 95589-868899999999999999998
Q gi|254780432|r 364 RILPP-LTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 364 rl~Pp-l~it~~eid~~i~~l~~al~~ 389 (392)
||+-| =+.|.+++|-+.+++.....+
T Consensus 408 RLAiPRRvYT~sH~dyva~~l~~l~~~ 434 (461)
T PRK13238 408 RLAIPRRVYTQSHMDYVAEALKWVKEN 434 (461)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 242450003588999999999999956
No 287
>pfam03841 SelA L-seryl-tRNA selenium transferase.
Probab=98.50 E-value=1.1e-06 Score=64.08 Aligned_cols=231 Identities=16% Similarity=0.194 Sum_probs=140.0
Q ss_pred HCCCCC--CHHHHHHHHHHHHHCCCCC----CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 357878--9999999999997314506----8757818999998652010133312356555403567776654320013
Q gi|254780432|r 44 NSLGHS--HPELVAILKSQSEKLWHVS----NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAG 117 (392)
Q Consensus 44 ~~lGh~--~p~i~~a~~~q~~~~~~~~----~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g 117 (392)
+|||-+ +|++.+++.+.+..+...- ..-.......+++.|++.++.+-++..|+-+-|+-.++.--
T Consensus 11 TnLGRa~l~~~a~~a~~~~~~~y~nLE~dl~~g~RG~R~~~~~~ll~~ltgaE~a~vVNnnAaAv~L~l~~l-------- 82 (367)
T pfam03841 11 TNLGRALLSEEAVEAAKEAARHYSNLEYDLESGKRGSRDSHLEELLCELTGAEDALVVNNNAAAVLLVLNTL-------- 82 (367)
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH--------
T ss_conf 678777899999999999861772036667417766357899999998639865999878389999999987--------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-CCC-CCCCCCCCCC
Q ss_conf 47860023435465654321234553211347999864333222100268875410123322223-332-2221124621
Q gi|254780432|r 118 KTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILI-EPI-QGEGGVRKVP 195 (392)
Q Consensus 118 ~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~-Epv-~g~~G~~~~~ 195 (392)
..+|..||++-.--. ..++.-+ |...+.-+-.+..+-...--.++.+++.+.++.|+++- -+- ..--|+..-+
T Consensus 83 a~g~evivSRGelVe--iGgsfRi---Pdim~~sGa~LvEVGtTNrT~l~DYe~AI~e~Ta~llkVH~SN~~i~GFt~~v 157 (367)
T pfam03841 83 AQGKEVIISRGELVE--IGGSFRI---PDIMKQSGARLVEVGTTNRTHLKDYEQAINENTALLMKVHTSNYRIQGFTKEV 157 (367)
T ss_pred HCCCCEEEECCEEEC--CCCCCCC---HHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCCCEECCCCCCC
T ss_conf 548905775554512--3875440---89999659789982566888989999870824618999942651223746779
Q ss_pred HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC------------CCCEEECC--CCCCCCCCCCCCCCCCC
Q ss_conf 01232211022345721310110034444555310111245------------45302103--44444434432100011
Q gi|254780432|r 196 EEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV------------KPDIMTIA--KGMGGGFPIGACLATNE 261 (392)
Q Consensus 196 ~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi------------~PDi~~~g--K~l~gG~P~sav~~~~~ 261 (392)
+ ++.+.++|++||+++|.|= | +|.+.-...+++ -+|+++|| |-|| |-..|-++++++
T Consensus 158 ~--~~el~~la~~~~ip~i~Dl-----G-SG~l~d~~~~gl~~Ep~v~~~l~~GaDlV~FSGDKLLG-GPQAGII~Gkk~ 228 (367)
T pfam03841 158 S--LAELVALGKEHGLPVYYDL-----G-SGSLVDLSQYGLPKEPTVQELLALGVDLVSFSGDKLLG-GPQAGIIVGKKE 228 (367)
T ss_pred C--HHHHHHHHHHCCCCEEEEC-----C-CCCEECCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCC-CCCCCEEEECHH
T ss_conf 9--9999999987699679975-----8-66311220017999998999997399889986764568-985324764599
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 12222233223453211110012334554320122
Q gi|254780432|r 262 VAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDG 296 (392)
Q Consensus 262 i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~ 296 (392)
+.+.++.....-++.-+.+..++-.++|+.+.+++
T Consensus 229 lI~~ikknPL~RAlRvDKltLaaLeatL~~Yl~~~ 263 (367)
T pfam03841 229 LIERLKKNPLKRALRVDKLTLAALEATLRLYLNPE 263 (367)
T ss_pred HHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99974647444544458899999999999984900
No 288
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=98.48 E-value=2.1e-05 Score=55.80 Aligned_cols=272 Identities=20% Similarity=0.150 Sum_probs=133.8
Q ss_pred CCHHHHHHHHH----HHHHCCCC--C--CCCCCCCCCCHHHHHHHHHHHHHCCC------CCCCCCCCCCCCCCCCCCCC
Q ss_conf 78189999986----52010133--3--12356555403567776654320013------47860023435465654321
Q gi|254780432|r 72 QSTQQEIFANH----LIHSTFAD--R--VFFTNSGAESVECAIKTARRYHYMAG------KTNKFRIVTFEGAFHGRTLA 137 (392)
Q Consensus 72 ~~~~~~~la~~----L~~~~~~~--~--v~f~~SGseA~e~Aiklar~~~~~~g------~t~r~~ii~~~~~yHG~t~~ 137 (392)
.+|...++++. |.+..+++ . =.|+++|||||-.|+..||.+..... ...|..|+.-+. -|=...-
T Consensus 32 ~sP~~t~lE~~vi~wl~~l~g~p~~~~~G~~tsGgs~anl~al~~AR~~~~~~~~~~~~~~~~~~~v~~s~~-aH~Sv~K 110 (345)
T cd06450 32 ESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQ-AHVSVEK 110 (345)
T ss_pred HCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC-CCHHHHH
T ss_conf 485899999999999999838997788769827568999999999999998888741677888769998897-5289999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC------CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 2345532113479998643332221002688754101233------2222333222211246210123221102234572
Q gi|254780432|r 138 TISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDT------AAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDA 211 (392)
Q Consensus 138 a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~i------Aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~ 211 (392)
+..+-|..-.+- | ++..-.-|.+.|++.+.++. .+|+.---...-|.+=| +++|.++|++||+
T Consensus 111 Aa~ilg~~~~~v---p----~d~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD~----l~~i~~i~~~~~i 179 (345)
T cd06450 111 AAAYLDVKVRLV---P----VDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLAEKYDL 179 (345)
T ss_pred HHHHCCCCEEEE---E----CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC----HHHHHHHHHHCCC
T ss_conf 999748976997---5----3999808899999999999866997389995578767625678----9999999998499
Q ss_pred EEEECCCCCCCCCCCCCCCCC----CCCC-CCCEEE--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 131011003444455531011----1245-453021--034444443443210001112222233223453211110012
Q gi|254780432|r 212 LLIFDEVQTGYGRTGKLFAYE----WANV-KPDIMT--IAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVL 284 (392)
Q Consensus 212 llI~DEV~tG~GRtG~~f~~e----~~gi-~PDi~~--~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aa 284 (392)
.+-+|=-.-|+- .+.-+ ..|+ ..|-++ .-|-+.--++.|+++.| ..-
T Consensus 180 wlHVDaA~GG~~----~~~~~~~~~~~gie~aDSit~d~HK~l~~p~~~~~~l~r----------------------alk 233 (345)
T cd06450 180 WLHVDAAYGGFL----LPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR----------------------ALK 233 (345)
T ss_pred CEEEECHHCCHH----HCCCCCCHHHCCCCCCCEEEECCHHCCCCCCCCEEEEHH----------------------HHH
T ss_conf 477510001201----106220076579999888998812224878882688618----------------------889
Q ss_pred HHHHHHHHHCCCCCC---HHHHHCCHHHHHHHHHHHHCCCEEEEECCCE-EEEEEEECCC------HHHHHHHHHHCC-E
Q ss_conf 334554320122210---1121000026889999886797075504640-0999872499------899999999689-8
Q gi|254780432|r 285 GEKVLNIIQSDGFLE---NVINIAKILFEGLTAIKNRFPNMFLEVRGQG-LLIGLKTVFS------PALLAAKFRDEC-L 353 (392)
Q Consensus 285 a~a~L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G-l~~~ie~~~~------~~~~~~~l~~~G-l 353 (392)
.-.+|..+=.+.+.+ +.-++.++|.+.++ ++|.+ .-+-..- .+.++-...+ ...+.+++.+.| .
T Consensus 234 lw~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~----~~~~~-el~~~p~l~iV~Fr~~~~~~~d~~~~~l~~~l~~~g~~ 308 (345)
T cd06450 234 LWATLRRFGRDGYGEHIDRIVDLAKYLAELIR----ADPGF-ELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGW 308 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCE-EEECCCCEEEEEEEECCCHHCCHHHHHHHHHHHHCCCE
T ss_conf 99999999899999999999999999999996----29898-99669965899999768201148999999999813999
Q ss_pred EEEEC---CCCEEEECC-CCCCCHHHHHHHHHHHHHH
Q ss_conf 99626---898899558-9868899999999999999
Q gi|254780432|r 354 LTAPS---SDNVVRILP-PLTITAEEIHEGLERIERT 386 (392)
Q Consensus 354 l~~~~---~~~~irl~P-pl~it~~eid~~i~~l~~a 386 (392)
++.+. +...+|+.- .-..|+++||++++.|+++
T Consensus 309 ~vs~t~~~g~~~lR~~i~n~~tt~~di~~l~~~i~~a 345 (345)
T cd06450 309 HVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIERA 345 (345)
T ss_pred EEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf 9861599997899999799999999999999999749
No 289
>PRK06434 cystathionine gamma-lyase; Validated
Probab=98.47 E-value=3.3e-06 Score=61.05 Aligned_cols=278 Identities=18% Similarity=0.201 Sum_probs=154.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45068757818999998652010133312356555403567776654320013478600234354656543212345532
Q gi|254780432|r 65 WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 65 ~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
.+.-.+..||....|+++|++.-+.+.++.+.||--|+.+++--.- ++|. .||+-+..|.|.....-
T Consensus 55 ~y~YsR~gnPT~~~lE~~la~LEg~~~a~~~sSGmaAi~~~ll~ll-------~~Gd-hiv~~~~~Yg~T~~l~~----- 121 (384)
T PRK06434 55 PYIYTRWGNPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLI-------KKGK-RILSISDLYGQTFYFFN----- 121 (384)
T ss_pred CCEECCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHH-------CCCC-EEEEECCCCCCHHHHHH-----
T ss_conf 9225389886699999999998499809997689999999999961-------8999-89980798277799999-----
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 11347999864333222100268875410123322223332222112462101232211022345721310110034444
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
.....++- .+..++..+++.++ ....+.-.|++|..-.-. ...++ ++.+.++|+++++ |+|-+.+
T Consensus 122 -~~l~~~Gi---~v~~vd~~~~~~~~-~~~~~tklv~~Esp~NP~-l~v~D---i~aia~~A~~~~v--vVDNTfa---- 186 (384)
T PRK06434 122 -KVLKTLGI---HVDYIDTDRLNSLD-FDPSNYDLIYAESITNPT-LKVPD---IKNVSSFCHENDV--IVDATFA---- 186 (384)
T ss_pred -HHHHHCCC---EEEEECCCCHHHHH-HCCCCCEEEEEECCCCCC-CCCCC---HHHHHHHHCCCCE--EEECCCC----
T ss_conf -88875697---27995786578896-074686499998899987-63156---7999976415984--7754765----
Q ss_pred CCCCCCCCCCCCCCCEEE--CCCCCCCC-CCCCCCC-CC-CCCCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHH--CC
Q ss_conf 555310111245453021--03444444-3443210-00-11122222332--23453211110012334554320--12
Q gi|254780432|r 225 TGKLFAYEWANVKPDIMT--IAKGMGGG-FPIGACL-AT-NEVAACMNQGS--HGSTYGGNVLAMVLGEKVLNIIQ--SD 295 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~~--~gK~l~gG-~P~sav~-~~-~~i~~~~~~~~--~~~T~~gnpl~~aaa~a~L~~l~--~~ 295 (392)
| .+.+.-...=.||++ ..|-|+|- =-+++++ .+ +++.+.+.... .|.+- +|..|.-.+..|+-+. =+
T Consensus 187 t--P~~~~Pl~~GaDivihS~TKYi~GHsDvl~G~v~~~~~~~~~~l~~~~~~~G~~~--sP~~a~L~lrGL~TL~lRm~ 262 (384)
T PRK06434 187 S--PYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNP--DPIQAYLALRGLKTLGLRME 262 (384)
T ss_pred C--CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCC--CHHHHHHHHCCCCCHHHHHH
T ss_conf 2--0137831038987997035200688886686450588999999999986148989--86889999826763999999
Q ss_pred CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------CCCEEEEEEEECCCHHHHHHHHHHCC-EE--------
Q ss_conf 2210112100002688999988679707550------------46400999872499899999999689-89--------
Q gi|254780432|r 296 GFLENVINIAKILFEGLTAIKNRFPNMFLEV------------RGQGLLIGLKTVFSPALLAAKFRDEC-LL-------- 354 (392)
Q Consensus 296 ~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------RG~Gl~~~ie~~~~~~~~~~~l~~~G-ll-------- 354 (392)
.-.+|+.+ +.++.++||. |..| +|.|-|++|++... .. +.++.++- ++
T Consensus 263 r~~~nA~~--------vA~~L~~hp~-V~~V~yPgle~ak~~~~g~gg~~sf~l~~~-~~-a~~f~~~l~l~~~a~SlGg 331 (384)
T PRK06434 263 KHNKNGME--------LARFLRDSKK-ISNVYYPDTEIGKKVLRGFGGMLSFELRSM-ED-VHKFIRNLEIPMVAASLGG 331 (384)
T ss_pred HHHHHHHH--------HHHHHHHCCC-CCEECCCCHHHHHHHHCCCCCEEEEEECCH-HH-HHHHHHHCCCCEEECCCCC
T ss_conf 99999999--------9999980999-337748528999998378985589996889-99-9999984896866036676
Q ss_pred -----EEE-----------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -----962-----------------68988995589868899999999999999998
Q gi|254780432|r 355 -----TAP-----------------SSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 355 -----~~~-----------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
+.| ..++.||++. --|+++++++=|+++|.+
T Consensus 332 ~eSLi~~Pa~~th~~~~~e~r~~~Gi~~~liRlSV----GlEd~~DLi~Dl~qAL~k 384 (384)
T PRK06434 332 VESLITLPVETSHSSLSPEERERLGISDNLVRFSI----GIEDIDDLIKDIENALSK 384 (384)
T ss_pred CCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE----CCCCHHHHHHHHHHHHCC
T ss_conf 66021276223552189999996597929699992----319999999999998675
No 290
>PRK02769 histidine decarboxylase; Provisional
Probab=98.42 E-value=6.8e-06 Score=58.99 Aligned_cols=263 Identities=16% Similarity=0.158 Sum_probs=128.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 12356555403567776654320013478600234354656543212345532113479998643332221002688754
Q gi|254780432|r 92 VFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKN 171 (392)
Q Consensus 92 v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~ 171 (392)
=+++++|||+|-.|+.+||.+. +. .+|-+...=|=.-.=+..+-+-+... -|.. ..-.+ |.++|++
T Consensus 87 GyvTsGGTE~Nl~al~~ARe~~-----p~--~vl~~Se~aHYSi~Kaa~llgi~~~~---V~~~-~~G~m---d~~~L~~ 152 (380)
T PRK02769 87 GYITNGGTEGNLYGCYLARELF-----PD--GTLYYSKDTHYSVSKIARLLRIKSRV---ITSL-PNGEI---DYDDLIS 152 (380)
T ss_pred EEEECCHHHHHHHHHHHHHHHC-----CC--CEEEECCCCHHHHHHHHHHCCCCCEE---ECCC-CCCCC---CHHHHHH
T ss_conf 7990655499999999999867-----99--68996673227799999983998707---3679-99949---7999999
Q ss_pred HCC---CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC---EEEECCCCCCCCCCCCCCCCC--CCCC-C-CCEE
Q ss_conf 101---2332222333222211246210123221102234572---131011003444455531011--1245-4-5302
Q gi|254780432|r 172 QIS---NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDA---LLIFDEVQTGYGRTGKLFAYE--WANV-K-PDIM 241 (392)
Q Consensus 172 ~~~---~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~---llI~DEV~tG~GRtG~~f~~e--~~gi-~-PDi~ 241 (392)
.+. ++...|+.----..-|.+=+ ++++.++|++||+ .|-+|--.-||- -+|--. .++. . -|=+
T Consensus 153 ~i~~~~~~P~iv~at~GTT~~GaiD~----i~~i~~i~~~~g~~~~wlHvDaA~gG~~---lpf~~~~~~~~~~~~~dSi 225 (380)
T PRK02769 153 KIKENKNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSGMI---LPFVNNPPPFSFADGIDSI 225 (380)
T ss_pred HHHHCCCCCEEEEEECCCCCCCCCCC----HHHHHHHHHHCCCCCEEEEEECCCCCEE---EECCCCCCCCCCCCCCCEE
T ss_conf 99967998779999647988867189----9999999998299842798412023324---3326775457898888979
Q ss_pred ECC--CCCCCCCCCCCCCCCCCCCCCCCC-C----CCCCCCCCC--CCCHHHHHHHHHHHHCCCC---CCHHHHHCCHHH
Q ss_conf 103--444444344321000111222223-3----223453211--1100123345543201222---101121000026
Q gi|254780432|r 242 TIA--KGMGGGFPIGACLATNEVAACMNQ-G----SHGSTYGGN--VLAMVLGEKVLNIIQSDGF---LENVINIAKILF 309 (392)
Q Consensus 242 ~~g--K~l~gG~P~sav~~~~~i~~~~~~-~----~~~~T~~gn--pl~~aaa~a~L~~l~~~~l---~~~~~~~g~~l~ 309 (392)
++. |-++.-+|.|.++.+++..+.+.. . ....|.+|+ ..+.++.-++|+.+-.+++ .+++-++.+++.
T Consensus 226 s~d~HK~~~~p~~~gv~l~r~~~~~~~~~~~~Yi~s~d~TI~GSR~G~~~~~~W~~l~~lG~~Gy~~~v~~~~~~A~yl~ 305 (380)
T PRK02769 226 AISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAV 305 (380)
T ss_pred EECCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_conf 98773457887755999987256541143687037898224425766789999999998789889999999999999999
Q ss_pred HHHHHHHHHCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8899998867970755046400999872499899999999689899626898899558986889999999999999999
Q gi|254780432|r 310 EGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 310 ~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
++|++. .. ... |.- ....+-|..+++.+.++ --+......-.|.++|. +|.+.||.+++-|-..+.
T Consensus 306 ~~L~~~--Gi-~~~---~~P-~s~~Vvf~~p~e~i~~k----w~Ls~~~~~~HiVvMPh--Vt~e~iD~fl~DL~~~~~ 371 (380)
T PRK02769 306 DRLQAN--GI-PAW---RNP-NSITVVFPCPSERIWKK----WHLATSGNQAHIITMPH--HNKQQIDSLIDELIFDLK 371 (380)
T ss_pred HHHHHC--CC-CEE---ECC-CCEEEEECCCCHHHHHC----EEEECCCCEEEEEECCC--CCHHHHHHHHHHHHHHHC
T ss_conf 999872--98-747---078-85379962899888507----46721598269998999--999999999999999855
No 291
>KOG0256 consensus
Probab=98.27 E-value=7.3e-05 Score=52.24 Aligned_cols=289 Identities=18% Similarity=0.225 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHH------CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1899999865201------0133312356555403567776654320013478600234354656543212345532113
Q gi|254780432|r 74 TQQEIFANHLIHS------TFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQY 147 (392)
Q Consensus 74 ~~~~~la~~L~~~------~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~ 147 (392)
.-+.++|+-+-.. .-++++..++.++-|||+-+-+- ..+|-- .+.-..=|-|.. -+..+
T Consensus 125 ~frqa~A~Fm~~~r~~~v~fdP~r~Vv~~G~T~ane~l~fcL-------adpgda-fLvPtPyY~gfd-------rdl~~ 189 (471)
T KOG0256 125 SFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCL-------ADPGDA-FLVPTPYYPGFD-------RDLRW 189 (471)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHH-------CCCCCE-EEECCCCCCCCC-------CCCEE
T ss_conf 899999999999848987437656688557531667778762-------589851-035689987632-------20142
Q ss_pred CCCCCCCC-CCCCCCCC-HHHHHHHHHC------CCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 47999864-33322210-0268875410------123322223-332222112462101232211022345721310110
Q gi|254780432|r 148 LEGFGPKI-EGFDQAKF-CDLQSLKNQI------SNDTAAILI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV 218 (392)
Q Consensus 148 ~~~~~p~~-~~~~~~~~-~d~~~l~~~~------~~~iAavi~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV 218 (392)
+.++...+ .......| -+.+++|..+ .-+|-++|+ .| +.-=|. ..+++-|..+-..+.++++.+|.|||
T Consensus 190 rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNP-sNPLG~-~~~~e~L~~ll~Fa~~kniHvI~DEI 267 (471)
T KOG0256 190 RTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNP-SNPLGT-TLSPEELISLLNFASRKNIHVISDEI 267 (471)
T ss_pred ECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECC-CCCCCC-CCCHHHHHHHHHHHHHCCEEEEEEHH
T ss_conf 0383699998406788412299999999999981895248998279-997777-46999999999988645627986032
Q ss_pred CCC--CCCCCCCCCC-C--C-CCCCCCEE----ECCCCCCC-CCCCCCCCCCCC-CCCCCCCCCC---CCCCCCCCCC-H
Q ss_conf 034--4445553101-1--1-24545302----10344444-434432100011-1222223322---3453211110-0
Q gi|254780432|r 219 QTG--YGRTGKLFAY-E--W-ANVKPDIM----TIAKGMGG-GFPIGACLATNE-VAACMNQGSH---GSTYGGNVLA-M 282 (392)
Q Consensus 219 ~tG--~GRtG~~f~~-e--~-~gi~PDi~----~~gK~l~g-G~P~sav~~~~~-i~~~~~~~~~---~~T~~gnpl~-~ 282 (392)
.+| |+.. +|-.. + + -...||-+ -++|-+|= |+-+|++-..++ |.......+. .|.+.-+-++ +
T Consensus 268 ya~sVF~~~-~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYs~ne~VvsaA~kmssf~~vSs~tQ~~la~L 346 (471)
T KOG0256 268 YAGSVFDKS-EFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASL 346 (471)
T ss_pred HHHCCCCCC-CCEEHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 100203666-7137898752645687727999973355698863789998667389999998750368758999999998
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECC-------CH-HHHHHHHHHC-CE
Q ss_conf 123345543201222101121000026889999886797075504640099987249-------98-9999999968-98
Q gi|254780432|r 283 VLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVF-------SP-ALLAAKFRDE-CL 353 (392)
Q Consensus 283 aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~-------~~-~~~~~~l~~~-Gl 353 (392)
..-..-++.+.+++ .+|++...+++.++|+++ ++.---++.|++.=+++-. +. -.+-+++.++ +|
T Consensus 347 LSD~~f~~~yl~en-~~Rl~~rh~~~~~gLk~l-----gI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vkl 420 (471)
T KOG0256 347 LSDEEFTREYLREN-NKRLRIRHRYIVEGLKAL-----GIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKL 420 (471)
T ss_pred HCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHC-----CCCEEECCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 43088999999999-999999999997548764-----884030687069997667745757818899999999986063
Q ss_pred EEEECC--------CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 996268--------988995589868899999999999999998
Q gi|254780432|r 354 LTAPSS--------DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 354 l~~~~~--------~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
.+.|.. .=++.|+ ++.++.+.-++++|.+.+.+
T Consensus 421 nlSpG~s~~C~EpGWFRvcFA---n~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256 421 NLSPGSSCHCHEPGWFRVCFA---NMSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred CCCCCCCCEECCCCEEEEEEC---CCCHHHHHHHHHHHHHHHHH
T ss_conf 257997624368985899842---48877899999999999874
No 292
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=98.26 E-value=0.00018 Score=49.66 Aligned_cols=277 Identities=18% Similarity=0.190 Sum_probs=130.7
Q ss_pred HHHHCCCCCCCC-----CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC---C--CCCCCC--CCCCCCCCCCCCC
Q ss_conf 520101333123-----565554035677766543200134786002343546---5--654321--2345532113479
Q gi|254780432|r 83 LIHSTFADRVFF-----TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGA---F--HGRTLA--TISAGGKLQYLEG 150 (392)
Q Consensus 83 L~~~~~~~~v~f-----~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~---y--HG~t~~--a~s~s~~~~~~~~ 150 (392)
.++.++.+...| .-|||-||-++...-- ++| .+|+++.-. + ||.... .++.++..-...+
T Consensus 86 a~~lF~~~~~~wgaNVqp~SGs~AN~av~~all-------~pG-D~im~l~l~~GGHltHG~~~~~~~v~~sg~~~~~~~ 157 (450)
T PTZ00094 86 ALAAFNLDPEEWGVNVQPYSGSPANFAVYTALL-------QPH-DRIMGLDLPSGGHLTHGFYTAKKKVSATSIFFESLP 157 (450)
T ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH-------CCC-CEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 999838985436610576866999999999970-------799-979984356688655433467777540134555677
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC-CCCCCCCCCC
Q ss_conf 998643332221002688754101-23322223332222112462101232211022345721310110-0344445553
Q gi|254780432|r 151 FGPKIEGFDQAKFCDLQSLKNQIS-NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV-QTGYGRTGKL 228 (392)
Q Consensus 151 ~~p~~~~~~~~~~~d~~~l~~~~~-~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV-~tG~GRtG~~ 228 (392)
|+.... ..+ |.+.+++... .++--+|. |. -.++-+-+ ++++|++|++.|+.|++|=- ..|+=-.| .
T Consensus 158 Y~vd~~--~~I---Dyd~~~~~a~~~kPklIi~----G~-Say~r~id-~k~~reIad~vGA~l~~D~AHiaGLIAgg-~ 225 (450)
T PTZ00094 158 YQVNEE--GLI---DYDKLEKLAKAFRPKLIIA----GA-SAYPRDID-YKRFREICDSVGAYLMADIAHTSGLVAAG-V 225 (450)
T ss_pred ECCCCC--CCC---CHHHHHHHHHHHCCCEEEE----CC-CCCCCCCC-HHHHHHHHHHCCCEEEEECHHHHHHHCCC-C
T ss_conf 324648--974---8999999998619987998----88-25425438-79999999973998996314444432045-5
Q ss_pred CCCCCCCCCCCEEECC--CCCCCCCCCCCCCC-CC----CCCCCCCCCCCCCCCCCCCC-CHHHHH-HHHHHHHCC---C
Q ss_conf 1011124545302103--44444434432100-01----11222223322345321111-001233-455432012---2
Q gi|254780432|r 229 FAYEWANVKPDIMTIA--KGMGGGFPIGACLA-TN----EVAACMNQGSHGSTYGGNVL-AMVLGE-KVLNIIQSD---G 296 (392)
Q Consensus 229 f~~e~~gi~PDi~~~g--K~l~gG~P~sav~~-~~----~i~~~~~~~~~~~T~~gnpl-~~aaa~-a~L~~l~~~---~ 296 (392)
|-+- +. -.|++|.. |.|-| |=|+++. ++ ++.+.++..-.-.+ .|+|. -..||. .++....++ +
T Consensus 226 ~psP-~~-~ADvVT~TTHKTLrG--PrGGiIl~~k~~~~e~~~kId~aVFPg~-qggph~h~IAa~Ava~~Ea~~~efk~ 300 (450)
T PTZ00094 226 LPSP-FP-YADVVTTTTHKSLRG--PRSGMIFFRKKIRPDIESKINQAVFPGL-QGGPHFHQIAAIAVQLKEVCSPEWKE 300 (450)
T ss_pred CCCC-CC-CCEEEECCCCCCCCC--CCCEEEEECCCCHHHHHHHHCCCCCCCC-CCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_conf 7984-34-550475222234778--9842898446640899998545128854-46777879999999999975767999
Q ss_pred CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE-EEEEEEECC---CHHHHHHHHHHCCEEEE----EC-----CCCEE
Q ss_conf 2101121000026889999886797075504640-099987249---98999999996898996----26-----89889
Q gi|254780432|r 297 FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG-LLIGLKTVF---SPALLAAKFRDECLLTA----PS-----SDNVV 363 (392)
Q Consensus 297 l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G-l~~~ie~~~---~~~~~~~~l~~~Gll~~----~~-----~~~~i 363 (392)
+.+++-+..+.|.+.|.+. --.++. -|.- -++-+++.. +.....+.|-+-||.+. |. .+..|
T Consensus 301 Ya~qVv~NAkaLa~~L~~~---G~~vvs--ggTdnHlvlvDl~~~g~~G~~ae~~Le~~gI~~NkN~iP~D~~~~~~SGi 375 (450)
T PTZ00094 301 YAKQVVDNAKALAAELEKR---GFDLVT--GGTDNHLILWNLRPFGITGSKVEKLLDAVNISVNKNTIPGDKSALAPSGI 375 (450)
T ss_pred HHHHHHHHHHHHHHHHHHC---CCEEEE--CCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCEE
T ss_conf 9999999999999999978---996950--89976279997777899999999999874938747879999999998703
Q ss_pred EECCC-CC---CCHHHHHHHHHHHHHHHHH
Q ss_conf 95589-86---8899999999999999998
Q gi|254780432|r 364 RILPP-LT---ITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 364 rl~Pp-l~---it~~eid~~i~~l~~al~~ 389 (392)
|+.-| +| +.++|+.++.+.|.+++.-
T Consensus 376 RiGT~a~TtrGm~e~em~~ia~lI~~~i~~ 405 (450)
T PTZ00094 376 RLGTPALTSRGAVEEDFEFVADFLDRAVKL 405 (450)
T ss_pred ECCCHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 316778883899889999999999999999
No 293
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.24 E-value=6.9e-05 Score=52.39 Aligned_cols=209 Identities=16% Similarity=0.219 Sum_probs=117.9
Q ss_pred HHHHHHHHCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CCCCCCCC----C
Q ss_conf 2688754101233222233-3222211246210123221102234572131011003444455531-01112454----5
Q gi|254780432|r 165 DLQSLKNQISNDTAAILIE-PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AYEWANVK----P 238 (392)
Q Consensus 165 d~~~l~~~~~~~iAavi~E-pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~e~~gi~----P 238 (392)
|.+++ .+.++++|+++. |-.-.|. +..++-+.+|-+++++||+.+|+|-- .|-.| +.-+.+++ |
T Consensus 170 DF~~l--~i~e~~g~ic~SRPtNPTGN--VlTdeE~~kldalA~~~giPliIDnA------Yg~PFP~iifsd~~~~w~~ 239 (417)
T COG3977 170 DFEHL--HIGESTGAICVSRPTNPTGN--VLTDEELAKLDALARQHGIPLIIDNA------YGVPFPGIIFSDATPLWNE 239 (417)
T ss_pred CHHHH--CCCCCEEEEEECCCCCCCCC--CCCHHHHHHHHHHHHHCCCCEEEECC------CCCCCCCEECCCCCCCCCC
T ss_conf 78881--33676026996478898877--36488999899874223896797356------6799786200356415678
Q ss_pred CEE-ECCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHH--------CCH
Q ss_conf 302-1034444--44344321000111222223322345321111001233455432012221011210--------000
Q gi|254780432|r 239 DIM-TIAKGMG--GGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINI--------AKI 307 (392)
Q Consensus 239 Di~-~~gK~l~--gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~--------g~~ 307 (392)
.|+ |+|-+-- -|.-+|-+++.+++.+.+....-. -+-+|-.+-.|.++ +.+++.++..-+.+. -+.
T Consensus 240 NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~i--isLap~~~G~Aiaa-~mie~gdl~rlseqVIrPFY~~~~q~ 316 (417)
T COG3977 240 NIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGI--ISLAPGRMGPAIAA-EMIESGDLLRLSEQVIRPFYRNRVQT 316 (417)
T ss_pred CEEEEEEHHHCCCCCCEEEEEECCHHHHHHHHHCCCE--EEECCCCCCHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 7788831433489873035796269999999711453--53167875689999-88602428889998643888988999
Q ss_pred HHHHHHHHHHHCCCEEEEECCCEEEEE----EEECCCHHHHHHHHHHCCEEEEECC-------------CCEEEECCCCC
Q ss_conf 268899998867970755046400999----8724998999999996898996268-------------98899558986
Q gi|254780432|r 308 LFEGLTAIKNRFPNMFLEVRGQGLLIG----LKTVFSPALLAAKFRDECLLTAPSS-------------DNVVRILPPLT 370 (392)
Q Consensus 308 l~~~L~~l~~~~~~~v~~vRG~Gl~~~----ie~~~~~~~~~~~l~~~Gll~~~~~-------------~~~irl~Ppl~ 370 (392)
..+-|++-.-+++-. --++.|.++. -+++-+...+...+..+|+++.|.+ ..++|+. ++
T Consensus 317 ~~~~l~~~lp~~~~~--iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn--~~ 392 (417)
T COG3977 317 TIAILRRYLPEYRCL--IHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMN--YV 392 (417)
T ss_pred HHHHHHHHCCCCCEE--EECCCCCEEEHHHHCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCEEEEE--CC
T ss_conf 999999865776525--42687515413355358766899999998686899446324789998887612247875--36
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q ss_conf 88999999999999999985
Q gi|254780432|r 371 ITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 371 it~~eid~~i~~l~~al~~L 390 (392)
=+++.|.+.+.+|.+.+.+.
T Consensus 393 ~~~e~ie~Gva~lae~ve~~ 412 (417)
T COG3977 393 PEPEKIEKGVAILAEEVERA 412 (417)
T ss_pred CCHHHHHHHHHHHHHHHHHH
T ss_conf 98799999999999999999
No 294
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.15 E-value=0.00014 Score=50.47 Aligned_cols=316 Identities=21% Similarity=0.245 Sum_probs=167.5
Q ss_pred ECHHHHHHHCCCCCCHHHHH-HHHHHHHHC-CCCCC-CCCCHH-HHH------HHHHHHHHCCCC--CCCCCCCCCCCHH
Q ss_conf 41022674357878999999-999999731-45068-757818-999------998652010133--3123565554035
Q gi|254780432|r 36 DFASGIAVNSLGHSHPELVA-ILKSQSEKL-WHVSN-LYQSTQ-QEI------FANHLIHSTFAD--RVFFTNSGAESVE 103 (392)
Q Consensus 36 D~~~g~~~~~lGh~~p~i~~-a~~~q~~~~-~~~~~-~~~~~~-~~~------la~~L~~~~~~~--~v~f~~SGseA~e 103 (392)
++.|-+|.--.+|--|.+++ .+. ++. |++.+ -|+.+. +-. |-..+++.+++| .......+|-+-|
T Consensus 75 ~~~sfiG~GyY~~~~P~vI~rnil---e~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAE 151 (450)
T COG0403 75 VFTSFIGAGYYDTYTPPVILRNIL---ENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAE 151 (450)
T ss_pred HHHHHCCCCCCCCCCCHHHHHHHH---CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 145425686468718278888764---38542236788863666579999998999999985887445002316769999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 67776654320013478600234354656543212345532113479998643332221002688754101233222233
Q gi|254780432|r 104 CAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIE 183 (392)
Q Consensus 104 ~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~E 183 (392)
+++ ||++.+. .+|++|+. .+.-|=.|...+ ..+-++++ -.+...++.|++.++....+++++++++
T Consensus 152 Am~-ma~r~~k----~k~~~~~V-~~~vhpqt~~Vl-----~Tra~~~g---~~i~~~~~~d~~~l~~~~~~~~~gv~vQ 217 (450)
T COG0403 152 AML-MAKRVTK----KKRNKFLV-PKDVHPQTLDVL-----RTRAEGLG---IEIEVVDADDLDDLESADDGDVFGVLVQ 217 (450)
T ss_pred HHH-HHHHHHC----CCCCEEEE-CCCCCHHHHHHH-----HHHCCCCC---EEEEEECCCHHHHHHHCCCCCEEEEEEE
T ss_conf 999-9987414----76734996-688687799999-----86112576---3999956422556653246773799997
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEE--CCCCCCCCC-CCCCCCCCCCCCCCCEEE-----CCCCCCCCCC-CC
Q ss_conf 32222112462101232211022345721310--110034444-555310111245453021-----0344444434-43
Q gi|254780432|r 184 PIQGEGGVRKVPEEFLQQLRKICDDIDALLIF--DEVQTGYGR-TGKLFAYEWANVKPDIMT-----IAKGMGGGFP-IG 254 (392)
Q Consensus 184 pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~--DEV~tG~GR-tG~~f~~e~~gi~PDi~~-----~gK~l~gG~P-~s 254 (392)
---.. |... +=++.+.+.++++|+++|+ |=+.-|+=. -|+| | .||++ ||=.++=|=| ++
T Consensus 218 yP~~~-G~~~---~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~------G--ADIvvG~~QrfGvPmgfGGPhag 285 (450)
T COG0403 218 YPNTF-GIVE---EDLRALIEAAHSAGALVIVAADPLALGLLKPPGEF------G--ADIVVGSAQRFGVPMGFGGPHAG 285 (450)
T ss_pred CCCCC-CCCC---HHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCC------C--CCEEEECCCCCCCCCCCCCCCEE
T ss_conf 68887-7341---40999999986359779998263676455784103------7--86697337604777678875632
Q ss_pred CCCCCCCCCCCCCCCC-CCCCC--CC--------------------------C--CCCHHHHHHHHHHHHCCC---CCCH
Q ss_conf 2100011122222332-23453--21--------------------------1--110012334554320122---2101
Q gi|254780432|r 255 ACLATNEVAACMNQGS-HGSTY--GG--------------------------N--VLAMVLGEKVLNIIQSDG---FLEN 300 (392)
Q Consensus 255 av~~~~~i~~~~~~~~-~~~T~--~g--------------------------n--pl~~aaa~a~L~~l~~~~---l~~~ 300 (392)
.+.++++..-.. |+. .|-|- .| | -++.+|+.... ++=.++ +..+
T Consensus 286 ~fA~~~~~~R~m-PGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~-~hGp~GLk~iA~r 363 (450)
T COG0403 286 YFAVKDEFKRQM-PGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAV-YHGPQGLKEIAER 363 (450)
T ss_pred EEEEHHHHHHCC-CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HHCHHHHHHHHHH
T ss_conf 223758674259-98433046458998032012877888876400101554899999999999999-8696889999999
Q ss_pred HHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC---HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHH
Q ss_conf 1210000268899998867970755046400999872499---8999999996898996268988995589868899999
Q gi|254780432|r 301 VINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS---PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIH 377 (392)
Q Consensus 301 ~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~---~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid 377 (392)
+.++..++.++|+++.. ..++...-++.-+.+..+ ...+.++....|+.++......+-++--=+.|+++|+
T Consensus 364 ~~~~a~~la~~L~~~~~-----g~~~~~~~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~ 438 (450)
T COG0403 364 IHRLAAYLAAGLKEIGA-----GVELVFDHFFDTFTVRVPEEVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDID 438 (450)
T ss_pred HHHHHHHHHHHHHHCCC-----CEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCHHHHH
T ss_conf 99999999998764588-----6475142422048886463679999999985497414544881599951256789999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780432|r 378 EGLERIERTA 387 (392)
Q Consensus 378 ~~i~~l~~al 387 (392)
.+++.|....
T Consensus 439 ~l~~~~~~~~ 448 (450)
T COG0403 439 ALVAAFGGVN 448 (450)
T ss_pred HHHHHHHHHC
T ss_conf 9999975331
No 295
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=98.11 E-value=0.00051 Score=46.74 Aligned_cols=280 Identities=19% Similarity=0.199 Sum_probs=133.8
Q ss_pred HHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 520101333123-5655540356777665432001347860023435465654--3212345532113479998643332
Q gi|254780432|r 83 LIHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGR--TLATISAGGKLQYLEGFGPKIEGFD 159 (392)
Q Consensus 83 L~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~--t~~a~s~s~~~~~~~~~~p~~~~~~ 159 (392)
.++.++.+.+-. .-|||-||.++.. |.. .+| .+|+++.-..-|+ .....+.++..-....|+ ..+...
T Consensus 86 ak~LF~a~~anVqp~SGs~AN~av~~-all------~PG-D~im~l~l~~GGHltHG~~~~~sg~~~~~~~Y~-vd~~~~ 156 (422)
T PRK13034 86 AKQLFGADYANVQPHSGSQANGAVYL-ALL------KPG-DTILGMSLDAGGHLTHGAKVALSGKWFNAVQYG-VDRDTG 156 (422)
T ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHH-HHC------CCC-CEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEE-ECCCCC
T ss_conf 99984999635477861999999999-964------899-868843677776255788755345604789821-753238
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 22100268875410123322223332222112462101232211022345721310110-03444455531011124545
Q gi|254780432|r 160 QAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV-QTGYGRTGKLFAYEWANVKP 238 (392)
Q Consensus 160 ~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV-~tG~GRtG~~f~~e~~gi~P 238 (392)
.+.++.++.+.+.. ++--+|.-. -.++-+-+ ++++|++|++.|+.|++|=- .+|+=-.|.+ -.- +. -.
T Consensus 157 ~IDyd~l~~~a~~~--kPklIi~G~-----Say~r~id-~k~~reIAd~vGA~l~~D~AHiaGLIA~g~~-psP-~~-~A 225 (422)
T PRK13034 157 LIDYDQVERLAVEH--KPKLIIAGF-----SAYPRTLD-FARFRAIADSVGAILMVDMAHIAGLVAAGRH-PNP-VP-HA 225 (422)
T ss_pred CCCHHHHHHHHHHC--CCCEEEECC-----CCCCCCCC-HHHHHHHHHHHCCEEEECHHHHHHHHCCCCC-CCC-CC-CC
T ss_conf 22799999998731--998699666-----12442128-8999999987297798115655454103336-998-77-75
Q ss_pred CEEECC--CCCCCCCCCCCCC-CC-CCCCCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHCCC---CCCHHHHHCCHHH
Q ss_conf 302103--4444443443210-00-1112222233223453211110--012334554320122---2101121000026
Q gi|254780432|r 239 DIMTIA--KGMGGGFPIGACL-AT-NEVAACMNQGSHGSTYGGNVLA--MVLGEKVLNIIQSDG---FLENVINIAKILF 309 (392)
Q Consensus 239 Di~~~g--K~l~gG~P~sav~-~~-~~i~~~~~~~~~~~T~~gnpl~--~aaa~a~L~~l~~~~---l~~~~~~~g~~l~ 309 (392)
|++|.. |.|.| |=|+++ .+ +++.+.++....-. ..|+|+- .||-..++....+++ +.+++-+..+.|.
T Consensus 226 DvvT~TTHKTLrG--PrGGiIl~~~~el~~kId~avFPg-~qggp~~h~iAa~Ava~~Ea~~~~f~~Ya~qVv~NAkaLa 302 (422)
T PRK13034 226 HVVTTTTHKTLRG--PRGGMILTNDEEIAKKINSAVFPG-LQGGPLMHVIAAKAVAFGEALEPGFKTYIDQVIANAQALA 302 (422)
T ss_pred EEEECCCCCCCCC--CCCCEEECCHHHHHHHHHCCCCCC-CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 2886775147789--884357526699999864333886-4567157789999999999668769999999999999999
Q ss_pred HHHHHHHHHCCCEEEEECCCE-EEEEEEEC---CCHHHHHHHHHHCCEEEE----ECC------CCEEEECCC-CC---C
Q ss_conf 889999886797075504640-09998724---998999999996898996----268------988995589-86---8
Q gi|254780432|r 310 EGLTAIKNRFPNMFLEVRGQG-LLIGLKTV---FSPALLAAKFRDECLLTA----PSS------DNVVRILPP-LT---I 371 (392)
Q Consensus 310 ~~L~~l~~~~~~~v~~vRG~G-l~~~ie~~---~~~~~~~~~l~~~Gll~~----~~~------~~~irl~Pp-l~---i 371 (392)
+.|.+. .+ .++.. |.- =++-+++. .+.....+.|-+-||.+. |.. .+.||+.-| +| +
T Consensus 303 ~~L~~~--G~-~vv~g--gTdnHlvlvDl~~~gi~G~~a~~~L~~~gI~~Nkn~iP~D~~~p~~~sGiRiGt~a~TtRG~ 377 (422)
T PRK13034 303 EVLKAR--GY-DLVTG--GTDNHLLLVDLRPKGLTGKQAEQALERAGITVNKNGIPFDPEKPFVTSGIRIGTPAGTTRGF 377 (422)
T ss_pred HHHHHC--CC-EECCC--CCCCCEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCC
T ss_conf 999978--98-04579--99876366535656775699999999839586678688999899889812667788983899
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999999999999985
Q gi|254780432|r 372 TAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 372 t~~eid~~i~~l~~al~~L 390 (392)
.++|+.++.+.|.++|..+
T Consensus 378 ~e~em~~ia~~I~~vl~~~ 396 (422)
T PRK13034 378 GAAEFREIAGWILDVLDAL 396 (422)
T ss_pred CHHHHHHHHHHHHHHHHHC
T ss_conf 8899999999999999734
No 296
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.09 E-value=0.00027 Score=48.48 Aligned_cols=333 Identities=17% Similarity=0.194 Sum_probs=170.7
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCCCCCCC--H--HH
Q ss_conf 997646410226743578789999999999997314506875-781899999865201013331235655540--3--56
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLY-QSTQQEIFANHLIHSTFADRVFFTNSGAES--V--EC 104 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~-~~~~~~~la~~L~~~~~~~~v~f~~SGseA--~--e~ 104 (392)
.+.-|||+..-.|+..+-. +|...+...--.| .+.....|++..-+..|++.+..+.-|--| + ..
T Consensus 44 Sedv~IDLLTDSGTgams~----------~qwaamm~GDEAYagsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i 113 (471)
T COG3033 44 SEDVFIDLLTDSGTGAMTD----------KQWAAMMRGDEAYAGSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPI 113 (471)
T ss_pred CCCEEEEEECCCCCCCCCH----------HHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
T ss_conf 5645788530588662538----------999988525354315533899999999861734651255773177788999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCH---HHHHHHHHC----CCC
Q ss_conf 77766543200134786002343546565432123455321134799986433-3222100---268875410----123
Q gi|254780432|r 105 AIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEG-FDQAKFC---DLQSLKNQI----SND 176 (392)
Q Consensus 105 Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~-~~~~~~~---d~~~l~~~~----~~~ 176 (392)
.+|.+.+. +| ++++.+++.|.-.|-+-....|... +.-+.|-.-+ -...||. |++.|++.+ +++
T Consensus 114 ~ik~~~~~------pg-~~~~~~sN~~FdTTr~h~~~ng~~~-~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~n 185 (471)
T COG3033 114 LIKKGEQE------PG-SKMVAFSNYHFDTTRGHIQINGATP-RNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADN 185 (471)
T ss_pred HHHHCCCC------CC-CCCCCCCCCEECCHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 84103206------77-4101234531202267787548702-1231665566455688778657999999998737145
Q ss_pred CCCCCCCCCC-CCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC------CCCCCCC---------CCE
Q ss_conf 3222233322-22112462101232211022345721310110034444555310------1112454---------530
Q gi|254780432|r 177 TAAILIEPIQ-GEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFA------YEWANVK---------PDI 240 (392)
Q Consensus 177 iAavi~Epv~-g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~------~e~~gi~---------PDi 240 (392)
|+ +|+-.|- .+.|-.|.+-+=++.++++|++|++.++.|-..+. --.+|- ++.|-|. .|-
T Consensus 186 vp-~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~Rfa---ENaYFIk~rE~gYrd~sI~~IarEm~sYaD~ 261 (471)
T COG3033 186 VP-YIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFA---ENAYFIKQREPGYRDWSIEEIAREMYSYADG 261 (471)
T ss_pred CC-EEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHH---HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 86-8999996266678712077699999999871995896445665---4202234247655546099999999865124
Q ss_pred EECCCCCCCCC-CCCCCCCCCC-----CCCCCCCC----CCCCCCCCCC-CCHHHHHHHHHHHHCCC-CCCHHHHHCCHH
Q ss_conf 21034444443-4432100011-----12222233----2234532111-10012334554320122-210112100002
Q gi|254780432|r 241 MTIAKGMGGGF-PIGACLATNE-----VAACMNQG----SHGSTYGGNV-LAMVLGEKVLNIIQSDG-FLENVINIAKIL 308 (392)
Q Consensus 241 ~~~gK~l~gG~-P~sav~~~~~-----i~~~~~~~----~~~~T~~gnp-l~~aaa~a~L~~l~~~~-l~~~~~~~g~~l 308 (392)
.++|-. --|+ ++|+++.-++ +....... .-..||+|=. -.+.|-..-|..-.+.+ +..|+.+. ++|
T Consensus 262 ~~mS~K-KD~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv-~YL 339 (471)
T COG3033 262 CTMSAK-KDGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQV-QYL 339 (471)
T ss_pred HEEECC-CCCEECCCCEEEECCCCHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH-HHH
T ss_conf 302025-452422465788647507789999876657512666657644232899997888742708999999999-999
Q ss_pred HHHHHHHHHHCCCEEEEECCCEEEEEE-EEC-------CCH-HHHHHHHHHCCEEE-------EECC----------CCE
Q ss_conf 688999988679707550464009998-724-------998-99999999689899-------6268----------988
Q gi|254780432|r 309 FEGLTAIKNRFPNMFLEVRGQGLLIGL-KTV-------FSP-ALLAAKFRDECLLT-------APSS----------DNV 362 (392)
Q Consensus 309 ~~~L~~l~~~~~~~v~~vRG~Gl~~~i-e~~-------~~~-~~~~~~l~~~Gll~-------~~~~----------~~~ 362 (392)
.++|++.- . .++..+-|.+.++-. ++- .+. ...++..++-|+-. .+.. -+.
T Consensus 340 ~~~l~~~G--V-pi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~el 416 (471)
T COG3033 340 ADGLEEAG--V-PIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAEL 416 (471)
T ss_pred HHHHHHCC--C-EEEECCCCCEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHHCEEEEEEECEECCCCCCCCCCCCCCHHE
T ss_conf 98888659--7-36852787169963456367788244847789999999838236642011115587764347871230
Q ss_pred EEECCC-CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 995589-868899999999999999998
Q gi|254780432|r 363 VRILPP-LTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 363 irl~Pp-l~it~~eid~~i~~l~~al~~ 389 (392)
+||+-| -+.|.+++|..++.+.+...+
T Consensus 417 vRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 417 VRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 4674351114566799999999999854
No 297
>KOG0257 consensus
Probab=98.08 E-value=2.3e-05 Score=55.51 Aligned_cols=262 Identities=18% Similarity=0.239 Sum_probs=138.2
Q ss_pred HHHHC-CCCCCH------HHHHHHHHHHHHC--CCCCCCCCCHH-HHHHHHHHHHH-----CCCCCCCCCCCCCCCHHHH
Q ss_conf 67435-787899------9999999999731--45068757818-99999865201-----0133312356555403567
Q gi|254780432|r 41 IAVNS-LGHSHP------ELVAILKSQSEKL--WHVSNLYQSTQ-QEIFANHLIHS-----TFADRVFFTNSGAESVECA 105 (392)
Q Consensus 41 ~~~~~-lGh~~p------~i~~a~~~q~~~~--~~~~~~~~~~~-~~~la~~L~~~-----~~~~~v~f~~SGseA~e~A 105 (392)
..+.+ ||.+-| .+.+++++.+... ......|..+. +..|++++.+. -+.+.|+.++...||.-.+
T Consensus 30 ~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~ 109 (420)
T KOG0257 30 HKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSA 109 (420)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHH
T ss_conf 27987466788899974899999998742530022346679467899999998887355557866579953823789999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 7766543200134786002343546565432123455321134799986433-322210026887541012332222333
Q gi|254780432|r 106 IKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEG-FDQAKFCDLQSLKNQISNDTAAILIEP 184 (392)
Q Consensus 106 iklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~-~~~~~~~d~~~l~~~~~~~iAavi~Ep 184 (392)
+-.- . .+| ..||.++..|---.-......+.+.+. +..|.--+ -......|.+.++..+.++.=++|+-.
T Consensus 110 ~~~l----~---~~G-DeVii~eP~fd~Y~~~~~maG~tpv~v-~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~nt 180 (420)
T KOG0257 110 LLGL----L---NPG-DEVIVFEPFFDCYIPQVVMAGGTPVFV-PLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNT 180 (420)
T ss_pred HHHH----C---CCC-CEEEEECCCCHHHHHHHHHCCCCCEEE-CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEC
T ss_conf 9987----1---899-879993575122456776448842440-565344665576666896999864367764799948
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC-CCCCCCCCCCCCE-------EECCCCCCC-CCCCCC
Q ss_conf 2222112462101232211022345721310110034444555-3101112454530-------210344444-434432
Q gi|254780432|r 185 IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK-LFAYEWANVKPDI-------MTIAKGMGG-GFPIGA 255 (392)
Q Consensus 185 v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~-~f~~e~~gi~PDi-------~~~gK~l~g-G~P~sa 255 (392)
=..--|- ..+++-|+.|.++|++||.++|.|||.-=+-=.|. +-.+ ..+ |+| --+||..+- |-=+|=
T Consensus 181 PhNPtGk-vfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~--asl-Pgm~ertitvgS~gKtf~~TGWrlGW 256 (420)
T KOG0257 181 PHNPTGK-VFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRI--ASL-PGMYERTITVGSFGKTFGVTGWRLGW 256 (420)
T ss_pred CCCCCCC-CCCHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCCCCEEE--ECC-CCHHHEEEEECCCCCEEEEEEEEEEE
T ss_conf 9998673-0579999999999987897999825747882178765146--227-76224478851452100003456534
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-CCC--CHHHHHHHHHHHHCC-------CCCCHHHHHCCHHHHHHHHH
Q ss_conf 1000111222223322345321-111--001233455432012-------22101121000026889999
Q gi|254780432|r 256 CLATNEVAACMNQGSHGSTYGG-NVL--AMVLGEKVLNIIQSD-------GFLENVINIAKILFEGLTAI 315 (392)
Q Consensus 256 v~~~~~i~~~~~~~~~~~T~~g-npl--~~aaa~a~L~~l~~~-------~l~~~~~~~g~~l~~~L~~l 315 (392)
+++.+.++....+...-..|.- .|+ ++++|.+.=.-+.+. ++..-.+++-+.+.+.|+++
T Consensus 257 ~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257 257 AIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred EECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6454876464787864552026807789999987400201687620689987999999999999999866
No 298
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=98.08 E-value=0.00072 Score=45.73 Aligned_cols=281 Identities=21% Similarity=0.267 Sum_probs=139.3
Q ss_pred HHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCC---CCCCCCCCCCCCCCCCCCCC
Q ss_conf 520101333123-5655540356777665432001347860023435465654-321---23455321134799986433
Q gi|254780432|r 83 LIHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGR-TLA---TISAGGKLQYLEGFGPKIEG 157 (392)
Q Consensus 83 L~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~-t~~---a~s~s~~~~~~~~~~p~~~~ 157 (392)
.++.++.+.+-. .-|||-||.++.. |. -++|- +|+++.-..-|+ |.+ ..+.+|......+|+....
T Consensus 74 ak~LF~a~~anVqp~SGs~AN~av~~-al------l~pGD-~il~l~l~~GGHltHg~~~~v~~~g~~~~~~~Y~vd~~- 144 (402)
T cd00378 74 AKKLFGAEYANVQPHSGSQANLAVYF-AL------LEPGD-TIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPE- 144 (402)
T ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHH-HH------HCCCC-EEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC-
T ss_conf 99983898747587873999999999-97------27999-89986643477756677877202135678896324556-
Q ss_pred CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCC
Q ss_conf 3222100268875410123322223332222112462101232211022345721310110-034444555310111245
Q gi|254780432|r 158 FDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV-QTGYGRTGKLFAYEWANV 236 (392)
Q Consensus 158 ~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV-~tG~GRtG~~f~~e~~gi 236 (392)
...+.+..++.+.+. .++--+|. |. -.++-+-+ ++++|++|++.|++|++|=- ..|+=-.|. |-.- +.
T Consensus 145 ~~~IDyd~~~~~a~~--~kPklIi~----G~-S~y~r~~d-~~~~reIad~vgA~l~~D~aHi~GLIA~g~-~p~P-l~- 213 (402)
T cd00378 145 TGLIDYDALEKMALE--FKPKLIVA----GA-SAYPRPID-FKRFREIADEVGAYLLVDMAHVAGLVAGGV-FPNP-LP- 213 (402)
T ss_pred CCCCCHHHHHHHHHH--CCCCEEEE----CC-CCCCCCCC-HHHHHHHHHHCCCEEEEEHHHHHHHEECCC-CCCC-CC-
T ss_conf 587189999999986--59969997----77-15656558-899999998709889855012344303565-7997-68-
Q ss_pred CCCEEECC--CCCCCCCCCCCCCCC-C-CCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHC---CCCCCHHHHHCCHH
Q ss_conf 45302103--444444344321000-1-112222233223453211110012334-5543201---22210112100002
Q gi|254780432|r 237 KPDIMTIA--KGMGGGFPIGACLAT-N-EVAACMNQGSHGSTYGGNVLAMVLGEK-VLNIIQS---DGFLENVINIAKIL 308 (392)
Q Consensus 237 ~PDi~~~g--K~l~gG~P~sav~~~-~-~i~~~~~~~~~~~T~~gnpl~~aaa~a-~L~~l~~---~~l~~~~~~~g~~l 308 (392)
-.|+++.+ |.|.| |=|+++.. + ++.+.++..-.-.+.+|+.....||++ ++....+ ..+.+++-+..+.|
T Consensus 214 ~ADvvt~tTHKTlrG--PrGGiIl~~~~~~~~kId~avfPg~qggph~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAkaL 291 (402)
T cd00378 214 GADVVTTTTHKTLRG--PRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKAL 291 (402)
T ss_pred CCEEEECCCCCCCCC--CCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_conf 765774464345789--984089954278998854650986446745667899999999986866899999999999999
Q ss_pred HHHHHHHHHHCCCEEEEECCCEEEEEEEEC---CCHHHHHHHHHHCCEEEE----EC------CCCEEEECCC-CC---C
Q ss_conf 688999988679707550464009998724---998999999996898996----26------8988995589-86---8
Q gi|254780432|r 309 FEGLTAIKNRFPNMFLEVRGQGLLIGLKTV---FSPALLAAKFRDECLLTA----PS------SDNVVRILPP-LT---I 371 (392)
Q Consensus 309 ~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~---~~~~~~~~~l~~~Gll~~----~~------~~~~irl~Pp-l~---i 371 (392)
.+.|.+. .+ .++..-...-+++ +++. .+.....+.|-+.||.+. |. .+..||+.-| +| +
T Consensus 292 A~~L~~~--G~-~vv~ggTd~H~vl-vd~~~~g~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGT~a~T~rG~ 367 (402)
T cd00378 292 AEALKER--GF-KVVSGGTDNHLVL-VDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGM 367 (402)
T ss_pred HHHHHHC--CC-EEECCCCCCCEEE-EECCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCC
T ss_conf 9999858--94-7974899887799-966645689999999999849087547488999999999761647789985899
Q ss_pred CHHHHHHHHHHHHHHHHH
Q ss_conf 899999999999999998
Q gi|254780432|r 372 TAEEIHEGLERIERTAIK 389 (392)
Q Consensus 372 t~~eid~~i~~l~~al~~ 389 (392)
.++|+.++.+.|.+++..
T Consensus 368 ~e~em~~ia~lI~~~l~~ 385 (402)
T cd00378 368 GEEEMEEIADFIARALKD 385 (402)
T ss_pred CHHHHHHHHHHHHHHHHC
T ss_conf 889999999999999817
No 299
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=98.05 E-value=0.00061 Score=46.20 Aligned_cols=278 Identities=19% Similarity=0.254 Sum_probs=135.5
Q ss_pred HHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCC-CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20101333123-5655540356777665432001347860023435465654-3212-3455321134799986433322
Q gi|254780432|r 84 IHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGR-TLAT-ISAGGKLQYLEGFGPKIEGFDQ 160 (392)
Q Consensus 84 ~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~-t~~a-~s~s~~~~~~~~~~p~~~~~~~ 160 (392)
.+.++.+.+-. .-|||-||.++...- -++| .+|+++.-..-|+ |.+. .+.++..-....| |..+....
T Consensus 81 ~~lF~a~~anVqp~SGs~AN~av~~al-------l~PG-D~im~l~l~~GGHltHg~~~~~~~~~~~~~~y-~~d~~~~~ 151 (415)
T PRK00011 81 KKLFGAEYANVQPHSGSQANAAVYFAL-------LKPG-DTILGMDLAHGGHLTHGSPVNFSGKLYNVVSY-GVDEETGL 151 (415)
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHH-------CCCC-CEEEECCCCCCCCCCCCCCCCCCCCEEEEEEE-EECCCCCC
T ss_conf 998389860567786399999999996-------2789-85876686667876578675544652478986-78643481
Q ss_pred CCCHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 2100268875410-123322223332222112462101232211022345721310110-03444455531011124545
Q gi|254780432|r 161 AKFCDLQSLKNQI-SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV-QTGYGRTGKLFAYEWANVKP 238 (392)
Q Consensus 161 ~~~~d~~~l~~~~-~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV-~tG~GRtG~~f~~e~~gi~P 238 (392)
+ |.+.+++.. ..++--+|.-. -.++-+-+ ++++|++|++.|+.|++|=- ..|+=-.|. |-.- +. -.
T Consensus 152 I---Dyd~~~~~a~~~kPklIi~G~-----S~y~r~~d-~~~~reIad~vgA~l~~D~aHi~GLIA~g~-~~~P-l~-~A 219 (415)
T PRK00011 152 I---DYDEVEKLALEHKPKLIIAGA-----SAYSRPID-FKKFREIADEVGAYLMVDMAHIAGLVAAGV-HPNP-VP-HA 219 (415)
T ss_pred C---CHHHHHHHHHHHCCCEEEECC-----CCCCCCCC-HHHHHHHHHHHCCEEEEEHHHHHHHHHCCC-CCCC-CC-CC
T ss_conf 6---799999999860998899646-----13533128-899999999709889945355666664333-7996-67-75
Q ss_pred CEEECC--CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHCC---CCCCHHHHHCCHHHHH
Q ss_conf 302103--44444434432-10001112222233223453211110012334-55432012---2210112100002688
Q gi|254780432|r 239 DIMTIA--KGMGGGFPIGA-CLATNEVAACMNQGSHGSTYGGNVLAMVLGEK-VLNIIQSD---GFLENVINIAKILFEG 311 (392)
Q Consensus 239 Di~~~g--K~l~gG~P~sa-v~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a-~L~~l~~~---~l~~~~~~~g~~l~~~ 311 (392)
|+++.+ |.|.| |=|+ ++.++++.+.++....-.+.+|+.+...||++ ++....++ ++.+++-+..+.|.+.
T Consensus 220 Dvvt~tTHKTlrG--PrGGiIl~~~e~~~kId~aVFPg~qggph~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAk~La~~ 297 (415)
T PRK00011 220 DVVTTTTHKTLRG--PRGGLILTNEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEA 297 (415)
T ss_pred EEEECCCCCCCCC--CCCEEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf 6885453346789--88607973406666654120753146804778999999999984741899999999999999999
Q ss_pred HHHHHHHCCCEEEEECCCE-EEEEEEEC---CCHHHHHHHHHHCCEEEE----ECC------CCEEEECCC-CC---CCH
Q ss_conf 9999886797075504640-09998724---998999999996898996----268------988995589-86---889
Q gi|254780432|r 312 LTAIKNRFPNMFLEVRGQG-LLIGLKTV---FSPALLAAKFRDECLLTA----PSS------DNVVRILPP-LT---ITA 373 (392)
Q Consensus 312 L~~l~~~~~~~v~~vRG~G-l~~~ie~~---~~~~~~~~~l~~~Gll~~----~~~------~~~irl~Pp-l~---it~ 373 (392)
|.+. .+ .++. -|.- =++-+++. .+.....+.|.+.||.+. |.. +..||+.-| +| +.+
T Consensus 298 L~~~--G~-~vv~--ggTdnHlvlvdl~~~g~~G~~a~~~Le~~gI~vNkn~iP~d~~~~~~~SGiRiGt~a~TtrG~~e 372 (415)
T PRK00011 298 LQER--GF-KVVS--GGTDNHLVLVDLRKKGLTGKDAEAALEEANITVNKNAIPFDPRSPFVTSGIRIGTPAITTRGFKE 372 (415)
T ss_pred HHHC--CC-EEEE--CCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCH
T ss_conf 9768--97-7971--79877447764564568899999999985908755879899999888860143678897489988
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998
Q gi|254780432|r 374 EEIHEGLERIERTAIK 389 (392)
Q Consensus 374 ~eid~~i~~l~~al~~ 389 (392)
+|+.++.+.|.+++..
T Consensus 373 ~em~~ia~~I~~~l~~ 388 (415)
T PRK00011 373 AEMEEIAELIADVLDN 388 (415)
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 9999999999999837
No 300
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=98.01 E-value=0.00011 Score=51.16 Aligned_cols=284 Identities=11% Similarity=0.133 Sum_probs=131.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHH-HHCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 145068757818999998652-0101333123565554-03567776654320013478600234354656543212345
Q gi|254780432|r 64 LWHVSNLYQSTQQEIFANHLI-HSTFADRVFFTNSGAE-SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISA 141 (392)
Q Consensus 64 ~~~~~~~~~~~~~~~la~~L~-~~~~~~~v~f~~SGse-A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~ 141 (392)
+...-+++.+.-...-|++++ +..+.++.+|...||. +|.+++..+ .++|. +|+.-++ -|=.-..++.+
T Consensus 55 ~~~lD~L~~p~g~I~eAq~~aA~~fga~~t~flvnGsT~g~~a~i~a~-------~~~Gd-~Vlv~RN-~HkSv~~al~l 125 (417)
T pfam01276 55 DVELGDLLDHSGPIKEAQKYAARVFGADKSYFVVNGTSGANKTVGMAV-------CTPGD-TVLIDRN-CHKSIHHALMM 125 (417)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH-------CCCCC-EEEEECC-CHHHHHHHHHH
T ss_conf 357778778763999999999998399936998468309999999974-------38999-8997164-18999999998
Q ss_pred CC-CCCCCCCCC-C--CCCCCC--CCCCHHHHHHHHHCCCCCC---CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE
Q ss_conf 53-211347999-8--643332--2210026887541012332---2223332222112462101232211022345721
Q gi|254780432|r 142 GG-KLQYLEGFG-P--KIEGFD--QAKFCDLQSLKNQISNDTA---AILIEPIQGEGGVRKVPEEFLQQLRKICDDIDAL 212 (392)
Q Consensus 142 s~-~~~~~~~~~-p--~~~~~~--~~~~~d~~~l~~~~~~~iA---avi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~l 212 (392)
+| .|.|..+-. + ...++. ......++...+..++.-+ ++|..|-. -|+..- ++.+.++|+++|+.
T Consensus 126 ~g~~Pvyl~p~~~~~gi~~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~PtY--~G~~~d----i~~i~~~~h~~~~~ 199 (417)
T pfam01276 126 SGATPVYLEPTRNAYGIIGGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGTY--DGTIYN----AKEIVDTLGHLSDY 199 (417)
T ss_pred CCCEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCC--CEEEEC----HHHHHHHHHHCCCE
T ss_conf 698589953642434661588825459999999998587656850899989998--706528----99999998633987
Q ss_pred EEECCCCCCCCCCCCCCCCCC-----CCCCCC-------EEE--CCCCCCCCCCCCCCC-CCCC-CCC--CCCCC-CCCC
Q ss_conf 310110034444555310111-----245453-------021--034444443443210-0011-122--22233-2234
Q gi|254780432|r 213 LIFDEVQTGYGRTGKLFAYEW-----ANVKPD-------IMT--IAKGMGGGFPIGACL-ATNE-VAA--CMNQG-SHGS 273 (392)
Q Consensus 213 lI~DEV~tG~GRtG~~f~~e~-----~gi~PD-------i~~--~gK~l~gG~P~sav~-~~~~-i~~--~~~~~-~~~~ 273 (392)
+++||- -|..|.|.. ...-.| |++ .=|.|+ ++.-++++ .+.+ ..+ .++.. ....
T Consensus 200 llvDEA------hGah~~F~plp~~a~~~gad~~~~~~~~vvqS~HKtL~-altQ~s~Lh~~~~~~~~~~~~~~~l~~~q 272 (417)
T pfam01276 200 ILFDSA------WVGYEQFIPIYADASPMGGDNVNDPGIIVTQSVHKLLA-AFSQASQIHKKDSHIVNHKRFNEAFMMHT 272 (417)
T ss_pred EEEECC------CCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEHHHCCC-CCCHHHHHHHCCCCCCCHHHHHHHHHHHC
T ss_conf 999788------75202468783346656788666772279861111354-30434321216787789999999999773
Q ss_pred CCCCCCC---CHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHC------CCEEEEEC------CC---E-----
Q ss_conf 5321111---001233455432012221011210000268899998867------97075504------64---0-----
Q gi|254780432|r 274 TYGGNVL---AMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRF------PNMFLEVR------GQ---G----- 330 (392)
Q Consensus 274 T~~gnpl---~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~------~~~v~~vR------G~---G----- 330 (392)
|.+-+=+ ++-+|.+-++-...+.+++++-+....++++++++..-. |+.+.... +. |
T Consensus 273 TTSPsY~lmASLD~ar~~m~~~~G~~l~~~~i~~a~~~R~~i~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~hg~~~~~ 352 (417)
T pfam01276 273 STSPFYPIVASLDVAAAMMEGNSGRRLWQESLERAIEFRKEIKTLNDGEFFRPWNPEIVDGKECWPFHPGEKWHGFEGYD 352 (417)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCC
T ss_conf 88748999999999999975355499999999999999999986457852203671004771010247653213555555
Q ss_pred ---E-----EEEE------------EECCCHHHHHHHHHHCCEEEEECCCCEEEECCCC
Q ss_conf ---0-----9998------------7249989999999968989962689889955898
Q gi|254780432|r 331 ---L-----LIGL------------KTVFSPALLAAKFRDECLLTAPSSDNVVRILPPL 369 (392)
Q Consensus 331 ---l-----~~~i------------e~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl 369 (392)
. =+.| +...+...+.+.|+++||.+--...+.|-|..++
T Consensus 353 ~~~~~lDptKltI~t~g~~~~g~~~~~GisG~~v~~~Lre~gI~~E~~d~~~vL~l~s~ 411 (417)
T pfam01276 353 DNQYFLDPIKLTILTPGIDETGEYEEFGVPATIVAKYLREHGIVPEKTDLNNILFLFTP 411 (417)
T ss_pred CCCCCCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHCCCEEEECCCCCEEEEECC
T ss_conf 55425778569998078687763332397799999999986988986688828999736
No 301
>pfam00464 SHMT Serine hydroxymethyltransferase.
Probab=97.93 E-value=0.0011 Score=44.59 Aligned_cols=275 Identities=17% Similarity=0.189 Sum_probs=130.1
Q ss_pred HHHHHH-HHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC--C-CC--CCCCCCCCCCCCCCCCCCC
Q ss_conf 999865-20101333123-5655540356777665432001347860023435--4-65--6543212345532113479
Q gi|254780432|r 78 IFANHL-IHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFE--G-AF--HGRTLATISAGGKLQYLEG 150 (392)
Q Consensus 78 ~la~~L-~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~--~-~y--HG~t~~a~s~s~~~~~~~~ 150 (392)
.++.++ .+.++.+.+-. .-|||-||.++..-- -++| .+|+++. . ++ ||. ..+.+|..-...+
T Consensus 69 ~la~~rak~lF~a~~anVqp~SGs~An~av~~al-------l~PG-D~il~l~l~~GGHltHg~---~~~~~g~~~~~~~ 137 (380)
T pfam00464 69 TLAQDRAKELFGLDGVNVQPLSGSQANLAVYTAL-------LNPG-DRIMGLDLPHGGHLTHGY---PVNFSGKFFESMP 137 (380)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH-------HCCC-CEEEECCCCCCCCCCCCC---CCCEECCEEEEEE
T ss_conf 9999999998399763517787699999999998-------3799-989953677775456798---6562011467787
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC-CCCCCCCCCC
Q ss_conf 998643332221002688754101-23322223332222112462101232211022345721310110-0344445553
Q gi|254780432|r 151 FGPKIEGFDQAKFCDLQSLKNQIS-NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV-QTGYGRTGKL 228 (392)
Q Consensus 151 ~~p~~~~~~~~~~~d~~~l~~~~~-~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV-~tG~GRtG~~ 228 (392)
|+ ..+....+ |.+.+++... .++--+|.-. -.++-+-+ ++++|++|++.|++|++|=- ..|+=-.|.
T Consensus 138 Y~-~d~~~~~I---D~d~l~~~a~~~kPklIi~G~-----Say~r~~d-~~~~reIad~vgA~l~~D~aH~~GLIA~g~- 206 (380)
T pfam00464 138 YG-VDPDTGLI---DYDQLEKNAKLFKPKLIVAGT-----SAYSRLID-YARFREIADEVGAYLMVDMAHIAGLVAAGV- 206 (380)
T ss_pred CC-CCCCCCCC---CHHHHHHHHHHCCCCEEEECC-----CCCCCCCC-HHHHHHHHHHCCCEEEEEHHHHHHHHHCCC-
T ss_conf 43-46454866---899999999970998899874-----00436448-899999997509889986377777774243-
Q ss_pred CCCCCCCCCCCEEECC--CCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHCC---CCC
Q ss_conf 1011124545302103--4444443443210001----11222223322345321111001233-455432012---221
Q gi|254780432|r 229 FAYEWANVKPDIMTIA--KGMGGGFPIGACLATN----EVAACMNQGSHGSTYGGNVLAMVLGE-KVLNIIQSD---GFL 298 (392)
Q Consensus 229 f~~e~~gi~PDi~~~g--K~l~gG~P~sav~~~~----~i~~~~~~~~~~~T~~gnpl~~aaa~-a~L~~l~~~---~l~ 298 (392)
|-. -+. -.|+++.+ |.|.| |=|+++.++ ++.+.++....-.+.+|......||+ .++....++ .+.
T Consensus 207 ~p~-Pl~-~ADvvt~tTHKTlrG--PrGGiIl~~~~~~e~~~kId~avFPg~qggp~~h~iAa~Aval~Ea~~~~f~~Ya 282 (380)
T pfam00464 207 IPS-PFP-YAHVVTTTTHKTLRG--PRGGMIFFREILYELEKKINSAVFPGLQGGPLNHVIAAKAVALKQALTPEFKVYQ 282 (380)
T ss_pred CCC-CCC-CCEEEECCCCCCCCC--CCCEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 799-546-665785354566789--9851798378379999997140488766770065799999999998485299999
Q ss_pred CHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE-EEEEEEEC---CCHHHHHHHHHHCCEEEEEC----------CCCEEE
Q ss_conf 01121000026889999886797075504640-09998724---99899999999689899626----------898899
Q gi|254780432|r 299 ENVINIAKILFEGLTAIKNRFPNMFLEVRGQG-LLIGLKTV---FSPALLAAKFRDECLLTAPS----------SDNVVR 364 (392)
Q Consensus 299 ~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G-l~~~ie~~---~~~~~~~~~l~~~Gll~~~~----------~~~~ir 364 (392)
+++-+..+.|.+.|.+. .+ .++.. |.- =++-+++. .+.....+.|.+.||.+... .++.||
T Consensus 283 ~qVv~NAk~La~~L~~~--G~-~vv~g--gTd~H~vlvdl~~~g~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiR 357 (380)
T pfam00464 283 QQVLKNAKALAEALKER--GY-KLVSG--GTDNHLVLVDLRPKGLDGKRAEKALERANITANKNTIPGDPKSPFVTSGLR 357 (380)
T ss_pred HHHHHHHHHHHHHHHHC--CC-EECCC--CCCCCEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCE
T ss_conf 99999999999999978--88-35779--998768999776669999999999997692878885989999998888426
Q ss_pred ECCC-CC---CCHHHHHHHHHHH
Q ss_conf 5589-86---8899999999999
Q gi|254780432|r 365 ILPP-LT---ITAEEIHEGLERI 383 (392)
Q Consensus 365 l~Pp-l~---it~~eid~~i~~l 383 (392)
+.-| +| +.++|+.++.+.|
T Consensus 358 iGt~~~T~rG~~e~em~~ia~~I 380 (380)
T pfam00464 358 LGTPALTSRGFGEADFEEVAGYI 380 (380)
T ss_pred ECCHHHHHCCCCHHHHHHHHHHC
T ss_conf 57778983899889999999659
No 302
>KOG2040 consensus
Probab=97.92 E-value=0.0025 Score=42.22 Aligned_cols=291 Identities=18% Similarity=0.236 Sum_probs=168.5
Q ss_pred HHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999986520101333123-5655540356777665432001347860023435465654321234553211347999864
Q gi|254780432|r 77 EIFANHLIHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKI 155 (392)
Q Consensus 77 ~~la~~L~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~ 155 (392)
.+|.+.||+.+|+|.+-| -|||+..-=+-++..|.|+..+|..-|. |.-.--+-||..-++-.+.|-... +.+ .
T Consensus 585 ~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRn-vClIPvSAHGTNPASA~Magmkvv--pV~--~ 659 (1001)
T KOG2040 585 TELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRN-VCLIPVSAHGTNPASAAMAGMKVV--PVG--C 659 (1001)
T ss_pred HHHHHHHHEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCE-EEEEEECCCCCCHHHHHHCCCEEE--EEE--C
T ss_conf 99987776320666134268987553112299999999854777651-689860246898466886498688--863--1
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECC----CCCCCCCCCCCCCC
Q ss_conf 33322210026887541012332222333222211246210123221102234572131011----00344445553101
Q gi|254780432|r 156 EGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDE----VQTGYGRTGKLFAY 231 (392)
Q Consensus 156 ~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE----V~tG~GRtG~~f~~ 231 (392)
..--.+...|+.+..+.+.++.||+.+ +..+.-|+..+. .+.+.++..+||.-+.+|- -|.|+-|-|.+-+-
T Consensus 660 ~~~G~id~~dLk~kaekh~~~Laa~Mv-TYPST~GvfE~~---i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaD 735 (1001)
T KOG2040 660 DANGNIDMVDLKAKAEKHKDNLAALMV-TYPSTHGVFEEG---IDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGAD 735 (1001)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHEEEE-ECCCCCCCCCCC---HHHHHHHHHHCCCEEEECCCCCCCEECCCCCCCCCCC
T ss_conf 578874599999999974652204678-546645665545---8999999986398788537775230253577656653
Q ss_pred -CCCCCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCC---------CC--CCCCCCCCCCCCHHH----HHHHHHHHHC
Q ss_conf -112454530210344444434-432100011122222---------33--223453211110012----3345543201
Q gi|254780432|r 232 -EWANVKPDIMTIAKGMGGGFP-IGACLATNEVAACMN---------QG--SHGSTYGGNVLAMVL----GEKVLNIIQS 294 (392)
Q Consensus 232 -e~~gi~PDi~~~gK~l~gG~P-~sav~~~~~i~~~~~---------~~--~~~~T~~gnpl~~aa----a~a~L~~l~~ 294 (392)
-|.++-- -.|+ .-|||=| ++-+.+++.+...+. +. .-..|-+..|.+.+. .-+.|+.|-.
T Consensus 736 V~HLNLHK-TFcI--PHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~ 812 (1001)
T KOG2040 736 VCHLNLHK-TFCI--PHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGS 812 (1001)
T ss_pred CCCCCCCC-EEEE--CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHCC
T ss_conf 10001340-3550--57898888775206654355379997457777778887660412677762220337999998643
Q ss_pred CCCCCH---HHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECC-----------CHHHHHHHHHHCCEEE----E
Q ss_conf 222101---121000026889999886797075504640099987249-----------9899999999689899----6
Q gi|254780432|r 295 DGFLEN---VINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVF-----------SPALLAAKFRDECLLT----A 356 (392)
Q Consensus 295 ~~l~~~---~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~-----------~~~~~~~~l~~~Gll~----~ 356 (392)
..|.+- +--..+++.++|+. .|+-++...+| +.+-||.. +...+++++.+-|... -
T Consensus 813 ~GL~~as~~AiLNaNYMakRLe~---hYkil~~~~~~---~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmsw 886 (1001)
T KOG2040 813 GGLKDASKIAILNANYMAKRLES---HYKILFRGENG---LVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSW 886 (1001)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH---CCCEEEECCCC---CEEEEEEEECHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf 56433568886512789998864---05214755776---4320001113422002697488899988752677875556
Q ss_pred ECCCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 268988995589868899999999999999
Q gi|254780432|r 357 PSSDNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 357 ~~~~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
|.. +++-+-|.=.=+.+|+|+++|++-.-
T Consensus 887 PV~-gtLMIEPTESE~k~ElDRfcdAliSI 915 (1001)
T KOG2040 887 PVA-GTLMIEPTESEDKAELDRFCDALISI 915 (1001)
T ss_pred CCC-CCEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 557-81573267644689999999999989
No 303
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=97.92 E-value=0.0025 Score=42.21 Aligned_cols=286 Identities=20% Similarity=0.269 Sum_probs=133.4
Q ss_pred HHHCCCCCCCC-CCCCCCCHHHHHHHHHH-----------------------HHHCCCCCCCCCCCCCCCCCCCC-CCC-
Q ss_conf 20101333123-56555403567776654-----------------------32001347860023435465654-321-
Q gi|254780432|r 84 IHSTFADRVFF-TNSGAESVECAIKTARR-----------------------YHYMAGKTNKFRIVTFEGAFHGR-TLA- 137 (392)
Q Consensus 84 ~~~~~~~~v~f-~~SGseA~e~Aiklar~-----------------------~~~~~g~t~r~~ii~~~~~yHG~-t~~- 137 (392)
++.++.+.+-. --|||.||-++..-... |+......+-++|++++=.--|+ |.|
T Consensus 107 k~LF~a~~aNVQP~SGs~AN~avy~All~~~v~~Pgl~~~g~~~~~~l~~~~~~~~~~~~g~d~imgl~L~~GGHLTHG~ 186 (493)
T PRK13580 107 RELFGAEHAYVQPHSGADANLVAFWAILAHKVEAPALSKLGAKTVNDLTEEEWEELRAELGNQRLLGMSLDSGGHLTHGF 186 (493)
T ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCC
T ss_conf 99838985032778760778999999860002486422334333232330122222024678868705888786633699
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH-HHHHHCCCCCCCCEEEEC
Q ss_conf 2345532113479998643332221002688754101233222233322221124621012-322110223457213101
Q gi|254780432|r 138 TISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEF-LQQLRKICDDIDALLIFD 216 (392)
Q Consensus 138 a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~-l~~l~~lc~~~g~llI~D 216 (392)
..++++..-....|+ ..+....+.|+.++.+..+...++ +|. |.-.+|..+ ++++|++|++-|+.|++|
T Consensus 187 ~~n~sg~~~~~~~Y~-vd~et~~IDyD~~~~~A~~~kPKl--II~-------G~SaYpr~idf~~freIAdeVGA~LmaD 256 (493)
T PRK13580 187 RPNISGKMFRQRSYG-VDPDTGLLDYDEIAALAREFKPLV--LVA-------GYSAYPRRVNFAKLREIADEVGAVLMVD 256 (493)
T ss_pred CCCCCCEEEEEEECC-CCCCCCCCCHHHHHHHHHHCCCCE--EEE-------CCCCCCCCCCHHHHHHHHHHCCCEEEEE
T ss_conf 656342268878753-663348408999999999749988--997-------7624656448799999999719789810
Q ss_pred CC-CCCCCCCCCCCCCCCCCC--CCCEE--ECCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCC--HHHHHHH
Q ss_conf 10-034444555310111245--45302--10344444434432-10001112222233223453211110--0123345
Q gi|254780432|r 217 EV-QTGYGRTGKLFAYEWANV--KPDIM--TIAKGMGGGFPIGA-CLATNEVAACMNQGSHGSTYGGNVLA--MVLGEKV 288 (392)
Q Consensus 217 EV-~tG~GRtG~~f~~e~~gi--~PDi~--~~gK~l~gG~P~sa-v~~~~~i~~~~~~~~~~~T~~gnpl~--~aaa~a~ 288 (392)
=- ..|+=-.|.+ - .+.+. -.|+| |.-|.|-| |=|+ ++.++++.+.++... -.+.+ .|+- .|+-..+
T Consensus 257 iAHiaGLVA~g~~-~-~h~sP~~~ADvVTtTTHKTLrG--PRGGiIl~~~e~~~~Id~av-Pg~QG-GP~~h~IAakAva 330 (493)
T PRK13580 257 MAHFAGLVAGKVF-T-GDEDPVPHADIVTTTTHKTLRG--PRGGLVLAKKEYAEAVDKGC-PLVLG-GPLPHVMAAKAVA 330 (493)
T ss_pred HHHHHHHHHCCCC-C-CCCCCCCCCCEEECCCCCCCCC--CCCCEEEECHHHHHHHCCCC-CCCCC-CHHHHHHHHHHHH
T ss_conf 5667677642545-6-8999513351575123445678--88506884647787651038-75468-7277699999999
Q ss_pred HHHHHCCC---CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE-EEEEEEECC---CHHHHHHHHHHCCEEEE----E
Q ss_conf 54320122---2101121000026889999886797075504640-099987249---98999999996898996----2
Q gi|254780432|r 289 LNIIQSDG---FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG-LLIGLKTVF---SPALLAAKFRDECLLTA----P 357 (392)
Q Consensus 289 L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G-l~~~ie~~~---~~~~~~~~l~~~Gll~~----~ 357 (392)
+....+++ +.+++-+..+.|.+.|.+. .+ .++.. |.- =++-+++.. +.......|-+-||.+. |
T Consensus 331 f~EA~~peFk~Y~~qVv~NAkaLA~~L~~~--G~-~vvsG--GTdnHlvLvDl~~~g~tG~~ae~~Le~~gI~vNKN~iP 405 (493)
T PRK13580 331 LAEARTPDFKKYAHRVVDNARALAEGFLKR--GA-RLVTG--GTDNHLLLIDVTSFGLTGRQAEDALLDVGIVTNRNSIP 405 (493)
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHC--CC-EEECC--CCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCC
T ss_conf 999727778999999999999999999988--99-48528--88877588856778998899999998779387168898
Q ss_pred C------CCCEEEECCC-CC---CCHHHHHHHHHHHHHHHHHH
Q ss_conf 6------8988995589-86---88999999999999999985
Q gi|254780432|r 358 S------SDNVVRILPP-LT---ITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 358 ~------~~~~irl~Pp-l~---it~~eid~~i~~l~~al~~L 390 (392)
. ....||+.-| +| +.++|+.++.+.|.+++...
T Consensus 406 ~D~~~p~~~SGIRiGtpa~TtRGm~e~em~~ia~~I~~~l~~~ 448 (493)
T PRK13580 406 SDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLRNT 448 (493)
T ss_pred CCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 9998898886411166667618999899999999999999552
No 304
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=97.87 E-value=0.00036 Score=47.74 Aligned_cols=289 Identities=16% Similarity=0.121 Sum_probs=138.7
Q ss_pred HHCCCCCCHHHHHHHHHHHHHCCCCC--CCCCCHHHHHHHHH----HHHHCCC-CC--CCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 43578789999999999997314506--87578189999986----5201013-33--1235655540356777665432
Q gi|254780432|r 43 VNSLGHSHPELVAILKSQSEKLWHVS--NLYQSTQQEIFANH----LIHSTFA-DR--VFFTNSGAESVECAIKTARRYH 113 (392)
Q Consensus 43 ~~~lGh~~p~i~~a~~~q~~~~~~~~--~~~~~~~~~~la~~----L~~~~~~-~~--v~f~~SGseA~e~Aiklar~~~ 113 (392)
++.++++++.+.....+.+......+ .....+...++.++ +.+..++ +. -.|+.+|||||-.|+++||.++
T Consensus 64 ~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~ 143 (460)
T COG0076 64 ANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERW 143 (460)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHH
T ss_conf 56763578886799999999987347998123831588899999999999579976606796170799999999999998
Q ss_pred HCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CHHHHHHHHHCCCCCCC--CCC
Q ss_conf 0013------478600234354656543212345532113479998643332221---00268875410123322--223
Q gi|254780432|r 114 YMAG------KTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAK---FCDLQSLKNQISNDTAA--ILI 182 (392)
Q Consensus 114 ~~~g------~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~---~~d~~~l~~~~~~~iAa--vi~ 182 (392)
.... ..++++||.-. ..|=...=+..+ ++-....++..+ .-|.+++++.+.++.+. |+.
T Consensus 144 ~~~~~~~~~~~~~~P~ii~s~-~aH~s~~Kaa~~---------lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~ 213 (460)
T COG0076 144 RKRALAESGKPGGKPNIVCSE-TAHFSFEKAARY---------LGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVG 213 (460)
T ss_pred HHHHHHCCCCCCCCCEEEECC-CCCEEHHHHHHH---------HCCCCEEEEEECCCEEECHHHHHHHHHHHCCCCEEEE
T ss_conf 766442023446887499457-431209999998---------1885237875247505689999999987464764999
Q ss_pred CCCCCCCCCCCC-CHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC---C-CCCC-CCCEEECC-CCCCCC-CCCC
Q ss_conf 332222112462-1012322110223457213101100344445553101---1-1245-45302103-444444-3443
Q gi|254780432|r 183 EPIQGEGGVRKV-PEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAY---E-WANV-KPDIMTIA-KGMGGG-FPIG 254 (392)
Q Consensus 183 Epv~g~~G~~~~-~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~---e-~~gi-~PDi~~~g-K~l~gG-~P~s 254 (392)
..|.... .-+-++.|.++|.+|++.+.+|=-.-||-- +|.- + .+++ .-|-+++. -..+.- +|.|
T Consensus 214 -----~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~---pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G 285 (460)
T COG0076 214 -----TAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLL---PFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCG 285 (460)
T ss_pred -----ECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHH---HCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCE
T ss_conf -----72688887778899999999976997898734400211---0247422535178882089988642778888706
Q ss_pred CCCCCCC--CCC------CCCCC-C-CCCCCCCCCC--CHHHHHHHHHHHHCCCCCCHHH---HHCCHHHHHHHHHHHHC
Q ss_conf 2100011--122------22233-2-2345321111--0012334554320122210112---10000268899998867
Q gi|254780432|r 255 ACLATNE--VAA------CMNQG-S-HGSTYGGNVL--AMVLGEKVLNIIQSDGFLENVI---NIAKILFEGLTAIKNRF 319 (392)
Q Consensus 255 av~~~~~--i~~------~~~~~-~-~~~T~~gnpl--~~aaa~a~L~~l~~~~l~~~~~---~~g~~l~~~L~~l~~~~ 319 (392)
+++.+++ +.+ .+.++ . ...|-.+... ..+++-++|..+-.+++.+-++ +..+++.++|+++- +
T Consensus 286 ~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~--~ 363 (460)
T COG0076 286 VVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLG--D 363 (460)
T ss_pred EEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--C
T ss_conf 99996889846776123667787786663688505418999999999996788899999999999999999986478--8
Q ss_pred CCEEEEECCCEEEEEEEECCC---HHHHHHHHHHCCE
Q ss_conf 970755046400999872499---8999999996898
Q gi|254780432|r 320 PNMFLEVRGQGLLIGLKTVFS---PALLAAKFRDECL 353 (392)
Q Consensus 320 ~~~v~~vRG~Gl~~~ie~~~~---~~~~~~~l~~~Gl 353 (392)
-+++. .+.....++..... .......+.+.|-
T Consensus 364 ~e~~~--~p~l~~V~fr~~~~~~~~~~~~~~~~~~gw 398 (460)
T COG0076 364 FELVN--EPELPIVAFRLKDDEDTLADLSERLDRRGW 398 (460)
T ss_pred CEEEC--CCCCEEEEEECCCCCCCHHHHHHHHHHCCC
T ss_conf 27633--886507999657643202314789986297
No 305
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase; InterPro: IPR011821 Proteins in this entry are important in the interconversion of the sulphur-containing amino acids L-cysteine and L-methionine in bacteria. In bacteria, inorganic sulphur is reduced to sulphide, which is then used to displace the acetyl group of O-acetyl-L-serine to form the essential amino acid L-cysteine. Biosynthesis of L-methionine then occurs via the transsulphuration pathway which involves the sequential action of two pyridoxal 5'-phosphate (PLP) enzymes, cystathionine gamma-synthase (CGS) and cystathionine beta-lyase (CBL). Firstly CGS catalyses the formation of the intermediate cystathione from a homoserine ester and L-cysteine. This intermediate is then converted by CBL to L-homoserine, which is subsequently methylated by methionine synthase to form L-methionine. For more information see . The CGS enzyme (P00935 from SWISSPROT) from Escherichia coli is, like other CGS enzymes, a homotetramer composed of two catalytically active dimers . The active site of each dimer is found at the interface between the monomers and involves residues from each monomer. Catalysis occurs by alpha,gamma-elimination/replacement reactions..
Probab=97.86 E-value=0.0003 Score=48.18 Aligned_cols=289 Identities=18% Similarity=0.208 Sum_probs=168.4
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 78789999999999997314506875781899999865201013331235655540356777665432001347860023
Q gi|254780432|r 46 LGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIV 125 (392)
Q Consensus 46 lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii 125 (392)
.||+.|+-- .|. +-.||.+..+.+-|.+.-+..-...||||..|+..-+ +++. ..-..+|
T Consensus 35 ~gF~~PR~y----------DYs--RsGNPTRd~l~~aLA~LE~G~~AVvT~~GMsAI~L~~-~~lL-------~pdDLlv 94 (383)
T TIGR02080 35 AGFNEPRAY----------DYS--RSGNPTRDILQQALAELEGGAGAVVTNSGMSAIDLVT-TALL-------GPDDLLV 94 (383)
T ss_pred CCCCCCCCC----------CCC--CCCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHH-HHEE-------CCCCEEE
T ss_conf 567779876----------668--8989756589999999848998256685689887664-3120-------7897688
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 435465654321234553211347999864333222100268875410123-3222233322221124621012322110
Q gi|254780432|r 126 TFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISND-TAAILIEPIQGEGGVRKVPEEFLQQLRK 204 (392)
Q Consensus 126 ~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~-iAavi~Epv~g~~G~~~~~~~~l~~l~~ 204 (392)
+=..||=|..=.--+.. .+..| -+..+.=+|.++|++.++++ +.-|++|+ .++-=+|+.+ .+.|.+
T Consensus 95 APHDCYGGtYRLl~~lA----~kG~~-----~v~fVDQ~D~~al~~ALa~kdPKLVlIEt-PSNPLlRVVD---I~~lc~ 161 (383)
T TIGR02080 95 APHDCYGGTYRLLNALA----KKGQF-----KVQFVDQSDEQALEAALAQKDPKLVLIET-PSNPLLRVVD---IAKLCK 161 (383)
T ss_pred ECCCCCCCHHHHHHHHH----HCCCE-----EEEEEECCHHHHHHHHHHHCCCCEEEEEC-CCCCCCHHHH---HHHHHH
T ss_conf 04326770488886452----07833-----89986076289999999746984799867-9988521888---999998
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCC-CCCCCCEE--ECCCCCCCCC-CC-CCCCCCCC-CCCCC--CCCCCCCCCC
Q ss_conf 22345721310110034444555310111-24545302--1034444443-44-32100011-12222--2332234532
Q gi|254780432|r 205 ICDDIDALLIFDEVQTGYGRTGKLFAYEW-ANVKPDIM--TIAKGMGGGF-PI-GACLATNE-VAACM--NQGSHGSTYG 276 (392)
Q Consensus 205 lc~~~g~llI~DEV~tG~GRtG~~f~~e~-~gi~PDi~--~~gK~l~gG~-P~-sav~~~~~-i~~~~--~~~~~~~T~~ 276 (392)
+.++-|++.++|=+.- .. .+|. ..+=.|++ -..|=|+|=- -| |||+.++. +.+-+ .....|.|
T Consensus 162 La~~~G~~vvVDNTFL------sP-~lQ~PL~LGAD~V~HS~TKYlNGHSDVi~GaVIaKd~q~~e~L~WW~N~lG~t-- 232 (383)
T TIGR02080 162 LAKAVGAVVVVDNTFL------SP-ILQQPLSLGADLVIHSTTKYLNGHSDVIAGAVIAKDPQLAEELAWWANALGVT-- 232 (383)
T ss_pred HHHHCCEEEEEECCCC------CH-HHCCCCCHHCCEEHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCC--
T ss_conf 8761883899855216------77-67275301111301111100034034312124014712234433343002554--
Q ss_pred CCCCCHHHHHHHHHHHH-C-CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEE
Q ss_conf 11110012334554320-1-22210112100002688999988679707550------------------4640099987
Q gi|254780432|r 277 GNVLAMVLGEKVLNIIQ-S-DGFLENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLK 336 (392)
Q Consensus 277 gnpl~~aaa~a~L~~l~-~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie 336 (392)
|.|+..--.+.-|+-+- + ..-..+++++-++|.+ +| .|+.| +|-|.|++||
T Consensus 233 G~aFDSY~tLRGlRTL~~Rm~~~qrnA~~Iv~yL~~--------~P-~V~k~YyPgLpdH~GH~IA~~QQ~GFGAmlSFE 303 (383)
T TIGR02080 233 GGAFDSYLTLRGLRTLAARMRSQQRNAQTIVEYLQT--------QP-LVKKVYYPGLPDHPGHEIAARQQKGFGAMLSFE 303 (383)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CC-CEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEE
T ss_conf 443468899867888888888887889999999844--------89-402633587888667699986256543302333
Q ss_pred ECCCHHHHHHHHHHCCEEE------------------------------EECCCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 2499899999999689899------------------------------6268988995589868899999999999999
Q gi|254780432|r 337 TVFSPALLAAKFRDECLLT------------------------------APSSDNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 337 ~~~~~~~~~~~l~~~Gll~------------------------------~~~~~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
+.-.-..+.+.+-.--+++ .+..+..+|++- --||.+++++=||++
T Consensus 304 L~G~~~~v~~FL~~L~LFtLAESLGGVESLiaHPATMTH~aM~~eAR~~AGI~~~LLRlSv----GlED~~DLiaDL~~g 379 (383)
T TIGR02080 304 LKGGEEAVRRFLGKLSLFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSV----GLEDADDLIADLDQG 379 (383)
T ss_pred ECCCHHHHHHHHHHCCCHHHHHHHCCHHHHHCHHHCCCCHHHHHHHHHHCCCCCCCCEEEE----EECCHHHHHHHHHHH
T ss_conf 2188689999984314012123315512333301012602101898974584114200021----003468899999999
Q ss_pred HHH
Q ss_conf 998
Q gi|254780432|r 387 AIK 389 (392)
Q Consensus 387 l~~ 389 (392)
|..
T Consensus 380 l~a 382 (383)
T TIGR02080 380 LQA 382 (383)
T ss_pred HHC
T ss_conf 741
No 306
>TIGR01328 met_gam_lyase methionine gamma-lyase; InterPro: IPR006237 This family of sequences is a methionine gamma-lyase subset of a family of PLP-dependent trans-sulphuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine..
Probab=97.84 E-value=0.00017 Score=49.81 Aligned_cols=283 Identities=16% Similarity=0.234 Sum_probs=173.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45068757818999998652010133312356555403567776654320013478600234354656543212345532
Q gi|254780432|r 65 WHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 65 ~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
.|+-++..||....|++||...-+.+-++=+.||=-|+.+.| +.. .+ .| +.||+ +++-.|+|++-+..
T Consensus 50 Gy~YsRlgNPTv~~LE~riA~LEg~EAavAt~SGMgAi~A~l-~~~----lk--Ag-Dh~i~-d~~lYGCTfall~~--- 117 (392)
T TIGR01328 50 GYVYSRLGNPTVDLLERRIAELEGAEAAVATASGMGAIAATL-LSL----LK--AG-DHVIS-DETLYGCTFALLED--- 117 (392)
T ss_pred CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH----HH--CC-CEEEE-CCCCCCCHHHHHHH---
T ss_conf 626852677137788889875420467788751289999999-999----85--28-75774-38742014899873---
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC-CEEEECCCCCCCC
Q ss_conf 113479998643332221002688754101233222233322221124621012322110223457-2131011003444
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDID-ALLIFDEVQTGYG 223 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g-~llI~DEV~tG~G 223 (392)
-+..|+- .+.+++....|.+.+.+.|+.-+|-+|+=-. --.+..+ ++.+.+.+++.| +..|+|-+.+-
T Consensus 118 --~ltkfgi---~v~f~~~~~pee~~a~i~dnT~ivYfETPaN-Ptm~liD---~e~v~r~A~~~gG~kVivDNTfat-- 186 (392)
T TIGR01328 118 --ALTKFGI---DVKFVDMASPEEVKAAIKDNTKIVYFETPAN-PTMKLID---LELVVRVAHEKGGVKVIVDNTFAT-- 186 (392)
T ss_pred --HHHHHCC---EEEEECCCCHHHHHHHCCCCCEEEEEECCCC-CCHHHHH---HHHHHHHHHHCCCEEEEEECCCCC--
T ss_conf --2677375---2798317877999984489977999865998-7525775---999999997529828998566277--
Q ss_pred CCCCCCCCCCCCCCCCEEEC--CCCCCC-C-CCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCC---HHHHHHHHHHH
Q ss_conf 45553101112454530210--344444-4-34432100011122222332----23453211110---01233455432
Q gi|254780432|r 224 RTGKLFAYEWANVKPDIMTI--AKGMGG-G-FPIGACLATNEVAACMNQGS----HGSTYGGNVLA---MVLGEKVLNII 292 (392)
Q Consensus 224 RtG~~f~~e~~gi~PDi~~~--gK~l~g-G-~P~sav~~~~~i~~~~~~~~----~~~T~~gnpl~---~aaa~a~L~~l 292 (392)
.+=.+-.++=-|+|+= -|=||| | .--|.+++..|.++.++.-. -|+-. +|.. ..-+++||.+=
T Consensus 187 ----P~lt~P~alG~D~VVHSATKYigGHgDvVaG~~~G~~e~~q~iR~~g~KD~tG~Vi--SPfdAwL~lRGLkTL~~R 260 (392)
T TIGR01328 187 ----PYLTRPVALGVDVVVHSATKYIGGHGDVVAGVLIGDAELLQRIRLVGVKDMTGAVI--SPFDAWLVLRGLKTLAVR 260 (392)
T ss_pred ----HHHCCHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEE--CHHHHHHHHHHHHHHHHH
T ss_conf ----00138036187768942412137612211221107756674401111000566500--557899997436677788
Q ss_pred HCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE------------------CCCEEEEEEEECCCHHHHH---HHHH--
Q ss_conf 0122210112100002688999988679707550------------------4640099987249989999---9999--
Q gi|254780432|r 293 QSDGFLENVINIAKILFEGLTAIKNRFPNMFLEV------------------RGQGLLIGLKTVFSPALLA---AKFR-- 349 (392)
Q Consensus 293 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v------------------RG~Gl~~~ie~~~~~~~~~---~~l~-- 349 (392)
=+.--+|+.++. ++.++||. |..| |--|.|++||+....+... .+|.
T Consensus 261 -M~rhsenA~kvA--------e~Lk~HPa-Ve~V~YPG~~~hp~hdiaakQM~~gGgm~~F~lKgg~a~~~k~~n~LkLI 330 (392)
T TIGR01328 261 -MKRHSENAEKVA--------EYLKEHPA-VEKVYYPGLEEHPDHDIAAKQMKKGGGMLAFELKGGEADAKKLLNRLKLI 330 (392)
T ss_pred -HHHHHHHHHHHH--------HHHHCCCC-CCEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf -877305389999--------98523886-02123688778887408999874048727754325668999998755576
Q ss_pred ----H----CCEE-----------------EEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ----6----8989-----------------962689889955898688999999999999999985
Q gi|254780432|r 350 ----D----ECLL-----------------TAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 350 ----~----~Gll-----------------~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
. +-|+ ..+.++..|||+-- -|+.++++.=|+++|..|
T Consensus 331 r~AVSLGdaEtLIQHPAsMTHavvp~eeR~aaGI~~gm~RlSvG----lEd~~d~~ADl~~aL~~L 392 (392)
T TIGR01328 331 RLAVSLGDAETLIQHPASMTHAVVPKEEREAAGISEGMVRLSVG----LEDVDDVLADLKQALDAL 392 (392)
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECC----HHHHHHHHHHHHHHHCCC
T ss_conf 65531277420005876466789885678444766461223004----526999999999852149
No 307
>TIGR01140 CobD L-threonine-O-3-phosphate decarboxylase, putative; InterPro: IPR005860 L-threonine-O-3-phosphate decarboxylase (CobD) was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, which is the precursor for the linkage between the nucleotide loop and the corrin ring in the biosynthesis of cobalamin . The molecule is a dimer where each subunit consists of a large and small domain . This family contains pyridoxal phosphate-binding class II aminotransferases closely related to histidinol-phosphate aminotransferase (HisC). ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=97.82 E-value=0.00033 Score=47.93 Aligned_cols=314 Identities=20% Similarity=0.263 Sum_probs=186.9
Q ss_pred CCCEEEECHHHHHHHCCCCCCHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH--CCCCCCCCCCCCCCCHHHHH
Q ss_conf 99764641022674357878999-9999999997314506875781899999865201--01333123565554035677
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPE-LVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHS--TFADRVFFTNSGAESVECAI 106 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~-i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~--~~~~~v~f~~SGseA~e~Ai 106 (392)
+-...|||+.+ .+.+|- |. +..|+.+.++.+.+++. +....|-..+.+. ...|.|+-+|+++|.+..|.
T Consensus 3 ~~~~lLDFsAn--inPlgp--P~S~~aa~~~aLd~~~rYPD----~dY~hlrqA~AdH~q~~~dwvl~gnG~~e~i~la~ 74 (349)
T TIGR01140 3 DDDDLLDFSAN--INPLGP--PASVKAALAAALDALERYPD----DDYIHLRQALADHHQVAADWVLAGNGELESIRLAA 74 (349)
T ss_pred CCCCCCCCCCC--CCCCCC--CCCHHHHHHHHHHHHHCCCC----CCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHH
T ss_conf 87430324345--788887--60204589874278760888----43189999986541256012545997278889988
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 76654320013478600234354656--54321234553---21134799986433322210026887541012332222
Q gi|254780432|r 107 KTARRYHYMAGKTNKFRIVTFEGAFH--GRTLATISAGG---KLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 107 klar~~~~~~g~t~r~~ii~~~~~yH--G~t~~a~s~s~---~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
+--. ..|++. ++.--+|- ||.+...-.+- ..+.+++++... .+- ..++--++..-++.-.+|+
T Consensus 75 ~t~~-------~~Gd~~-~V~~P~F~eYgR~~~~~Gae~~ti~w~~~~~~~W~~---~~d-PseiA~l~A~~s~h~~lil 142 (349)
T TIGR01140 75 ETLV-------SRGDAV-LVVAPAFAEYGRELELAGAELKTIRWSLDEADGWRV---LRD-PSEIALLDAVTSEHDLLIL 142 (349)
T ss_pred HHCC-------CCCCEE-EEECCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCC---CCC-HHHHHHHCCCCCCCCEEEE
T ss_conf 6147-------888757-870887026799998569812234577316888745---576-4566541268833135311
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCE-----EECCCCCCC-----CC
Q ss_conf 33322221124621012322110223457213101100344445553101112454530-----210344444-----43
Q gi|254780432|r 182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDI-----MTIAKGMGG-----GF 251 (392)
Q Consensus 182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi-----~~~gK~l~g-----G~ 251 (392)
..|=.=+ |. .+..+-|+.+..-|+.-|+=||+||-..||=--|+ ..++.||| +++-.+||- |+
T Consensus 143 ctPnNPt-G~-l~~r~~l~A~a~rc~~~N~~LllDEAF~dF~pPG~-----E~~l~p~l~~~P~~~vlRSLTKfy~lPGL 215 (349)
T TIGR01140 143 CTPNNPT-GD-LLERDALRALADRCKAVNIELLLDEAFLDFLPPGE-----ETSLVPSLKDTPNVVVLRSLTKFYALPGL 215 (349)
T ss_pred ECCCCCC-CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCCHHHCCCCEEEECCHHHHHCCHHH
T ss_conf 1767698-98-62247899999888874046666556515789864-----43434133268978997111554025024
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC----CHHHHHCCHHHHHHHHH--HHHCCCEEE
Q ss_conf 4432100011-1222223322345321111001233455432012221----01121000026889999--886797075
Q gi|254780432|r 252 PIGACLATNE-VAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFL----ENVINIAKILFEGLTAI--KNRFPNMFL 324 (392)
Q Consensus 252 P~sav~~~~~-i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~----~~~~~~g~~l~~~L~~l--~~~~~~~v~ 324 (392)
=+|..+...| .+..++... .||.-|-++.+|+..+|+ ++++. ..+..-+..|.+.|.++ ..-||+
T Consensus 216 RlGylva~~Da~la~~r~~r--~pW~vnalAaaag~~al~---~sef~q~tw~wl~~erar~~qaL~~lP~l~v~Ps--- 287 (349)
T TIGR01140 216 RLGYLVAVDDALLARLRAAR--RPWSVNALAAAAGAAALR---DSEFRQETWRWLAEERARLRQALADLPLLDVYPS--- 287 (349)
T ss_pred HHHHHHCCCHHHHHHHHHHC--CCCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---
T ss_conf 45455516617899999742--899877689999999876---6789999987436677899999971788755888---
Q ss_pred EECCCEEEEEEEECCCHHHHHH-HHHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 5046400999872499899999-999689899626------898899558986889999999999999
Q gi|254780432|r 325 EVRGQGLLIGLKTVFSPALLAA-KFRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 325 ~vRG~Gl~~~ie~~~~~~~~~~-~l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
.-=++=+++...+-..++ .+-+.+|+++-+ +.+-+|++ +=|.+|=++++.+|.+
T Consensus 288 ----~anfLLl~~~~~~~dl~~~llt~~~IliRdc~~fpgLds~~~RVA---vRt~a~N~rLlaALa~ 348 (349)
T TIGR01140 288 ----RANFLLLKVEREDVDLQEELLTKERILIRDCLSFPGLDSDYYRVA---VRTAAENDRLLAALAD 348 (349)
T ss_pred ----CCCCEEEECCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEE---ECCHHHHHHHHHHHHC
T ss_conf ----876114545898688999998743410012057888887527888---5285547899999613
No 308
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase; InterPro: IPR012703 Phosphonates are a class of organophosphorus compounds, characterised by a stable C-P bond, which are found in a variety of biologically produced molecules including antiobiotics, lipids, proteins and polysaccharides . The functions of these molecules include phosphorus storage, cell communication, host recognition and chemical warfare. 2-Aminoethylphosphonate (AEP), the most common naturally occurring phosphonate, is an important precursor used in the biosynthesis of phosphonolipids, phosphonoproteins, and phosphonoglycans. This entry represents 2-aminoethylphosphonate-pyruvate transaminase (AEPT)(2.6.1.37 from EC) which catalyses the interconversion of AEP and phosphonoacetaldehyde (P-Ald), coupled with the interconversion of pryuvate and L-alanine. In some bacterial species this is the first step in an AEP degradation pathway which allows them to utilise this compound as a source of carbon, nitrogen and phosphorus. Phosphonoacetaldeyhde hydrolase, often encoded by an adjacent gene, then converts P-Ald to acetaldehyde and phosphate.Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lyase complex as found in Escherichia coli. The crystal structure of AEPT from Salmonella typhimurium has been studied to 2.2 A resolution . The protein is a homodimer where each subunit is composed of two domains, large and small. The large domain forms an alpha-beta complex characteristic of the aspartate transaminase family, while the small domain is comosed of highly twisted beta strands. The active site contains a pyridoxal 5'-phosphate cofactor and is found at the domain interface, being composed of residues from both subunits..
Probab=97.79 E-value=0.0007 Score=45.83 Aligned_cols=282 Identities=16% Similarity=0.227 Sum_probs=161.4
Q ss_pred HHHHHHHHHHHHCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 89999986520101-----3331235655540356777665432001347860023435465654321234-55321134
Q gi|254780432|r 75 QQEIFANHLIHSTF-----ADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATIS-AGGKLQYL 148 (392)
Q Consensus 75 ~~~~la~~L~~~~~-----~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s-~s~~~~~~ 148 (392)
..+....+|++... +.-|.+.=|||=|||++| ....+++.-+.+|...|+| |.=+.-++ +-..+.+
T Consensus 37 ~~~~ir~~L~~la~~~~~~YT~VllQGSGtf~VEA~i------Gs~~pr~~~klLv~~NGAY-G~R~~~ia~~l~i~~~- 108 (366)
T TIGR02326 37 VVESIRQKLLKLATAEEEKYTTVLLQGSGTFAVEAVI------GSAVPRKDGKLLVVINGAY-GKRIAQIAEYLQIPHH- 108 (366)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH------HCCCCCCCCEEEEEECCCH-HHHHHHHHHHHCCCEE-
T ss_conf 7999999999986068985467861275125556654------1124788973899717853-4789999998478616-
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCC-----CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC
Q ss_conf 799986433322210026887541012-----332222333222211246210123221102234572131011003444
Q gi|254780432|r 149 EGFGPKIEGFDQAKFCDLQSLKNQISN-----DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG 223 (392)
Q Consensus 149 ~~~~p~~~~~~~~~~~d~~~l~~~~~~-----~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 223 (392)
.-.+.+....++.+.++.+.+ +||-|=.|+-- |+.=| +..+.++.++||..+|+|= ++-||
T Consensus 109 ------~~~~~E~~~~~~~~ve~~L~~dp~ItH~A~vHcETtT---GiLNP----i~~~~~~~~~hGk~~ivDA-MSSfG 174 (366)
T TIGR02326 109 ------VVETEENEPTNVVEVEAILAADPAITHVALVHCETTT---GILNP----IEAVAKVAKRHGKVTIVDA-MSSFG 174 (366)
T ss_pred ------EEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCC---CCCCH----HHHHHHHHHHCCCEEEEEC-CCCCC
T ss_conf ------7515877777889999998518971278898367526---62112----8999999985597799853-41137
Q ss_pred CCCCCCCCCCCCCCCCEE--ECCCCCCCCCC-CCCCCCCCCCCCC------------CCC--------CCCCCCCCCCCC
Q ss_conf 455531011124545302--10344444434-4321000111222------------223--------322345321111
Q gi|254780432|r 224 RTGKLFAYEWANVKPDIM--TIAKGMGGGFP-IGACLATNEVAAC------------MNQ--------GSHGSTYGGNVL 280 (392)
Q Consensus 224 RtG~~f~~e~~gi~PDi~--~~gK~l~gG~P-~sav~~~~~i~~~------------~~~--------~~~~~T~~gnpl 280 (392)
--+ .+-..+.=|.+ .-+|-+. |.| ++-|+++++-.+. +++ |..=.| +|.
T Consensus 175 gi~----idi~~l~~D~LIssanKCi~-GVPGfgFviA~~~~L~~~~g~arSLsLDLydQw~~M~~~~GkWRFT---sPT 246 (366)
T TIGR02326 175 GIP----IDIAELDIDYLISSANKCIQ-GVPGFGFVIAKQAELEKCAGNARSLSLDLYDQWECMEKQHGKWRFT---SPT 246 (366)
T ss_pred CCH----HHHHHHCCCEEEECCCCCCC-CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEC---CCH
T ss_conf 600----11643256763523478133-7684366776899998620432102354899999964489962217---726
Q ss_pred C-HHHHHHHHHHHHCC-CCCC---HHHHHCCHHHHHHHHHHHHCCCEEEEECCCE-EEEEEEECCCH----HHHHHHHHH
Q ss_conf 0-01233455432012-2210---1121000026889999886797075504640-09998724998----999999996
Q gi|254780432|r 281 A-MVLGEKVLNIIQSD-GFLE---NVINIAKILFEGLTAIKNRFPNMFLEVRGQG-LLIGLKTVFSP----ALLAAKFRD 350 (392)
Q Consensus 281 ~-~aaa~a~L~~l~~~-~l~~---~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G-l~~~ie~~~~~----~~~~~~l~~ 350 (392)
= ..|=..+|..+++| ++.. |.+...+.|..+|++|--+ .++.+ .-.+ -+.+|..+.++ ..+.+++++
T Consensus 247 HvV~Af~qAL~el~~EGGv~aR~~RY~~nq~~L~~~m~~LGF~--~ll~~-~~~sPIItsF~~P~~~~y~F~~fY~~lk~ 323 (366)
T TIGR02326 247 HVVHAFAQALLELEKEGGVEARYQRYQSNQKLLVAGMRALGFE--PLLDD-ELQSPIITSFYSPEDPDYRFADFYQRLKE 323 (366)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC--CCCCH-HHCCCEEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 8999999999999845897457899999999999999861551--14754-34588689850778897138999999976
Q ss_pred CCEEEEECC---CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 898996268---988995589868899999999999999998
Q gi|254780432|r 351 ECLLTAPSS---DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 351 ~Gll~~~~~---~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
+|-+++|.. -++.|+.-==-+..+||.+++++|.+++..
T Consensus 324 ~GFviYPGKvs~~~~FRiG~IG~V~~~di~~l~~~I~~~~~~ 365 (366)
T TIGR02326 324 QGFVIYPGKVSQVDTFRIGNIGDVDAADIERLVTAIGKALYL 365 (366)
T ss_pred CCCEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 781762761045662111676763889999999999987504
No 309
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase; InterPro: IPR013375 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology . The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric . Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices , and are mostly dimeric or multimeric, containing at least three conserved regions , , . However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases; these synthetases are further divided into three subclasses, a, b and c, according to sequence homology. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases . Many archaeal species lack cysteinyl-tRNA synthetase, an essential enzyme that provides Cys-tRNA(Cys) in other organisms. Instead, in a two step pathway, tRNA-Cys is acylated with O-phosphoserine (Sep) to form Sep-tRNA(Cys), which is subsequently converted to Cys-tRNA(Cys) . This pathway is also thought to function as the sole route of cysteine biosynthesis in these organisms. Several other archaeal species use both this pathway and direct tRNA(Cys) aminoacylation to synthesize Cys-tRNA(Cys), but this pathway appears to be the only route for cysteine biosynthesis. Proteins in this entry catalyse the second step in this pathway using pyridoxal phosphate and a sulphur donor to synthesize Cys from Sep while attached to the tRNA..
Probab=97.75 E-value=0.00075 Score=45.63 Aligned_cols=287 Identities=16% Similarity=0.203 Sum_probs=165.1
Q ss_pred CHHHHHHHHH-HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8189999986-520101333123565554035677766543200134786002343546565432123455321134799
Q gi|254780432|r 73 STQQEIFANH-LIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGF 151 (392)
Q Consensus 73 ~~~~~~la~~-L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~ 151 (392)
-|+-..|.++ |.+-.+.|.++.++.-=|+=.+-| + +.++.|- .|+.++.=|=.|..|--=.|-.-.-=
T Consensus 50 ~PpI~~F~~daLA~FlG~D~~R~t~GARe~KfaVM-----h--alC~~GD--~vV~D~~AHYtsyvAAEragl~v~eV-- 118 (381)
T TIGR02539 50 KPPIKDFLEDALAEFLGMDVVRVTHGAREGKFAVM-----H--ALCKEGD--VVVLDGLAHYTSYVAAERAGLNVKEV-- 118 (381)
T ss_pred CCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHH-----H--HHCCCCC--EEEECCCCCHHHHHHHHHCCCEEEEC--
T ss_conf 88310004554266727974540677502457887-----6--4089989--89985874544589997549727881--
Q ss_pred CCCCCCCCC-----CCCHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 986433322-----21002-688754101233222233322221124621012322110223457213101100344445
Q gi|254780432|r 152 GPKIEGFDQ-----AKFCD-LQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRT 225 (392)
Q Consensus 152 ~p~~~~~~~-----~~~~d-~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRt 225 (392)
|+-.+.+. ..|.. +|.+++.-.++++-.++==+-|+-|-.+ + -+++.++|+++|++|.+.==+| +||.
T Consensus 119 -Py~~g~P~Y~v~~e~Y~~viee~~d~~G~~~~LallThvDG~YGNL~-D---A~kva~vc~~~gvPlLLNCAY~-vGRm 192 (381)
T TIGR02539 119 -PYETGHPEYKVDPEGYKEVIEEVEDESGKPVALALLTHVDGEYGNLA-D---AKKVAKVCREKGVPLLLNCAYT-VGRM 192 (381)
T ss_pred -CCCCCCCEEEECHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCH-H---HHHHHHHHHHCCCCEEECCCCE-EEEE
T ss_conf -65588860764166788888655202798834899840268867511-2---4568766542078622124505-2100
Q ss_pred CCCCCCCCCCCCCCEEECC--CCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCC--------CCCCHHHHHHHHHHHH-
Q ss_conf 5531011124545302103--44444434432100011122222332-2345321--------1110012334554320-
Q gi|254780432|r 226 GKLFAYEWANVKPDIMTIA--KGMGGGFPIGACLATNEVAACMNQGS-HGSTYGG--------NVLAMVLGEKVLNIIQ- 293 (392)
Q Consensus 226 G~~f~~e~~gi~PDi~~~g--K~l~gG~P~sav~~~~~i~~~~~~~~-~~~T~~g--------npl~~aaa~a~L~~l~- 293 (392)
--..-.+.||+|+=| |+|...=|+|.+..++|-.+..-..+ .-..-+| -.|+|.+-=+.|=.|.
T Consensus 193 ----Pv~~ke~~~DFiVGSGHKSMAASaP~GvLa~~eE~~~~v~r~SslrGdvsG~~~~~KEvElLGCT~rGap~~TlmA 268 (381)
T TIGR02539 193 ----PVSAKEIKADFIVGSGHKSMAASAPCGVLAMSEEWEDKVLRKSSLRGDVSGRKFPVKEVELLGCTSRGAPIVTLMA 268 (381)
T ss_pred ----CCCCCCCCCCEEEECCCCHHHHCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
T ss_conf ----3157777876778068513221266002145422234011023210033663447412774486324047999973
Q ss_pred C-CCCCCHHHH------HCCHHHHHHHHHHHHCCCEEEEECCCEE------EEEEEECC-------C---HHHHHHHHHH
Q ss_conf 1-222101121------0000268899998867970755046400------99987249-------9---8999999996
Q gi|254780432|r 294 S-DGFLENVIN------IAKILFEGLTAIKNRFPNMFLEVRGQGL------LIGLKTVF-------S---PALLAAKFRD 350 (392)
Q Consensus 294 ~-~~l~~~~~~------~g~~l~~~L~~l~~~~~~~v~~vRG~Gl------~~~ie~~~-------~---~~~~~~~l~~ 350 (392)
+ +...+|+++ +.++|.++|+++ ..++++|- ++-||-+- . .--+.+-|.+
T Consensus 269 SfP~VveRV~~Wd~Ev~ktRy~v~eLE~i--------gG~~QlG~kPk~HDLv~FEtPgf~Eia~~~kr~GyFLY~ELKk 340 (381)
T TIGR02539 269 SFPHVVERVKRWDEEVKKTRYFVAELEDI--------GGFKQLGVKPKEHDLVKFETPGFHEIAKKHKRRGYFLYEELKK 340 (381)
T ss_pred CCCHHHHHCCCHHHHHHHHHHHHHHHHHC--------CCEEECCCCCCCCCCEEECCCCCHHHHCCCCCCCCCHHHHHHH
T ss_conf 28101122023156677765788876421--------7888648688825641444884013414487977640566531
Q ss_pred CCEEEEECC-CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 898996268-988995589868899999999999999998
Q gi|254780432|r 351 ECLLTAPSS-DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 351 ~Gll~~~~~-~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
|||.=+..| ...++++- +=+|+||++-.++.|++-+.+
T Consensus 341 Rgi~GI~~G~Tk~~K~Sv-YGL~~Eqv~~Vv~sf~eI~e~ 379 (381)
T TIGR02539 341 RGIVGIRSGQTKEIKLSV-YGLTKEQVEYVVDSFKEIVEE 379 (381)
T ss_pred CCCEECCCCCCEEEEEEE-ECCCCCHHHHHHHHHHHHHHH
T ss_conf 583001788742776433-127521144446789999985
No 310
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=97.68 E-value=0.00016 Score=50.09 Aligned_cols=223 Identities=15% Similarity=0.157 Sum_probs=107.6
Q ss_pred CCCCCHHHHHHHHHHH-HHCCCCCCCCCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 8757818999998652-010133312356555-40356777665432001347860023435465654321234553-21
Q gi|254780432|r 69 NLYQSTQQEIFANHLI-HSTFADRVFFTNSGA-ESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGG-KL 145 (392)
Q Consensus 69 ~~~~~~~~~~la~~L~-~~~~~~~v~f~~SGs-eA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~-~~ 145 (392)
+++.+.-...-|+++. +..+.++.+|...|| .+|-+++..+- ++|. +|+.-+++ |-.-..++.++| .|
T Consensus 53 ~L~~p~g~I~eAq~laA~~~ga~~s~flvnGsT~g~~a~i~a~~-------~~gd-~vlv~RN~-HkSv~~gl~l~g~~P 123 (294)
T cd00615 53 DLLDPTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVC-------GPGD-KILIDRNC-HKSVINGLVLSGAVP 123 (294)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHC-------CCCC-EEEEECCC-HHHHHHHHHHCCCEE
T ss_conf 98898719999999999983999669982772699999999832-------8999-89982651-899999999869848
Q ss_pred CCCCCC-CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 134799-9864333222100268875410123322223332222112462101232211022345721310110034444
Q gi|254780432|r 146 QYLEGF-GPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 146 ~~~~~~-~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
.|..+. .+...-..-++..+++......++--+.++..|-.- |+..- ++.+.++|+++|+.+++||-
T Consensus 124 vyl~p~~~~~~gi~~~i~~~~~~~al~~~p~~kav~lt~PtY~--G~~~D----l~~i~~~~h~~~~~llVDEA------ 191 (294)
T cd00615 124 VYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYY--GICYN----LRKIVEEAHHRGLPVLVDEA------ 191 (294)
T ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCC--EEEEC----HHHHHHHHHHCCCEEEEECC------
T ss_conf 9960643555695389999999999985899658999779988--77668----99999998404997999775------
Q ss_pred CCCCCCCC-CCC-----CCCCEEECC--CCCCCCC-CCCCCCCCCCCCCC--CCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 55531011-124-----545302103--4444443-44321000111222--223-322345321111001233455432
Q gi|254780432|r 225 TGKLFAYE-WAN-----VKPDIMTIA--KGMGGGF-PIGACLATNEVAAC--MNQ-GSHGSTYGGNVLAMVLGEKVLNII 292 (392)
Q Consensus 225 tG~~f~~e-~~g-----i~PDi~~~g--K~l~gG~-P~sav~~~~~i~~~--~~~-~~~~~T~~gnpl~~aaa~a~L~~l 292 (392)
-|..|.|. .+. .-.|+++-| |.|+ ++ +-|.+..+.+..+. ++. .....|.+-+=+-+|.--.+-..+
T Consensus 192 hGah~~F~~~lp~~a~~~GAD~vv~S~HKtL~-altQ~s~lh~~~~~v~~~~l~~~l~~~qTTSPSYllmASlD~ar~~~ 270 (294)
T cd00615 192 HGAHFRFHPILPSSAAMAGADIVVQSTHKTLP-ALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMM 270 (294)
T ss_pred CHHHHHCCCCCCCCHHHCCCEEEEECHHHCCC-CCCHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 40344318778755666696399962321453-32225320237996899999999998838875899999999999999
Q ss_pred H--CCCCCCHHHHHCCHHHHHHH
Q ss_conf 0--12221011210000268899
Q gi|254780432|r 293 Q--SDGFLENVINIAKILFEGLT 313 (392)
Q Consensus 293 ~--~~~l~~~~~~~g~~l~~~L~ 313 (392)
. .+++++++-++...++++++
T Consensus 271 ~~~G~~l~~~~l~~a~~~R~~i~ 293 (294)
T cd00615 271 ALEGKELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999965
No 311
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=97.63 E-value=0.0015 Score=43.71 Aligned_cols=313 Identities=15% Similarity=0.156 Sum_probs=161.4
Q ss_pred CHHHHHHHHHHHHHCCCCC-------CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9999999999997314506-------875781899999865201013331235655540356777665432001347860
Q gi|254780432|r 50 HPELVAILKSQSEKLWHVS-------NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKF 122 (392)
Q Consensus 50 ~p~i~~a~~~q~~~~~~~~-------~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~ 122 (392)
.++-.+|+.+--+..+..- .....|+-..|-+.|.+-.+.|.+.+++..-||-.+.|- ..+..|
T Consensus 30 t~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMh-------al~~~g-- 100 (382)
T COG1103 30 TEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMH-------ALCKEG-- 100 (382)
T ss_pred CHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHH-------HHCCCC--
T ss_conf 79999999986488634431045741102588588899988987198634423651256799999-------751589--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH---HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 0234354656543212345532113479998643332221002---6887541012332222333222211246210123
Q gi|254780432|r 123 RIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCD---LQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFL 199 (392)
Q Consensus 123 ~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d---~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l 199 (392)
..++.++.-|=.|..|.--.|-....-+-. -.|.+...|.+. +|..++.-.+.++-.++--+-|+-|..+- -
T Consensus 101 d~vV~D~~aHYttyvAAEragl~v~eVp~t-g~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D----a 175 (382)
T COG1103 101 DWVVVDSLAHYTTYVAAERAGLNVAEVPNT-GYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD----A 175 (382)
T ss_pred CEEEECCCCHHHHHHHHHHCCCEEEECCCC-CCCCEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHH----H
T ss_conf 889974742278899998639758966789-99845766888899999998624898448999635777577221----6
Q ss_pred HHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCCCCCCCCCCCCCCCCCCCC--------
Q ss_conf 221102234572131011003444455531011124545302103--4444443443210001112222233--------
Q gi|254780432|r 200 QQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA--KGMGGGFPIGACLATNEVAACMNQG-------- 269 (392)
Q Consensus 200 ~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g--K~l~gG~P~sav~~~~~i~~~~~~~-------- 269 (392)
+++.++|++||++|++.--.| .||.- ...-.+.+|+++-| |++...=|++.+..+++-.+..-..
T Consensus 176 kkva~ic~e~gvPlllN~AYt-~Grmp----vs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~K 250 (382)
T COG1103 176 KKVAKICREYGVPLLLNCAYT-VGRMP----VSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKK 250 (382)
T ss_pred HHHHHHHHHCCCCEEEECCEE-ECCCC----CCCCCCCCCEEEECCCCCHHCCCCEEEEEEHHHHHHHHHHHCCCCCCCC
T ss_conf 789999987299568512102-23211----3665567877972485300114870477513677789986315446533
Q ss_pred ---CCCCCCCCCCCCHHHHH--HHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH--HCCCEEEEECCCEEEEEEEECCC--
Q ss_conf ---22345321111001233--4554320122210112100002688999988--67970755046400999872499--
Q gi|254780432|r 270 ---SHGSTYGGNVLAMVLGE--KVLNIIQSDGFLENVINIAKILFEGLTAIKN--RFPNMFLEVRGQGLLIGLKTVFS-- 340 (392)
Q Consensus 270 ---~~~~T~~gnpl~~aaa~--a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~--~~~~~v~~vRG~Gl~~~ie~~~~-- 340 (392)
..|-|-.|-|+..-.|. .+.+.+++ + +.--+..+.|..+|+++-. +.. ......-||. +|.+.=
T Consensus 251 EvellGCT~rGapivTlmASfP~V~eRVkr--W-deEv~kaR~fv~elEkigg~~qlG---~rPk~HdLm~-Fetp~f~e 323 (382)
T COG1103 251 EVELLGCTVRGAPIVTLMASFPHVVERVKR--W-DEEVEKARWFVAELEKIGGVKQLG---ERPKNHDLMK-FETPVFHE 323 (382)
T ss_pred EEEEECCCCCCCHHHHHHHCCHHHHHHHHH--H-HHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCEEE-ECCCHHHH
T ss_conf 256614324684389987407799999987--8-899999999999999743088717---7976564255-33712899
Q ss_pred --------HHHHHHHHHHCCEEEEECC-CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf --------8999999996898996268-988995589868899999999999999998
Q gi|254780432|r 341 --------PALLAAKFRDECLLTAPSS-DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 341 --------~~~~~~~l~~~Gll~~~~~-~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
.-.+.+.|.++||.-...| ..-++++ -+-++.+|++..++.|++-+.+
T Consensus 324 Iakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~s-vyGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 324 IAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLS-VYGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred HHHHCCCCCEEEHHHHHHCCCCCCCCCCEEEEEEE-EECCCHHHHHHHHHHHHHHHHH
T ss_conf 98757678546689887658665066751378887-5057799999999999999986
No 312
>KOG3846 consensus
Probab=97.60 E-value=0.0069 Score=39.33 Aligned_cols=332 Identities=16% Similarity=0.119 Sum_probs=175.5
Q ss_pred HCCCCCCHHHHHHHHHHHHHCCC---CCCCCCCHHHH---HH-HHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 35787899999999999973145---06875781899---99-9865201013--3312356555403567776654320
Q gi|254780432|r 44 NSLGHSHPELVAILKSQSEKLWH---VSNLYQSTQQE---IF-ANHLIHSTFA--DRVFFTNSGAESVECAIKTARRYHY 114 (392)
Q Consensus 44 ~~lGh~~p~i~~a~~~q~~~~~~---~~~~~~~~~~~---~l-a~~L~~~~~~--~~v~f~~SGseA~e~Aiklar~~~~ 114 (392)
++||--.....+.|.+.+++-.- .++.-.-.+|+ +. ...+....|+ ..|-.+||=+ +|-..+-+.. |
T Consensus 74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLT-vNlh~Ll~sF-y-- 149 (465)
T KOG3846 74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLT-VNLHSLLISF-Y-- 149 (465)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHHHH-HHHHHHHHHH-C--
T ss_conf 61356725667689999988876402101146666145562465543443067701444575566-6899999885-0--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCC--CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 01347860023435465654321234---55321--13479998643332221002688754101233222233322221
Q gi|254780432|r 115 MAGKTNKFRIVTFEGAFHGRTLATIS---AGGKL--QYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEG 189 (392)
Q Consensus 115 ~~g~t~r~~ii~~~~~yHG~t~~a~s---~s~~~--~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~ 189 (392)
+-...|.||+--.++|--...+--| +-|.. .-..-..|+ ++-......|+-.....-.|++|-|.+.-||--.
T Consensus 150 -KPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePR-EGEetlRteDILd~IEkngDeiA~v~fSGvqyYT 227 (465)
T KOG3846 150 -KPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPR-EGEETLRTEDILDTIEKNGDEIALVCFSGVQYYT 227 (465)
T ss_pred -CCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHEEEECCC-CCCCCHHHHHHHHHHHHCCCEEEEEEEECCEEEC
T ss_conf -78604633100047788417888756523578757823773456-6631010787999997368769999950524422
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE--ECCCCCCCCC-CCCCCCCCCCCCCC-
Q ss_conf 1246210123221102234572131011003444455531011124545302--1034444443-44321000111222-
Q gi|254780432|r 190 GVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM--TIAKGMGGGF-PIGACLATNEVAAC- 265 (392)
Q Consensus 190 G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~--~~gK~l~gG~-P~sav~~~~~i~~~- 265 (392)
|-..- +.++...-..-|++.-+|=-- .+|-. ..--.+||+ |+. |-=|-+..|- -+++..+.++....
T Consensus 228 GQ~Fd----i~aIT~Agq~kgc~VGfDLAH-AvgNV--pL~LHdWgV--DFACWCSYKYlnaGaGgIgGlFvHekh~~~~ 298 (465)
T KOG3846 228 GQYFD----IGAITFAGQFKGCLVGFDLAH-AVGNV--PLQLHDWGV--DFACWCSYKYLNAGAGGIGGLFVHEKHTKES 298 (465)
T ss_pred CCCCC----HHHHHHCCCCCCCEECHHHHH-HHCCC--CEEEEECCC--CEEEEEEECCCCCCCCCCCEEEEEHHHHCCH
T ss_conf 53224----144332135788476222564-53577--527761577--6477742011356887522256425432102
Q ss_pred -----------------------CCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCC
Q ss_conf -----------------------2233223453211110-0123345543201222101121000026889999886797
Q gi|254780432|r 266 -----------------------MNQGSHGSTYGGNVLA-MVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPN 321 (392)
Q Consensus 266 -----------------------~~~~~~~~T~~gnpl~-~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~ 321 (392)
+.++..|.--+..|+- .+|-+++|+++.+-+ ++++++++-++-.-|+.|.+..-.
T Consensus 299 ~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~lRkrS~lLTgYleyL~k~~~g 377 (465)
T KOG3846 299 LPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INELRKRSLLLTGYLEYLLKASKG 377 (465)
T ss_pred HHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 1677502147800343001203557641121137984737998876699998853-998865344677689999987416
Q ss_pred -------------EE--EEECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECC-CCCCCHHHHHHHHHHHHH
Q ss_conf -------------07--55046400999872499899999999689899626898899558-986889999999999999
Q gi|254780432|r 322 -------------MF--LEVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILP-PLTITAEEIHEGLERIER 385 (392)
Q Consensus 322 -------------~v--~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~P-pl~it~~eid~~i~~l~~ 385 (392)
++ ..+.-+|.-+++.|..+...+...+.++|+..-...+|+||++| ||.=|-.|+..++..|.+
T Consensus 378 ~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~~~vfqeL~krGv~~DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e 457 (465)
T KOG3846 378 YKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPTPKVFQELHKRGVIGDKRRPNVIRVAPVPLYNTFSDVYIFVNALNE 457 (465)
T ss_pred CCCHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCEECCCCCCCCEEEECCHHHCCHHHHHHHHHHHHH
T ss_conf 67600221615998478641445646999967995188999987370132558883286142000018999999999999
Q ss_pred HHHHHC
Q ss_conf 999852
Q gi|254780432|r 386 TAIKLS 391 (392)
Q Consensus 386 al~~L~ 391 (392)
++.++.
T Consensus 458 ~~d~~e 463 (465)
T KOG3846 458 AMDKLE 463 (465)
T ss_pred HHHHHH
T ss_conf 998752
No 313
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.54 E-value=0.0095 Score=38.41 Aligned_cols=313 Identities=18% Similarity=0.200 Sum_probs=147.5
Q ss_pred CHHHHHHHHHHHHH-CCCC--CCC-CC-CH---HHHHHHH-HHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999999973-1450--687-57-81---8999998-6520101333123-5655540356777665432001347
Q gi|254780432|r 50 HPELVAILKSQSEK-LWHV--SNL-YQ-ST---QQEIFAN-HLIHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKT 119 (392)
Q Consensus 50 ~p~i~~a~~~q~~~-~~~~--~~~-~~-~~---~~~~la~-~L~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t 119 (392)
-|.|.+|.-..+.. +... ... |. .+ ..+.++- +..+.++.+.+-. -.|||-||.++.. |.. .+
T Consensus 39 S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~-All------~p 111 (413)
T COG0112 39 SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYL-ALL------QP 111 (413)
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH-HHC------CC
T ss_conf 89999997457753011589976356787217999999999999984887504588875689999999-973------89
Q ss_pred CCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 860023435465654-321-234553211347999864333222100268875410123322223332222112462101
Q gi|254780432|r 120 NKFRIVTFEGAFHGR-TLA-TISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEE 197 (392)
Q Consensus 120 ~r~~ii~~~~~yHG~-t~~-a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~ 197 (392)
| .+|+..+-+.-|+ |.+ ..+.+|.. ++.-.-|..+....+.|..++.+..+...++ |+ .|. ..++-+-+
T Consensus 112 G-D~imgm~l~~GGHltHg~~v~~sG~~-~~~v~Y~vd~et~~IDyD~~~k~a~e~kPKl---ii---~G~-SaY~r~id 182 (413)
T COG0112 112 G-DTIMGLDLSHGGHLTHGSPVNFSGKL-FNVVSYGVDPETGLIDYDEVEKLAKEVKPKL---II---AGG-SAYSRPID 182 (413)
T ss_pred C-CEEEECCCCCCCCCCCCCCCCCCCCE-EEEEECCCCCCCCCCCHHHHHHHHHHHCCCE---EE---ECC-CCCCCCCC
T ss_conf 8-85750567878765579987766405-7767624063347517999999999849978---99---776-03554467
Q ss_pred HHHHHHCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCCCCCEE--ECCCCCCCCCCCCCCC-CCC-CCCCCCCCCCCC
Q ss_conf 232211022345721310110-03444455531011124545302--1034444443443210-001-112222233223
Q gi|254780432|r 198 FLQQLRKICDDIDALLIFDEV-QTGYGRTGKLFAYEWANVKPDIM--TIAKGMGGGFPIGACL-ATN-EVAACMNQGSHG 272 (392)
Q Consensus 198 ~l~~l~~lc~~~g~llI~DEV-~tG~GRtG~~f~~e~~gi~PDi~--~~gK~l~gG~P~sav~-~~~-~i~~~~~~~~~~ 272 (392)
++++|++|++.|+.|++|=- ..|+=-.|.+ - .-.. ..|++ +.-|.|-| |=|+++ .++ ++.+.++..-.-
T Consensus 183 -~~~~reIad~VGA~L~~DmAHiaGLVA~G~~-p-~P~~-~AdvVTtTTHKTlrG--PrGG~Il~~~eel~kkin~aVFP 256 (413)
T COG0112 183 -FKRFREIADEVGAYLMVDMAHVAGLIAGGVH-P-NPLP-HADVVTTTTHKTLRG--PRGGIILTNDEELAKKINSAVFP 256 (413)
T ss_pred -HHHHHHHHHHHCCEEEEHHHHHHHHHHCCCC-C-CCCC-CCCEEECCCCCCCCC--CCCEEEEECCHHHHHHHHHHCCC
T ss_conf -8999999987193677217788888745667-9-9987-552675775347789--98417983629999876400077
Q ss_pred CCCCCCCCC--HHHHHHHHHHHHCCC---CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE-EEEEEEECC---CHHH
Q ss_conf 453211110--012334554320122---2101121000026889999886797075504640-099987249---9899
Q gi|254780432|r 273 STYGGNVLA--MVLGEKVLNIIQSDG---FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG-LLIGLKTVF---SPAL 343 (392)
Q Consensus 273 ~T~~gnpl~--~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G-l~~~ie~~~---~~~~ 343 (392)
.+.+ +|+- +|+-.-++....+.+ ..+++-+..+.|.+.|.+. .+ .+++ -|.- =++-+++.. ..+.
T Consensus 257 g~qg-gpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~--G~-~vvs--GgTdnHl~lVDl~~~~~~Gk~ 330 (413)
T COG0112 257 GLQG-GPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER--GF-KVVS--GGTDNHLVLVDLRSKGLTGKK 330 (413)
T ss_pred CCCC-CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC--CC-EEEC--CCCCCEEEEEECCCCCCCHHH
T ss_conf 6678-8278889999999999728138999999999999999999976--98-6715--886444899972467987789
Q ss_pred HHHHHHHCCEEEE----E------CCCCEEEECCC-C---CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999996898996----2------68988995589-8---688999999999999999985
Q gi|254780432|r 344 LAAKFRDECLLTA----P------SSDNVVRILPP-L---TITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 344 ~~~~l~~~Gll~~----~------~~~~~irl~Pp-l---~it~~eid~~i~~l~~al~~L 390 (392)
....|-+-|+.+. | .-+..||+.-| + -+.++|..++-+.|.+++...
T Consensus 331 ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~ 391 (413)
T COG0112 331 AEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGL 391 (413)
T ss_pred HHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 9999997097652688999998887876634066888635798899999999999999550
No 314
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=97.51 E-value=0.00042 Score=47.24 Aligned_cols=325 Identities=14% Similarity=0.199 Sum_probs=148.7
Q ss_pred EECHHHHHHHCCCCCCHHHHHHHHHHHHHCCC--CCC----CCCCHHHHHHHHHHHHH--CC---CCCCC--CCCCCCCC
Q ss_conf 64102267435787899999999999973145--068----75781899999865201--01---33312--35655540
Q gi|254780432|r 35 LDFASGIAVNSLGHSHPELVAILKSQSEKLWH--VSN----LYQSTQQEIFANHLIHS--TF---ADRVF--FTNSGAES 101 (392)
Q Consensus 35 iD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~--~~~----~~~~~~~~~la~~L~~~--~~---~~~v~--f~~SGseA 101 (392)
+|+.-|..-.. .++|-|..+++++-+.+.. .+. ....+.-.+.+.+|+=. .+ .+|+. =+.|||-|
T Consensus 29 vnLgvGvYrde--~G~~~vl~aVk~Ae~~l~~~~~~k~Ylpi~G~~~f~~~~~~L~fG~~~~~~~~~rv~~vQt~gGTGA 106 (397)
T PRK09257 29 VNLGVGVYKDE--QGRTPVLRAVKKAEARLLETETTKSYLPIEGLAAYNQAVQELLFGADSPAIAAGRVATVQTPGGTGA 106 (397)
T ss_pred EEEEEEEEECC--CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCEEEEECCCCHHH
T ss_conf 77302378999--9891665799999999973789987879787799999999984278755666252588854775368
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHH-HHHHHHHCCCCC
Q ss_conf 356777665432001347860023435465--6543212345532113479-998643332221002-688754101233
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAF--HGRTLATISAGGKLQYLEG-FGPKIEGFDQAKFCD-LQSLKNQISNDT 177 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~y--HG~t~~a~s~s~~~~~~~~-~~p~~~~~~~~~~~d-~~~l~~~~~~~i 177 (392)
.-.+..+.+++ .++++..|+ +..| |-.- +...|-....-+ |.+. ...+.+.. ++.|++.-..+
T Consensus 107 lrl~a~fl~~~-----~p~~~v~is-~PtW~Nh~~I---f~~aGl~v~~Y~y~d~~---t~~ldf~~~~~~L~~a~~gs- 173 (397)
T PRK09257 107 LRVGADFLKRA-----FPDAKVWVS-DPTWPNHRAI---FEAAGLEVKTYPYYDAA---TKGLDFDGMLADLSQAPAGD- 173 (397)
T ss_pred HHHHHHHHHHH-----CCCCEEEEC-CCCCHHHHHH---HHHCCCEEEEEEEECCC---CCCCCHHHHHHHHHHCCCCC-
T ss_conf 99999999985-----899869976-9996203899---99779805776556454---57628999999998289999-
Q ss_pred CCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC---CCCCCC-CCCCCCEE---ECCCCCCC
Q ss_conf 22223-332222112462101232211022345721310110034444555---310111-24545302---10344444
Q gi|254780432|r 178 AAILI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK---LFAYEW-ANVKPDIM---TIAKGMGG 249 (392)
Q Consensus 178 Aavi~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~---~f~~e~-~gi~PDi~---~~gK~l~g 249 (392)
.||+ -+-..--|+ -|+.+-|+.|.++|++.+.+.++|=-+-||| +|- -|+..+ ...-|+++ .++|.+|-
T Consensus 174 -vvlLh~ccHNPTG~-D~t~eqW~~ia~~~~~k~l~p~~D~AYqGf~-sGl~~Da~~iR~f~~~~~e~lva~SfSKnfgL 250 (397)
T PRK09257 174 -VVLLHGCCHNPTGA-DLTPEQWDEVAELLKERGLIPFLDIAYQGFG-DGLEEDAYGLRLFAAAGLELLVASSFSKNFGL 250 (397)
T ss_pred -EEEEECCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEHHCCCCC-CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
T ss_conf -89972566798899-9899999999999996698688840014334-66899999999999728857998403754333
Q ss_pred -CCCCCCC---CCCCCCCCCCCC-C--CCCCCCCCCCCCHHHHHHHHHHHHCCC----CCC-------HHHHHCCHHHHH
Q ss_conf -4344321---000111222223-3--223453211110012334554320122----210-------112100002688
Q gi|254780432|r 250 -GFPIGAC---LATNEVAACMNQ-G--SHGSTYGGNVLAMVLGEKVLNIIQSDG----FLE-------NVINIAKILFEG 311 (392)
Q Consensus 250 -G~P~sav---~~~~~i~~~~~~-~--~~~~T~~gnpl~~aaa~a~L~~l~~~~----l~~-------~~~~~g~~l~~~ 311 (392)
|-=+|++ .-+++..+.+.. . ..-.+|+..|. -.|. -+-.++.+++ +.+ |++.+-+.|.+.
T Consensus 251 Y~eRvG~l~vv~~~~~~~~~v~s~l~~~~R~~~S~PP~-hGA~-iv~~IL~d~~L~~~W~~El~~m~~Ri~~~R~~L~~~ 328 (397)
T PRK09257 251 YGERVGALSVVAEDAEEAARVLSQLKATIRTNYSNPPA-HGAA-IVATILNDPELRAEWEQELAEMRDRIKAMRQLLVEA 328 (397)
T ss_pred CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCH-HHHH-HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 46775038998188889999999999999734588983-8999-999996799999999999999999999999999999
Q ss_pred HHHHHHHC-CCEEEEECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99998867-970755046400999872499899999999689899626898899558986889999999999999999
Q gi|254780432|r 312 LTAIKNRF-PNMFLEVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 312 L~~l~~~~-~~~v~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
|+++.... -+.+ .+..|++.-+ ..+++.+.+.-.+++|.+...| +|-++ -+++..||.+.+.|.++++
T Consensus 329 L~~~~~~~~w~~i--~~q~GmFs~~--gls~~qv~~Lr~~~~IYl~~~G--RInia---GLn~~ni~~vA~AI~~V~~ 397 (397)
T PRK09257 329 LKAKGPDRDFSFI--LRQRGMFSYS--GLTPEQVDRLREEFGIYAVGSG--RINVA---GLNEDNIDYVAKAIAAVLK 397 (397)
T ss_pred HHHHCCCCCCHHH--HHCCCEEECC--CCCHHHHHHHHHHCCEEECCCC--EEEEE---CCCHHHHHHHHHHHHHHHC
T ss_conf 9975899996267--5076605668--9799999999984725146995--68982---0776638999999999859
No 315
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=97.45 E-value=0.00049 Score=46.84 Aligned_cols=196 Identities=16% Similarity=0.313 Sum_probs=111.6
Q ss_pred HHHHHHHHC----CCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHCCCCCCCCEEEECC---CCC---------CCCCCCC
Q ss_conf 268875410----123322223332222112462-10123221102234572131011---003---------4444555
Q gi|254780432|r 165 DLQSLKNQI----SNDTAAILIEPIQGEGGVRKV-PEEFLQQLRKICDDIDALLIFDE---VQT---------GYGRTGK 227 (392)
Q Consensus 165 d~~~l~~~~----~~~iAavi~Epv~g~~G~~~~-~~~~l~~l~~lc~~~g~llI~DE---V~t---------G~GRtG~ 227 (392)
|++++++.+ +++|.||+--+ .+.+| .++=+.++.++|++|++.-|+.- +|+ ++ |.|+
T Consensus 190 dv~~ie~~i~~~g~~~i~cVlSTT-----ScFAPR~~D~i~eiAklC~~~~IpHvVNNAYGlQ~~~~~~~i~~A~-r~GR 263 (444)
T TIGR03531 190 DVEDIERAIEEIGPENILCVLSTT-----SCFAPRSPDDIEEIAKICAKYDIPHVVNNAYGLQSNKYMEKINKAI-KVGR 263 (444)
T ss_pred CHHHHHHHHHHHCCCCEEEEEECC-----CCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHH-HCCC
T ss_conf 999999999982867647998536-----5459999766999999999749983784203661799999999998-6498
Q ss_pred CCCCCCCCCCCCEEE--CCCCCCCCCCCCC-CCCC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH------C--
Q ss_conf 310111245453021--0344444434432-1000--1112222233223453211110012334554320------1--
Q gi|254780432|r 228 LFAYEWANVKPDIMT--IAKGMGGGFPIGA-CLAT--NEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQ------S-- 294 (392)
Q Consensus 228 ~f~~e~~gi~PDi~~--~gK~l~gG~P~sa-v~~~--~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~------~-- 294 (392)
-|.++ .-|.+= .|+|+ ++.+ +++++.+ +.||-|- |.+.-+||.+- .
T Consensus 264 ----------VDa~VQStDKNfl--VPVGGaII~s~d~~~i~~i-----s~~YPGR----AS~sp~lDlfITLLslG~~g 322 (444)
T TIGR03531 264 ----------VDAVVSSTDKNFM--VPVGGAIIYSFDENFIQEI-----SKSYPGR----ASASPSLDVLITLLSMGSKG 322 (444)
T ss_pred ----------CEEEEEECCCCEE--EECCCEEEEECCHHHHHHH-----HHCCCCC----CCCCHHHHHHHHHHHHHHHH
T ss_conf ----------3199970686625--4348748971888999999-----8418997----77740799999999974888
Q ss_pred -CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEC----CCHHHHHHHHHHCCEE---EEECCC------
Q ss_conf -22210112100002688999988679707550464009998724----9989999999968989---962689------
Q gi|254780432|r 295 -DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTV----FSPALLAAKFRDECLL---TAPSSD------ 360 (392)
Q Consensus 295 -~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~----~~~~~~~~~l~~~Gll---~~~~~~------ 360 (392)
.+|++.-+++=++|.++|++++++|.+.+.+++..-.-+++.+. .+...+...|+.+++- +.+.++
T Consensus 323 y~~Ll~eRke~~~~l~~~L~~~a~~~gerlL~t~~N~IS~aitl~~l~~~~~t~lGsmLf~r~VsG~RVV~~~~~k~i~g 402 (444)
T TIGR03531 323 YLELLKERKEMYKYLKELLQKLAERHGERLLDVPENPISSAMTLNTLRPKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGG 402 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEEECC
T ss_conf 99999999999999999999999982987214899950577873667876789999999736887561775899738878
Q ss_pred --------C-------EEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf --------8-------89955898688999999999999999
Q gi|254780432|r 361 --------N-------VVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 361 --------~-------~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
+ -+.++.++-|+++|+|.++++|++++
T Consensus 403 ~~F~~~gsh~~~yp~~Ylt~aaaIG~~~~dvd~f~~rLdk~l 444 (444)
T TIGR03531 403 CEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCC
T ss_conf 775067777677852579988881885899999999986149
No 316
>TIGR02006 IscS cysteine desulfurase IscS; InterPro: IPR010240 This entry represents cysteine deusulphurase (IscS), one of several cysteine desulphurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulphur cluster assembly.; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=97.22 E-value=0.019 Score=36.48 Aligned_cols=332 Identities=20% Similarity=0.230 Sum_probs=177.5
Q ss_pred EEEECHHHHHHHCCCCCCHHHHHHHHHHHHH-CCCCCC-----CCC--CHHHHHHHHHH-HHHCCCC--CCCCCCCCCCC
Q ss_conf 6464102267435787899999999999973-145068-----757--81899999865-2010133--31235655540
Q gi|254780432|r 33 PFLDFASGIAVNSLGHSHPELVAILKSQSEK-LWHVSN-----LYQ--STQQEIFANHL-IHSTFAD--RVFFTNSGAES 101 (392)
Q Consensus 33 ~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~-~~~~~~-----~~~--~~~~~~la~~L-~~~~~~~--~v~f~~SGseA 101 (392)
-|+|+.+. . --.+++.++|.+.+.. ..+.++ .|. .+...+.|+.- .+..+.| .+.|+.+.+|+
T Consensus 5 ~yldy~~t---~---P~~~~v~~~m~~~~~~~g~fGnP~s~sh~fGW~a~~~v~~ar~~~~~~~~~d~~ei~ftsGate~ 78 (404)
T TIGR02006 5 IYLDYAAT---T---PVDKRVAEKMLEYLTEKGNFGNPASRSHKFGWEAEEAVENARNEVAELIGADSREIVFTSGATES 78 (404)
T ss_pred EEEECCCC---C---CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf 36401356---8---64589999999988741566886423433453068899999999999845887407872377530
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 35677766543200134786002343546565432123455321134799986433322210026887541012332222
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
+..|+|=+-.+... ..+.||+... =|-.-+.+. +.--+.+|.-..-.....-.-|++.++..+.++.--+-
T Consensus 79 ~nl~i~G~a~fy~~----k~~h~it~~~-ehk~vl~~~----r~le~~G~~vtyl~~~~~G~~~~~~l~~~~~~~t~lvs 149 (404)
T TIGR02006 79 DNLAIKGVAKFYKS----KGKHIITSKT-EHKAVLDTC----RELEREGFEVTYLEVKEDGLIDLEELKAAIRDDTILVS 149 (404)
T ss_pred HHHHHHHHHHHHHC----CCCEEEEEEH-HHHHHHHHH----HHHHHCCCEEEEEECCCCCCEEHHHHHHHHHCCEEEEE
T ss_conf 24788889999742----3766786400-367899999----98875781689850145662108999987412705787
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC-CCCCCCCCCC
Q ss_conf 333222211246210123221102234572131011003444455531011124545302103444444-3443210001
Q gi|254780432|r 182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGG-FPIGACLATN 260 (392)
Q Consensus 182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG-~P~sav~~~~ 260 (392)
+.-|..+-|++.+ +..+.++|++..+++-+|-.|. +|+. ..+-..+.-|++.++.----| --+|++..++
T Consensus 150 ~m~vnne~G~~~~----~~~i~~~~r~~~~~fh~d~~q~-~Gk~----~~~~~~~~~dl~s~s~hk~yGPkGiGalyv~~ 220 (404)
T TIGR02006 150 VMAVNNEIGVIQD----IAAIGELCRERKVLFHVDAAQS-VGKI----PIDVEELKVDLMSISGHKIYGPKGIGALYVRR 220 (404)
T ss_pred EEEECCCCCHHHH----HHHHHHHHHHCCEEEEEECCCC-CCCE----EEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
T ss_conf 5531144330465----8899987630441476400013-4511----34353431012100123102675521245512
Q ss_pred CCCCCCCC---------CCCCCCCCCCC-CCHHHHHH-HHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 11222223---------32234532111-10012334-554320122210112100002688999988679707550464
Q gi|254780432|r 261 EVAACMNQ---------GSHGSTYGGNV-LAMVLGEK-VLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQ 329 (392)
Q Consensus 261 ~i~~~~~~---------~~~~~T~~gnp-l~~aaa~a-~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~ 329 (392)
+=--.+.. +..++|...+. +++..+.. +-+.+..+. .++..+-+.|.+.++.+.+-+-+--.+-|-.
T Consensus 221 ~Prvr~~~~~~GGG~erG~r~Gtl~~~~ivG~G~~~~~a~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~n~~~~~~~~ 298 (404)
T TIGR02006 221 KPRVRLEALIHGGGHERGMRSGTLPTHQIVGLGEAFRIAKEELAKDT--ARVLKLRDRLLNGIESIEEVYLNGDLEQRVK 298 (404)
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 77335520004887435410244320143210167899999998889--9999999999998744565331211443112
Q ss_pred E-EEEEEEECCCHHHHH---------------------HHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 0-099987249989999---------------------999968989962689889955898688999999999999999
Q gi|254780432|r 330 G-LLIGLKTVFSPALLA---------------------AKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 330 G-l~~~ie~~~~~~~~~---------------------~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
. |-++++.+.....+. --++.-|+----. ...|||.-.-..|+++++..++.+.+.+
T Consensus 299 ~~ln~sf~~veGesl~~a~~~~avssGsaCts~slePsyvlr~lG~~~ela-h~s~r~~~Gr~tt~~e~~~~~~~v~~~~ 377 (404)
T TIGR02006 299 GNLNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELA-HSSIRFTLGRFTTEEEIDYAVKLVKSAV 377 (404)
T ss_pred HHHEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 221012220020478888888753056410013353557887606420122-3222100111210789999999999999
Q ss_pred HHHC
Q ss_conf 9852
Q gi|254780432|r 388 IKLS 391 (392)
Q Consensus 388 ~~L~ 391 (392)
.+|-
T Consensus 378 ~~lr 381 (404)
T TIGR02006 378 DKLR 381 (404)
T ss_pred HHHH
T ss_conf 9886
No 317
>pfam05889 SLA_LP_auto_ag Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). This family consists of several eukaryotic and archaeal proteins which are related to the human soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway. Some archaeal members are annotated as being pyridoxal phosphate-dependent enzymes.
Probab=97.17 E-value=0.0054 Score=40.01 Aligned_cols=201 Identities=14% Similarity=0.239 Sum_probs=109.2
Q ss_pred CHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECC---CCCC--------CCCCCCCCC
Q ss_conf 00268875410-12332222333222211246210123221102234572131011---0034--------444555310
Q gi|254780432|r 163 FCDLQSLKNQI-SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDE---VQTG--------YGRTGKLFA 230 (392)
Q Consensus 163 ~~d~~~l~~~~-~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE---V~tG--------~GRtG~~f~ 230 (392)
.++++...+.+ +++|.||+--+ ...-|=.++=+.++.++|++|++.-|+.- +|+- ..|.|+.
T Consensus 141 ~~~ie~~i~~~g~~~ilcVlsTT----ScFaPR~pD~v~~IAklC~~~~IpHvVNnAYGlQ~~~~~~~i~~a~r~GRV-- 214 (389)
T pfam05889 141 VNDVETIIEEKGEEVILAVLSTT----SCFAPRSPDNVKEIAKICAEYDVPHLVNGAYGIQSEETIRLIAAAHECGRV-- 214 (389)
T ss_pred HHHHHHHHHHHCCCCEEEEEECC----CCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHCCCC--
T ss_conf 99999999983877668998446----656999966799999999974997478430366179999999999863882--
Q ss_pred CCCCCCCCCEEE--CCCCCCCCCCCCC-CCCC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH------C---CC
Q ss_conf 111245453021--0344444434432-1000--1112222233223453211110012334554320------1---22
Q gi|254780432|r 231 YEWANVKPDIMT--IAKGMGGGFPIGA-CLAT--NEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQ------S---DG 296 (392)
Q Consensus 231 ~e~~gi~PDi~~--~gK~l~gG~P~sa-v~~~--~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~------~---~~ 296 (392)
|.++ ..|.+= .|+|+ ++.+ ++.++.+ +.||-|- |.+.-+|+.+. . .+
T Consensus 215 --------Da~VQStDKNfl--VPVGGaIIas~d~~~i~~i-----s~~YPGR----AS~sp~lDlfITLLslG~~gy~~ 275 (389)
T pfam05889 215 --------DAVVQSLDKNFI--VPVGGAIIAAFDESFIQEI-----SEEYPGR----ASARPSKDKLITLLSLGCKAYLA 275 (389)
T ss_pred --------EEEEEECCCCEE--EECCCEEEEECCHHHHHHH-----HHCCCCC----CCCCHHHHHHHHHHHHHHHHHHH
T ss_conf --------189970686625--5348748970888999999-----8418997----77740799999999974888999
Q ss_pred CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEC-------CCHHHHHHHHHHCCEE---EEECCCC--E--
Q ss_conf 210112100002688999988679707550464009998724-------9989999999968989---9626898--8--
Q gi|254780432|r 297 FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTV-------FSPALLAAKFRDECLL---TAPSSDN--V-- 362 (392)
Q Consensus 297 l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~-------~~~~~~~~~l~~~Gll---~~~~~~~--~-- 362 (392)
+++.-+++=++|+++|+++++++...+.++...---+++.+. .+...+...|+.+++- +.+.++. .
T Consensus 276 Ll~eRke~~~~l~e~L~~~a~~~ge~lL~t~~N~IS~aitl~~l~~~~~~~~t~lgs~Lf~r~VsG~RvV~~~~~~~~~~ 355 (389)
T pfam05889 276 LMKEQKEMFPLLRELLKDLAEEVGEQLLDVPHNPISSAMTLETLDEISKKGRTDLGSELFSRRVTGARVVRSSDPFGTIE 355 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCEEE
T ss_conf 99999999999999999999982987513899951688873455666755499999999756787651665688853461
Q ss_pred --------EEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf --------99558986889999999999999999
Q gi|254780432|r 363 --------VRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 363 --------irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
+..+.++-++++|+|.++++|++++.
T Consensus 356 ~~~y~~~Ylt~aaaiG~~~~dVd~f~~rL~k~l~ 389 (389)
T pfam05889 356 GCEYHGRYLNIASAIGMKDEDVDYVIERLDEILE 389 (389)
T ss_pred CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf 6768836789998708868999999999998529
No 318
>TIGR01437 selA_rel pyridoxal phosphate-dependent enzyme, putative; InterPro: IPR006337 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry represents a group of proteins that are related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation. .
Probab=97.15 E-value=0.0098 Score=38.33 Aligned_cols=328 Identities=16% Similarity=0.230 Sum_probs=177.5
Q ss_pred CCEEEECHHHHHHHCCCCC--CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH-HHHHHHCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 9764641022674357878--9999999999997314506875781899999-865201013331235655540356777
Q gi|254780432|r 31 GIPFLDFASGIAVNSLGHS--HPELVAILKSQSEKLWHVSNLYQSTQQEIFA-NHLIHSTFADRVFFTNSGAESVECAIK 107 (392)
Q Consensus 31 G~~yiD~~~g~~~~~lGh~--~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la-~~L~~~~~~~~v~f~~SGseA~e~Aik 107 (392)
-++.|..++- .+.||=+ -|+|++|.+...+.... -..-.+-+ +.+....+.+-.+.+.|-|-.+=.+|-
T Consensus 8 lk~ViNa~Gk--MTiLGvs~Vs~ev~~a~~~~~~~F~e------m~~ls~~tGe~~ar~lgvEdayIts~AsAGia~~vA 79 (391)
T TIGR01437 8 LKRVINAIGK--MTILGVSKVSDEVLEATKYVSDIFIE------MDDLSRKTGEYIARRLGVEDAYITSGASAGIALAVA 79 (391)
T ss_pred CEEEEECCCC--EEECCCCHHHHHHHHHHHHHHHHCEE------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 2036723452--13536640369999998756551010------899999999999988443067889878889999999
Q ss_pred H-------HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 6-------6543200134786002343546565432123455321134799-------9864333222100268875410
Q gi|254780432|r 108 T-------ARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGF-------GPKIEGFDQAKFCDLQSLKNQI 173 (392)
Q Consensus 108 l-------ar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~-------~p~~~~~~~~~~~d~~~l~~~~ 173 (392)
- ||.++......+++..|++..+. +..|+.|. ||..-.+-...+..-+.+|..+
T Consensus 80 ali~~g~~ar~~~~~i~e~g~~~~vv~~rgH------------~vdyg~PV~~~i~~gGg~ivE~G~~n~~s~~~lE~~I 147 (391)
T TIGR01437 80 ALISKGTRARVIKDIIEEKGRKREVVLQRGH------------NVDYGAPVEDLIALGGGRIVEVGDENLVSEESLEETI 147 (391)
T ss_pred HHHCCCCCCEEECCHHHCCCCEEEEEEECCC------------CCCCCCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHH
T ss_conf 9751676320110103203340067862787------------4567880899996189948997788875678999999
Q ss_pred CCCCCCCCC----CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEC--CCCC
Q ss_conf 123322223----3322221124621012322110223457213101100344445553101112454530210--3444
Q gi|254780432|r 174 SNDTAAILI----EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTI--AKGM 247 (392)
Q Consensus 174 ~~~iAavi~----Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~--gK~l 247 (392)
.++.++++. |.+|-. +. .| +..+.+++.+|+++||+|=-.- .---+.++.|-..| .|+|.+ +|.|
T Consensus 148 ~~kt~aiLyvksh~~vqk~-ml-~P----~~~~~~vA~~~~vPlIVDAAAe-iPP~edL~~y~~~G--aDlViYSGaKa~ 218 (391)
T TIGR01437 148 KEKTAAILYVKSHHLVQKD-ML-LP----VEEVIRVAQSYKVPLIVDAAAE-IPPEEDLTRYLKAG--ADLVIYSGAKAL 218 (391)
T ss_pred HHHHHHHHHHHHHCCCCCC-CC-CC----HHHHHHHHHHCCCCEEEECCCC-CCCHHHHHHHHHHC--CCEEEECCHHHC
T ss_conf 7734675556532135766-66-63----8999999975689889862568-98801468999716--875553203450
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCCCC---------CCCCCCC-----CHHHHHHHHHHHHC---CCCCCHHHHHCCHHH
Q ss_conf 44434-432100011122222332234---------5321111-----00123345543201---222101121000026
Q gi|254780432|r 248 GGGFP-IGACLATNEVAACMNQGSHGS---------TYGGNVL-----AMVLGEKVLNIIQS---DGFLENVINIAKILF 309 (392)
Q Consensus 248 ~gG~P-~sav~~~~~i~~~~~~~~~~~---------T~~gnpl-----~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~ 309 (392)
+| .. -|-+++|+++.+..+....++ .|=|-|. .+.+-..++|.+.+ +++..+.+.+-+-+.
T Consensus 219 ~g-psnsGl~vGrK~~I~~~~~~g~gseenGPDGtrvfIgRaMKIgKe~ivg~v~AvE~yl~~~~e~~~~k~~~~l~p~a 297 (391)
T TIGR01437 219 EG-PSNSGLVVGRKDYIAAAKSQGKGSEENGPDGTRVFIGRAMKIGKENIVGLVAAVERYLTFNDEDWLRKQRSRLDPIA 297 (391)
T ss_pred CC-CCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 46-43263233008899999862887656689865688732651036899999999999851687267899999843699
Q ss_pred HHHHHHHHHCCCEEEEECC---CEEE-EEEEEC-----CCHHHHHHHHHHCCE--EEEE--CCCCEEEECCCCCCCHHHH
Q ss_conf 8899998867970755046---4009-998724-----998999999996898--9962--6898899558986889999
Q gi|254780432|r 310 EGLTAIKNRFPNMFLEVRG---QGLL-IGLKTV-----FSPALLAAKFRDECL--LTAP--SSDNVVRILPPLTITAEEI 376 (392)
Q Consensus 310 ~~L~~l~~~~~~~v~~vRG---~Gl~-~~ie~~-----~~~~~~~~~l~~~Gl--l~~~--~~~~~irl~Ppl~it~~ei 376 (392)
+-+.++...+..++.|--| +-.. ..++.. -+.+.++.+|+..-+ +++. ..+..+.|-|- ++.++|+
T Consensus 298 ~aIs~i~~l~a~iv~D~agnhPR~i~r~rV~v~~~~~Gl~A~eV~~~Lk~~~~aIYtr~YQ~~~G~~~ldpr-~v~e~e~ 376 (391)
T TIGR01437 298 EAISDIDDLMAKIVQDEAGNHPRDIYRARVKVDAEEGGLSADEVISRLKAERVAIYTREYQLLDGVLELDPR-SVKEDEM 376 (391)
T ss_pred HHHHHHHHCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCEEEECCC-CCCCCCH
T ss_conf 998524101123567688988854368888982222476789999985079995002245544885887661-1361416
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999998
Q gi|254780432|r 377 HEGLERIERTAIK 389 (392)
Q Consensus 377 d~~i~~l~~al~~ 389 (392)
..++++|.+-..+
T Consensus 377 ~~Iv~rL~eI~~~ 389 (391)
T TIGR01437 377 ALIVDRLSEIVEK 389 (391)
T ss_pred HHHHHHHHHHHHH
T ss_conf 8999989999862
No 319
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=96.94 E-value=0.0024 Score=42.36 Aligned_cols=243 Identities=15% Similarity=0.190 Sum_probs=128.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 33123565554035677766543200134786002343546565432123455321134799986433322210026887
Q gi|254780432|r 90 DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSL 169 (392)
Q Consensus 90 ~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l 169 (392)
.++..+|--|.|+-++| +|. ..++++ |+.+-... .+.|...+. -.+.+..-....+++++
T Consensus 72 e~~v~~NRTSsailAtI-laL------~~~~~~-Vvh~vPe~----------paHPSI~rs--c~lagaey~E~d~~~el 131 (346)
T TIGR03576 72 EKILVFNRTSSAILATI-LAL------EPPGRK-VVHYLPEK----------PAHPSIPRS--CKLAGAEYFESDELSEL 131 (346)
T ss_pred CEEEEECCCHHHHHHHH-HHH------CCCCCE-EEEECCCC----------CCCCCCCCC--CEECCCCEEECCCHHHH
T ss_conf 25777456269999999-983------578870-58978787----------899973020--05148714750667762
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC-CCCCCCCEEE--CCCC
Q ss_conf 541012332222333222211246210123221102234572131011003444455531011-1245453021--0344
Q gi|254780432|r 170 KNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYE-WANVKPDIMT--IAKG 246 (392)
Q Consensus 170 ~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e-~~gi~PDi~~--~gK~ 246 (392)
... +...-+++-+.- + -....+.+-++++.++|+..|++..+||- .|- |.=..+++- ..+.-.|+++ +-|-
T Consensus 132 ~~~--d~~slvviTgst-m-d~~vi~~d~~k~vI~~Ak~~~a~V~vDDA-sGA-RvR~L~gq~~al~lGADLvVTS~DKl 205 (346)
T TIGR03576 132 KKI--DGTSLVVITGST-M-DLKVVSEEDLKRVIKQAKSKEAIVLVDDA-SGA-RVRRLYGQPPALDLGADLVVTSTDKL 205 (346)
T ss_pred CCC--CCCCEEEEECCC-C-CCEECCHHHHHHHHHHHHHCCCEEEEECC-CCC-CHHHHCCCCCCCCCCCCEEEEEHHHC
T ss_conf 767--887189993787-7-73004578899999998746984998548-887-51665199986555642688400212
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf 44443443210001112222233223453211110012334554320122210112100002688999988679707550
Q gi|254780432|r 247 MGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEV 326 (392)
Q Consensus 247 l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v 326 (392)
|.| .-.|-+.++.++.+.+...........-|...||+..+|+.+.-+++.+..++..+.....++.+ + + +-
T Consensus 206 M~G-PR~GlLaG~~eLV~ki~~~~~~~GlEaq~Pi~aAmv~aLe~f~~~~l~~a~~r~~~~~l~~~~~l-----~-~-e~ 277 (346)
T TIGR03576 206 MDG-PRGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL-----N-V-ER 277 (346)
T ss_pred CCC-CCCCEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC-----C-C-CC
T ss_conf 667-75411228889999999998752777784159999999970799999999999999887653035-----7-4-32
Q ss_pred CCCEEEE-EEEECCCHHHHHHHHHHCCEEEEEC-----CCCEEEEC
Q ss_conf 4640099-9872499899999999689899626-----89889955
Q gi|254780432|r 327 RGQGLLI-GLKTVFSPALLAAKFRDECLLTAPS-----SDNVVRIL 366 (392)
Q Consensus 327 RG~Gl~~-~ie~~~~~~~~~~~l~~~Gll~~~~-----~~~~irl~ 366 (392)
...|+++ .++...--..-...+.+.|+++.+. ...++||-
T Consensus 278 TptGf~ik~~~~e~~~~~~~~LL~~ygIiTIta~GmpgasktlR~d 323 (346)
T TIGR03576 278 TPTGFVIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFD 323 (346)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEE
T ss_conf 7853798565688889999999997694898347788876326876
No 320
>TIGR01814 kynureninase kynureninase; InterPro: IPR010111 This entry describes kynureninase, it is a pyridoxal-5'-phosphate (PLP)-dependent enzyme that catalyzes the hydrolytic cleavage of L-kynurenine to anthranilic acid and L-alanine. Kynurinine is a Trp breakdown product and a precursor for NAD. This reaction is a key step in the catabolism of L-tryptophan by Pseudomonas fluorescens and some other bacteria (1). In fungi and vertebrates, kynurenine is first hydroxylated to 3-hydroxykynurenine, which is the preferred substrate of kynureninase in those organisms, resulting in 3-hydroxyanthranilate and L-alanine. Sequence alignment with other PLP-dependent enzymes indicated that kynureninase is in subgroup IVa of the aminotransferases, along with nifS, CsdB, and serine-pyruvate aminotransferase, which suggests that kynureninase has an aminotransferase fold .; GO: 0030170 pyridoxal phosphate binding, 0030429 kynureninase activity, 0006569 tryptophan catabolic process, 0009435 NAD biosynthetic process, 0005737 cytoplasm.
Probab=96.93 E-value=0.0079 Score=38.92 Aligned_cols=330 Identities=15% Similarity=0.120 Sum_probs=189.4
Q ss_pred HCCCCCCHHHHHHHHHHHHH----CCCCCC----CCCCHHHHHHHHH---HHH-HCCC--CCCCCCCCCCCCHHHHHHHH
Q ss_conf 35787899999999999973----145068----7578189999986---520-1013--33123565554035677766
Q gi|254780432|r 44 NSLGHSHPELVAILKSQSEK----LWHVSN----LYQSTQQEIFANH---LIH-STFA--DRVFFTNSGAESVECAIKTA 109 (392)
Q Consensus 44 ~~lGh~~p~i~~a~~~q~~~----~~~~~~----~~~~~~~~~la~~---L~~-~~~~--~~v~f~~SGseA~e~Aikla 109 (392)
++||-.+....+++++.+|+ +....+ -.....|..+-+. |.+ ...+ +.|..+||=| .|=--|-.+
T Consensus 44 NSLal~pk~~~~~~~~~lD~W~~~~~~~~~khPee~~~~pW~~~~~~~~~l~~~vlvA~~~evv~~nslT-~NLh~ll~~ 122 (444)
T TIGR01814 44 NSLALMPKSAREALKEILDKWAKLAVESHNKHPEEVGKVPWFTLDEALLKLLADVLVAQEKEVVVMNSLT-VNLHKLLAS 122 (444)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHCCCCHHEECCCCCEEEECHHH-HHHHHHHHH
T ss_conf 4112368999999999987689999875205710036788620345353143100111665366300433-889999998
Q ss_pred HHHHH-CCCCCCCCCCCCCCCCCCCCCCCCCC---CC--CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 54320-01347860023435465654321234---55--32113479998643332221002688754101233222233
Q gi|254780432|r 110 RRYHY-MAGKTNKFRIVTFEGAFHGRTLATIS---AG--GKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIE 183 (392)
Q Consensus 110 r~~~~-~~g~t~r~~ii~~~~~yHG~t~~a~s---~s--~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~E 183 (392)
. |.. +-..+.|.+|+.=.++|=-.....-+ +- ....+.--..|.. +-......|+....+...|+||-|++-
T Consensus 123 F-y~pqredt~~R~kIL~E~~aFPSD~Ya~e~Q~~L~g~~~e~~l~~~~p~~-~e~tLr~~di~~~iE~~~D~~A~v~l~ 200 (444)
T TIGR01814 123 F-YKPQREDTEKRTKILLEAKAFPSDLYAIESQLRLHGLEPEEHLVQVEPRE-AEETLRLEDILDTIEKNGDEIALVLLS 200 (444)
T ss_pred H-CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECC-CCCHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 7-07542477334575651678872799999997467987344126774223-442110788999998538978999847
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC-CCCCCCCCCCCCCE--EECCCCCCCCC-CCCCCCCC
Q ss_conf 3222211246210123221102234572131011003444455-53101112454530--21034444443-44321000
Q gi|254780432|r 184 PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG-KLFAYEWANVKPDI--MTIAKGMGGGF-PIGACLAT 259 (392)
Q Consensus 184 pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG-~~f~~e~~gi~PDi--~~~gK~l~gG~-P~sav~~~ 259 (392)
-||--.|=..- ++.+.+..++-+.++|+|=-=+ + | -..-=+.||| |+ .|-=|=|+.|- -+++..+.
T Consensus 201 ~V~Y~TGQ~fD----m~~~t~~a~~~~~~~vfDLAHa-~---~NvPl~LH~w~V--DFA~WC~YKYLNa~pg~v~~~F~h 270 (444)
T TIGR01814 201 GVQYYTGQLFD----MRAITRAAHKRGAIVVFDLAHA-V---ANVPLDLHDWGV--DFACWCSYKYLNASPGIVVGAFVH 270 (444)
T ss_pred CCCCCHHHHHH----HHHHHHHHHCCCCEEEEEHHHH-H---CCCCCCCCCCCC--CEEEECCCCCCCCHHHHHHHHHCC
T ss_conf 84430236789----9999999708976599602221-1---076322578888--777884660116113555123102
Q ss_pred CCCC-C-------CCC----------------CCCCCCCCCCCCCCHHHHHHH-HHHHHCCCCCCHHHHHCCHHHHHHHH
Q ss_conf 1112-2-------222----------------332234532111100123345-54320122210112100002688999
Q gi|254780432|r 260 NEVA-A-------CMN----------------QGSHGSTYGGNVLAMVLGEKV-LNIIQSDGFLENVINIAKILFEGLTA 314 (392)
Q Consensus 260 ~~i~-~-------~~~----------------~~~~~~T~~gnpl~~aaa~a~-L~~l~~~~l~~~~~~~g~~l~~~L~~ 314 (392)
++-. + .+. ++.-+.=.+.-|+-..|++.+ ||+..+-++ +.+|+++-.|-+=|.+
T Consensus 271 ~~~~~~~~~~~~lwWwh~~~~rF~m~~~~~~~~g~~~~~~snPpv~~~a~L~sSL~~F~q~~m-~~lRkKS~~LTdyl~~ 349 (444)
T TIGR01814 271 EKHAHEELPRLALWWWHARPKRFKMENTLVLRPGAAAFRLSNPPVLSVAALRSSLDLFDQASM-EALRKKSLLLTDYLEE 349 (444)
T ss_pred HHHHCCCCHHCCCCCCCCCCHHHCCCHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH
T ss_conf 244114200025532457634324411025564202433058768889888854776630584-8999999888778999
Q ss_pred HHHHCCC-----------EEE------EECCCEEEEEEEEC---CCHHHHHHHHHHCCEEEEECCCCEEEECC-CCCCCH
Q ss_conf 9886797-----------075------50464009998724---99899999999689899626898899558-986889
Q gi|254780432|r 315 IKNRFPN-----------MFL------EVRGQGLLIGLKTV---FSPALLAAKFRDECLLTAPSSDNVVRILP-PLTITA 373 (392)
Q Consensus 315 l~~~~~~-----------~v~------~vRG~Gl~~~ie~~---~~~~~~~~~l~~~Gll~~~~~~~~irl~P-pl~it~ 373 (392)
|.+..-. .+. +...+|.=+++++. .+...+.+.+..+|+++-...+|+|||+| ||.-+=
T Consensus 350 L~~~~~~~~~~~rie~~k~~~~I~TP~~~~~Rgcqls~~~~~~~~~~~~~~~~L~~r~vv~D~R~P~vIR~APvpLYn~F 429 (444)
T TIGR01814 350 LIKARCAYKKALRIETLKLVLTIITPEDHAQRGCQLSLEFPSDRKEDAAVFQALIKRGVVIDFREPSVIRLAPVPLYNTF 429 (444)
T ss_pred HHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCEEEECCCCCCCE
T ss_conf 99852258512320357856897378881215543789707888703578999986796330258883276276453655
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780432|r 374 EEIHEGLERIERTA 387 (392)
Q Consensus 374 ~eid~~i~~l~~al 387 (392)
.|+-+++++|++++
T Consensus 430 ~DVy~~V~~L~~~~ 443 (444)
T TIGR01814 430 VDVYDAVEVLEEIL 443 (444)
T ss_pred EHHHHHHHHHHHHH
T ss_conf 04989999999994
No 321
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=96.69 E-value=0.058 Score=33.27 Aligned_cols=194 Identities=14% Similarity=0.180 Sum_probs=109.7
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC------CCCE-EE--CCCCCCC-
Q ss_conf 223332222112462101232211022345721310110034444555310111245------4530-21--0344444-
Q gi|254780432|r 180 ILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV------KPDI-MT--IAKGMGG- 249 (392)
Q Consensus 180 vi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi------~PDi-~~--~gK~l~g- 249 (392)
++-.+-..--|+. |+.+=|..|.++-++.+.+-++|=-.-||+.-. --+.+++ -|-+ +| +||.+|=
T Consensus 176 LLH~CcHNPTG~D-~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~Gl---eeDa~~lR~~a~~~~~~lva~S~SKnfgLY 251 (396)
T COG1448 176 LLHGCCHNPTGID-PTEEQWQELADLIKERGLIPFFDIAYQGFADGL---EEDAYALRLFAEVGPELLVASSFSKNFGLY 251 (396)
T ss_pred EEECCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCH---HHHHHHHHHHHHHCCCEEEEEHHHHHHHHH
T ss_conf 9836778988999-999999999999997698236632444421246---778999999997298589971000124434
Q ss_pred CC---CCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCHHHH--HHH-----HHHHHCC---CCCCHHHHHCCHHHHHHH
Q ss_conf 43---44321000111222223---32234532111100123--345-----5432012---221011210000268899
Q gi|254780432|r 250 GF---PIGACLATNEVAACMNQ---GSHGSTYGGNVLAMVLG--EKV-----LNIIQSD---GFLENVINIAKILFEGLT 313 (392)
Q Consensus 250 G~---P~sav~~~~~i~~~~~~---~~~~~T~~gnpl~~aaa--~a~-----L~~l~~~---~l~~~~~~~g~~l~~~L~ 313 (392)
|- .+++|.-++++.+.+.. ...-.+|+. |-+--|+ ..+ |+...+. ...+|+.++-+.|.+.|+
T Consensus 252 gERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySn-PP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~ 330 (396)
T COG1448 252 GERVGALSVVAEDAEEADRVLSQLKAIIRTNYSN-PPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALK 330 (396)
T ss_pred HHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 3002315888278899999999999999863589-841239999999489999999999999999999999999999998
Q ss_pred HHHHHC-CCEEEEECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 998867-97075504640099987249989999999968989962689889955898688999999999999999
Q gi|254780432|r 314 AIKNRF-PNMFLEVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 314 ~l~~~~-~~~v~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
+....+ -+.+ .+.+|++--. ..+++.+.+.--+.+|++...| +|.++ -+++..|+.+.+.|.+++
T Consensus 331 ~~~~~~~f~~i--~~Q~GMFsy~--Gls~~QV~rLree~~IY~v~sG--Ri~va---Gl~~~ni~~va~ai~~v~ 396 (396)
T COG1448 331 ALGAPRNFDFI--ISQRGMFSYT--GLSPEQVDRLREEFGIYLVASG--RINVA---GLNTSNIDYVAKAIAAVL 396 (396)
T ss_pred HHCCCCCCCHH--HHCCCEEECC--CCCHHHHHHHHHHCCEEEECCC--EEEEC---CCCHHHHHHHHHHHHHHC
T ss_conf 62788662247--5467524458--9999999999985667995378--14653---687440899999998649
No 322
>KOG0634 consensus
Probab=96.65 E-value=0.067 Score=32.86 Aligned_cols=202 Identities=15% Similarity=0.159 Sum_probs=121.1
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC----------CCCCCCC--CCCCC------------E
Q ss_conf 2222112462101232211022345721310110034444555----------3101112--45453------------0
Q gi|254780432|r 185 IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK----------LFAYEWA--NVKPD------------I 240 (392)
Q Consensus 185 v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~----------~f~~e~~--gi~PD------------i 240 (392)
.|.--|. ..+.+-=+++.+|++||+++.|-||+.- |=.-+. .+..+.+ .+.|+ +
T Consensus 213 gqNPTG~-tls~errk~iy~LArKyDfLIVeDdpYy-~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~ 290 (472)
T KOG0634 213 GQNPTGN-TLSLERRKKIYQLARKYDFLIVEDDPYY-FLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRN 290 (472)
T ss_pred CCCCCCC-CCCHHHHHHHHHHHHHCCEEEEECCCCC-EEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEC
T ss_conf 8899887-4689999999999987678999247631-2433666887664675524788988644773236666617863
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHH----HHHHH
Q ss_conf 21034444443443210001112222233223453211110012334554320122210112100002688----99998
Q gi|254780432|r 241 MTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEG----LTAIK 316 (392)
Q Consensus 241 ~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~----L~~l~ 316 (392)
-+|+|-++-|.-+|-+.+..-..+.+-...-..|-+-+-+.-..--+.|+..-++++++.+.++......+ |.++.
T Consensus 291 dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~ 370 (472)
T KOG0634 291 DSFSKIIAPGLRLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALD 370 (472)
T ss_pred CCHHHHHCCCCEEEEEECCHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 41244416763157863577788888612031003866410999999999988888999999999999888999999999
Q ss_pred HHCCCEEE--EECCCEEEEEEEEC-------CC----HHHHHHHHHHCCEEEEEC----------CCC-EEEECCCCCCC
Q ss_conf 86797075--50464009998724-------99----899999999689899626----------898-89955898688
Q gi|254780432|r 317 NRFPNMFL--EVRGQGLLIGLKTV-------FS----PALLAAKFRDECLLTAPS----------SDN-VVRILPPLTIT 372 (392)
Q Consensus 317 ~~~~~~v~--~vRG~Gl~~~ie~~-------~~----~~~~~~~l~~~Gll~~~~----------~~~-~irl~Ppl~it 372 (392)
+-.|..+- -+--.|+++=|+++ .. ...+...+.++||.+.+. .++ ..|++-++ .+
T Consensus 371 kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~-a~ 449 (472)
T KOG0634 371 KYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAF-AE 449 (472)
T ss_pred HHCCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCEEEECCCCCCCCCEEEEEEEC-CC
T ss_conf 75877706986687646999992664346556667999999999997791893374368767657775259999620-89
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998
Q gi|254780432|r 373 AEEIHEGLERIERTAIK 389 (392)
Q Consensus 373 ~~eid~~i~~l~~al~~ 389 (392)
.+++++++++|-.+|.+
T Consensus 450 ~e~l~~g~~rf~~~ike 466 (472)
T KOG0634 450 PEKLDEGIERFGSVIKE 466 (472)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 88999999999999998
No 323
>pfam00282 Pyridoxal_deC Pyridoxal-dependent decarboxylase conserved domain.
Probab=96.52 E-value=0.002 Score=42.77 Aligned_cols=177 Identities=18% Similarity=0.093 Sum_probs=89.4
Q ss_pred CHHHHHHH----HHHHHHCCCCC---------CCCCCCCCCCHHHHHHHHHHHHHCC----C-CCCCCCCCCCCCCCCCC
Q ss_conf 81899999----86520101333---------1235655540356777665432001----3-47860023435465654
Q gi|254780432|r 73 STQQEIFA----NHLIHSTFADR---------VFFTNSGAESVECAIKTARRYHYMA----G-KTNKFRIVTFEGAFHGR 134 (392)
Q Consensus 73 ~~~~~~la----~~L~~~~~~~~---------v~f~~SGseA~e~Aiklar~~~~~~----g-~t~r~~ii~~~~~yHG~ 134 (392)
+|...+++ +.|++..+++. =.|+++||+||-.|+..||...... | ..+|..|++-+.+ |=.
T Consensus 74 sPa~t~lE~~vi~wl~~l~g~p~~~~~~~~~~G~~tsGgs~anl~al~~AR~~~~~~~~~~g~~~~~~vi~~S~~a-H~S 152 (370)
T pfam00282 74 SPACTELENVVMDWLAKMLGLPKEFLGSGQGGGVLQGGSSESNLLALLAARTKWIRRMKAAGKPLGKLVAYTSDQA-HSS 152 (370)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC-HHH
T ss_conf 8268999999999999996686444168888648736478999999999999999987641798687499976632-799
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC------CCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 32123455321134799986433322210026887541012332------222333222211246210123221102234
Q gi|254780432|r 135 TLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTA------AILIEPIQGEGGVRKVPEEFLQQLRKICDD 208 (392)
Q Consensus 135 t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iA------avi~Epv~g~~G~~~~~~~~l~~l~~lc~~ 208 (392)
-.=+..+.| ++...-.++..-.-|.++|++.+.++.+ +|+.---....|.+=+ +++|.++|++
T Consensus 153 v~Kaa~~lG-------lg~~~V~~d~~~~m~~~~L~~~i~~~~~~g~~p~~VvataGTT~tGaiD~----l~~i~~i~~~ 221 (370)
T pfam00282 153 IEKAALIAG-------VELREIPTDENGKMRGMDLEKAIEEDKENGLIPFFVCATLGTTGSGAFDP----LQELGDICNK 221 (370)
T ss_pred HHHHHHHCC-------CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC----HHHHHHHHHH
T ss_conf 999999749-------98369536898882999999999999867997449998637717713478----9999999998
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCC-CCCEEE--CCCCCCCCCCCCCCCCCCC
Q ss_conf 5721310110034444555310111245-453021--0344444434432100011
Q gi|254780432|r 209 IDALLIFDEVQTGYGRTGKLFAYEWANV-KPDIMT--IAKGMGGGFPIGACLATNE 261 (392)
Q Consensus 209 ~g~llI~DEV~tG~GRtG~~f~~e~~gi-~PDi~~--~gK~l~gG~P~sav~~~~~ 261 (392)
||+.+-+|=-.-|+......+-.-..|+ ..|=++ .-|-+.--|++|+++.++.
T Consensus 222 ~~lWlHVDaA~GG~~~l~~~~r~~~~gie~aDSi~~d~HK~l~~P~~~s~~l~rd~ 277 (370)
T pfam00282 222 YDLWLHVDAAYAGSAFICPEFRHWLFGIERADSFSFNPHKWMLVLLDCSALWVRDK 277 (370)
T ss_pred CCCEEEEEHHHHHHHHHCHHHHHHHCCCCCCCEEEECCHHCCCCCCCEEEEEEECH
T ss_conf 39808842333347882985577756987785797780550187887589999487
No 324
>pfam02347 GDC-P Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is:- Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2
Probab=96.51 E-value=0.054 Score=33.50 Aligned_cols=308 Identities=18% Similarity=0.165 Sum_probs=147.5
Q ss_pred HHHHHHHCCCCCCHHHHH-HHHHHHHHC-CCCCC-CCCCHH-H------HHHHHHHHHHCCCCC--CCCCCCCCCCHHHH
Q ss_conf 022674357878999999-999999731-45068-757818-9------999986520101333--12356555403567
Q gi|254780432|r 38 ASGIAVNSLGHSHPELVA-ILKSQSEKL-WHVSN-LYQSTQ-Q------EIFANHLIHSTFADR--VFFTNSGAESVECA 105 (392)
Q Consensus 38 ~~g~~~~~lGh~~p~i~~-a~~~q~~~~-~~~~~-~~~~~~-~------~~la~~L~~~~~~~~--v~f~~SGseA~e~A 105 (392)
.|-+|.-...|--|.+++ .+. ++. +++.+ -|+.+. + -+|-..+++.+++|- +-....+|-+-|++
T Consensus 67 ~sfiG~G~y~h~vP~vi~~~i~---~r~efyTaYTPYQpEiSQG~LqalfefQtmi~eLTGmdvaNASlyD~aTA~aEA~ 143 (429)
T pfam02347 67 KSFIGMGYYDTIIPAVILRNIL---ENPEWYTQYTPYQPEISQGRLEALLNFQTMVCDLTGLDVANASLLDEGTAAAEAM 143 (429)
T ss_pred CCCCCCCCCCCCCCCHHHHHHC---CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 6315787779765815646540---4766430369998154437999999999999998588756876666788999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 77665432001347860023435465654321234553211347999864333222100268875410123322223332
Q gi|254780432|r 106 IKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPI 185 (392)
Q Consensus 106 iklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv 185 (392)
.||.+.. +.+|.+|+. ..+-|-.+...+. .+.++.+ -.+..++..+ ......+++||++++--
T Consensus 144 -~ma~r~~----k~~~~~vlv-~~~~hP~~~~Vl~-----T~~~~~~---i~i~~~~~~~---~~~~~~~~~a~v~~q~P 206 (429)
T pfam02347 144 -ALAARIS----KGKKKKFVV-DKDCHPQTLDVLR-----TRAKGFG---IEIVEVDLTE---EGFSDEGDVFGVLVQYP 206 (429)
T ss_pred -HHHHHHH----CCCCCEEEE-ECCCCHHHHHHHH-----HHHHCCC---CEEEEECCCC---CCCCCCCCEEEEEEECC
T ss_conf -9987651----578877998-2887831899999-----7542279---5799967200---14555547689999379
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCEEEE--CCCCCCCCCCCCCCCCCCCCCCCCEE-----ECCCCCCCCCCCCC-CC
Q ss_conf 222112462101232211022345721310--11003444455531011124545302-----10344444434432-10
Q gi|254780432|r 186 QGEGGVRKVPEEFLQQLRKICDDIDALLIF--DEVQTGYGRTGKLFAYEWANVKPDIM-----TIAKGMGGGFPIGA-CL 257 (392)
Q Consensus 186 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~--DEV~tG~GRtG~~f~~e~~gi~PDi~-----~~gK~l~gG~P~sa-v~ 257 (392)
-.- |.+.. ++.+.++|+++|+++|+ |=+.-|.=++ -..|| .||+ .||=.++-|=|-.+ +.
T Consensus 207 n~~-G~ied----~~~i~~~~h~~gal~iv~~dplsL~ll~~-----Pg~~G--aDI~vG~~Q~lGipm~fGGP~~gf~a 274 (429)
T pfam02347 207 NTE-GRIED----YKELIEIAHQHGSLVVVAADLLALTILKP-----PGEFG--ADIVVGSAQRFGVPMGYGGPHAGFFA 274 (429)
T ss_pred CCC-CCEEC----CHHHHHHHHHCCCEEEEEECHHHHCCCCC-----CCCCC--CCEEEECCCCCCCCCCCCCCCCCHHH
T ss_conf 998-31723----49999998645966999807799607689-----76566--33797257657888788988200154
Q ss_pred CCCCCCCCCCCCC----------------------C-------CCCCCCCCCCHHHHHHHHHHHHCCC---CCCHHHHHC
Q ss_conf 0011122222332----------------------2-------3453211110012334554320122---210112100
Q gi|254780432|r 258 ATNEVAACMNQGS----------------------H-------GSTYGGNVLAMVLGEKVLNIIQSDG---FLENVINIA 305 (392)
Q Consensus 258 ~~~~i~~~~~~~~----------------------~-------~~T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g 305 (392)
++++..-.+.... | ++.=+...+-..+|...+-++=.++ +.+++..+.
T Consensus 275 ~~~~~~R~~PGRivG~t~D~~G~~~~~ltLqtREQHIrReKAtSNICTnqaL~A~~a~~Y~~~~Gp~GL~~iA~~~~~~A 354 (429)
T pfam02347 275 VKEELKRKMPGRIVGVSKDANGKRALRLALQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPKGLKEIARRIHSLT 354 (429)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf 48889974997644677588998733654124343033444203465008999999999999869788999999999999
Q ss_pred CHHHHHHHHHHHHCCCEEEEECCCEEEE--EEEECC-CHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHH
Q ss_conf 0026889999886797075504640099--987249-9899999999689899626898899558986889999999999
Q gi|254780432|r 306 KILFEGLTAIKNRFPNMFLEVRGQGLLI--GLKTVF-SPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLER 382 (392)
Q Consensus 306 ~~l~~~L~~l~~~~~~~v~~vRG~Gl~~--~ie~~~-~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~ 382 (392)
.++.++|.++ +. + .+.+.-++- .++... ..+.+.++....|+-......+.+-++..=+-|++|||+++++
T Consensus 355 ~yl~~~L~~~----~g-~-~~~~~~Ffd~v~~~~~~~~~~~l~~~~i~~G~~l~~~~~~~~li~vtE~~T~edId~Lv~~ 428 (429)
T pfam02347 355 LYLAKGLKKL----AG-H-ELDHDHFFDTLKITVEDRAAEELLKRAEKGGINLRYVDLGTVGIALDETTTKEDVDALLKV 428 (429)
T ss_pred HHHHHHHHHC----CC-E-ECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 9999999866----99-7-6679996215999628278999999999779973653899499996479999999999975
Q ss_pred H
Q ss_conf 9
Q gi|254780432|r 383 I 383 (392)
Q Consensus 383 l 383 (392)
|
T Consensus 429 f 429 (429)
T pfam02347 429 F 429 (429)
T ss_pred C
T ss_conf 9
No 325
>KOG1383 consensus
Probab=96.44 E-value=0.089 Score=32.07 Aligned_cols=339 Identities=19% Similarity=0.169 Sum_probs=162.8
Q ss_pred ECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCC-CCCCCCCCH--HHHHHHHHHHHHCC--CCCC-CCCCCCCCC
Q ss_conf 67997646410226743578789999999999997314-506875781--89999986520101--3331-235655540
Q gi|254780432|r 28 SENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLW-HVSNLYQST--QQEIFANHLIHSTF--ADRV-FFTNSGAES 101 (392)
Q Consensus 28 d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~-~~~~~~~~~--~~~~la~~L~~~~~--~~~v-~f~~SGseA 101 (392)
+.||+..+-..|+ ++-.+ +|+..+-+.+..+++. ..+..|... .+.+.-..++.... .+-+ .-+..||||
T Consensus 75 ~ld~~~~~~~vS~--~v~~~--~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses 150 (491)
T KOG1383 75 MLDGNPRLGLASG--VVYWG--EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSES 150 (491)
T ss_pred CCCCCCCCCEEEE--EEECC--CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
T ss_conf 0286710170247--78348--8313468999875047567411433589999999999998469964567554465168
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCC-HHHHHHHHHCCCCCC
Q ss_conf 3567776654320013478600234354656543212345532113479998643332--2210-026887541012332
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFD--QAKF-CDLQSLKNQISNDTA 178 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~--~~~~-~d~~~l~~~~~~~iA 178 (392)
..+|.|--|.+........+..|++-... | . .-.++.+-|+-....+. .-.| -|+..+...+.+++.
T Consensus 151 ~l~~~k~~~~~r~~~k~i~~p~iv~~~~v-~--------~-a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti 220 (491)
T KOG1383 151 GLAAKKSYRNRRKAQKGIDKPNIVTPQNV-H--------A-AFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTI 220 (491)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHHHH-H--------H-HHHHHHHHEEEEEEEEECCCCCEEECHHHHHHHHCCCEE
T ss_conf 88898999999974059887100215889-9--------9-999987667999976503632257629999987534637
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHCCCCC-CCCEEEECCCCCCCCCC-CCCCCCCCCCC----CCCEEECCCCCCCCCC
Q ss_conf 222333222211246210123221102234-57213101100344445-55310111245----4530210344444434
Q gi|254780432|r 179 AILIEPIQGEGGVRKVPEEFLQQLRKICDD-IDALLIFDEVQTGYGRT-GKLFAYEWANV----KPDIMTIAKGMGGGFP 252 (392)
Q Consensus 179 avi~Epv~g~~G~~~~~~~~l~~l~~lc~~-~g~llI~DEV~tG~GRt-G~~f~~e~~gi----~PDi~~~gK~l~gG~P 252 (392)
+++++--.---| .-|..++|-++.-+ |++.+-+|-..-||=-- | +...+.||. +|-|-+-+---|=-++
T Consensus 221 ~lV~~~~~~p~G----~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~-~~~~~~fdFr~p~V~Sisa~~HKYGl~~~ 295 (491)
T KOG1383 221 MLVGSLPNFPTG----EIEDVEKLADLLLEIWDIPIHVDACLGGFINPAG-YLNEEEFDFRVPGVTSISADGHKYGLAPA 295 (491)
T ss_pred EEEEECCCCCCC----CCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC-CCCCCCCCCCCCCEEEEEECCCEEEEECC
T ss_conf 999975888767----3015999999999872775042016766210132-45754566688881148723530001307
Q ss_pred -CCCCCCCCC--CCCCC------CCCC-CCCCCCCCCCC--HHHHHHHHHHHHCCCCCC---HHHHHCCHHHHHHHHHHH
Q ss_conf -432100011--12222------2332-23453211110--012334554320122210---112100002688999988
Q gi|254780432|r 253 -IGACLATNE--VAACM------NQGS-HGSTYGGNVLA--MVLGEKVLNIIQSDGFLE---NVINIAKILFEGLTAIKN 317 (392)
Q Consensus 253 -~sav~~~~~--i~~~~------~~~~-~~~T~~gnpl~--~aaa~a~L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~ 317 (392)
+|+|+-+.+ ..+.+ ..+. -+.|.+|+--+ .+++-++|=.+=++++.+ ++.+....|+++++++..
T Consensus 296 G~~~vl~r~k~~l~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~ 375 (491)
T KOG1383 296 GSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKG 375 (491)
T ss_pred CCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 85799985666665438984254676556752125785128999999999861788999999999999999986543556
Q ss_pred HCCCEEEEECCCEEEEEEEE-C---CCHHHHHHHHHHCCEEEEE-CCCCEEEECCCCC-CCHHHHHHHHHHHHHHHHHHC
Q ss_conf 67970755046400999872-4---9989999999968989962-6898899558986-889999999999999999852
Q gi|254780432|r 318 RFPNMFLEVRGQGLLIGLKT-V---FSPALLAAKFRDECLLTAP-SSDNVVRILPPLT-ITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 318 ~~~~~v~~vRG~Gl~~~ie~-~---~~~~~~~~~l~~~Gll~~~-~~~~~irl~Ppl~-it~~eid~~i~~l~~al~~L~ 391 (392)
+. +-|.- ..++-. . .+--.+...++..|=.+.. ..+..+.++--.. +.++-.|+++.-|++++.+|.
T Consensus 376 -----i~-i~gkp-~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~ 448 (491)
T KOG1383 376 -----IK-IVGKP-LVSFILFGSNDVNIFELSDLLRKKGWILNALQFPAAIHICVTRVHAREDVADRFVADIRKVVEELK 448 (491)
T ss_pred -----CE-ECCCC-CEEEEECCCCCCCCEEHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHH
T ss_conf -----13-32787-379997168765311145789863867665678872168988641358889999999999999998
Q ss_pred C
Q ss_conf 9
Q gi|254780432|r 392 H 392 (392)
Q Consensus 392 ~ 392 (392)
+
T Consensus 449 ~ 449 (491)
T KOG1383 449 S 449 (491)
T ss_pred H
T ss_conf 4
No 326
>KOG0633 consensus
Probab=96.43 E-value=0.092 Score=31.97 Aligned_cols=275 Identities=16% Similarity=0.226 Sum_probs=135.7
Q ss_pred HHHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999865201013--331235655540356777665432001347860023435465654321234553211347999864
Q gi|254780432|r 78 IFANHLIHSTFA--DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKI 155 (392)
Q Consensus 78 ~la~~L~~~~~~--~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~ 155 (392)
++.-.+.+..|+ |.....++--|-+|+-+|.. .-+||.||+..-..|.=-+. ...+.+-...+- |+.
T Consensus 73 ~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~-------c~PGkeKIl~cPPtysMY~v-~A~iNd~eVvkv---pl~ 141 (375)
T KOG0633 73 RLSDALAQDKPLTSDNICVGVGSDELIDLIIRCV-------CDPGKEKILDCPPTYSMYVV-DAAINDAEVVKV---PLN 141 (375)
T ss_pred HHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHE-------ECCCCCCEEECCCCCEEEEE-EEECCCCEEEEE---CCC
T ss_conf 1122116689987244677217288898878100-------05884303656985405899-740377347980---378
Q ss_pred CCCCCCCCHHHHHHHHHCC--CCCCCCC-CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 3332221002688754101--2332222-333222211246210123221102234572131011003444455531011
Q gi|254780432|r 156 EGFDQAKFCDLQSLKNQIS--NDTAAIL-IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYE 232 (392)
Q Consensus 156 ~~~~~~~~~d~~~l~~~~~--~~iAavi-~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e 232 (392)
++|. -+.+++...+. ..+-+++ ..|-.-. |.. ...+-+.++-+.-+ +.+.++||-.--| +|.....-
T Consensus 142 pdF~----lnvdai~evl~~ds~iK~~F~tSPgNPt-g~~-ik~~di~KiLe~p~--nglVVvDEAYidF--sg~~S~~~ 211 (375)
T KOG0633 142 PDFS----LNVDAIAEVLELDSKIKCIFLTSPGNPT-GSI-IKEDDILKILEMPD--NGLVVVDEAYIDF--SGVESRMK 211 (375)
T ss_pred CCCC----CCHHHHHHHHHCCCCCEEEEECCCCCCC-CCC-CCHHHHHHHHHCCC--CCEEEEEEEEEEE--CCCCCCCH
T ss_conf 8755----5699999998326643289981798987-330-33889999982988--8379975002760--25400245
Q ss_pred CCCCCCCEE---ECCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC--CCHHHHH--
Q ss_conf 124545302---1034444-4434432100011122222332234532111100123345543201222--1011210--
Q gi|254780432|r 233 WANVKPDIM---TIAKGMG-GGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGF--LENVINI-- 304 (392)
Q Consensus 233 ~~gi~PDi~---~~gK~l~-gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l--~~~~~~~-- 304 (392)
+-.--|.++ |++|+.| .|+-+|....+..|.+.+...-. .|.-+-.+..+|+++|. ..++ .+.++..
T Consensus 212 lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~Ka--PYNiS~~~s~~AL~Als---~~n~kkme~~rdaiv 286 (375)
T KOG0633 212 LVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAKA--PYNISVAGSVAALAALS---DSNGKKMEDVRDAIV 286 (375)
T ss_pred HHHHCCCEEEHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC--CCCCCCHHHHHHHHHCC---CCCCHHHHHHHHHHH
T ss_conf 7674886522545555417532675033352789999986228--85216245799998618---011227899999999
Q ss_pred --CCHHHHHHHHHHHHCCCEEEE-ECCCE-EEEEEEECCCH-----HHHHHHHHHCCEEEEECCCC-----EEEECCCCC
Q ss_conf --000268899998867970755-04640-09998724998-----99999999689899626898-----899558986
Q gi|254780432|r 305 --AKILFEGLTAIKNRFPNMFLE-VRGQG-LLIGLKTVFSP-----ALLAAKFRDECLLTAPSSDN-----VVRILPPLT 370 (392)
Q Consensus 305 --g~~l~~~L~~l~~~~~~~v~~-vRG~G-l~~~ie~~~~~-----~~~~~~l~~~Gll~~~~~~~-----~irl~Ppl~ 370 (392)
-.++.+.|.++ | ...+ +-|.- -++-++....+ ....+.+-+.|+.++..+.+ .+|+..
T Consensus 287 ~er~RL~keLt~v----~-~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitv--- 358 (375)
T KOG0633 287 RERERLFKELTEV----P-FLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITV--- 358 (375)
T ss_pred HHHHHHHHHHHCC----C-CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEC---
T ss_conf 9999998776327----6-5457778666657999970787378899999988756669997178504650089971---
Q ss_pred CCHHHHHHHHHHHHHH
Q ss_conf 8899999999999999
Q gi|254780432|r 371 ITAEEIHEGLERIERT 386 (392)
Q Consensus 371 it~~eid~~i~~l~~a 386 (392)
=|+|+=+..++.|++.
T Consensus 359 Gt~EentvL~k~~K~~ 374 (375)
T KOG0633 359 GTPEENTVLMKCLKQF 374 (375)
T ss_pred CCCCCCHHHHHHHHHH
T ss_conf 7864220899999865
No 327
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=96.22 E-value=0.026 Score=35.56 Aligned_cols=246 Identities=17% Similarity=0.146 Sum_probs=134.1
Q ss_pred EEEECHHHHHHHCCCCC--CHHHHHHHHHHHHHCCCCC----CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf 64641022674357878--9999999999997314506----87578189999986520101333123565554035677
Q gi|254780432|r 33 PFLDFASGIAVNSLGHS--HPELVAILKSQSEKLWHVS----NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAI 106 (392)
Q Consensus 33 ~yiD~~~g~~~~~lGh~--~p~i~~a~~~q~~~~~~~~----~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Ai 106 (392)
+.|..+...-.+++|-+ .|+.++|+.+.++...... .....+....+++.++..++.+.+..+|.-+-|+..++
T Consensus 21 ~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~ 100 (395)
T COG1921 21 RVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTL 100 (395)
T ss_pred HHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHH
T ss_conf 66524322100127876679899999999850543035640123135777999999836644033256788289999987
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC--
Q ss_conf 76654320013478600234354---6565432123455321134799986433322210026887541012332222--
Q gi|254780432|r 107 KTARRYHYMAGKTNKFRIVTFEG---AFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL-- 181 (392)
Q Consensus 107 klar~~~~~~g~t~r~~ii~~~~---~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi-- 181 (392)
-- .+ .++..|++.=. +||=+--..+ +--+..+..+..........++..+.++.++.+
T Consensus 101 ~a-------l~-~~~EvVis~g~lV~gg~~~v~d~~---------~~aG~~l~EvG~tn~t~~~d~~~AIne~ta~llkV 163 (395)
T COG1921 101 NA-------LA-EGKEVVVSRGELVEGGAFRVPDII---------RLAGAKLVEVGTTNRTHLKDYELAINENTALLLKV 163 (395)
T ss_pred HH-------HC-CCCEEEEECCCCCCCCCCCHHHHH---------HHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEE
T ss_conf 63-------20-577179971311568899866799---------97197799815657677888998854587058999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC-CCCCCCCEEECC--CCCCCCCCCCCCCC
Q ss_conf 333222211246210123221102234572131011003444455531011-124545302103--44444434432100
Q gi|254780432|r 182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYE-WANVKPDIMTIA--KGMGGGFPIGACLA 258 (392)
Q Consensus 182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e-~~gi~PDi~~~g--K~l~gG~P~sav~~ 258 (392)
..+=.+--+.. | ++.+.+++++||+++|.|- .+|. |.-+-...+ +...-+|++++| |-|+| -.-|-+++
T Consensus 164 ~s~~~~f~~~l--~---~~~l~~ia~~~~lpvivD~-aSg~-~v~~e~~l~~~la~GaDLV~~SgdKllgG-PqaGii~G 235 (395)
T COG1921 164 HSSNYGFTGML--S---EEELVEIAHEKGLPVIVDL-ASGA-LVDKEPDLREALALGADLVSFSGDKLLGG-PQAGIIVG 235 (395)
T ss_pred EECCCCCCCCC--C---HHHHHHHHHHCCCCEEEEC-CCCC-CCCCCCCHHHHHHCCCCEEEEECCHHCCC-CCCCEEEC
T ss_conf 50366614645--5---9999999987699779966-7763-00355445688860797899754011279-85433742
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCHHHH
Q ss_conf 01112222233223453211110012334554320122-2101121
Q gi|254780432|r 259 TNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDG-FLENVIN 303 (392)
Q Consensus 259 ~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~-l~~~~~~ 303 (392)
++++.+.++.....--..-.+...++-.++|+.++..+ ..++...
T Consensus 236 kKelI~~lq~~~l~Ralrv~K~tla~l~~aLe~y~~~~~~~~~~~~ 281 (395)
T COG1921 236 KKELIEKLQSHPLKRALRVDKETLAALEAALELYLQPEILGERLRT 281 (395)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 4999999976213343315827689999999987080134435578
No 328
>PRK13578 ornithine decarboxylase; Provisional
Probab=96.10 E-value=0.14 Score=30.82 Aligned_cols=45 Identities=13% Similarity=0.211 Sum_probs=35.4
Q ss_pred HHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 899999999689899626898899558986889999999999999
Q gi|254780432|r 341 PALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 341 ~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
...+.+.|+++||.+-.+..+.|-|.-++-.|+++++.+++.|.+
T Consensus 517 A~il~~yLre~gIvvEktdl~~ILfL~T~G~t~~k~~~Lv~aL~~ 561 (720)
T PRK13578 517 ATILANYLRENGIVPEKCDLNSILFLLTPAEDMAKLQQLVAMLAR 561 (720)
T ss_pred HHHHHHHHHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 899999998769079854775079997267888999999999999
No 329
>TIGR02617 tnaA_trp_ase tryptophanase; InterPro: IPR013440 Proteins in this entry belong to the beta-eliminating lyase family and are thought to act as tryptophanases (4.1.99.1 from EC) (also known as L-tryptophan indole-lyases). The genes encoding these proteins are, as a rule, found with a tryptophanase leader peptide TnaC (IPR013439 from INTERPRO) encoded upstream. ; GO: 0009034 tryptophanase activity, 0006568 tryptophan metabolic process.
Probab=95.89 E-value=0.017 Score=36.69 Aligned_cols=346 Identities=17% Similarity=0.243 Sum_probs=191.3
Q ss_pred EEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 985010379967997646410226743578789999999999997314506875-7818999998652010133312356
Q gi|254780432|r 18 FEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLY-QSTQQEIFANHLIHSTFADRVFFTN 96 (392)
Q Consensus 18 i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~-~~~~~~~la~~L~~~~~~~~v~f~~ 96 (392)
++.|-..+|-|.|- -|||+..-.|+-.+ .+.+...+- ..--.| .+-..-.|++++-+..|+.....+-
T Consensus 28 ~~aG~NPFLL~S~~-VfIDLLTDSGTGA~-------~~~~~Aa~~---~GDEAY~GSR~Yy~La~~V~~~~GY~YTIPTH 96 (468)
T TIGR02617 28 LEAGMNPFLLDSED-VFIDLLTDSGTGAV-------TQRMQAAMM---RGDEAYSGSRSYYALADKVKEIFGYQYTIPTH 96 (468)
T ss_pred HHCCCCCCCCCCCC-EEEEEECCCCCCCC-------CHHHHHHHH---CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 95789875377001-13431126885310-------546677642---36410213235899999976642731136875
Q ss_pred --CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf --5554035677766543200134786002343546565432123455321----1347999864333222100268875
Q gi|254780432|r 97 --SGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL----QYLEGFGPKIEGFDQAKFCDLQSLK 170 (392)
Q Consensus 97 --SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~----~~~~~~~p~~~~~~~~~~~d~~~l~ 170 (392)
-|+|-+-.=+=++|+- ..+| ..|.|+|.+++=|--.|.+-..+.|-. ...+.|+-. ...+.----|+|.||
T Consensus 97 QGRGAEQI~~P~LI~~~~-~~~G-~~~~kmV~~SNyfFDTT~~H~~~Ng~~a~NV~~~~AFDT~-~~~DfKG~FDl~~LE 173 (468)
T TIGR02617 97 QGRGAEQIYIPVLIKKRE-AEKG-LDRSKMVALSNYFFDTTQGHVQINGCKAKNVYTSEAFDTG-VKYDFKGNFDLEELE 173 (468)
T ss_pred CCCCHHHHHHHHHHHHHH-HHCC-CCCCCEEEEECCCCHHHHHHHHHCCCEEEEEEEECCCCCC-EECCCCCCCCHHHHH
T ss_conf 788604456657888776-6258-9855278873232011134443135237887752022343-201335675778887
Q ss_pred HHCC----CCCCCCCCCCCCC-CCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC--CCCCCC------CCCC-
Q ss_conf 4101----2332222333222-211246210123221102234572131011003444455--531011------1245-
Q gi|254780432|r 171 NQIS----NDTAAILIEPIQG-EGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG--KLFAYE------WANV- 236 (392)
Q Consensus 171 ~~~~----~~iAavi~Epv~g-~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG--~~f~~e------~~gi- 236 (392)
+.+. ++|.+| +-+|-+ +.|-.|.+-.=|+++.+++++|+|++|.|-- |-- .||-.| .|-|
T Consensus 174 ~~I~E~G~~NV~~I-v~TiTcNSaGGQPvSlANlKAvY~IAk~yDIPVv~DSA-----RFaENAyFIkQRE~~Y~~~si~ 247 (468)
T TIGR02617 174 KTIAEAGPDNVPYI-VTTITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSA-----RFAENAYFIKQREKEYENWSIE 247 (468)
T ss_pred HHHHCCCCCCCEEE-EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCH-----HHHHHHHHHHHHHHHHCCCCHH
T ss_conf 88750285663277-77543168968426788889999998645998686230-----2233457777533000033188
Q ss_pred --------CCCEEECCCCCCCCCCCCCCC-CCCC-CCCCCCCC-------CCCCCCCCC----CCCHHHHHHHHHHHHCC
Q ss_conf --------453021034444443443210-0011-12222233-------223453211----11001233455432012
Q gi|254780432|r 237 --------KPDIMTIAKGMGGGFPIGACL-ATNE-VAACMNQG-------SHGSTYGGN----VLAMVLGEKVLNIIQSD 295 (392)
Q Consensus 237 --------~PDi~~~gK~l~gG~P~sav~-~~~~-i~~~~~~~-------~~~~T~~gn----pl~~aaa~a~L~~l~~~ 295 (392)
-.|+++||-.=-.=.++|+++ .++| ..|.+.+- +-+-||+|= .=.+|+++ -|-|.++
T Consensus 248 ~I~~E~Y~YaD~L~MSAKKD~~V~~GGL~C~~Ddsf~D~y~E~RT~CV~~EGF~TYGGL~G~~ME~LAvGL--~~GM~~~ 325 (468)
T TIGR02617 248 QITREMYKYADMLAMSAKKDALVNMGGLLCFKDDSFFDVYTEVRTLCVVQEGFPTYGGLEGGAMERLAVGL--YDGMNED 325 (468)
T ss_pred HHHHHHHHHCCHHHHHHCCCCCCCCCCEEEECCCCHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHH--HHHCCCC
T ss_conf 98888654202011010125400047625520352245533312223214675555777604578887514--5300343
Q ss_pred CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE-C-CCEEEEEEEE-----C---CCH-HHHHHHHHHCCEE-------EEE
Q ss_conf 2210112100002688999988679707550-4-6400999872-----4---998-9999999968989-------962
Q gi|254780432|r 296 GFLENVINIAKILFEGLTAIKNRFPNMFLEV-R-GQGLLIGLKT-----V---FSP-ALLAAKFRDECLL-------TAP 357 (392)
Q Consensus 296 ~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v-R-G~Gl~~~ie~-----~---~~~-~~~~~~l~~~Gll-------~~~ 357 (392)
=|.-|+.+.. +|.++|+++ +++.+- - |.-.+.--.. + .+. +.-++.....||- +.+
T Consensus 326 ~LAYRI~QV~-YL~~~L~~~-----Gv~~Q~P~GGHA~FVDA~~LLPHIPa~QFPA~AL~~ELY~~AGIRaVEIGSlLLG 399 (468)
T TIGR02617 326 YLAYRINQVA-YLVNGLEDI-----GVVIQQPAGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLG 399 (468)
T ss_pred HHHHHHHHHH-HHHHHHHHC-----CCEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECHHHHC
T ss_conf 2778899999-998557667-----8057649986376763110278888655548888555677617114531014216
Q ss_pred C----C------CCEEEECCC-CCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 6----8------988995589-86889999999999999999852
Q gi|254780432|r 358 S----S------DNVVRILPP-LTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 358 ~----~------~~~irl~Pp-l~it~~eid~~i~~l~~al~~L~ 391 (392)
. | -+.|||.-| -+.|.+++|.++++|.++=.+..
T Consensus 400 RDP~TGKQ~P~P~ELLRLTIPR~~YT~~HMDfiiEAF~~~K~~~~ 444 (468)
T TIGR02617 400 RDPKTGKQKPCPAELLRLTIPRATYTQTHMDFIIEAFKSVKENAP 444 (468)
T ss_pred CCCCCCCCCCCHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 788787888870677640266201101124789999999987543
No 330
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein; InterPro: IPR011340 This entry describes probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. The most closely related characterised proteins are active as cysteine desulphurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown..
Probab=95.88 E-value=0.17 Score=30.21 Aligned_cols=314 Identities=19% Similarity=0.188 Sum_probs=161.8
Q ss_pred EEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCC-CCCCCCCH-HH-HH---HHH----HHHHHCCCCCCCCCCCCCCCH
Q ss_conf 6464102267435787899999999999973145-06875781-89-99---998----652010133312356555403
Q gi|254780432|r 33 PFLDFASGIAVNSLGHSHPELVAILKSQSEKLWH-VSNLYQST-QQ-EI---FAN----HLIHSTFADRVFFTNSGAESV 102 (392)
Q Consensus 33 ~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~-~~~~~~~~-~~-~~---la~----~L~~~~~~~~v~f~~SGseA~ 102 (392)
-|+|--+| +.=+..+++||.+.+.+..- ....|..+ .. .+ -|+ .|+.-.+++.|.| |..++
T Consensus 23 ~~~DnpAG------~q~Pq~V~dAv~~~L~~~~A~~gg~~~~~G~~~~~~vd~AR~a~A~LlnA~~Pe~vv~---G~~~T 93 (410)
T TIGR01976 23 VFFDNPAG------TQIPQSVLDAVSAALTRSNANRGGAYESSGRKADQVVDDAREAVADLLNAESPEEVVF---GANAT 93 (410)
T ss_pred EEEECCCC------CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE---CCCHH
T ss_conf 89757888------8777347999999987413013767766306899999999999999726798885676---78668
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCC--CCCCCCCCCCH-HHHHHHHHCCCC
Q ss_conf 567776654320013478600234354656543212345532113479---998--64333222100-268875410123
Q gi|254780432|r 103 ECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEG---FGP--KIEGFDQAKFC-DLQSLKNQISND 176 (392)
Q Consensus 103 e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~---~~p--~~~~~~~~~~~-d~~~l~~~~~~~ 176 (392)
..+-+++|...+..+ +|---||+.-..+ ++-..|.+- .+- +-..++..... +.++|...+.++
T Consensus 94 ~L~~~ls~a~~~~~~-~GDEvivt~LDHe----------aNispW~~~a~~~Ga~Vkw~~~d~~~~~L~~~~L~~Lls~r 162 (410)
T TIGR01976 94 SLAYLLSRALSRRWG-PGDEVIVTRLDHE----------ANISPWLQAAEDAGAKVKWARVDEADGELHPDDLASLLSPR 162 (410)
T ss_pred HHHHHHHHHHHHHCC-CCCEEEEECCCCC----------CCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCC
T ss_conf 999999999851268-9855897167660----------01368999998389789996336231544869982366882
Q ss_pred ---CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC---CCEEECCCCCCCC
Q ss_conf ---3222233322221124621012322110223457213101100344445553101112454---5302103444444
Q gi|254780432|r 177 ---TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVK---PDIMTIAKGMGGG 250 (392)
Q Consensus 177 ---iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~---PDi~~~gK~l~gG 250 (392)
||+=..-=.. |.++- ++.|.++.++.|.++.+|=|+-+ -|.--||+ -|++++|-==-.|
T Consensus 163 TRLVAvt~ASn~~---Gs~~d----l~A~~~~vh~aGA~v~VDaVhya--------PH~L~Dvqa~gaD~l~cSaYK~fG 227 (410)
T TIGR01976 163 TRLVAVTAASNLL---GSIVD----LAALTELVHAAGALVYVDAVHYA--------PHGLIDVQALGADFLVCSAYKFFG 227 (410)
T ss_pred HHHHHHHHHHCCC---CCHHH----HHHHHHHHHHCCCEEEECHHHHC--------CCCCCCHHHHCCCEEEECCEECCC
T ss_conf 2555623440232---55115----88999999875987988111004--------566641342278879985631168
Q ss_pred CCCCCCCCCCCCCCCCCCCC-------------CCCCCCCCCCCHHHHHHHHHHHH----C-------CCCC---CHHHH
Q ss_conf 34432100011122222332-------------23453211110012334554320----1-------2221---01121
Q gi|254780432|r 251 FPIGACLATNEVAACMNQGS-------------HGSTYGGNVLAMVLGEKVLNIIQ----S-------DGFL---ENVIN 303 (392)
Q Consensus 251 ~P~sav~~~~~i~~~~~~~~-------------~~~T~~gnpl~~aaa~a~L~~l~----~-------~~l~---~~~~~ 303 (392)
=++|.+.+|.++.+.+.+.. +|.-.-.+--+..|+.--|+.+. . ++|. +.++.
T Consensus 228 PH~G~l~~R~~~~~~l~~~k~~~~~d~~P~r~E~GT~~yEllAG~~AavdYLa~lg~nlA~~~~gsrR~~lv~sf~~~~a 307 (410)
T TIGR01976 228 PHLGILWGRPELLKSLPPYKLEFSEDTGPERFELGTLQYELLAGVVAAVDYLAGLGRNLAASANGSRRERLVASFEAIEA 307 (410)
T ss_pred CCEEEEEECHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 85017871146640468763367788888514514556026789999999999823210689886558999999999999
Q ss_pred HCCHHHHHHHHHHHHCCCEEEEECCCE----E-----EEEEEEC-CCHHHHHHHHHHCCEEEEEC---------------
Q ss_conf 000026889999886797075504640----0-----9998724-99899999999689899626---------------
Q gi|254780432|r 304 IAKILFEGLTAIKNRFPNMFLEVRGQG----L-----LIGLKTV-FSPALLAAKFRDECLLTAPS--------------- 358 (392)
Q Consensus 304 ~g~~l~~~L~~l~~~~~~~v~~vRG~G----l-----~~~ie~~-~~~~~~~~~l~~~Gll~~~~--------------- 358 (392)
-++.+.+.|..-....|. + .|-|.- + -++|.+. ..+..+.++|-+++|.+.-.
T Consensus 308 yE~~l~~~Ll~~L~~~P~-~-t~yG~~d~~R~~~RvPTv~F~v~~~~P~~~~~~La~~~v~~~~GHfYA~~~~~~LGl~~ 385 (410)
T TIGR01976 308 YENRLAERLLAGLSDLPG-V-TVYGVQDEKRLAERVPTVAFTVAGLSPQRVVRRLADQGVDVWAGHFYAVRLLRRLGLEA 385 (410)
T ss_pred HHHHHHHHHHHHHHHCCC-E-EEECHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCC
T ss_conf 999999999999874895-6-99735578646425975889727878799999985368633126411689998658989
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 8988995589868899999999999
Q gi|254780432|r 359 SDNVVRILPPLTITAEEIHEGLERI 383 (392)
Q Consensus 359 ~~~~irl~Ppl~it~~eid~~i~~l 383 (392)
.+.+||..=.=.-|.||||++++.|
T Consensus 386 ~~GvvR~gLaHY~t~eevd~l~~aL 410 (410)
T TIGR01976 386 DGGVVRVGLAHYNTAEEVDRLLEAL 410 (410)
T ss_pred CCCEEEEEECCCCCHHHHHHHHHCC
T ss_conf 8873898525779889999998509
No 331
>KOG2467 consensus
Probab=94.87 E-value=0.13 Score=31.08 Aligned_cols=184 Identities=20% Similarity=0.272 Sum_probs=81.5
Q ss_pred CCCHHH-HHHHHCCCCCCCCEEEECCC-CCCCCCCCC-CCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCC-------
Q ss_conf 621012-32211022345721310110-034444555-3101112454530210344444434432100-011-------
Q gi|254780432|r 193 KVPEEF-LQQLRKICDDIDALLIFDEV-QTGYGRTGK-LFAYEWANVKPDIMTIAKGMGGGFPIGACLA-TNE------- 261 (392)
Q Consensus 193 ~~~~~~-l~~l~~lc~~~g~llI~DEV-~tG~GRtG~-~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~-~~~------- 261 (392)
.++..| ..++|++|++.|+.|++|=- .+|+=-.|. .--||+-||+ ..|.-|+|-| |=++++. |+-
T Consensus 199 aY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiV--TTTTHKsLRG--PRg~mIFyRkGvk~~~~k 274 (477)
T KOG2467 199 AYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIV--TTTTHKSLRG--PRGAMIFYRKGVKSIKPK 274 (477)
T ss_pred CCHHHCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCEE--ECCCCCCCCC--CCCEEEEEECCCCCCCCC
T ss_conf 213231389999998752806641356677777526679964201246--4134345568--763168983267767878
Q ss_pred -----CCCCC-------CCCCCCCCCCCCCCCHHHHHHHHHHHHCC---CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf -----12222-------23322345321111001233455432012---2210112100002688999988679707550
Q gi|254780432|r 262 -----VAACM-------NQGSHGSTYGGNVLAMVLGEKVLNIIQSD---GFLENVINIAKILFEGLTAIKNRFPNMFLEV 326 (392)
Q Consensus 262 -----i~~~~-------~~~~~~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v 326 (392)
.++.- -|+..|.-++-.--+.|+|+ +.-.++ ..++++.+..+.|.+.|.+.. + .+++.
T Consensus 275 ~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvAL---kQa~tpefk~Yq~qV~~Nakala~~l~~~G--y-~lvtg- 347 (477)
T KOG2467 275 QGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVAL---KQAMTPEFKEYQKQVLKNAKALASALISRG--Y-KLVTG- 347 (477)
T ss_pred CCCCCEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHHHHCC--C-EEECC-
T ss_conf 8976401266530122266556898733589999999---860787799999999999999999999729--6-67407-
Q ss_pred CCCE-EEEEEEECCC--HHHHHHHHHHC-CEE----EEE-----CCCCEEEEC-CCCC---CCHHHHHHHHHHHHHHHH
Q ss_conf 4640-0999872499--89999999968-989----962-----689889955-8986---889999999999999999
Q gi|254780432|r 327 RGQG-LLIGLKTVFS--PALLAAKFRDE-CLL----TAP-----SSDNVVRIL-PPLT---ITAEEIHEGLERIERTAI 388 (392)
Q Consensus 327 RG~G-l~~~ie~~~~--~~~~~~~l~~~-Gll----~~~-----~~~~~irl~-Ppl~---it~~eid~~i~~l~~al~ 388 (392)
|.. -|+-+++... +...+++..+. +|- +.+ ..+..||+. |++| +.|+|..+..+.|++++.
T Consensus 348 -GTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467 348 -GTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred -CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf -866527999656467750899999987541333776778744558884331661221367668889999999999999
No 332
>PRK12566 glycine dehydrogenase; Provisional
Probab=93.29 E-value=0.74 Score=26.03 Aligned_cols=298 Identities=18% Similarity=0.194 Sum_probs=151.3
Q ss_pred HHHCCCCCCHHHH-HHHHHHHHHC-CCCCC-CCCCHH-HH------HHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHH
Q ss_conf 7435787899999-9999999731-45068-757818-99------9998652010133--3123565554035677766
Q gi|254780432|r 42 AVNSLGHSHPELV-AILKSQSEKL-WHVSN-LYQSTQ-QE------IFANHLIHSTFAD--RVFFTNSGAESVECAIKTA 109 (392)
Q Consensus 42 ~~~~lGh~~p~i~-~a~~~q~~~~-~~~~~-~~~~~~-~~------~la~~L~~~~~~~--~v~f~~SGseA~e~Aikla 109 (392)
|.-..+|--|.++ +.+ +++. |++.+ -|+.+. +- +|-..+++.+++| .+-...-||-|.|+ +.||
T Consensus 85 G~Gyy~t~tP~vI~Rnv---lenp~wyTaYTPYQpEISQGrLeaL~nfQTmi~dLTGm~vaNASllDeaTAaAEA-m~ma 160 (954)
T PRK12566 85 GMGYHGTVTPTVILRNV---LENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEA-MALA 160 (954)
T ss_pred CCCCCCCCCCHHHHHHH---HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-HHHH
T ss_conf 17767884756777753---0488750477998646766999999999999999878760057600089999999-9998
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 54320013478600234354656543212345532113479998643332221002688754101233222233322221
Q gi|254780432|r 110 RRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEG 189 (392)
Q Consensus 110 r~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~ 189 (392)
++.. +.++.+++. ...-|=.|..-+. .+.++++ +..+ ..+++. ...++++++++.-= +..
T Consensus 161 ~r~~----k~k~~~~~V-~~~~~Pqt~~Vl~-----tra~~~g-----ie~v-v~~~~~---~~~~~~~gvlvqyP-~~~ 220 (954)
T PRK12566 161 KRVA----KSKSNRFFV-DEHCHPQTLSVLK-----TRAEGFG-----FELV-VDEVDN---LAQHAVFGALLQYP-DTH 220 (954)
T ss_pred HHHH----CCCCCEEEE-CCCCCHHHHHHHH-----HCCCCCC-----CEEE-ECCHHH---CCCCCEEEEEEECC-CCC
T ss_conf 9875----368887998-8987888999999-----6033579-----5799-638676---67667589999789-988
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCEEEECC--CCCCCCCC-CCCCCCCCCCCCCCEEE-----CCCCCCCCCCCCCCCCCCC
Q ss_conf 1246210123221102234572131011--00344445-55310111245453021-----0344444434432100011
Q gi|254780432|r 190 GVRKVPEEFLQQLRKICDDIDALLIFDE--VQTGYGRT-GKLFAYEWANVKPDIMT-----IAKGMGGGFPIGACLATNE 261 (392)
Q Consensus 190 G~~~~~~~~l~~l~~lc~~~g~llI~DE--V~tG~GRt-G~~f~~e~~gi~PDi~~-----~gK~l~gG~P~sav~~~~~ 261 (392)
|.+.- +..+.+.+++.|+++|+.- +.-++=+. |. +| .||++ ||=.++=|=|-.++++.++
T Consensus 221 G~i~d----~~~~~~~ah~~gal~iv~~D~laL~lLk~PGe------~G--ADIavG~~QrfGvPmgfGGPhagffAtr~ 288 (954)
T PRK12566 221 GEVRD----LRPLIDQLHGQQALACVAADLLSLLLLTPPGE------LG--ADVVLGSTQRFGVPMGYGGPHAAFFACRD 288 (954)
T ss_pred CCCCC----CHHHHHHHHHCCCEEEEEHHHHHHHCCCCHHH------CC--CCEEEEECCCCCCCCCCCCCCEEEEEEHH
T ss_conf 76147----56789877345928998656768770498344------18--75798406636765567887502335724
Q ss_pred CCCCCCCCCC-CCC--CCCCC----------------------------CCHHHHHHHHHHHHCC----CCCCHHHHHCC
Q ss_conf 1222223322-345--32111----------------------------1001233455432012----22101121000
Q gi|254780432|r 262 VAACMNQGSH-GST--YGGNV----------------------------LAMVLGEKVLNIIQSD----GFLENVINIAK 306 (392)
Q Consensus 262 i~~~~~~~~~-~~T--~~gnp----------------------------l~~aaa~a~L~~l~~~----~l~~~~~~~g~ 306 (392)
-+...-|+.. |-| -.|+| ++..|+..+ ++.-. ++.+|+..+..
T Consensus 289 ~~kR~mPGRiVGvS~D~~G~~a~rlaLQTREQHIRReKATSNICTaQaLLA~mAamYA--vYHGPeGLk~IA~rih~~a~ 366 (954)
T PRK12566 289 DYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYA--VYHGPEGLKRIAQRVHRLTA 366 (954)
T ss_pred HHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHH
T ss_conf 4653599743403777997951322133689999862010000277899999999999--87199999999999999999
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCEEEEEE--EECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 02688999988679707550464009998--7249989999999968989962689889955898688999999999999
Q gi|254780432|r 307 ILFEGLTAIKNRFPNMFLEVRGQGLLIGL--KTVFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIE 384 (392)
Q Consensus 307 ~l~~~L~~l~~~~~~~v~~vRG~Gl~~~i--e~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~ 384 (392)
.|.++|+++ ++ ++...-+|=.+ +.......+.++..+.++.++...++.|.++--=+.|+++++.++.+|.
T Consensus 367 ~la~~L~~~-----G~--~v~~~~fFDTl~v~~~~~~~~i~~~A~~~~iNlR~~d~~~vgISlDEttt~~dl~~Ll~vF~ 439 (954)
T PRK12566 367 ILAAGLEAK-----GI--KRLNRHFFDTLTLEVGGAQAAIIESAEAAQINLRILGRGRLGLSLDETCDEATVARLFDIFL 439 (954)
T ss_pred HHHHHHHHC-----CC--EECCCCEEEEEEEECCCCHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 999999877-----97--12578615679996486499999999977974787169979998056688999999999983
No 333
>TIGR00461 gcvP glycine dehydrogenase; InterPro: IPR003437 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T . The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0006544 glycine metabolic process, 0005961 glycine dehydrogenase complex (decarboxylating).
Probab=93.05 E-value=0.81 Score=25.79 Aligned_cols=286 Identities=17% Similarity=0.277 Sum_probs=170.8
Q ss_pred HHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999986520101333123-5655540356777665432001347860023435465654321234553211347999864
Q gi|254780432|r 77 EIFANHLIHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKI 155 (392)
Q Consensus 77 ~~la~~L~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~ 155 (392)
..|++.|++.+|+|-+-+ -||||-.==+-|+..|+|+..+|...|. |.-.=-|=||.--++-.+.|-.. -+
T Consensus 554 a~Le~wL~~iTGfDaislQPNsGaQGEYaGL~vIR~YheSrgE~hRn-iCLIP~SAHGTNPASA~MaGm~V-------Vp 625 (965)
T TIGR00461 554 AQLEKWLVEITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGEEHRN-ICLIPVSAHGTNPASAAMAGMQV-------VP 625 (965)
T ss_pred HHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-EEECCCCCCCCCHHHHHHCCCEE-------EE
T ss_conf 99988752105766244178888446678899999987605889874-45307776788728996169868-------98
Q ss_pred CCCC---CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECC----CCCCCCCCCCC
Q ss_conf 3332---2210026887541012332222333222211246210123221102234572131011----00344445553
Q gi|254780432|r 156 EGFD---QAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDE----VQTGYGRTGKL 228 (392)
Q Consensus 156 ~~~~---~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE----V~tG~GRtG~~ 228 (392)
-.++ .++-.|+.+--+..+++.|||.+ +..+.-|+..+. .+.+.++..+.|.=+.+|= -|.|+-|=|.+
T Consensus 626 V~Cd~~GniDl~DL~~KAEq~gd~Laa~Mv-TYPSThGvfE~t---I~~~~diVH~FGGqVYlDGANMNAQVGltsPgd~ 701 (965)
T TIGR00461 626 VKCDKDGNIDLVDLKAKAEQYGDELAAVMV-TYPSTHGVFEET---IREVCDIVHRFGGQVYLDGANMNAQVGLTSPGDL 701 (965)
T ss_pred EEECCCCCEEHHHHHHHHHHCCCCEEEEEE-ECCCCCCCCHHH---HCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 765699950077778888750665256775-058776643222---1001311442688475245664223366786110
Q ss_pred CCCCCCCCCCCEE--ECCCCC----CCCCC-CCCCCCCCCCCCCCCCCC------------CCCCCCCCCCCHH----HH
Q ss_conf 1011124545302--103444----44434-432100011122222332------------2345321111001----23
Q gi|254780432|r 229 FAYEWANVKPDIM--TIAKGM----GGGFP-IGACLATNEVAACMNQGS------------HGSTYGGNVLAMV----LG 285 (392)
Q Consensus 229 f~~e~~gi~PDi~--~~gK~l----~gG~P-~sav~~~~~i~~~~~~~~------------~~~T~~gnpl~~a----aa 285 (392)
- .|+. -+=|.. |||=| ++=+.++..+.-.+.... --..-+.-|.+.| ..
T Consensus 702 G--------ADVcHLNLHKTFcIPHGGGGPgmgPIgVKsHL~pflP~~~~~s~~~~~g~~~sig~vSaAPyGsAsiLpIS 773 (965)
T TIGR00461 702 G--------ADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKTDVVSVVELEGESKSIGAVSAAPYGSASILPIS 773 (965)
T ss_pred C--------CCHHHHHCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCHHHHHHH
T ss_conf 5--------63434305442012686787877522246402245888760001565312324354523654541466889
Q ss_pred HHHHHHHHCCCCCC--HHHHH-CCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC-----------HHHHHHHHHHC
Q ss_conf 34554320122210--11210-000268899998867970755046400999872499-----------89999999968
Q gi|254780432|r 286 EKVLNIIQSDGFLE--NVINI-AKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS-----------PALLAAKFRDE 351 (392)
Q Consensus 286 ~a~L~~l~~~~l~~--~~~~~-g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~-----------~~~~~~~l~~~ 351 (392)
-.-|+.|=.++|.+ .++-+ .+|+.+||+. .||=++.+--|.--..+=||..+ ...++++|.+-
T Consensus 774 w~YI~MMG~eGL~kas~vAiLnaNYma~RL~d---~ypiLf~nemg~~~~vAHEcIlDlRplK~~~gie~~DvAKRL~Dy 850 (965)
T TIGR00461 774 WMYIKMMGAEGLKKASEVAILNANYMAKRLKD---YYPILFVNEMGRDKRVAHECILDLRPLKKKAGIEALDVAKRLIDY 850 (965)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH---CCCEEEEECCCCCCCEEEEEEECHHHHHHHHCCCHHHHHHHHHCC
T ss_conf 99998522013503557775626689988761---076544311578883135676352554565176544567664115
Q ss_pred CEEE----EECCCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9899----6268988995589868899999999999999
Q gi|254780432|r 352 CLLT----APSSDNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 352 Gll~----~~~~~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
|-.. .|.-+ ++-+-|.=-=+.+|||+++|+.-.-
T Consensus 851 GFHAPT~sfPV~G-TlMvEPTESEsl~ELDRF~DAMiaI 888 (965)
T TIGR00461 851 GFHAPTLSFPVAG-TLMVEPTESESLEELDRFCDAMIAI 888 (965)
T ss_pred CCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 7765332336787-4200554656631245888899999
No 334
>PRK05367 glycine dehydrogenase; Provisional
Probab=92.24 E-value=1 Score=25.11 Aligned_cols=265 Identities=19% Similarity=0.178 Sum_probs=134.2
Q ss_pred HHHHHHCCCC--CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8652010133--31235655540356777665432001347860023435465654321234553211347999864333
Q gi|254780432|r 81 NHLIHSTFAD--RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGF 158 (392)
Q Consensus 81 ~~L~~~~~~~--~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~ 158 (392)
..+++.++++ .+....-||.|.|++. +|++.. +.++.+++. ...-|=.|..-+. .+.++++- .+
T Consensus 132 tmi~dLTGm~vaNASllDeaTAaaEAm~-ma~r~~----k~k~~~~~V-~~~~~Pqt~~Vl~-----Tra~~~gi---ei 197 (955)
T PRK05367 132 TMVCDLTGLPIANASLLDEATAAAEAMA-LAKRVS----KSKSNRFFV-DDDVHPQTLDVVR-----TRAEPLGI---EV 197 (955)
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHH-HHHHHH----CCCCCEEEE-CCCCCHHHHHHHH-----HHCCCCCC---EE
T ss_conf 9999986876004321018999999999-998862----268887998-8987863899999-----60535797---79
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEE--CCCCCCCCCC-CCCCCCCCCC
Q ss_conf 222100268875410123322223332222112462101232211022345721310--1100344445-5531011124
Q gi|254780432|r 159 DQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIF--DEVQTGYGRT-GKLFAYEWAN 235 (392)
Q Consensus 159 ~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~--DEV~tG~GRt-G~~f~~e~~g 235 (392)
. ..|.+. ....++++++++.---. -|.+.- ++.+.+.+++.|+++|+ |=..-++=+. |. ||
T Consensus 198 ~---v~d~~~--~~~~~d~~gvlvQyP~~-~G~i~D----~~~~~~~ah~~gal~iv~~D~laL~lLkpPGe------~G 261 (955)
T PRK05367 198 V---VGDAAE--ALDHDDVFGVLLQYPGT-SGEVRD----YRALIAAAHAAGALVAVAADLLALTLLTPPGE------MG 261 (955)
T ss_pred E---EECHHH--CCCCCCEEEEEEECCCC-CCCCCC----HHHHHHHHHHCCCEEEEECCHHHHHCCCCHHH------CC
T ss_conf 9---957565--67767779999978998-887178----79999999765978999746667752389666------38
Q ss_pred CCCCEEE-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC--CCCCC----------------------------
Q ss_conf 5453021-----03444444344321000111222223322-345--32111----------------------------
Q gi|254780432|r 236 VKPDIMT-----IAKGMGGGFPIGACLATNEVAACMNQGSH-GST--YGGNV---------------------------- 279 (392)
Q Consensus 236 i~PDi~~-----~gK~l~gG~P~sav~~~~~i~~~~~~~~~-~~T--~~gnp---------------------------- 279 (392)
.||++ ||=.|+-|=|-.++++.++-+...-|+.. |-| -.|+|
T Consensus 262 --ADIaVGs~QrfGvPmgfGGPhagffA~~~~~~R~mPGRiVG~S~D~~G~~ayrlaLQTREQHIRReKATSNICTaQaL 339 (955)
T PRK05367 262 --ADIAVGSAQRFGVPMGFGGPHAAYFATRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVL 339 (955)
T ss_pred --CCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf --767973166667776678865378886366415899753403665896975553001489998765201011477899
Q ss_pred CCHHHHHHHHHHHHCC----CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEE--EEECCCHHHHHHHHHHCCE
Q ss_conf 1001233455432012----221011210000268899998867970755046400999--8724998999999996898
Q gi|254780432|r 280 LAMVLGEKVLNIIQSD----GFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIG--LKTVFSPALLAAKFRDECL 353 (392)
Q Consensus 280 l~~aaa~a~L~~l~~~----~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~--ie~~~~~~~~~~~l~~~Gl 353 (392)
++..|+..+ ++.-. ++.+|+..+...|.+.|+.+ ++ ++...-+|=. ++...+...+.++..++|+
T Consensus 340 LA~mA~~YA--vYHGP~GLk~IA~rih~~a~~la~~l~~~-----G~--~v~~~~fFDTl~v~~~~~a~~i~~~A~~~gi 410 (955)
T PRK05367 340 LAVMASMYA--VYHGPEGLKAIARRVHRLTAILAAGLKAL-----GF--KLVHDSFFDTLTVEVGGDAAAILARALAAGI 410 (955)
T ss_pred HHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHHHHHC-----CC--CCCCCCCEEEEEEECCCCHHHHHHHHHHCCC
T ss_conf 999998896--30089999999999999999999999978-----98--4457871027999658559999999997697
Q ss_pred EEEECCCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 996268988995589868899999999999999
Q gi|254780432|r 354 LTAPSSDNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 354 l~~~~~~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
.++...++.|.++--=+.|++||+.++++|...
T Consensus 411 Nlr~~d~~~v~iSlDEttt~~dl~~l~~~f~~~ 443 (955)
T PRK05367 411 NLRRVDDDAVGISLDETTTREDVAALLSVFGDG 443 (955)
T ss_pred EEEEECCCEEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 289836996999935879999999999997132
No 335
>pfam04864 Alliinase_C Allinase. Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesized from sulfoxide cysteine derivatives by alliinase (EC:4.4.1.4), whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system.
Probab=91.80 E-value=1.2 Score=24.78 Aligned_cols=187 Identities=21% Similarity=0.261 Sum_probs=94.4
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC-CC----CCCEE--ECCCCCC-CCCC
Q ss_conf 233322221124621012322110223457213101100344445553101112-45----45302--1034444-4434
Q gi|254780432|r 181 LIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWA-NV----KPDIM--TIAKGMG-GGFP 252 (392)
Q Consensus 181 i~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~-gi----~PDi~--~~gK~l~-gG~P 252 (392)
.+|-|-+-+ =|++.+++ .+.+.-+...|-|=+. .|-|| .| .-||| ++||..| .|.-
T Consensus 139 ~IElVtSPN----NPdG~lr~--aV~~g~~~k~i~D~aY----------YWPhyTpIt~~aD~DIMLFTlSK~TGHAGsR 202 (363)
T pfam04864 139 FIELVTSPN----NPDGTLRE--AVIDGSEAKVIHDLAY----------YWPHYTPITYPADEDIMLFTMSKYTGHAGSR 202 (363)
T ss_pred EEEEEECCC----CCCCHHHH--HHCCCCCCEEEEEEEE----------ECCCCCCCCCCCCCCEEEEEECCCCCCCCCC
T ss_conf 289983899----98401336--6506998418875200----------0666667677776767989861223676252
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CC---CCHHHHH-CCHHHHHHHHHHHHCC--CEE-
Q ss_conf 432100-0111222223322345321111001233455432012-22---1011210-0002688999988679--707-
Q gi|254780432|r 253 IGACLA-TNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSD-GF---LENVINI-AKILFEGLTAIKNRFP--NMF- 323 (392)
Q Consensus 253 ~sav~~-~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~-~l---~~~~~~~-g~~l~~~L~~l~~~~~--~~v- 323 (392)
+|=.++ .++|++-+.....-+|-+-+--+-..|++.|+.+.+. +. -...-.- -+.+++++++|.+-.. +.+
T Consensus 203 iGWALVKD~~VakkM~~y~~lNt~GvS~dSQlRa~kiLkvv~~~~~~~~~~~~iF~fg~~~m~~RW~~L~~~v~~S~~Fs 282 (363)
T pfam04864 203 FGWALVKDEEVAKKMVEYIELNTIGVSKESQLRTLKILKVVLATCKTESGTMGFFDFGYQTMRERWERLRELVSSSTRFS 282 (363)
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 34788637999999999976505306889999999999999976326766235789999999999999999971158077
Q ss_pred ------------EEECCCE--EEEEEEECCC-HHHHHHHHHHCCEEEEE-----CCCCEEEECCCCCCCHHHHHHHHHHH
Q ss_conf ------------5504640--0999872499-89999999968989962-----68988995589868899999999999
Q gi|254780432|r 324 ------------LEVRGQG--LLIGLKTVFS-PALLAAKFRDECLLTAP-----SSDNVVRILPPLTITAEEIHEGLERI 383 (392)
Q Consensus 324 ------------~~vRG~G--l~~~ie~~~~-~~~~~~~l~~~Gll~~~-----~~~~~irl~Ppl~it~~eid~~i~~l 383 (392)
..+|.-- ..| +.|..+ .+...+.|++.+|+.++ .+.+-+|++ |.-++++.|.++++|
T Consensus 283 L~~~~p~yC~ff~~~~~~sPafaW-lkCe~eed~DC~~~L~~~~I~~r~G~~Fga~~~YVRlS--ll~~~d~Fd~lleRL 359 (363)
T pfam04864 283 LQKLPPEYCNYFKKIREPSPAYAW-LKCEWEEDTDCYEVLREGKILTRSGERFGADSRYVRLS--LIKTQDDFDQLLQRL 359 (363)
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEE-EEECCCCHHHHHHHHHHCCEECCCCCCCCCCCCEEEEE--EECCHHHHHHHHHHH
T ss_conf 267787766542321689986379-97266320179999987886456876458898769998--406887899999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780432|r 384 ERT 386 (392)
Q Consensus 384 ~~a 386 (392)
++-
T Consensus 360 ~~l 362 (363)
T pfam04864 360 KSL 362 (363)
T ss_pred HHH
T ss_conf 854
No 336
>KOG0629 consensus
Probab=91.15 E-value=1.3 Score=24.35 Aligned_cols=267 Identities=17% Similarity=0.201 Sum_probs=125.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCC
Q ss_conf 31235655540356777665432001----347860023435465654321234553211347------99986433322
Q gi|254780432|r 91 RVFFTNSGAESVECAIKTARRYHYMA----GKTNKFRIVTFEGAFHGRTLATISAGGKLQYLE------GFGPKIEGFDQ 160 (392)
Q Consensus 91 ~v~f~~SGseA~e~Aiklar~~~~~~----g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~------~~~p~~~~~~~ 160 (392)
-=.|+..||-+|..|+-+||.-+... |..+=+.+|-|. ++..|.+ .++.....+..
T Consensus 161 DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFt--------------SeesHYSi~kaAa~lg~gtd~c~~ 226 (510)
T KOG0629 161 DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFT--------------SEESHYSIKKAAAFLGLGTDHCIK 226 (510)
T ss_pred CCEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEE--------------CCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 865368840677899988876118424430020388578984--------------242012499999985668750688
Q ss_pred CCCHH-----HHHHHHHCC---CC--C----CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 21002-----688754101---23--3----2222333222211246210123221102234572131011003444455
Q gi|254780432|r 161 AKFCD-----LQSLKNQIS---ND--T----AAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG 226 (392)
Q Consensus 161 ~~~~d-----~~~l~~~~~---~~--i----Aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG 226 (392)
++-+. .+.|++.+. ++ + .|-.--+|.|. .-+ |..+.++|.+|+.-+-+|----| |
T Consensus 227 v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GA---FDd----L~~iadiC~k~~lWmHvDAAwGG----g 295 (510)
T KOG0629 227 VKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGA---FDD----LNGIADICEKHKLWMHVDAAWGG----G 295 (510)
T ss_pred ECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEC---CCC----HHHHHHHHHHCCEEEEEECCCCC----C
T ss_conf 325556865669999999988854899759982478666424---586----78899998754879995100055----5
Q ss_pred CCCCCC----CCCCC-CCEEE--CCCCCCCCCCCCCCCCCCCC-CCC---------CCCC-CCCCCCC-CC-CCCHHHHH
Q ss_conf 531011----12454-53021--03444444344321000111-222---------2233-2234532-11-11001233
Q gi|254780432|r 227 KLFAYE----WANVK-PDIMT--IAKGMGGGFPIGACLATNEV-AAC---------MNQG-SHGSTYG-GN-VLAMVLGE 286 (392)
Q Consensus 227 ~~f~~e----~~gi~-PDi~~--~gK~l~gG~P~sav~~~~~i-~~~---------~~~~-~~~~T~~-gn-pl~~aaa~ 286 (392)
-+.... ..|++ .|-++ --|-+|..+|+|+.+++++= ++. |++. .+--.|. |+ .+-|-.-.
T Consensus 296 lLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~ 375 (510)
T KOG0629 296 LLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHV 375 (510)
T ss_pred CCCCHHHHHHCCCCCCCCCEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCHHHCCCCC
T ss_conf 12475557640575325741166788645861245799887778876402002443146856521003563033247654
Q ss_pred HHHH--HHHC----CC---CCCHHHHHCCHHHHHHHHHHHHC------CCEEEEECCCEEEEEEE-------ECCCH---
Q ss_conf 4554--3201----22---21011210000268899998867------97075504640099987-------24998---
Q gi|254780432|r 287 KVLN--IIQS----DG---FLENVINIAKILFEGLTAIKNRF------PNMFLEVRGQGLLIGLK-------TVFSP--- 341 (392)
Q Consensus 287 a~L~--~l~~----~~---l~~~~~~~g~~l~~~L~~l~~~~------~~~v~~vRG~Gl~~~ie-------~~~~~--- 341 (392)
-+.+ ++.+ .+ -++++-++.++|.+++++--... |..+ .| .+|-++ ...+.
T Consensus 376 D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~-nv----~fw~vp~~lR~~~~~~e~~~r 450 (510)
T KOG0629 376 DVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHV-NV----CFWYVPPSLRGWQENPERDSR 450 (510)
T ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEE-EE----EECCCCHHHCCCCCCCHHHHH
T ss_conf 2999999997325625899999999999999999872656111013787547-87----504586676168646036667
Q ss_pred -----HHHHHHHHHCCEEEEE---CC--CC--EEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf -----9999999968989962---68--98--899558986889999999999999999
Q gi|254780432|r 342 -----ALLAAKFRDECLLTAP---SS--DN--VVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 342 -----~~~~~~l~~~Gll~~~---~~--~~--~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
-.+...+.++|....+ .+ +| ++-++|| .++++++|..++-|++.=.
T Consensus 451 L~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~-a~~~ad~dflldEIerlgq 508 (510)
T KOG0629 451 LVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNP-ALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred HHHHCCHHHHHHHHCCCEEEEECCCCCCCCHHHEECCCC-HHHHHHHHHHHHHHHHHCC
T ss_conf 774070879999754543567543555444131121561-0114658889999987515
No 337
>KOG0258 consensus
Probab=91.01 E-value=0.53 Score=26.99 Aligned_cols=198 Identities=20% Similarity=0.235 Sum_probs=99.1
Q ss_pred HHHHHHHHCCC------CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC-CCCCCCCC-CCCCCCC---
Q ss_conf 26887541012------3322223332222112462101232211022345721310110-03444455-5310111---
Q gi|254780432|r 165 DLQSLKNQISN------DTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV-QTGYGRTG-KLFAYEW--- 233 (392)
Q Consensus 165 d~~~l~~~~~~------~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV-~tG~GRtG-~~f~~e~--- 233 (392)
|.+.+++.+.+ --+.+|+.|..-.| ...+++-++.+...|.+++++|++||| |--..-.| +|+.+..
T Consensus 199 d~~el~~~~~eA~k~i~~r~lvvINPGNPTG--qvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~ 276 (475)
T KOG0258 199 DVAELERSVDEARKGINPRALVVINPGNPTG--QVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLH 276 (475)
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEECCCCCCC--HHHCHHHHHHHHHHHHHCCCEEECHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 8999999999986168841899977999611--45068779999999987370773268887632578760274999999
Q ss_pred -CC-CCCCE------EECCCCCCCCC-CCCCCC----CCCCCCCCCCCC---CCCCCC--------CCCCCCHHHHHHHH
Q ss_conf -24-54530------21034444443-443210----001112222233---223453--------21111001233455
Q gi|254780432|r 234 -AN-VKPDI------MTIAKGMGGGF-PIGACL----ATNEVAACMNQG---SHGSTY--------GGNVLAMVLGEKVL 289 (392)
Q Consensus 234 -~g-i~PDi------~~~gK~l~gG~-P~sav~----~~~~i~~~~~~~---~~~~T~--------~gnpl~~aaa~a~L 289 (392)
.| .-||= -..+|+.-|-. +-|+.. ...++.+.+... ...++- .-||-.-.-....+
T Consensus 277 emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~ 356 (475)
T KOG0258 277 EMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDL 356 (475)
T ss_pred HHCCCCCCCEEEEEEECCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCEECCCCCCCCCCHHH
T ss_conf 84686778557766103552211230556773211058827877789887564166753225332015899999842666
Q ss_pred HHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECC-CH--------------HHHHHHHH-HCCE
Q ss_conf 43201222101121000026889999886797075504640099987249-98--------------99999999-6898
Q gi|254780432|r 290 NIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVF-SP--------------ALLAAKFR-DECL 353 (392)
Q Consensus 290 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~-~~--------------~~~~~~l~-~~Gl 353 (392)
..=+++.+.+..+.+.+.+.+.++++ ++ +..-.-.|.|..+.-.. +. .-.+.+|+ .-||
T Consensus 357 ~~~Ekd~il~~l~~ra~l~~~~~ns~----~g-i~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGI 431 (475)
T KOG0258 357 FSSEKDGILSSLRSRAKLTEDAFNSL----EG-ISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGI 431 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC----CC-EEECCCCCCEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCE
T ss_conf 66666768999987628899987505----76-46326762235345346788899999970899708999999976575
Q ss_pred EEEECCC-----C----EEEECCCC
Q ss_conf 9962689-----8----89955898
Q gi|254780432|r 354 LTAPSSD-----N----VVRILPPL 369 (392)
Q Consensus 354 l~~~~~~-----~----~irl~Ppl 369 (392)
.+.|..+ . +..|.||-
T Consensus 432 cvVPGSGFGQ~~GtyH~R~TiLp~~ 456 (475)
T KOG0258 432 CVVPGSGFGQKEGTYHFRTTILPPG 456 (475)
T ss_pred EEECCCCCCCCCCEEEEEEEECCCH
T ss_conf 8834887788985048888625706
No 338
>TIGR00474 selA L-seryl-tRNA selenium transferase; InterPro: IPR004534 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homolog of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N-terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pyloriputative SelA.; GO: 0004125 L-seryl-tRNASec selenium transferase activity, 0001514 selenocysteine incorporation, 0005737 cytoplasm.
Probab=89.89 E-value=1.7 Score=23.65 Aligned_cols=273 Identities=15% Similarity=0.180 Sum_probs=140.3
Q ss_pred CCEEEEC---CCCEEEECHHHHHHHCCCCC--CHHHHHHHHHHHHHCCCCCC---CCC-CHHHHHHHHHHHHHCCCCCCC
Q ss_conf 0379967---99764641022674357878--99999999999973145068---757-818999998652010133312
Q gi|254780432|r 23 GAWLFSE---NGIPFLDFASGIAVNSLGHS--HPELVAILKSQSEKLWHVSN---LYQ-STQQEIFANHLIHSTFADRVF 93 (392)
Q Consensus 23 G~~i~d~---dG~~yiD~~~g~~~~~lGh~--~p~i~~a~~~q~~~~~~~~~---~~~-~~~~~~la~~L~~~~~~~~v~ 93 (392)
++++.+. .=|..|...+-.-.+|||-+ =+++.+|+.+.++.....-+ -.. ......+++.||+.++.+-.+
T Consensus 48 ~~~L~~~~Q~~ik~Vin~tG~vLnTnlGra~~ae~v~~a~~~~~~~~v~LEY~L~~~gRG~R~~~i~~lLc~lTgae~~c 127 (448)
T TIGR00474 48 KSFLKKEAQVAIKRVINLTGTVLNTNLGRALFAEAVNEAISEAMRKYVNLEYDLDEGGRGHRDAHIEKLLCKLTGAEDAC 127 (448)
T ss_pred ECEECHHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCE
T ss_conf 03415145688865421267365300144367999999999986257753110211575317899999987532862330
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 356555403567776654320013478600234354-6565432123455321134799986433322210026887541
Q gi|254780432|r 94 FTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEG-AFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQ 172 (392)
Q Consensus 94 f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~-~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~ 172 (392)
..|.=+-||=.++-.+ ..||..|+++=. -=||-. . -.|...+.-+-....+-+..--.....+..
T Consensus 128 vvnNna~avlL~l~~~--------a~GKeVi~srGEL~eiGg~---f---Ripdim~~~g~~l~eVGttn~t~~~Dy~~a 193 (448)
T TIGR00474 128 VVNNNAAAVLLMLATL--------AKGKEVIISRGELVEIGGA---F---RIPDIMKQAGCELDEVGTTNRTHVKDYRVA 193 (448)
T ss_pred EEECHHHHHHHHHHHH--------CCCCEEEEECCCCCCCCCC---C---CCHHHHHHCCCEEEECCCHHHHHHHHHHHH
T ss_conf 4423389999999996--------0798799978865789875---6---544889653856510110120004467776
Q ss_pred CCCCCCCCC-CCC--CCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC---CC--------
Q ss_conf 012332222-333--2222112462101232211022345721310110034444555310111245---45--------
Q gi|254780432|r 173 ISNDTAAIL-IEP--IQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV---KP-------- 238 (392)
Q Consensus 173 ~~~~iAavi-~Ep--v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi---~P-------- 238 (392)
+.+++|-.- +|. .+- -|.. ..-=...|-+|=+++|++.+.|. - +|.+---..||+ +|
T Consensus 194 i~~nTa~Lmkvh~sNf~~-~gft--~~~~eeeLv~LG~~~~~pv~~D~-g-----SG~LvdL~~~gL~~~eP~~~~~i~~ 264 (448)
T TIGR00474 194 ITENTALLMKVHLSNFKI-VGFT--AKVKEEELVKLGKELDVPVVTDL-G-----SGLLVDLSQYGLPKNEPNVQEAIAL 264 (448)
T ss_pred HHHHHHHHHHHHHCCCCE-EEEC--CCCCHHHHHHHHHHCCCEEEEEC-C-----CCCHHHHHHCCCCCCCCCCCHHHHC
T ss_conf 531034444443016625-6521--11577899973223377079987-7-----6621225441666688971068866
Q ss_pred --CEEECC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCHHH------HHCCH
Q ss_conf --302103--44444434432100011122222332234532111100123345543201-22210112------10000
Q gi|254780432|r 239 --DIMTIA--KGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS-DGFLENVI------NIAKI 307 (392)
Q Consensus 239 --Di~~~g--K~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~-~~l~~~~~------~~g~~ 307 (392)
|+|.+| |=| ||--.|-++|++++.+-++.-..-.-....|+..|+--+||+.+-. |.+.|++. +-.+.
T Consensus 265 G~dLVs~SgDKLL-gGpqaGiivGKKeli~ki~~~p~kr~Lr~dk~~LAGle~tLkly~~PEkl~E~ip~lr~ltr~~~~ 343 (448)
T TIGR00474 265 GVDLVSFSGDKLL-GGPQAGIIVGKKELIEKIQIHPLKRALRADKLTLAGLEATLKLYLNPEKLLEKIPTLRLLTRAKKF 343 (448)
T ss_pred CCCEEECCCCCCC-CCCCCCEEECCHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHCCHHHH
T ss_conf 9857861651004-676503462307899998547862210124167999999997415802430442155653034889
Q ss_pred HHHHHHHHHHHC
Q ss_conf 268899998867
Q gi|254780432|r 308 LFEGLTAIKNRF 319 (392)
Q Consensus 308 l~~~L~~l~~~~ 319 (392)
++...++|.+..
T Consensus 344 ~~~~a~rL~~~L 355 (448)
T TIGR00474 344 LRIKAERLEKEL 355 (448)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999988875
No 339
>COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only]
Probab=85.99 E-value=0.93 Score=25.40 Aligned_cols=200 Identities=21% Similarity=0.261 Sum_probs=101.0
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHH-HCCCCC--CCCCCHHHHHHHHHH---HHHCCCCC---CCCCCCCCC
Q ss_conf 997646410226743578789999999999997-314506--875781899999865---20101333---123565554
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSE-KLWHVS--NLYQSTQQEIFANHL---IHSTFADR---VFFTNSGAE 100 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~-~~~~~~--~~~~~~~~~~la~~L---~~~~~~~~---v~f~~SGse 100 (392)
.|=-|||-. |..--|++-+.+-+|+.+--. ++...+ +.+.......+.+-+ ++..+.|. -.+-+=++|
T Consensus 46 ~GiNyidTA---~~Yh~g~sE~~lgkaL~~~~Rekv~LaTKlp~~~~~~~edm~r~fneqLekl~~Dy~D~yliH~l~~e 122 (391)
T COG1453 46 HGINYIDTA---WPYHGGESEEFLGKALKDGYREKVKLATKLPSWPVKDREDMERIFNEQLEKLGTDYIDYYLIHGLNTE 122 (391)
T ss_pred CCCCEEEEC---CCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHH
T ss_conf 287647620---32458874699999864215113798740587534479999999999999848861010201114677
Q ss_pred CHHHHHHH-HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH--------HHHHH
Q ss_conf 03567776-6543200134786002343546565432123455321134799986433322210026--------88754
Q gi|254780432|r 101 SVECAIKT-ARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDL--------QSLKN 171 (392)
Q Consensus 101 A~e~Aikl-ar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~--------~~l~~ 171 (392)
--|-..++ +.-+-......||-+.+.| ||||.+-.- .+......-+|.++.++.+ +.++.
T Consensus 123 ~~~k~~~~g~~df~~kak~eGkIr~~GF--SfHgs~e~~---------~~iv~a~~~dfvqlq~ny~d~~n~~~~~~l~~ 191 (391)
T COG1453 123 TWEKIERLGVFDFLEKAKAEGKIRNAGF--SFHGSTEVF---------KEIVDAYPWDFVQLQYNYIDQKNQAGTEGLKY 191 (391)
T ss_pred HHHHHHCCCHHHHHHHHHHCCCEEEEEE--CCCCCHHHH---------HHHHHCCCCCEEEEEEEEECCCHHCCCHHHHH
T ss_conf 8999970374899999985696788631--578978999---------99996388616886421014000122279999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 10123322223332222112462101232211022345721310110034444555310111245453021034444443
Q gi|254780432|r 172 QISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGF 251 (392)
Q Consensus 172 ~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~ 251 (392)
.-..+.+-|||||.-|-+=...+|+ ++.++|++++.- ||=.-|+..+.-=-|-+.++.
T Consensus 192 A~~~~~gI~IMeP~~gG~l~~~vP~----~~~~l~~~~~~~-----------~sP~~wa~R~~~shp~V~~vl------- 249 (391)
T COG1453 192 AASKGLGIFIMEPLDGGGLLYNVPE----KLEELCRPASPK-----------RSPAEWALRYLLSHPEVTTVL------- 249 (391)
T ss_pred HHHCCCCEEEEEECCCCCCCCCCCH----HHHHHHHHCCCC-----------CCCHHHHHHHHHCCCCEEEEE-------
T ss_conf 9867995799843788874467879----999998744877-----------896899999985588737982-------
Q ss_pred CCCCCCCCCCCCCCCC
Q ss_conf 4432100011122222
Q gi|254780432|r 252 PIGACLATNEVAACMN 267 (392)
Q Consensus 252 P~sav~~~~~i~~~~~ 267 (392)
|++-..+++.+.++
T Consensus 250 --sGm~~~~~l~enLk 263 (391)
T COG1453 250 --SGMNTPEQLEENLK 263 (391)
T ss_pred --CCCCCHHHHHHHHH
T ss_conf --48898889888899
No 340
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=81.03 E-value=4.7 Score=20.78 Aligned_cols=279 Identities=17% Similarity=0.162 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf 9999986520101333123565554-0356777665432001347860023435465654321234553-2113479998
Q gi|254780432|r 76 QEIFANHLIHSTFADRVFFTNSGAE-SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGG-KLQYLEGFGP 153 (392)
Q Consensus 76 ~~~la~~L~~~~~~~~v~f~~SGse-A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~-~~~~~~~~~p 153 (392)
..+..+...+..+.|+.+|...||. ||.+.+ +|- . +...+|+.-++ -|=+-...+.++| .|-|..+..
T Consensus 72 i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi-~a~-----~--~~GD~VLvdRN-~HKSi~~glilaGa~Pvyl~p~~- 141 (557)
T COG1982 72 IKEAQELAARVFGADHTYFVVNGTSTANKAVI-NAV-----L--TPGDKVLVDRN-CHKSIHHGLILAGATPVYLEPSR- 141 (557)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH-HHH-----C--CCCCEEEECCC-CCHHHHHHHHHCCCCEEEECCCC-
T ss_conf 88999999998688862999778228999999-860-----3--89998996587-63788889987488327841777-
Q ss_pred CCCCCCCCCCHHHHHHHHHC-CCC---CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC
Q ss_conf 64333222100268875410-123---32222333222211246210123221102234572131011003444455531
Q gi|254780432|r 154 KIEGFDQAKFCDLQSLKNQI-SND---TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF 229 (392)
Q Consensus 154 ~~~~~~~~~~~d~~~l~~~~-~~~---iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f 229 (392)
.+.+...---+.+.+++.+ .+. -+++|.-|-. .|+.- . ++++.+.+.++++.+..||- -| -+|
T Consensus 142 -np~~gi~ggI~~~~~~~al~~~~~~~k~~vitnpTY--dGv~~-n---~~~i~~~~~~~~a~v~~dea-h~-----~~~ 208 (557)
T COG1982 142 -NPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY--DGVCY-N---LRKIVELLHHYGAWVLYDEA-HP-----AHF 208 (557)
T ss_pred -CCCCCCCCCCCHHHHHHHHHHCHHHHHEEEEECCCC--CEEEE-C---HHHHHHHHHHCCCEEEHHHC-CC-----CCC
T ss_conf -854465378698998799984713040688964853--24760-5---99999997531866888645-77-----433
Q ss_pred CCCC------CCCCCCEEECC--CCCCCCCCCCCCCCCCC--CC-CCCCCC--CCCCCCCCCCCCHHHHHHHHHH---HH
Q ss_conf 0111------24545302103--44444434432100011--12-222233--2234532111100123345543---20
Q gi|254780432|r 230 AYEW------ANVKPDIMTIA--KGMGGGFPIGACLATNE--VA-ACMNQG--SHGSTYGGNVLAMVLGEKVLNI---IQ 293 (392)
Q Consensus 230 ~~e~------~gi~PDi~~~g--K~l~gG~P~sav~~~~~--i~-~~~~~~--~~~~T~~gnpl~~aaa~a~L~~---l~ 293 (392)
.+.. ..-.-|++|-| |.|++.--.|.+-.++. +- +.++.. .|.|| +|.- ...|+||. ++
T Consensus 209 ~~~~~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~ST---SPsY--~l~ASlD~Ar~~~ 283 (557)
T COG1982 209 DFSPMLPESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQST---SPSY--PLMASLDVARMQE 283 (557)
T ss_pred CCCCCCCCHHHHCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC---CCHH--HHHHHHHHHHHHH
T ss_conf 5555574114545743898105442123436678750887657789999999988067---9558--9998899999875
Q ss_pred C---CCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEE------EEEE--------------------EECCCHHHH
Q ss_conf 1---2221011210000268899998867970755046400------9998--------------------724998999
Q gi|254780432|r 294 S---DGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGL------LIGL--------------------KTVFSPALL 344 (392)
Q Consensus 294 ~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl------~~~i--------------------e~~~~~~~~ 344 (392)
. ..+++.+-..+-.+++.+++...+.+ .+ .+-+-+- .-|+ ++--+...+
T Consensus 284 ~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~-~~-~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v 361 (557)
T COG1982 284 GNAGRELWQEVIDEAIDFRKALRRLINEIG-FF-PVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIV 361 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHH
T ss_conf 433478888889999999999999887648-86-4026655577533222122344542036607999657789739999
Q ss_pred HHHHHHCCEEEEECCCCEE-EECCCCC-CCHHHHHHHHHHHH
Q ss_conf 9999968989962689889-9558986-88999999999999
Q gi|254780432|r 345 AAKFRDECLLTAPSSDNVV-RILPPLT-ITAEEIHEGLERIE 384 (392)
Q Consensus 345 ~~~l~~~Gll~~~~~~~~i-rl~Ppl~-it~~eid~~i~~l~ 384 (392)
++.|+++|++...++++.+ -+.+|.+ -+..+++.+++.+.
T Consensus 362 ~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 362 AKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHHHHHCCCEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 999997588145317732467863241067899999999987
No 341
>PRK13475 ribulose bisphosphate carboxylase; Provisional
Probab=80.14 E-value=1.7 Score=23.65 Aligned_cols=91 Identities=16% Similarity=0.215 Sum_probs=53.2
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCC-CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 55531011124545302103444444-34-43210001112222233223453211110012334554320122210112
Q gi|254780432|r 225 TGKLFAYEWANVKPDIMTIAKGMGGG-FP-IGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVI 302 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~~~gK~l~gG-~P-~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~ 302 (392)
.|.+|-++|.++.|=+-+.|-|+..| +| +=-.+++.+++..+..+.+|+-.+ +..++.|-..++|-.....-++...
T Consensus 349 ~g~~f~Qdw~~m~~v~PV~SGG~h~g~~p~~~~~lG~~dvi~~~GGGi~GHP~G-~aaGA~A~RqA~EA~~ag~~l~e~A 427 (459)
T PRK13475 349 DGPFYHQEWLGMKPTTPIISGGMNALRLPGFFDNLGHGNVINTAGGGAFGHIDG-PAAGAKSLRQAYECWKAGADPVEYA 427 (459)
T ss_pred CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-HHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 688656754458885465377712406789999839987899689851279986-5888999999999998399879997
Q ss_pred HHCCHHHHHHHHHH
Q ss_conf 10000268899998
Q gi|254780432|r 303 NIAKILFEGLTAIK 316 (392)
Q Consensus 303 ~~g~~l~~~L~~l~ 316 (392)
+-++.|...|+.+.
T Consensus 428 k~h~EL~~Al~~f~ 441 (459)
T PRK13475 428 KDHKEFARAFESFP 441 (459)
T ss_pred HHCHHHHHHHHHCC
T ss_conf 53799999999766
No 342
>TIGR00693 thiE thiamine-phosphate pyrophosphorylase; InterPro: IPR003733 Thiamine monophosphate synthase (TMP) (2.5.1.3 from EC) catalyzes the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl)thiazole phosphate to yield thiamine phosphate in the thiamine biosynthesis pathway . TENI, a protein from Bacillus subtilis that regulates the production of several extracellular enzymes by reducing alkaline protease production belongs to this group .; GO: 0004789 thiamin-phosphate diphosphorylase activity, 0009228 thiamin biosynthetic process.
Probab=80.05 E-value=0.53 Score=26.99 Aligned_cols=120 Identities=20% Similarity=0.232 Sum_probs=60.7
Q ss_pred CHHHHHHHHCCCCCCCCEEEECC-CCCCC--CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-C----------
Q ss_conf 10123221102234572131011-00344--4455531011124545302103444444344321000-1----------
Q gi|254780432|r 195 PEEFLQQLRKICDDIDALLIFDE-VQTGY--GRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLAT-N---------- 260 (392)
Q Consensus 195 ~~~~l~~l~~lc~~~g~llI~DE-V~tG~--GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~-~---------- 260 (392)
--+.-+.+|+||++||++||++. |.=.. +==|--.|++...+. ..=|-+|...=+|.-+.+ +
T Consensus 51 ~~~~A~~l~~lc~~y~~~f~vND~vdlA~~~~ADGvHlGQ~D~p~~----~aR~l~G~~~iiG~S~~~~~e~~~a~~C~~ 126 (210)
T TIGR00693 51 RLELAEKLRELCRKYGVPFIVNDRVDLALALGADGVHLGQDDLPVS----EARKLLGPDKIIGVSTHNLEELAEAAACEL 126 (210)
T ss_pred HHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCEEEECCCCCCHH----HHHHHCCCCCEEEEEECCHHHHHHHHHHHH
T ss_conf 9999999999998708976882839999983798776678889989----999853899579853379899999998764
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCHHHHHCCHHHHHHHHHHHH
Q ss_conf -1122222332234532111100123345543201222-101121000026889999886
Q gi|254780432|r 261 -EVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGF-LENVINIAKILFEGLTAIKNR 318 (392)
Q Consensus 261 -~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l-~~~~~~~g~~l~~~L~~l~~~ 318 (392)
+-.|-+.-|....|.+-....-.+++..|+.+.+... ---+-.+|-.=.+.+.++...
T Consensus 127 ~~gaDY~G~Gp~fpT~TK~~~~~~~g~e~l~~~~~~~~h~~P~VAIGGI~~~n~~~v~~~ 186 (210)
T TIGR00693 127 KEGADYIGVGPIFPTPTKKDAAPPVGLELLREIAATSIHDIPIVAIGGITLENVAEVLAA 186 (210)
T ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHC
T ss_conf 078988886371158878898776488899999986178876588759887899999972
No 343
>KOG2433 consensus
Probab=78.13 E-value=3.3 Score=21.84 Aligned_cols=16 Identities=25% Similarity=0.310 Sum_probs=7.4
Q ss_pred EEEECCCCCCCHHHHHH
Q ss_conf 89955898688999999
Q gi|254780432|r 362 VVRILPPLTITAEEIHE 378 (392)
Q Consensus 362 ~irl~Ppl~it~~eid~ 378 (392)
.+.+-|.++= .+||.-
T Consensus 530 FLILDPHYTG-aeDl~t 545 (577)
T KOG2433 530 FLILDPHYTG-AEDLKT 545 (577)
T ss_pred EEEECCCCCC-HHHHHH
T ss_conf 9995787677-466777
No 344
>cd03318 MLE Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway. This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion.
Probab=77.68 E-value=0.39 Score=27.88 Aligned_cols=90 Identities=17% Similarity=0.169 Sum_probs=50.2
Q ss_pred CCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6210123221102234572131011003444455531011124-545302103444444344321000111222223322
Q gi|254780432|r 193 KVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWAN-VKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSH 271 (392)
Q Consensus 193 ~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~g-i~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~ 271 (392)
|.+++-+..+++++++.++.+..||..++....-.+......+ ++||+.-+| |++...-++.++-...+ ..+
T Consensus 222 P~~~~d~~~~~~l~~~~~ipIa~gE~~~~~~~~~~~i~~~a~div~~d~~~~G-Git~~~kia~~A~~~gi------~~~ 294 (365)
T cd03318 222 PVPRENLDGLARLRSRNRVPIMADESVSGPADAFELARRGAADVFSLKIAKSG-GLRRAQKVAAIAEAAGI------ALY 294 (365)
T ss_pred CCCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCC-CHHHHHHHHHHHHHCCC------CEE
T ss_conf 99953699999886258988893788799999999987334442353236679-78999999999998699------364
Q ss_pred CCCCCCCCCCHHHHHHHH
Q ss_conf 345321111001233455
Q gi|254780432|r 272 GSTYGGNVLAMVLGEKVL 289 (392)
Q Consensus 272 ~~T~~gnpl~~aaa~a~L 289 (392)
.+++-+.+++.++++...
T Consensus 295 ~~~~~~~~i~~aa~~h~~ 312 (365)
T cd03318 295 GGTMLESSIGTAASAHLF 312 (365)
T ss_pred ECCCCCCHHHHHHHHHHH
T ss_conf 589877689999999999
No 345
>cd02691 PurM-like2 AIR synthase (PurM) related protein, archaeal subgroup 2 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain.
Probab=77.46 E-value=6 Score=20.11 Aligned_cols=67 Identities=21% Similarity=0.364 Sum_probs=36.8
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCEEEECCC-------------CCCCCCCCCCCC--CCCCCCCC-CEEECCCCCCCC-C
Q ss_conf 112462101232211022345721310110-------------034444555310--11124545-302103444444-3
Q gi|254780432|r 189 GGVRKVPEEFLQQLRKICDDIDALLIFDEV-------------QTGYGRTGKLFA--YEWANVKP-DIMTIAKGMGGG-F 251 (392)
Q Consensus 189 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEV-------------~tG~GRtG~~f~--~e~~gi~P-Di~~~gK~l~gG-~ 251 (392)
+.....=.++.+.+.+.|+++|+.+|.=++ ..|.+--|..-. ....+.+| |.+.++.+++++ .
T Consensus 98 g~~~~~L~~i~~~m~~aa~~~gV~iV~GdT~vv~gd~v~g~~i~~~v~~iGv~~~~~~~~~~ArpGD~IlvsggiGg~~i 177 (346)
T cd02691 98 DGDVGKLFDFTAGVTAVSEATGVPLVAGSTLRIGGDMVLGDRLVGGVGAVGRSKSDPSRRKNAEPGDLILMTEGAGGGTI 177 (346)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHH
T ss_conf 99999999999999999998599897147368369946643689988887740477641147999999999788784178
Q ss_pred CCCC
Q ss_conf 4432
Q gi|254780432|r 252 PIGA 255 (392)
Q Consensus 252 P~sa 255 (392)
...+
T Consensus 178 a~~a 181 (346)
T cd02691 178 TTTA 181 (346)
T ss_pred HHHH
T ss_conf 8999
No 346
>KOG4166 consensus
Probab=75.32 E-value=1 Score=25.07 Aligned_cols=66 Identities=32% Similarity=0.566 Sum_probs=40.9
Q ss_pred CCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC-CCCEEECCCCCCC---CCC--CCCCCCCCC
Q ss_conf 462101232211022345721310110034444555310111245-4530210344444---434--432100011
Q gi|254780432|r 192 RKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV-KPDIMTIAKGMGG---GFP--IGACLATNE 261 (392)
Q Consensus 192 ~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi-~PDi~~~gK~l~g---G~P--~sav~~~~~ 261 (392)
-.+|..-.+.|-++.+..+-..|+ .||.|.. .||+-|+|.- +|--...+-+||- |+| ++|-+.+.+
T Consensus 471 ~ikPQ~vIk~Ldk~t~d~~~kvii---tTGVGqH-QMWAAqfy~w~kP~~~~tSGGLGtMGfGLPAAIGAsVA~P~ 542 (675)
T KOG4166 471 AIKPQYVIKVLDKLTDDTGRKVII---TTGVGQH-QMWAAQFYNWKKPRQWLTSGGLGTMGFGLPAAIGASVANPD 542 (675)
T ss_pred CCCHHHHHHHHHHHCCCCCCEEEE---ECCCCHH-HHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCC
T ss_conf 468489999998752576763899---6264277-88898872546841113058743234686065402426865
No 347
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase; InterPro: IPR012733 4-hydroxybenzoate 3-monooxygenase is a flavoprotein that converts its substrate to 3,4-dihydroxybenzoate, which subsequently enters the beta-ketioadipate pathway of aromatic degradation, using molecular oxygen and NADPH as shown below . 4-hydroxybenzoate + NADPH + O(2) = 3,4-dihydroxybenzoate + NADP(+) + H(2)O 4-hydroxybenzoate is an intermediate in the degradation of lignin and other aromatic plant compounds, and this enzyme is found extensively in soil bacteria. This enzyme is a homodimer where each subunit is composed of three distinct domains: an N-terminal flavin-binding domain with a beta-alpha-beta fold, a small substrate-binding domain composed of a single alpha helix and beta-sheet, and a C-terminal helical domain . The active site is found at the interface of all three domains. Catalysis occurs by a two-step reaction. In the first step, flavin is reduced by NADPH. Subsequently, the reduced flavin is oxygenated to a hydroperoxide which transfers the hydroxyl group to the substrate, forming 3,4-dihydroxybenzoate.; GO: 0018659 4-hydroxybenzoate 3-monooxygenase activity, 0050660 FAD binding, 0043639 benzoate catabolic process.
Probab=73.21 E-value=5 Score=20.61 Aligned_cols=102 Identities=17% Similarity=0.130 Sum_probs=54.4
Q ss_pred CCCEEEECCCCEEEECHHHHH-HHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCCCCCCCC
Q ss_conf 103799679976464102267-4357878999999999999731450687578189999986520101-33312356555
Q gi|254780432|r 22 KGAWLFSENGIPFLDFASGIA-VNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTF-ADRVFFTNSGA 99 (392)
Q Consensus 22 ~G~~i~d~dG~~yiD~~~g~~-~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~-~~~v~f~~SGs 99 (392)
+|.-|-..+-+.=|||..--+ ..-+=|+.-||.+=+-++-+.... ..+|. ...+.+- .+....| .-+|-|...|.
T Consensus 73 ~G~~ia~~g~~~riDl~~~tGG~~V~VYGQTEvtrDL~~ARe~~G~-~~v~~-a~~V~~H-D~~~~~P~gc~VT~~~dG~ 149 (393)
T TIGR02360 73 EGIEIAFDGQRFRIDLKALTGGKTVMVYGQTEVTRDLYEAREQAGL-KTVYD-ADDVRLH-DLAGDRPEGCHVTFERDGE 149 (393)
T ss_pred CCEEEECCCCEEECCHHHHCCCCEEEEECCHHHHHHHHHHHHHCCC-CEEEE-CCCCCCC-CCCCCCCCCCEEEEEECCC
T ss_conf 5654501782420007660589789997661577889999986389-55641-1432112-6567888952587778791
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 40356777665432001347860023435465654321234553
Q gi|254780432|r 100 ESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGG 143 (392)
Q Consensus 100 eA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~ 143 (392)
+- +--+..|+=..||||-+=.++-..-
T Consensus 150 ~~-----------------~~dCDfIAGCDGFHGvSR~siP~~~ 176 (393)
T TIGR02360 150 EH-----------------RIDCDFIAGCDGFHGVSRASIPAEV 176 (393)
T ss_pred EE-----------------EEEEEEEECCCCCCCCCCCCCCHHH
T ss_conf 77-----------------7640267527888686544565124
No 348
>cd02197 HypE HypE (Hydrogenase expression/formation protein). HypE is involved in Ni-Fe hydrogenase biosynthesis. HypE dehydrates its own carbamoyl moiety in an ATP-dependent process to yield the enzyme thiocyanate. The N-terminal domain of HypE is related to the ATP-binding domains of the AIR synthases, selenophosphate synthetase (SelD), and FGAM synthase and is thought to bind ATP.
Probab=72.68 E-value=1.8 Score=23.52 Aligned_cols=76 Identities=18% Similarity=0.305 Sum_probs=42.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCC---C----HHHHHHHHCCCCCCCCEEEECCC--------------CCCCCCCCCCCCCC
Q ss_conf 123322223332222112462---1----01232211022345721310110--------------03444455531011
Q gi|254780432|r 174 SNDTAAILIEPIQGEGGVRKV---P----EEFLQQLRKICDDIDALLIFDEV--------------QTGYGRTGKLFAYE 232 (392)
Q Consensus 174 ~~~iAavi~Epv~g~~G~~~~---~----~~~l~~l~~lc~~~g~llI~DEV--------------~tG~GRtG~~f~~e 232 (392)
-.|||+.=.+|..-.-....| | .+.++.+++.|++||+.+|==++ .|++|+.-+--...
T Consensus 67 ~sDIaamGa~P~~~l~sl~lp~~~~~~~l~~i~~Gi~~~~~~~gv~iVGGdT~v~~~~~~~~l~is~t~iG~v~~~~~~~ 146 (293)
T cd02197 67 VNDLAMMGAKPLYLSLGFILEEGFPLEDLERIVKSMAEAAREAGVKIVTGDTKVVPKGKADGIFINTTGIGVIPRGVIIS 146 (293)
T ss_pred HHHHHHCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCEEECCCCCCCCEEEEEEEEEEECCCCCCC
T ss_conf 87898659975676375655899999999999999999999719768616627514787785599867889856885503
Q ss_pred CCCCCC-CEEECCCCCCC
Q ss_conf 124545-30210344444
Q gi|254780432|r 233 WANVKP-DIMTIAKGMGG 249 (392)
Q Consensus 233 ~~gi~P-Di~~~gK~l~g 249 (392)
..+.+| |.+++.|.+|.
T Consensus 147 ~~gA~pGD~iivTg~lG~ 164 (293)
T cd02197 147 PSNIRPGDKIIVSGTIGD 164 (293)
T ss_pred CCCCCCCCEEEEECCHHH
T ss_conf 578999999999686078
No 349
>pfam06838 Alum_res Aluminium resistance protein. This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria.
Probab=72.40 E-value=8.1 Score=19.25 Aligned_cols=200 Identities=19% Similarity=0.242 Sum_probs=99.4
Q ss_pred CCCHHHHHHHHHH-HHHCC-CCCCCCCC--HHHHHHHHHHHHHCCCCC--CCC-CCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 7899999999999-97314-50687578--189999986520101333--123-56555403567776654320013478
Q gi|254780432|r 48 HSHPELVAILKSQ-SEKLW-HVSNLYQS--TQQEIFANHLIHSTFADR--VFF-TNSGAESVECAIKTARRYHYMAGKTN 120 (392)
Q Consensus 48 h~~p~i~~a~~~q-~~~~~-~~~~~~~~--~~~~~la~~L~~~~~~~~--v~f-~~SGseA~e~Aiklar~~~~~~g~t~ 120 (392)
+|.-+|++|+++. +.... ..++.|.. .-++.|.+-.++.++.+. |+. ..|||-|.-.|+--.. ++|
T Consensus 25 ~Nq~KVL~Af~~~~vs~~hf~~sTGYGy~D~GRd~Le~vyA~vfgaE~ALVR~q~vSGTHAi~~aLfg~L-------rPG 97 (405)
T pfam06838 25 YNQLKVLNAFQEHRVSDSHFTGSTGYGYDDIGRDTLERVYARVFGAEAALVRPQFVSGTHAIATALFGVL-------RPG 97 (405)
T ss_pred HHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCC-------CCC
T ss_conf 9999999999980977766688887787764689999999999673776503432552899999998367-------899
Q ss_pred CCCCCCCCCC-CCCCCCCC-CCCCCCC-CCCCCCCCCCCCCCCC--CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---
Q ss_conf 6002343546-56543212-3455321-1347999864333222--1002688754101233222233322221124---
Q gi|254780432|r 121 KFRIVTFEGA-FHGRTLAT-ISAGGKL-QYLEGFGPKIEGFDQA--KFCDLQSLKNQISNDTAAILIEPIQGEGGVR--- 192 (392)
Q Consensus 121 r~~ii~~~~~-yHG~t~~a-~s~s~~~-~~~~~~~p~~~~~~~~--~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~--- 192 (392)
-. +++..|. |- |+-. +-+.++. .-.+.|+-....++-. ...|.+.+++.+.+++-.+.+ |-+-|.-
T Consensus 98 D~-ll~itG~PYD--TL~eVIGi~g~~~GSL~e~Gv~Y~~v~L~~~g~~D~~~i~~ai~~~tk~v~I---QRS~GYs~R~ 171 (405)
T pfam06838 98 DE-LLYITGKPYD--TLEEVIGIRGEGQGSLKDFGIGYREVPLLENGKVDWQAVKTAITPNTKLIGI---QRSKGYAWRP 171 (405)
T ss_pred CE-EEECCCCCCH--HHHHHHCCCCCCCCCHHHHCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEE---ECCCCCCCCC
T ss_conf 87-8744899736--5898718588998888995966036435778984999999761756459999---6256866688
Q ss_pred CCCHHHHHHHHCCCCCC--CCEEEECCCCCCCCCCCCCCC-CCCCCCCCCEEE--CCCCCCCCC-CCCC-CCCCCCCCCC
Q ss_conf 62101232211022345--721310110034444555310-111245453021--034444443-4432-1000111222
Q gi|254780432|r 193 KVPEEFLQQLRKICDDI--DALLIFDEVQTGYGRTGKLFA-YEWANVKPDIMT--IAKGMGGGF-PIGA-CLATNEVAAC 265 (392)
Q Consensus 193 ~~~~~~l~~l~~lc~~~--g~llI~DEV~tG~GRtG~~f~-~e~~gi~PDi~~--~gK~l~gG~-P~sa-v~~~~~i~~~ 265 (392)
..+.+=++++.+..|+. +++..+|-.. |+|-- .|--.+-.|+++ +=|..|||+ |.|+ +++++++.+.
T Consensus 172 slsi~~I~~~i~~vk~~~pd~ivfVDNCY------GEFvE~~EP~~vGADliaGSLIKNpGGgiaptGGYIaGk~dlVe~ 245 (405)
T pfam06838 172 SLTIAEIKEMIKFVKEINPNVIVFVDNCY------GEFVETKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKEELVEQ 245 (405)
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEECCC------CCCCCCCCCCCCCHHHEECCCEECCCCCCCCCCCEEECHHHHHHH
T ss_conf 87999999999999976899399997886------020267585301634401201247997736757778536999999
Q ss_pred C
Q ss_conf 2
Q gi|254780432|r 266 M 266 (392)
Q Consensus 266 ~ 266 (392)
.
T Consensus 246 a 246 (405)
T pfam06838 246 A 246 (405)
T ss_pred H
T ss_conf 8
No 350
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase; InterPro: IPR006238 This group of sequences represent cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys..
Probab=70.35 E-value=5.3 Score=20.45 Aligned_cols=288 Identities=17% Similarity=0.191 Sum_probs=160.1
Q ss_pred CCCCHHHHHHHHHHHHHCCC--CCCCCCCCCCCCHHHHHH---HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 75781899999865201013--331235655540356777---6654320013478600234354656543212345532
Q gi|254780432|r 70 LYQSTQQEIFANHLIHSTFA--DRVFFTNSGAESVECAIK---TARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGK 144 (392)
Q Consensus 70 ~~~~~~~~~la~~L~~~~~~--~~v~f~~SGseA~e~Aik---lar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~ 144 (392)
+-.||.+..|...|.+.... ++++-..||=-|-++-++ +-+ .|..--..||+=+.=|-|.--.--.+
T Consensus 45 RSGNPTR~~Le~~~AkL~~aPq~~al~~sSGMaAL~~~~~Glv~L~-----~GdnhtP~i~AgdDlYGG~~RLL~~~--- 116 (415)
T TIGR01329 45 RSGNPTRTALESLLAKLEKAPQERALAVSSGMAALDVITRGLVLLN-----AGDNHTPEIIAGDDLYGGTDRLLTQL--- 116 (415)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHEEEEEE-----CCCCCCCEEEECCCCCCHHHHHHHHH---
T ss_conf 6898047899999886512753535888613679988641145660-----78886770784374565047899997---
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC--CEEEECCCC-
Q ss_conf 113479998643332221002688754101--233222233322221124621012322110223457--213101100-
Q gi|254780432|r 145 LQYLEGFGPKIEGFDQAKFCDLQSLKNQIS--NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDID--ALLIFDEVQ- 219 (392)
Q Consensus 145 ~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~--~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g--~llI~DEV~- 219 (392)
.+..+ -=+.+++-.|.|..++.+. +++..|++|.=- +-=....+ .+++.+.+++++ ++.++|-.+
T Consensus 117 ---~~~~G---~vv~~V~t~~~d~v~~~l~~~P~~~lv~LESPT-NPl~~ivD---I~~i~~~ah~~~~~~~V~vDNtmm 186 (415)
T TIGR01329 117 ---ASRSG---VVVVHVDTTDLDKVKAVLGDLPKTKLVLLESPT-NPLIKIVD---IRKIAEAAHALNEDALVVVDNTMM 186 (415)
T ss_pred ---HHCCC---EEEEECCCCCHHHHHHHHHCCCHHEEEEECCCC-CCCCEEEC---HHHHHHHHHHCCCCCEEEEECCCC
T ss_conf ---43285---289974898879999986068712076503888-98624633---789999998508971899822204
Q ss_pred CCCCCCCCCCCCCCCCC--CCCEEE--CCCCCCCCC-CCCCCCCCC--CCCCCCCCCCCCCCC-CCCCCCHH---HHHHH
Q ss_conf 34444555310111245--453021--034444443-443210001--112222233223453-21111001---23345
Q gi|254780432|r 220 TGYGRTGKLFAYEWANV--KPDIMT--IAKGMGGGF-PIGACLATN--EVAACMNQGSHGSTY-GGNVLAMV---LGEKV 288 (392)
Q Consensus 220 tG~GRtG~~f~~e~~gi--~PDi~~--~gK~l~gG~-P~sav~~~~--~i~~~~~~~~~~~T~-~gnpl~~a---aa~a~ 288 (392)
+++ | +.=..+ =.||+. =-|=|.|=. -+++|+.-+ ++.+-+ .+...+|= +-.|..|. -+.+|
T Consensus 187 SPl-~------c~PL~LnPGaD~v~~SATKfL~GH~D~MaGvl~~k~e~~~~~~-yF~~Ns~G~gLaP~DswLLlRGikT 258 (415)
T TIGR01329 187 SPL-L------CNPLELNPGADIVYESATKFLAGHSDVMAGVLAVKSEEIAKKV-YFLINSTGAGLAPFDSWLLLRGIKT 258 (415)
T ss_pred CCC-C------CCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCHHHHHHE-EEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 766-7------8875667897578635342014640113355777371210001-1123366776651358999866888
Q ss_pred HHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE----------------------------CCCEEEEEEEEC--
Q ss_conf 54320122210112100002688999988679707550----------------------------464009998724--
Q gi|254780432|r 289 LNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEV----------------------------RGQGLLIGLKTV-- 338 (392)
Q Consensus 289 L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v----------------------------RG~Gl~~~ie~~-- 338 (392)
|-+ +=++=++|++.+..+|.+.. .++-.|+.....| +|-|..++||--
T Consensus 259 Lai-R~ekQq~NA~~iA~fL~nsC-GfkP~~~~v~~k~~Y~GL~PatsPqissl~~p~f~LH~S~~~GaGsVLSfeTGsv 336 (415)
T TIGR01329 259 LAI-RLEKQQENAVAIALFLENSC-GFKPTHSRVVSKVRYAGLKPATSPQISSLSHPDFKLHKSQAKGAGSVLSFETGSV 336 (415)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHCC-CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEEEECCCH
T ss_conf 888-79899999999999863216-8886688310477638889767754223689873125021168851775332777
Q ss_pred CCHHHHHHHHHH--CCEEEEE---------------------------CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 998999999996--8989962---------------------------68988995589868899999999999999998
Q gi|254780432|r 339 FSPALLAAKFRD--ECLLTAP---------------------------SSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 339 ~~~~~~~~~l~~--~Gll~~~---------------------------~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
.-.+.+++.+.= -+|-+.. .-...||++. --|||+++++=|.+|+.+
T Consensus 337 ~~S~~lV~a~Klsif~i~VSFGsvnSLisMPC~mSHASIdae~r~~R~lpeDLvRLs~----GIE~v~DL~~DL~~A~~~ 412 (415)
T TIGR01329 337 ALSKRLVEAAKLSIFKITVSFGSVNSLISMPCLMSHASIDAEVREERDLPEDLVRLSV----GIEDVEDLIKDLSAALVA 412 (415)
T ss_pred HHHHHHHHHHHHEEEEEEEEECCCHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEEEEC----CCCCHHHHHHHHHHHHHH
T ss_conf 8989987763000235788212111111355534456688431110478611234532----625668899999999985
No 351
>TIGR02534 mucon_cyclo muconate and chloromuconate cycloisomerases; InterPro: IPR013370 This family consists of muconate cycloisomerase (5.5.1.1 from EC) and chloromuconate cycloisomerase (5.5.1.7 from EC), enzymes that often overlap in specificity. It does not include more distantly related proteins such as mandelate racemase (5.1.2.2 from EC).; GO: 0018849 muconate cycloisomerase activity, 0018850 chloromuconate cycloisomerase activity, 0030145 manganese ion binding.
Probab=70.12 E-value=1.6 Score=23.89 Aligned_cols=96 Identities=21% Similarity=0.306 Sum_probs=64.8
Q ss_pred CCCCCCCCCCCCC----CCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC----CCCEEECCCCCCCC
Q ss_conf 2223332222112----462101232211022345721310110034444555310111245----45302103444444
Q gi|254780432|r 179 AILIEPIQGEGGV----RKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV----KPDIMTIAKGMGGG 250 (392)
Q Consensus 179 avi~Epv~g~~G~----~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi----~PDi~~~gK~l~gG 250 (392)
|+-.=|...++|+ .|.|.|=...|++|.++.++..++||+.+|= .+.|.| -.|++.+-=.=.||
T Consensus 204 A~~~~~~LadaGv~LIEQPtpae~~~~LarLt~r~~VpIMADE~v~gP--------~dAl~~a~~~aADVfAlK~~ksGG 275 (369)
T TIGR02534 204 ALKYLPQLADAGVELIEQPTPAEQREALARLTRRFNVPIMADESVTGP--------ADALEIAKASAADVFALKIAKSGG 275 (369)
T ss_pred HHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCH--------HHHHHHHHHHCCCEEEEEHHCCCC
T ss_conf 999988888507000048896204899999984338854304456882--------789999998259778740001441
Q ss_pred CCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCHHHHHH
Q ss_conf 3443210001112222---233223453211110012334
Q gi|254780432|r 251 FPIGACLATNEVAACM---NQGSHGSTYGGNVLAMVLGEK 287 (392)
Q Consensus 251 ~P~sav~~~~~i~~~~---~~~~~~~T~~gnpl~~aaa~a 287 (392)
+....+|.... .=..||.|.--=|++.+|...
T Consensus 276 -----L~~~~~~AAIA~AAGi~lyGgTmLEGpiGtiASah 310 (369)
T TIGR02534 276 -----LLESKKVAAIAKAAGIALYGGTMLEGPIGTIASAH 310 (369)
T ss_pred -----HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf -----57899999999764831016500310268999999
No 352
>TIGR02151 IPP_isom_2 isopentenyl-diphosphate delta-isomerase, type 2; InterPro: IPR011179 This group represents the bacterial and archaeal isopentenyl-diphosphate delta-isomerase (IPP isomerase). IPP isomerase catalyses the interconversion of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), and is a key enzyme in the biosynthesis of isoprenoids via the mevalonate pathway. The bacterial and archaeal IPP isomerase (type 2 enzyme) differs from that found in eukaryotes (type 1 enzyme), and requires NADPH, magnesium, and FMN for activity , .; GO: 0004452 isopentenyl-diphosphate delta-isomerase activity, 0010181 FMN binding, 0008299 isoprenoid biosynthetic process, 0005737 cytoplasm.
Probab=66.55 E-value=2.5 Score=22.58 Aligned_cols=75 Identities=29% Similarity=0.465 Sum_probs=51.8
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCC-------------------CCCCCCCCC-CCCC-CCCC-E
Q ss_conf 3322221124621012322110223457213101100344-------------------445553101-1124-5453-0
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGY-------------------GRTGKLFAY-EWAN-VKPD-I 240 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~-------------------GRtG~~f~~-e~~g-i~PD-i 240 (392)
|-+|-+ |.+-...+|+.+|.++|+.-++++|+=||=-|+ |+-|+=|+. |.+= -.-+ -
T Consensus 162 E~vqpE-GDr~F~~G~l~~i~~~~~~~~vPVIvKEvG~G~S~e~a~~L~~~Gv~aiDv~G~GGTswa~vE~~Rr~~~~~~ 240 (349)
T TIGR02151 162 ELVQPE-GDRNFSKGWLEKIAEICSAVSVPVIVKEVGFGISKEVAKLLADAGVKAIDVSGAGGTSWAAVENYRRAKESNQ 240 (349)
T ss_pred CCCCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCC
T ss_conf 255799-9701565389999999965289879982157998899999987890088707876755999998875157523
Q ss_pred EE--CCCCCCC-CCCCCCCCC
Q ss_conf 21--0344444-434432100
Q gi|254780432|r 241 MT--IAKGMGG-GFPIGACLA 258 (392)
Q Consensus 241 ~~--~gK~l~g-G~P~sav~~ 258 (392)
-. +|..+.+ |.|-.+.+.
T Consensus 241 ~~~r~a~~f~~WGipT~~sL~ 261 (349)
T TIGR02151 241 KYERLASAFSDWGIPTAASLL 261 (349)
T ss_pred HHHHHHHHHHHCCCCHHHHHH
T ss_conf 578887777414886689999
No 353
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase; InterPro: IPR013441 Tyrosine phenol-lyases (4.1.99.2 from EC) (beta-tyrosinase), are pyridoxal-phosphate enzymes which are closely related to tryptophanase (4.1.99.1 from EC) (see IPR013441 from INTERPRO). Both belong to the beta-eliminating lyase family.; GO: 0050371 tyrosine phenol-lyase activity.
Probab=65.31 E-value=3.9 Score=21.34 Aligned_cols=218 Identities=19% Similarity=0.254 Sum_probs=109.3
Q ss_pred HHHHHHHC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCC---C------C
Q ss_conf 68875410-123322223332222112462101232211022345721310110034444555310111---2------4
Q gi|254780432|r 166 LQSLKNQI-SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEW---A------N 235 (392)
Q Consensus 166 ~~~l~~~~-~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~---~------g 235 (392)
++.|.+.. +++|+-+.+----.-+|-.|.+-.-++.++++|++||+-+..|-..|= --.+|--|. | +
T Consensus 159 l~~lid~~Ga~~i~yi~~a~tvnlaGGqPvsman~r~v~~~~~~hGi~~~~datr~v---enayfike~e~~y~~~~~~~ 235 (450)
T TIGR02618 159 LQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANLREVRKLCEKHGIKVFYDATRCV---ENAYFIKEREEGYKDKSIKE 235 (450)
T ss_pred HHHHHHHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHH---HHHHHHHHHHHCCCCCHHHH
T ss_conf 999985404110243666667650588730278789999998646817762124556---65564431230001105899
Q ss_pred CCCCEEECCCCCC--C---CC-CCCCCCC-C-CCCCCCCCCC----CCCCCCCCC-CCCHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 5453021034444--4---43-4432100-0-1112222233----223453211-110012334554320122210112
Q gi|254780432|r 236 VKPDIMTIAKGMG--G---GF-PIGACLA-T-NEVAACMNQG----SHGSTYGGN-VLAMVLGEKVLNIIQSDGFLENVI 302 (392)
Q Consensus 236 i~PDi~~~gK~l~--g---G~-P~sav~~-~-~~i~~~~~~~----~~~~T~~gn-pl~~aaa~a~L~~l~~~~l~~~~~ 302 (392)
|.-.++.+.-|-+ | -+ -+|+.+. + +++.+..... .--.||+|- --.+-|....|....+.+++++--
T Consensus 236 i~~em~sy~dGCtmsGkkdClvniGGfl~~n~~~~~~~a~e~vv~~eGmP~yGGlaGrdmea~a~G~~e~~~~~yi~hr~ 315 (450)
T TIGR02618 236 ILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDDELFQKAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRV 315 (450)
T ss_pred HHHHHHHHHCCCCCCCCCCEEEECCCEEEECHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998764056512476411565052467522899862056489971667657654200899998889887679999999
Q ss_pred HHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEE-EE-------CCCHHHHHHH--------HHHCCEEEEECCC------
Q ss_conf 100002688999988679707550464009998-72-------4998999999--------9968989962689------
Q gi|254780432|r 303 NIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGL-KT-------VFSPALLAAK--------FRDECLLTAPSSD------ 360 (392)
Q Consensus 303 ~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~i-e~-------~~~~~~~~~~--------l~~~Gll~~~~~~------ 360 (392)
.--.+|.++|++.- -+++..|-|.-.++-- .| ..+...++.. ..++|++..+...
T Consensus 316 ~q~~yl~~~l~~aG---~Piv~P~GGhavflda~~f~~h~~q~~fPaq~laa~~y~~~Gvr~merGi~saGr~~~tG~~~ 392 (450)
T TIGR02618 316 KQVRYLGDKLKAAG---VPIVKPVGGHAVFLDARKFLPHIPQDQFPAQALAAAIYVESGVRSMERGIVSAGRNKKTGEHH 392 (450)
T ss_pred HHHHHHHHHHHHCC---CCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCEECCCCCCCCCCC
T ss_conf 99999999998559---824404774002444888863145333407889988877404111212301237775576545
Q ss_pred ----CEEEECCC-CCCCHHHHHHHHHHHHHHHHH
Q ss_conf ----88995589-868899999999999999998
Q gi|254780432|r 361 ----NVVRILPP-LTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 361 ----~~irl~Pp-l~it~~eid~~i~~l~~al~~ 389 (392)
+.+|+.-| -+.|..++|...+.+.+-..+
T Consensus 393 ~Pkle~vrltiPrrvyt~~h~d~va~~~~~l~~~ 426 (450)
T TIGR02618 393 RPKLELVRLTIPRRVYTYAHLDVVADSIIKLYKH 426 (450)
T ss_pred CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8842567652261234577888999999999840
No 354
>KOG3843 consensus
Probab=63.72 E-value=5.2 Score=20.53 Aligned_cols=222 Identities=15% Similarity=0.241 Sum_probs=98.9
Q ss_pred CCCCCCCCCC-CCCCC--CCHHHHHHHH---HCCCC-CCCCCCCCCCCCCCC-CCCCHHHHHHHHCCCCCCCCEEEECC-
Q ss_conf 3479998643-33222--1002688754---10123-322223332222112-46210123221102234572131011-
Q gi|254780432|r 147 YLEGFGPKIE-GFDQA--KFCDLQSLKN---QISND-TAAILIEPIQGEGGV-RKVPEEFLQQLRKICDDIDALLIFDE- 217 (392)
Q Consensus 147 ~~~~~~p~~~-~~~~~--~~~d~~~l~~---~~~~~-iAavi~Epv~g~~G~-~~~~~~~l~~l~~lc~~~g~llI~DE- 217 (392)
++.+|.|..- ++..- -.-|+++.+. +++++ |-|+- +...+ -|-+|+-++.+..+|..|+++-|+..
T Consensus 121 ~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~-----sttscfapr~pd~leaiaaica~~diphivnna 195 (432)
T KOG3843 121 IHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIH-----STTSCFAPRSPDNLEAIAAICAAHDIPHIVNNA 195 (432)
T ss_pred HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE-----ECCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCC
T ss_conf 862777456313456307777699999999974876289995-----055335789975199999998705862553232
Q ss_pred -----------CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC-C--CCCCCCCCC---CCCCCCCCCCCCC
Q ss_conf -----------0034444555310111245453021034444443443210-0--011122222---3322345321111
Q gi|254780432|r 218 -----------VQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACL-A--TNEVAACMN---QGSHGSTYGGNVL 280 (392)
Q Consensus 218 -----------V~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~-~--~~~i~~~~~---~~~~~~T~~gnpl 280 (392)
++.| .|+|+.=++- -.+-|..- .|+|+.+ . ++...+.+. |+.-+ ..|.
T Consensus 196 yglqsee~i~~iaa~-~~~grida~v--------qsldknf~--vpvggaiia~fk~n~iq~iak~ypgras----a~ps 260 (432)
T KOG3843 196 YGLQSEECIHKIAAA-AECGRIDAFV--------QSLDKNFM--VPVGGAIIAAFKDNFIQEIAKMYPGRAS----ASPS 260 (432)
T ss_pred CCCCHHHHHHHHHHH-HHHCCHHHHH--------HHHHHCCE--EECCHHHHHHHHHHHHHHHHHHCCCCCC----CCCC
T ss_conf 123549999999988-6505198999--------97502641--0034457668677799999986899666----6850
Q ss_pred CHHHHHHHHHHHHCC---CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE--EEEEEEECCC-H----HHHHHHHHH
Q ss_conf 001233455432012---22101121000026889999886797075504640--0999872499-8----999999996
Q gi|254780432|r 281 AMVLGEKVLNIIQSD---GFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG--LLIGLKTVFS-P----ALLAAKFRD 350 (392)
Q Consensus 281 ~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G--l~~~ie~~~~-~----~~~~~~l~~ 350 (392)
.--+-+|=.+-++ ++...-+++=-++++++.++++.+..++.++--.- +-+.+....+ . ..+-.-++.
T Consensus 261 --~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~n~is~amtl~ti~~~k~kavt~~gsilfa 338 (432)
T KOG3843 261 --LDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEAIGECLLETPENEISLAMTLKTIDEAKDKAVTLFGSILFA 338 (432)
T ss_pred --HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf --889999998221678888877999999999999999998613542289853535532513886776689998878875
Q ss_pred CCEE---EEECCC--------CE--------------EEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8989---962689--------88--------------9955898688999999999999999985
Q gi|254780432|r 351 ECLL---TAPSSD--------NV--------------VRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 351 ~Gll---~~~~~~--------~~--------------irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+|+- +.+.+. .. +-.+.+.-|++.|+|+++.+|+++++.+
T Consensus 339 k~isgarvv~~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~~ 403 (432)
T KOG3843 339 KGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAAF 403 (432)
T ss_pred CCCCCCEEEECCCCCEEEECEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 15667458653544002403277612335675752675577760771757999999999999999
No 355
>PRK02615 thiamine-phosphate pyrophosphorylase; Provisional
Probab=63.47 E-value=2.2 Score=22.98 Aligned_cols=35 Identities=23% Similarity=0.441 Sum_probs=22.5
Q ss_pred HHHHHHCCCCCCCCEEEECC---CCCCCCCCCCCCCCC
Q ss_conf 23221102234572131011---003444455531011
Q gi|254780432|r 198 FLQQLRKICDDIDALLIFDE---VQTGYGRTGKLFAYE 232 (392)
Q Consensus 198 ~l~~l~~lc~~~g~llI~DE---V~tG~GRtG~~f~~e 232 (392)
.-+.++++|++||++||+++ +.--.+--|--.|++
T Consensus 187 ~A~~l~~Lc~~y~a~fIINDrvDlAlav~ADGVHLGQ~ 224 (345)
T PRK02615 187 EAKQLKELCKRYGALFIVNDRVDIALAVDADGVHLGQE 224 (345)
T ss_pred HHHHHHHHHHHHCCEEEEECCHHHHHHCCCCEEEECCC
T ss_conf 99999999999599489819699999749987755888
No 356
>CHL00040 rbcL ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
Probab=63.29 E-value=5.4 Score=20.38 Aligned_cols=85 Identities=12% Similarity=0.214 Sum_probs=41.9
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCC-CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC---------
Q ss_conf 5531011124545302103444444-34-432100011122222332234532111100123345543201---------
Q gi|254780432|r 226 GKLFAYEWANVKPDIMTIAKGMGGG-FP-IGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQS--------- 294 (392)
Q Consensus 226 G~~f~~e~~gi~PDi~~~gK~l~gG-~P-~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--------- 294 (392)
|.+|.++|.++.|=+=+.|-|+..| +| +=-.++ .+++-....+.|| ||-+.+|+.++++.=.+
T Consensus 361 g~~f~qdw~~mk~v~PV~SGGihpg~vp~l~~~lG-~D~ilqaGGGi~G-----HPdG~aAGA~A~RqAiEA~vq~r~~g 434 (477)
T CHL00040 361 GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFG-DDSVLQFGGGTLG-----HPWGNAPGAVANRVALEACVQARNEG 434 (477)
T ss_pred CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHC-CCEEEECCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 54444642246772463589877405789999728-8579976976557-----99854777999999999999876405
Q ss_pred -------CCCCCHHHHHCCHHHHHHHHHH
Q ss_conf -------2221011210000268899998
Q gi|254780432|r 295 -------DGFLENVINIAKILFEGLTAIK 316 (392)
Q Consensus 295 -------~~l~~~~~~~g~~l~~~L~~l~ 316 (392)
+++++.+.+....|...|+.++
T Consensus 435 ~~~~~e~~~~l~eaak~~~eL~~Ale~W~ 463 (477)
T CHL00040 435 RDLAREGNEIIREAAKWSPELAAACEVWK 463 (477)
T ss_pred HHHHHHCHHHHHHHHHHCHHHHHHHHHHC
T ss_conf 13343157999999842989999999754
No 357
>pfam07505 Gp37_Gp68 Phage protein Gp37/Gp68. Homologues of phage proteins Gp37 and Gp68 are found in several bacteria.
Probab=63.06 E-value=12 Score=18.03 Aligned_cols=45 Identities=24% Similarity=0.457 Sum_probs=34.6
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 124621012322110223457213101100344445553101112454530210344444
Q gi|254780432|r 190 GVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGG 249 (392)
Q Consensus 190 G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~g 249 (392)
+.++..++|.+.||+.|.++|+.|-+- |.| . -.||++-.||.-+|
T Consensus 197 ~ARpm~~~Wvr~irdQC~~agvpFfFK--QwG-----~--------~~~~~~~~~kk~~G 241 (253)
T pfam07505 197 GARPMDPEWVRDIRDQCTAAGVPFFFK--QWG-----G--------HGKDLVGRGKKATG 241 (253)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCEEEE--ECC-----C--------CCCCCCCCCCCCCC
T ss_conf 987789799999999999809988998--579-----9--------98654434743445
No 358
>pfam02606 LpxK Tetraacyldisaccharide-1-P 4'-kinase. This family consists of tetraacyldisaccharide-1-P 4'-kinase also known as Lipid-A 4'-kinase or Lipid A biosynthesis protein LpxK, EC:2.7.1.130. This enzyme catalyses the reaction: ATP + 2,3-bis(3-hydroxytetradecanoyl)-D -glucosaminyl-(beta-D-1,6)-2,3-bis(3-hydroxytetradecanoyl)-D-glu cosam inyl beta-phosphate <= ADP + 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D- glucosaminyl-1,6-beta-D-glucosamine 1,4'-bisphosphate. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS). The family contains a P-loop motif at the N terminus.
Probab=62.88 E-value=13 Score=18.01 Aligned_cols=119 Identities=17% Similarity=0.292 Sum_probs=60.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 35655540356777665432001347860023435465654321234553211347999864333222100268875410
Q gi|254780432|r 94 FTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQI 173 (392)
Q Consensus 94 f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~ 173 (392)
.+.+||==+=..+.+++..... | .++.....+|-|.+-+..-++.+. ......|--.+.+..
T Consensus 43 it~GGtGKTP~v~~l~~~l~~~----g-~~~~ilSRGYg~~~~~~~~v~~~~-------------~~~~~GDEp~lla~~ 104 (318)
T pfam02606 43 ITVGGTGKTPLVIALAELLRAR----G-LRPGVLSRGYGGKSKGPVLVDPGS-------------SAAEVGDEPLLLARR 104 (318)
T ss_pred EEECCCCHHHHHHHHHHHHHHC----C-CCEEEECCCCCCCCCCCEEECCCC-------------CHHHCCCHHHHHHHH
T ss_conf 8458878589999999999976----9-944783267676578878971688-------------946739699999875
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC-EEEECCCCCCCCCCCCCCCCCCCCCCCCE--EEC--CCCCC
Q ss_conf 12332222333222211246210123221102234572-13101100344445553101112454530--210--34444
Q gi|254780432|r 174 SNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDA-LLIFDEVQTGYGRTGKLFAYEWANVKPDI--MTI--AKGMG 248 (392)
Q Consensus 174 ~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~-llI~DEV~tG~GRtG~~f~~e~~gi~PDi--~~~--gK~l~ 248 (392)
.. +-|++ .++-.++++.++++++. ++|+|+ |+||+.+.+|+ +++ .+++|
T Consensus 105 ~~--~~v~V------------~~~R~~a~~~l~~~~~~dviIlDD------------GfQh~~l~rDl~Ivl~d~~~~fg 158 (318)
T pfam02606 105 TP--VPVVV------------GPDRAAAARALLEAHGADVIILDD------------GFQHYRLARDLEIVVVDGARGFG 158 (318)
T ss_pred CC--CCEEE------------CCCHHHHHHHHHHHCCCCEEEECC------------CCCCCCCCCCEEEEEECCCCCCC
T ss_conf 69--85998------------052899999999848997999148------------66673001886899972887887
Q ss_pred CCC--CCCCC
Q ss_conf 443--44321
Q gi|254780432|r 249 GGF--PIGAC 256 (392)
Q Consensus 249 gG~--P~sav 256 (392)
+|+ |.|-.
T Consensus 159 ng~lLPaGpL 168 (318)
T pfam02606 159 NGRLLPAGPL 168 (318)
T ss_pred CCCCCCCCCC
T ss_conf 9977858135
No 359
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase; InterPro: IPR006233 Cystathionine beta-lyase (alternate name: beta-cystathionase) is one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys .; GO: 0004121 cystathionine beta-lyase activity, 0006520 amino acid metabolic process, 0005737 cytoplasm.
Probab=59.58 E-value=14 Score=17.64 Aligned_cols=177 Identities=16% Similarity=0.187 Sum_probs=100.8
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97314506875781899999865201013331235655540356777665432001347860023435465654321234
Q gi|254780432|r 61 SEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATIS 140 (392)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s 140 (392)
-++++|..+ ..+...+|...|++.-|.--+....||.-||..+| ||.- ++|- .++..+.+||=.-..+=.
T Consensus 44 ~~~ltYG~r--Gt~T~~ALq~a~~elEG~ag~~lyPsGlAAvT~~~-Lafv------kaGD-hvL~vdsaY~PTr~Fcd~ 113 (389)
T TIGR01324 44 KDKLTYGIR--GTLTTVALQDALAELEGAAGVILYPSGLAAVTNAL-LAFV------KAGD-HVLVVDSAYKPTRRFCDI 113 (389)
T ss_pred CCCEECCCC--CCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHH-HHHH------HCCC-EEEEECCCCCHHHHHHHH
T ss_conf 774101346--87538899999997247776076247557888999-9887------4388-379864646115899988
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHH----HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC--CCCCEEE
Q ss_conf 5532113479998643332221002----688754101233222233322221124621012322110223--4572131
Q gi|254780432|r 141 AGGKLQYLEGFGPKIEGFDQAKFCD----LQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICD--DIDALLI 214 (392)
Q Consensus 141 ~s~~~~~~~~~~p~~~~~~~~~~~d----~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~--~~g~llI 214 (392)
+ .+.++ .++.|.| -|.+-..+..+.=-++.|. .++.-+-+ ++ ...|.+.++ ..|++.+
T Consensus 114 v------Lkr~g------v~~~YYDP~igPe~ia~Li~pnTkv~flEa-P~S~TfE~-qD--IPaIakaA~kv~~g~~~m 177 (389)
T TIGR01324 114 V------LKRLG------VEVEYYDPKIGPEDIAALIKPNTKVVFLEA-PASLTFEV-QD--IPAIAKAARKVAAGVVVM 177 (389)
T ss_pred H------HHHHC------EEEEEECCCCCHHHHHHHCCCCCEEEEEEC-CCCCEECC-CC--HHHHHHHHHHCCCCEEEE
T ss_conf 7------53634------458872788688889874088844899837-87451035-88--468999986418982999
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC--CCCCCCCCCCCCCCCCC
Q ss_conf 011003444455531011124545302103444444--34432100011122222
Q gi|254780432|r 215 FDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGG--FPIGACLATNEVAACMN 267 (392)
Q Consensus 215 ~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG--~P~sav~~~~~i~~~~~ 267 (392)
+|-+ +-+|-+|=-=.-||.==|-..-|=++|= .=+|-|.++++-.+.+.
T Consensus 178 iDNT----WaagllFkpL~HgvdiSiqA~TKY~~GHSD~~~Gtv~an~~~w~qL~ 228 (389)
T TIGR01324 178 IDNT----WAAGLLFKPLEHGVDISIQAATKYLAGHSDVLLGTVAANEDAWEQLL 228 (389)
T ss_pred EECC----CCCHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 6363----02001023001786368750335575500245634775578998751
No 360
>PRK05437 isopentenyl pyrophosphate isomerase; Provisional
Probab=54.97 E-value=4.7 Score=20.80 Aligned_cols=40 Identities=28% Similarity=0.422 Sum_probs=31.3
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 332222112462101232211022345721310110034444
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
|-+|-+ |.+- -.+||..|.+++++.++++|+-||.+|+.+
T Consensus 161 El~qpE-GDr~-f~~~l~~I~~i~~~~~vPVIvKeVG~Gis~ 200 (351)
T PRK05437 161 ELVQPE-GDRD-FRGWLDRIAEIVSALPVPVIVKEVGFGISK 200 (351)
T ss_pred HHCCCC-CCCC-HHHHHHHHHHHHHHCCCCEEEEECCCCCCH
T ss_conf 402888-8977-889999999999867998898521578899
No 361
>TIGR01136 cysKM cysteine synthases; InterPro: IPR005856 This model discriminates cysteine synthases (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblance to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=54.74 E-value=17 Score=17.12 Aligned_cols=80 Identities=16% Similarity=0.196 Sum_probs=43.8
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHH--CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 9976464102267435787899999999999973--14506875781899999865201013331235655540356777
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEK--LWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIK 107 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~--~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aik 107 (392)
.|+.+|+-+||..= |.=||..+..- +..+++-..+.++. +++...|++-+ .++|.+.++.|++
T Consensus 61 ~G~~iiEaTSGNTG---------IaLAMvAAarGYkliL~MPetmS~ERr----~~l~ayGA~L~--LT~~~~GM~GAi~ 125 (315)
T TIGR01136 61 PGTTIIEATSGNTG---------IALAMVAAARGYKLILTMPETMSLERR----KLLKAYGAELI--LTPAEEGMKGAID 125 (315)
T ss_pred CCCEEEECCCCCHH---------HHHHHHHHHCCCCEEEECCCCHHHHHH----HHHHHCCCEEE--EECCCCCCHHHHH
T ss_conf 88889842778448---------999999986199189985887178999----99987096698--8373357577899
Q ss_pred HHHHHHHCCCCCCCCCCCC
Q ss_conf 6654320013478600234
Q gi|254780432|r 108 TARRYHYMAGKTNKFRIVT 126 (392)
Q Consensus 108 lar~~~~~~g~t~r~~ii~ 126 (392)
.|....... +++..++.
T Consensus 126 kA~el~~~~--p~~~~~l~ 142 (315)
T TIGR01136 126 KAEELAAET--PNKYVMLD 142 (315)
T ss_pred HHHHHHHHC--CCCEEECC
T ss_conf 999999858--89621033
No 362
>PRK07105 pyridoxamine kinase; Validated
Probab=53.45 E-value=9.6 Score=18.77 Aligned_cols=36 Identities=17% Similarity=0.526 Sum_probs=27.6
Q ss_pred CCCCCCCCCCCCCCCC--CCHHHHHHHHCCCCCCCCEE
Q ss_conf 2222333222211246--21012322110223457213
Q gi|254780432|r 178 AAILIEPIQGEGGVRK--VPEEFLQQLRKICDDIDALL 213 (392)
Q Consensus 178 Aavi~Epv~g~~G~~~--~~~~~l~~l~~lc~~~g~ll 213 (392)
.-++++||+|..|..- .++++...+|+||...+++.
T Consensus 105 ~~iVvDPVMgd~G~ly~~~~~~~v~~~r~Llp~AdiIT 142 (284)
T PRK07105 105 LLVVVDPVMGDNGKLYQGFDQKMVEEMRKLIQKADVIT 142 (284)
T ss_pred CCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 84896965576887667787999999999844074627
No 363
>PRK00507 deoxyribose-phosphate aldolase; Provisional
Probab=53.31 E-value=18 Score=16.97 Aligned_cols=205 Identities=15% Similarity=0.200 Sum_probs=105.0
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHH
Q ss_conf 7646410226743578789999999999997314506875781899999865201013--33123565554035677766
Q gi|254780432|r 32 IPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFA--DRVFFTNSGAESVECAIKTA 109 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~v~f~~SGseA~e~Aikla 109 (392)
.+|||.+. .+-.....+|.+...++.+ +. ....--+|.+..+++++++..+. --|.-...|+...+.-+.-+
T Consensus 7 a~~ID~T~----L~~~~T~~~i~~lc~~A~~-~~-~aaVCV~P~~V~~a~~~L~~s~v~v~tVigFP~G~~~~~~K~~E~ 80 (221)
T PRK00507 7 AKYIDHTL----LKPEATEEDIDKLCEEAKE-YG-FASVCVNPSYVKLAAELLKGSDVKVCTVIGFPLGASTTAVKAFEA 80 (221)
T ss_pred HHHHCHHC----CCCCCCHHHHHHHHHHHHH-HC-CCEEEECHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHH
T ss_conf 86713406----9987999999999999998-79-948998989999999984489986557813699999576899999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 54320013478600234354656543212345532113479998643332221002688754101233222233322221
Q gi|254780432|r 110 RRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEG 189 (392)
Q Consensus 110 r~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~ 189 (392)
+. ....|...=..++-+ +-...+-...-..++.++.+...+.+--||+|.
T Consensus 81 ~~-ai~~GAdEiD~Vin~------------------------~~~~~g~~~~v~~ei~~v~~~~~~~~lKVIlEt----- 130 (221)
T PRK00507 81 KD-AIANGADEIDMVINI------------------------GALKSGDWDAVEADIRAVVEAAGGKVLKVIIET----- 130 (221)
T ss_pred HH-HHHCCCCEEEEECCH------------------------HHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-----
T ss_conf 99-998599877740259------------------------999758488999999999987276736999744-----
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC-CEEECCCCCCC--CC-CCCCCCCCCCCCCC
Q ss_conf 1246210123221102234572131011003444455531011124545-30210344444--43-44321000111222
Q gi|254780432|r 190 GVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKP-DIMTIAKGMGG--GF-PIGACLATNEVAAC 265 (392)
Q Consensus 190 G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~P-Di~~~gK~l~g--G~-P~sav~~~~~i~~~ 265 (392)
|. ++++-+..+.++|-+.|+-+|= +-|||+..| .+| |+-.|-+.+++ |+ +-|++=.-++..+.
T Consensus 131 ~~--Lt~~ei~~a~~~~~~aGadfvK--TSTGf~~~g---------at~e~v~~m~~~~~~~~giKasGGIrt~~~a~~~ 197 (221)
T PRK00507 131 CL--LTDEEKVKACEICKEAGADFVK--TSTGFSTGG---------ATVEDVKLMRETVGPRVGVKASGGIRTLEDALAM 197 (221)
T ss_pred CC--CCHHHHHHHHHHHHHHCCCEEE--ECCCCCCCC---------CCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHH
T ss_conf 65--9999999999999982978786--058878899---------8999999999972878638677898999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 223322345321111001233455432
Q gi|254780432|r 266 MNQGSHGSTYGGNVLAMVLGEKVLNII 292 (392)
Q Consensus 266 ~~~~~~~~T~~gnpl~~aaa~a~L~~l 292 (392)
+..+. +-++...+.+.++..
T Consensus 198 l~aGa-------~riGtS~~~~i~~e~ 217 (221)
T PRK00507 198 IEAGA-------TRLGTSAGVAILEQG 217 (221)
T ss_pred HHHCC-------HHCCCCCHHHHHHHH
T ss_conf 98275-------132167589999555
No 364
>cd03322 rpsA The starvation sensing protein RpsA from E.coli and its homologs are lactonizing enzymes whose putative targets are homoserine lactone (HSL)-derivative. They are part of the mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subfamily share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and catalytic residues, a partially conserved Lys-X-Lys motif and a conserved histidine-aspartate dyad.
Probab=52.66 E-value=2.3 Score=22.83 Aligned_cols=89 Identities=18% Similarity=0.172 Sum_probs=45.6
Q ss_pred CCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 210123221102234572131011003444455531011124-5453021034444443443210001112222233223
Q gi|254780432|r 194 VPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWAN-VKPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHG 272 (392)
Q Consensus 194 ~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~g-i~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~ 272 (392)
.|++=+..++++.++.++.+.+||...+....=.+......+ ++||+.-.| ||+...-++++.-...+ .-..|+
T Consensus 198 ~~~~d~~~~~~l~~~~~iPIa~gE~~~~~~~~~~~i~~~a~divq~d~~~~G-Git~~~kia~lA~~~gi----~~~~H~ 272 (361)
T cd03322 198 TPAENQEAFRLIRQHTATPLAVGEVFNSIWDWQNLIQERLIDYIRTTVSHAG-GITPARKIADLASLYGV----RTGWHG 272 (361)
T ss_pred CCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEC-CHHHHHHHHHHHHHCCC----CEEECC
T ss_conf 8865889999999746998882787689999999998276562055666048-79999999999998599----374047
Q ss_pred CCCCCCCCCHHHHHHH
Q ss_conf 4532111100123345
Q gi|254780432|r 273 STYGGNVLAMVLGEKV 288 (392)
Q Consensus 273 ~T~~gnpl~~aaa~a~ 288 (392)
.+.. .|++.+|++..
T Consensus 273 ~~~~-~~i~~aa~~H~ 287 (361)
T cd03322 273 PTDL-SPVGMAAALHL 287 (361)
T ss_pred CCCC-CHHHHHHHHHH
T ss_conf 8874-79999999999
No 365
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.46 E-value=19 Score=16.88 Aligned_cols=74 Identities=23% Similarity=0.260 Sum_probs=30.3
Q ss_pred CCCCCHHHH-HHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC--HHHHHHH---HHH
Q ss_conf 111100123-3455432012221011210000268899998867970755046400999872499--8999999---996
Q gi|254780432|r 277 GNVLAMVLG-EKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS--PALLAAK---FRD 350 (392)
Q Consensus 277 gnpl~~aaa-~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~--~~~~~~~---l~~ 350 (392)
++.++.-.| .-.+.++.++-++++-... +.+.+.|+++.. -.|-.|.-++|-.+.+ -+.+.+. +..
T Consensus 161 a~S~a~~iAk~~gVp~~~rdvfLD~e~~~-~~V~kql~~~~~-------~Ark~G~ai~IGh~~~~Tv~vl~~~~~~l~~ 232 (250)
T COG2861 161 ANSLAGKIAKEIGVPVIKRDVFLDDEDTE-AAVLKQLDAAEK-------LARKNGSAIGIGHPHKNTVAVLQQWLDELPA 232 (250)
T ss_pred CCCHHHHHHHHCCCCEEEEEEEECCCCCH-HHHHHHHHHHHH-------HHHHCCCEEEECCCCHHHHHHHHHHHHHCCC
T ss_conf 02020666763387523401330486789-999999999999-------9986694378548866399999998875787
Q ss_pred CCEEEEEC
Q ss_conf 89899626
Q gi|254780432|r 351 ECLLTAPS 358 (392)
Q Consensus 351 ~Gll~~~~ 358 (392)
+|+-+.+.
T Consensus 233 ~gIelV~~ 240 (250)
T COG2861 233 RGIELVPV 240 (250)
T ss_pred CCEEEECH
T ss_conf 87488427
No 366
>PRK04208 rbcL ribulose bisophosphate carboxylase; Reviewed
Probab=51.84 E-value=15 Score=17.52 Aligned_cols=86 Identities=17% Similarity=0.322 Sum_probs=43.7
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCC-CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH----HHCC----
Q ss_conf 5531011124545302103444444-34-432100011122222332234532111100123345543----2012----
Q gi|254780432|r 226 GKLFAYEWANVKPDIMTIAKGMGGG-FP-IGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNI----IQSD---- 295 (392)
Q Consensus 226 G~~f~~e~~gi~PDi~~~gK~l~gG-~P-~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~----l~~~---- 295 (392)
|-+|-+.|.+++|=+-+.|-|+..| +| +=-.++ .+++-....+.|+ ||-+.+|+.++++. ..+-
T Consensus 353 g~~~~q~w~~~k~~~PV~SgG~hpg~vp~~~~~~G-~D~il~aGGGi~G-----HP~G~aAGa~A~RqA~EA~~~g~~~g 426 (467)
T PRK04208 353 GIFFDQDWGSIKGVFPVASGGIHPGHMPALLDIFG-DDVVLQFGGGTLG-----HPWGNAAGATANRVALEACVEARNEG 426 (467)
T ss_pred CCHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHC-CCEEEECCCCCCC-----CCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 41002740036765131478877024679999718-8079966974147-----99860778999999999999565634
Q ss_pred --------CCCCHHHHHCCHHHHHHHHHHH
Q ss_conf --------2210112100002688999988
Q gi|254780432|r 296 --------GFLENVINIAKILFEGLTAIKN 317 (392)
Q Consensus 296 --------~l~~~~~~~g~~l~~~L~~l~~ 317 (392)
++++...+....|+..|+.+++
T Consensus 427 ~~~~~~g~~~l~e~Ak~h~EL~~ALe~w~~ 456 (467)
T PRK04208 427 RDIEKEGPDILDEAAKWSPELKAALETWKE 456 (467)
T ss_pred CCCCCCCHHHHHHHHHCCHHHHHHHHHHHC
T ss_conf 321000318999998539999999998620
No 367
>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes. In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl t
Probab=49.94 E-value=20 Score=16.74 Aligned_cols=25 Identities=28% Similarity=0.581 Sum_probs=18.8
Q ss_pred HHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 2110223457213101100344445553101
Q gi|254780432|r 201 QLRKICDDIDALLIFDEVQTGYGRTGKLFAY 231 (392)
Q Consensus 201 ~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~ 231 (392)
.+..+|++||+-+. ||.||| ||++-
T Consensus 329 mld~IA~~~G~~~~--ETltGF----Kwig~ 353 (548)
T cd03085 329 ALDRVAKKLGIPLF--ETPTGW----KFFGN 353 (548)
T ss_pred HHHHHHHHCCCCEE--ECCCCE----EEEEE
T ss_conf 99999998199459--848730----66300
No 368
>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1. This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.
Probab=48.55 E-value=21 Score=16.56 Aligned_cols=50 Identities=20% Similarity=0.219 Sum_probs=32.4
Q ss_pred HHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 998652010133--3123565554035677766543200134786002343546565432
Q gi|254780432|r 79 FANHLIHSTFAD--RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTL 136 (392)
Q Consensus 79 la~~L~~~~~~~--~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~ 136 (392)
+..++.+..+.| -+++|.||.-+..+|-.|.. .|=+.+....++|.|+.-
T Consensus 53 f~~~l~~~~~~d~~ivv~C~sG~RS~~Aa~~L~~--------~Gf~nV~ni~gGfeG~~~ 104 (117)
T cd01522 53 FLAELEEKVGKDRPVLLLCRSGNRSIAAAEAAAQ--------AGFTNVYNVLEGFEGDLD 104 (117)
T ss_pred HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH--------CCCCCEEEECCCCCCCCC
T ss_conf 7899997459998699988998159999999998--------598777981898035887
No 369
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458; InterPro: IPR006355 These sequences are all members of the IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. .
Probab=47.91 E-value=12 Score=18.11 Aligned_cols=50 Identities=36% Similarity=0.506 Sum_probs=38.0
Q ss_pred CCCHH-HHHHHHCC-CCCCCCEEEECCCC--------CCC----CCCCCCCCC--CCCCCCCCEEE
Q ss_conf 62101-23221102-23457213101100--------344----445553101--11245453021
Q gi|254780432|r 193 KVPEE-FLQQLRKI-CDDIDALLIFDEVQ--------TGY----GRTGKLFAY--EWANVKPDIMT 242 (392)
Q Consensus 193 ~~~~~-~l~~l~~l-c~~~g~llI~DEV~--------tG~----GRtG~~f~~--e~~gi~PDi~~ 242 (392)
-|++. |.++|+.+ |+-+.++||=|++. ||+ =|||||=++ |+..++||+.|
T Consensus 180 KPs~~fF~~al~a~G~epeeaVMiGDD~~~DVGGAQ~cGMrg~~VrTGK~RpSDeek~~v~pdlt~ 245 (258)
T TIGR01458 180 KPSKEFFKEALRALGVEPEEAVMIGDDLVDDVGGAQACGMRGVQVRTGKYRPSDEEKIEVKPDLTV 245 (258)
T ss_pred CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEE
T ss_conf 888589988866258881026886473454664032014123554227747876668654876102
No 370
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=47.11 E-value=22 Score=16.35 Aligned_cols=187 Identities=18% Similarity=0.203 Sum_probs=97.1
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC-CCCEEEC--CCCCC--CCCCCCCC
Q ss_conf 3332222112462101232211022345721310110034444555310111245-4530210--34444--44344321
Q gi|254780432|r 182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV-KPDIMTI--AKGMG--GGFPIGAC 256 (392)
Q Consensus 182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi-~PDi~~~--gK~l~--gG~P~sav 256 (392)
=|++. |+..|..++ +.+..+.++|+|=+-.=++| ..++ +=|++.. =|.|| +|+ +.+
T Consensus 145 NeTi~---Gv~~p~~~~------~~~~~~~llv~D~SS~i~s~--------~iD~sk~dviyagaQKnlG~~aGl--~vv 205 (381)
T PRK03080 145 NGTTS---GVRVPNADW------IGADREGLTICDATSAAFAL--------PLDWAKLDVYTFSWQKVLGGEGGH--GML 205 (381)
T ss_pred CCCEE---EEECCCCCC------CCCCCCCCEEEECHHHHCCC--------CCCHHHCCEEEEEECCCCCCCCCE--EEE
T ss_conf 56401---087467677------88888862787432444367--------678557427998700025787742--799
Q ss_pred CCCCCCCCCCC---C-------------------CCCCCCCCCCC-CCHHHHHHHHHHHHCCC----CCCHHHHHCCHHH
Q ss_conf 00011122222---3-------------------32234532111-10012334554320122----2101121000026
Q gi|254780432|r 257 LATNEVAACMN---Q-------------------GSHGSTYGGNV-LAMVLGEKVLNIIQSDG----FLENVINIAKILF 309 (392)
Q Consensus 257 ~~~~~i~~~~~---~-------------------~~~~~T~~gnp-l~~aaa~a~L~~l~~~~----l~~~~~~~g~~l~ 309 (392)
+.+.+..+... + ...++|++-.| ++...+..+|+-+++.+ +.++.+++.+.|.
T Consensus 206 I~sp~al~r~~~~~~~r~iP~~l~~~~~~~a~e~~~~~s~~NTPp~f~iy~~~~~l~Wl~~~GGl~~~~~rn~~ka~lLY 285 (381)
T PRK03080 206 ILSPRAVERLESYAPAWPLPKIFRLTKGGKLIENIFKGQTINTPSMLTVEDYLDQLDWAKSIGGLDALIARTAANSSVLY 285 (381)
T ss_pred EECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 97699998886138877884464245578887646534648996189999999999999972889999999999999999
Q ss_pred HHHHHHHHHCC---CEEEEECCCEEE-EEEEECCC---HHHHH-----HHHHHCCEEEE--EC-CCCEEEECCCCCCCHH
Q ss_conf 88999988679---707550464009-99872499---89999-----99996898996--26-8988995589868899
Q gi|254780432|r 310 EGLTAIKNRFP---NMFLEVRGQGLL-IGLKTVFS---PALLA-----AKFRDECLLTA--PS-SDNVVRILPPLTITAE 374 (392)
Q Consensus 310 ~~L~~l~~~~~---~~v~~vRG~Gl~-~~ie~~~~---~~~~~-----~~l~~~Gll~~--~~-~~~~irl~Ppl~it~~ 374 (392)
+-+ ++.+ ..+.+..-+-.| ..|.+..+ .+.+. ..++++|++-. +. +.+.+|..-==+++.+
T Consensus 286 ~~i----d~s~~~~~~v~d~~~RS~~nv~f~~~d~~~~~~~~~~~~~~~l~~e~g~~di~ghR~~~~GlR~s~y~av~~~ 361 (381)
T PRK03080 286 DWA----EKTPWATPLAADPATRSNTSVCLDFVDPADAQAAFDKALVAKLLRENGAVDIGPYRDAPNGLRIWCGATVEPS 361 (381)
T ss_pred HHH----HCCCCCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCEEEEECCCCCHH
T ss_conf 999----7088743366884452376489994580554799999999999982987456553568985588832778999
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999852
Q gi|254780432|r 375 EIHEGLERIERTAIKLS 391 (392)
Q Consensus 375 eid~~i~~l~~al~~L~ 391 (392)
+++.++.-++=++.++.
T Consensus 362 dv~aL~~~ld~~~~~~~ 378 (381)
T PRK03080 362 DVEALTPWLDWAFERLK 378 (381)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999999999986
No 371
>cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase.
Probab=46.77 E-value=2.9 Score=22.13 Aligned_cols=67 Identities=12% Similarity=0.066 Sum_probs=37.1
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCEEECC
Q ss_conf 7541012332222333222211246210123221102234572131011003444455531011124-545302103
Q gi|254780432|r 169 LKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWAN-VKPDIMTIA 244 (392)
Q Consensus 169 l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~g-i~PDi~~~g 244 (392)
+.+.+.+---..+=||+ |++-+..+++++++.++.+..||-..+...--.+...+..+ ++||+.-+|
T Consensus 113 ~~~~l~~~~l~wiEeP~---------~~~d~~~~~~l~~~~~ipIa~gE~~~~~~~~~~~i~~~a~di~~~d~~~~G 180 (229)
T cd00308 113 LIRALEKYGLAWIEEPC---------APDDLEGYAALRRRTGIPIAADESVTTVDDALEALELGAVDILQIKPTRVG 180 (229)
T ss_pred HHHHHHHCCCCEEECCC---------CCCCHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99985213983764677---------662758999996136998637876789999999999742210445766316
No 372
>pfam04298 Zn_peptidase_2 Putative neutral zinc metallopeptidase. Zinc metallopeptidase zinc binding regions have been predicted in some family members by a pattern match (Prosite:PS00142).
Probab=46.70 E-value=9.1 Score=18.92 Aligned_cols=69 Identities=19% Similarity=0.335 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCC-----CC
Q ss_conf 189999986520101333123565554035677766543200134786002343-546565432123455321-----13
Q gi|254780432|r 74 TQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTF-EGAFHGRTLATISAGGKL-----QY 147 (392)
Q Consensus 74 ~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~-~~~yHG~t~~a~s~s~~~-----~~ 147 (392)
-.-.++|++|++..+.+-|.......+ +.-+| -.++|.+.+ +..|||+++.++++...+ ++
T Consensus 37 ~TG~e~Ar~iL~~~gl~dV~Ve~~~G~-------LtDHY------DP~~k~vrLS~~~y~~~SlaAiaVAAHEvGHAiQh 103 (222)
T pfam04298 37 MTGAEVARRILDDNGLYDVRVESVPGQ-------LTDHY------DPRNKVVRLSEDVYNGRSVAAIGVAAHEVGHAIQH 103 (222)
T ss_pred CCHHHHHHHHHHHCCCCCEEEEEECCC-------CCCCC------CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 899999999999879998279985898-------78887------99878588150114798899999999998389885
Q ss_pred CCCCCCCC
Q ss_conf 47999864
Q gi|254780432|r 148 LEGFGPKI 155 (392)
Q Consensus 148 ~~~~~p~~ 155 (392)
.++|.|..
T Consensus 104 a~~Y~pL~ 111 (222)
T pfam04298 104 AEGYAPLV 111 (222)
T ss_pred HHCCHHHH
T ss_conf 62475899
No 373
>PRK00313 lpxK tetraacyldisaccharide 4'-kinase; Provisional
Probab=46.33 E-value=14 Score=17.68 Aligned_cols=119 Identities=17% Similarity=0.242 Sum_probs=57.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 35655540356777665432001347860023435465654321-23455321134799986433322210026887541
Q gi|254780432|r 94 FTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLA-TISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQ 172 (392)
Q Consensus 94 f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~-a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~ 172 (392)
.+.+||==+=..+.+|+.... .| .++-..+.+|-|++.. .+.++.+. ......|.--+...
T Consensus 59 itvGGTGKTP~v~~La~~L~~----~G-~~~~IiSRGYg~~~~~~~~~v~~~~-------------~~~~vGDEpllla~ 120 (332)
T PRK00313 59 ITVGGTGKTPLILWLIEHCRR----RG-LRVGVVSRGYGARPPQLPWRVTADQ-------------DAAEAGDEPLLIVQ 120 (332)
T ss_pred EEECCCCHHHHHHHHHHHHHH----CC-CCEEEEECCCCCCCCCCCEEECCCC-------------CHHHCCCHHHHHHH
T ss_conf 735887777999999999997----79-9658986465676667735545776-------------84555858899985
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC-EEEECCCCCCCCCCCCCCCCCCCCCCCCE--EEC--CCCC
Q ss_conf 012332222333222211246210123221102234572-13101100344445553101112454530--210--3444
Q gi|254780432|r 173 ISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDA-LLIFDEVQTGYGRTGKLFAYEWANVKPDI--MTI--AKGM 247 (392)
Q Consensus 173 ~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~-llI~DEV~tG~GRtG~~f~~e~~gi~PDi--~~~--gK~l 247 (392)
.. + +.|++ .++=.++++.+..+++. ++|+|+ |+||+.+.+|+ +++ .+++
T Consensus 121 ~~-~-~pV~V------------~~~R~~a~~~l~~~~~~dviIlDD------------GfQh~~l~rDl~Ivvid~~~~f 174 (332)
T PRK00313 121 RT-G-VPLMI------------DPDRPRAVQALLAAEPLDLILSDD------------GLQHYRLARDLELVLIDAARGL 174 (332)
T ss_pred CC-C-CCEEE------------CCCHHHHHHHHHHCCCCCEEEECC------------CCCCHHHCCCCEEEEECCCCCC
T ss_conf 06-9-62998------------076999999999649998899558------------5312010488069984566788
Q ss_pred CCCC--CCCCC
Q ss_conf 4443--44321
Q gi|254780432|r 248 GGGF--PIGAC 256 (392)
Q Consensus 248 ~gG~--P~sav 256 (392)
|||+ |.|-.
T Consensus 175 GNg~lLPaGpL 185 (332)
T PRK00313 175 GNGRCLPAGPL 185 (332)
T ss_pred CCCCCCCCCCC
T ss_conf 89888778645
No 374
>TIGR01394 TypA_BipA GTP-binding protein TypA; InterPro: IPR006298 This bacterial (and Arabidopsis) protein, termed TypA or BipA, is a GTP-binding protein. It is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown.; GO: 0005525 GTP binding, 0005622 intracellular.
Probab=45.68 E-value=24 Score=16.21 Aligned_cols=121 Identities=18% Similarity=0.271 Sum_probs=56.8
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHH
Q ss_conf 245453021034444443443210001-1122222332234532111100123345543201222101121000026889
Q gi|254780432|r 234 ANVKPDIMTIAKGMGGGFPIGACLATN-EVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGL 312 (392)
Q Consensus 234 ~gi~PDi~~~gK~l~gG~P~sav~~~~-~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L 312 (392)
-|..=+++|..+|-| ++-+- +=+..|.|+....=..|.-++...+.++-=-| -|++++|..|..-
T Consensus 459 IGfr~~FlT~TrG~G-------imn~~F~~Y~P~~pG~i~~R~~GsLVs~~~G~a~~YaL------~nLqeRG~~Fv~p- 524 (609)
T TIGR01394 459 IGFRTEFLTDTRGTG-------IMNHVFDEYEPWKPGEIETRRNGSLVSMEDGTATAYAL------WNLQERGRLFVSP- 524 (609)
T ss_pred HHHHHHHHHHHHHHH-------HHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHH------HHHHHCCCEEECC-
T ss_conf 122024544102131-------12012102578887687775141589926881066768------7387538433078-
Q ss_pred HHHHHHCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHCCEE-EEEC-CCCEEEECCCCCCCHHHHHHHH
Q ss_conf 999886797075504640099987249989999999968989-9626-8988995589868899999999
Q gi|254780432|r 313 TAIKNRFPNMFLEVRGQGLLIGLKTVFSPALLAAKFRDECLL-TAPS-SDNVVRILPPLTITAEEIHEGL 380 (392)
Q Consensus 313 ~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll-~~~~-~~~~irl~Ppl~it~~eid~~i 380 (392)
+ .+| -.|+.+|. ...+...-..=|+.+-|- ++.+ .+..++|.||..+|=|+.-+.+
T Consensus 525 --------G--~~V-Y~GMIiGE-hsR~~DL~VN~~K~K~LTN~RsSg~D~~~~L~pP~~lsLE~AlEyI 582 (609)
T TIGR01394 525 --------G--TEV-YEGMIIGE-HSRENDLDVNVCKAKKLTNVRSSGKDEAVKLTPPRKLSLEQALEYI 582 (609)
T ss_pred --------C--CCE-ECCEEEEE-CCCCCCCEECCCCCCCCCEEEECCCCCEEEECCCCCCCHHHHHHHH
T ss_conf --------8--626-33478872-3886666027516764210340377741686588555777999861
No 375
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=45.63 E-value=21 Score=16.54 Aligned_cols=27 Identities=4% Similarity=-0.028 Sum_probs=14.9
Q ss_pred CCCHHHHHHHHCCCCCCCCEEEECCCC
Q ss_conf 621012322110223457213101100
Q gi|254780432|r 193 KVPEEFLQQLRKICDDIDALLIFDEVQ 219 (392)
Q Consensus 193 ~~~~~~l~~l~~lc~~~g~llI~DEV~ 219 (392)
.|++..+..+.+.++++++-.|+-|-|
T Consensus 189 eps~~~l~~l~~~ik~~~v~~If~e~q 215 (264)
T cd01020 189 EPSPADIAAFQNAIKNRQIDALIVNPQ 215 (264)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 999999999999999869999998289
No 376
>PRK05409 hypothetical protein; Provisional
Probab=45.35 E-value=7.5 Score=19.48 Aligned_cols=32 Identities=19% Similarity=0.460 Sum_probs=19.7
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 22112462101232211022345721310110
Q gi|254780432|r 187 GEGGVRKVPEEFLQQLRKICDDIDALLIFDEV 218 (392)
Q Consensus 187 g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV 218 (392)
+-||.-+++++||++|+++|++++..++-|-.
T Consensus 67 SlGs~~~ld~~~L~~l~~l~~~~~~~~~SeHL 98 (283)
T PRK05409 67 SLGGAAPLDKDHLKRLKALADRYQPALVSEHL 98 (283)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHCCCCEECCE
T ss_conf 14788989999999999999985863110413
No 377
>PRK03512 thiamine-phosphate pyrophosphorylase; Provisional
Probab=44.70 E-value=7.2 Score=19.58 Aligned_cols=47 Identities=13% Similarity=0.139 Sum_probs=27.3
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH---HHHHHCCCCCCCCEEEECC
Q ss_conf 2688754101233222233322221124621012---3221102234572131011
Q gi|254780432|r 165 DLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEF---LQQLRKICDDIDALLIFDE 217 (392)
Q Consensus 165 d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~---l~~l~~lc~~~g~llI~DE 217 (392)
+++.+++.+..-+-.| |=..= .....++ .+.++++|++||++||++.
T Consensus 21 ~~~~ve~al~gGv~~v-----QlR~K-~~~~~e~~~~a~~~~~l~~~~~v~lIIND 70 (211)
T PRK03512 21 SVQWIERLLDAGVRTL-----QLRIK-DRRDEEVEADVVAAIALGRRYNARLFIND 70 (211)
T ss_pred CHHHHHHHHHCCCCEE-----EEECC-CCCHHHHHHHHHHHHHHHHHHCCEEEEEC
T ss_conf 6999999998799999-----98179-99999999999999999998098599978
No 378
>pfam05114 DUF692 Protein of unknown function (DUF692). This family consists of several uncharacterized bacterial proteins.
Probab=44.14 E-value=8.4 Score=19.14 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=25.7
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 222112462101232211022345721310110
Q gi|254780432|r 186 QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV 218 (392)
Q Consensus 186 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV 218 (392)
++-||.-+++++||++|++++++++..++-|-.
T Consensus 63 LSlGs~~~ld~~~L~~l~~l~~~~~~~~~SeHL 95 (275)
T pfam05114 63 LSLGGAAPLDAELLRALKELAERHDPPLVSEHL 95 (275)
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCEECCCE
T ss_conf 025899987999999999999975877361632
No 379
>TIGR02423 protocat_alph protocatechuate 3,4-dioxygenase, alpha subunit; InterPro: IPR012786 Protocatechuate (3,4-dihydroxybenzene, PCA) is an aromatic compound which is a key intermediate in the degradation of the plant biopolymer lignin and other aromatic compounds. The key step of PCA degradation is the ring-cleavage performed by dioxygenases adding both atoms from molecular oxygen to specific carbon atoms within the ring. This step can be performed by two distinct mechanisms; intradiol cleavage and extradiol cleavage. In intradiol cleavage the oxygen atoms are added to the carbons carrying the hydroxyl groups, producing two carboxylate groups. In extradiol cleavage the oxygens are added to one carbon carrying a hydroxyl group and another carrying a hydrogen, resulting in the formation of a carboxylate group and an aldehydic group. For further information see . PCA dioxygenases fall into the broader category of catechol dioxygenases. These are metalloenzymes which bind non-haeme iron. The extradiol dioxygenases use Fe(II) to activate oxygen for nucleophilic attack on the aromatic substrate, while the intradiol dioxygenases use Fe(III) to activate the aromatic substrate for an electrophilic attack by oxygen . This entry represents the alpha subunit of protocatechuate 3,4-dioxygenase, an enzyme which cleaves the PCA ring by an intradiol mechanism. It is composed of two subunits, alpha and beta (IPR012785 from INTERPRO) which are highly similar in structure and are thought to share a common ancestor , , . The core of each subunit is two four-stranded beta-sheets that fold upon each other to form a beta sandwhich. The active site cavity contains the Fe(III)-binding site and is located between the two subunits. All Fe(III) ligands are contributed by the beta subunit.; GO: 0005506 iron ion binding, 0018578 protocatechuate 34-dioxygenase activity, 0019439 aromatic compound catabolic process.
Probab=43.50 E-value=12 Score=18.06 Aligned_cols=64 Identities=28% Similarity=0.312 Sum_probs=37.3
Q ss_pred CCCCCCCCCCCCC-CCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC-CCCCCCCC---CC----CC--------
Q ss_conf 3222233322221-12462101232211022345721310110034444555-31011124---54----53--------
Q gi|254780432|r 177 TAAILIEPIQGEG-GVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGK-LFAYEWAN---VK----PD-------- 239 (392)
Q Consensus 177 iAavi~Epv~g~~-G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~-~f~~e~~g---i~----PD-------- 239 (392)
|+=.++|-=|..+ |.+.-+. +..+...=.|...+|||||++ =++.-.|. |+ |+
T Consensus 56 v~DAllE~WQADa~G~f~~~~----------d~r~~~~a~~~~F~G~GR~~tGd~~~G~~~F~TvKPG~vp~~dG~~~AP 125 (203)
T TIGR02423 56 VPDALLEIWQADAAGRFNSPA----------DPRRAAEATDPSFRGFGRVGTGDDESGEFTFETVKPGAVPDRDGKLQAP 125 (203)
T ss_pred ECCEEEEEECCCCCCCCCCCC----------CCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCC
T ss_conf 055478985468886647767----------7666666787557710331156189541788843388534525763178
Q ss_pred ---EEECCCCCCCC
Q ss_conf ---02103444444
Q gi|254780432|r 240 ---IMTIAKGMGGG 250 (392)
Q Consensus 240 ---i~~~gK~l~gG 250 (392)
+.+|+|||.-+
T Consensus 126 Hi~v~vFaRG~l~~ 139 (203)
T TIGR02423 126 HINVSVFARGLLRR 139 (203)
T ss_pred CEEEEEEEEECCCC
T ss_conf 03775541001132
No 380
>pfam05690 ThiG Thiazole biosynthesis protein ThiG. This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway.
Probab=43.02 E-value=12 Score=18.23 Aligned_cols=152 Identities=20% Similarity=0.181 Sum_probs=67.3
Q ss_pred CCCCHHHHHHHHHHHHH-CCCCC-CCCCCHHHHHHHHHHHHHCCCCC--CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 87899999999999973-14506-87578189999986520101333--1235655540356777665432001347860
Q gi|254780432|r 47 GHSHPELVAILKSQSEK-LWHVS-NLYQSTQQEIFANHLIHSTFADR--VFFTNSGAESVECAIKTARRYHYMAGKTNKF 122 (392)
Q Consensus 47 Gh~~p~i~~a~~~q~~~-~~~~~-~~~~~~~~~~la~~L~~~~~~~~--v~f~~SGseA~e~Aiklar~~~~~~g~t~r~ 122 (392)
.|.++++.+...++... +..+. ....... .-.+.+.+....++ ++.-.+|.-..+-|+|+||.- +..+.+.
T Consensus 17 ky~s~~~~~~ai~aSg~eivTVAlRR~~~~~--~~~~~~l~~i~~~~~~iLPNTAGc~tA~EAVr~A~la-RE~~~t~-- 91 (246)
T pfam05690 17 KYPSPEVLKEAIRASGAEIVTVALRRVNAGQ--PGGENFLDLLDWLGITLLPNTAGCRTAEEAVRTARLA-REAFGTN-- 91 (246)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEEEEEECCCC--CCCCHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHH-HHHCCCC--
T ss_conf 9999999999999968977998986305888--8842588864133866777630118899999999999-9970997--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--C-------CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC----CCCCC
Q ss_conf 02343546565432123455321134799--9-------86433322210026887541012332222333----22221
Q gi|254780432|r 123 RIVTFEGAFHGRTLATISAGGKLQYLEGF--G-------PKIEGFDQAKFCDLQSLKNQISNDTAAILIEP----IQGEG 189 (392)
Q Consensus 123 ~ii~~~~~yHG~t~~a~s~s~~~~~~~~~--~-------p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Ep----v~g~~ 189 (392)
.|-+ -+-+++.+..+- + ...++|.-.||...|-....-=+++.|..+.| |=+.-
T Consensus 92 -wIKL------------EVi~D~~~LlPD~~etl~Aae~Lv~eGF~VlpY~~~D~v~akrLed~Gc~avMPlgsPIGSg~ 158 (246)
T pfam05690 92 -WIKL------------EVIGDSKTLLPDPIETLKAAEILVKEGFTVLPYTTDDPVLARRLEEAGCAAVMPLGAPIGSGL 158 (246)
T ss_pred -EEEE------------EEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCC
T ss_conf -4899------------982698877988789999999999789989886179989999998759849862244013688
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 12462101232211022345721310110034444
Q gi|254780432|r 190 GVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 190 G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
|.. .+..++. ++.+.++.+|+| .|.|+
T Consensus 159 Gl~--n~~~l~~---i~e~~~vPvIVD---AGiG~ 185 (246)
T pfam05690 159 GLR--NPENLRI---IIEEADVPVIVD---AGIGT 185 (246)
T ss_pred CCC--CHHHHHH---HHHHCCCCEEEE---CCCCC
T ss_conf 868--9999999---999679988984---89896
No 381
>TIGR00551 nadB L-aspartate oxidase; InterPro: IPR005288 L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbour-joining trees.; GO: 0008734 L-aspartate oxidase activity, 0009435 NAD biosynthetic process, 0005737 cytoplasm.
Probab=42.84 E-value=14 Score=17.76 Aligned_cols=16 Identities=25% Similarity=0.266 Sum_probs=10.0
Q ss_pred HCCCCCCHHHHHHHHH
Q ss_conf 3578789999999999
Q gi|254780432|r 44 NSLGHSHPELVAILKS 59 (392)
Q Consensus 44 ~~lGh~~p~i~~a~~~ 59 (392)
+.-|+|++++++-+..
T Consensus 70 AGaG~cD~~aV~~v~~ 85 (546)
T TIGR00551 70 AGAGLCDEEAVEFVVS 85 (546)
T ss_pred HCCCCCCHHHHHHHHH
T ss_conf 4467886889999985
No 382
>PRK06512 thiamine-phosphate pyrophosphorylase; Provisional
Probab=42.69 E-value=7.9 Score=19.32 Aligned_cols=51 Identities=10% Similarity=0.203 Sum_probs=32.5
Q ss_pred HHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEE-CCCC
Q ss_conf 688754101-23322223332222112462101232211022345721310-1100
Q gi|254780432|r 166 LQSLKNQIS-NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIF-DEVQ 219 (392)
Q Consensus 166 ~~~l~~~~~-~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~-DEV~ 219 (392)
.+.++..+. .+|++|.+---..+... -...-+.|+++|++||+.||+ |-+.
T Consensus 29 ~~~l~~aL~~g~Va~vqlR~k~~d~~~---~~~~a~~L~~lc~~~gv~lIIND~~d 81 (221)
T PRK06512 29 AKLLRAALSGGDVASVILPDYGLDEAT---FQKQAEKYVPVIQEAGAAALIAGDTR 81 (221)
T ss_pred HHHHHHHHCCCCEEEEEEECCCCCHHH---HHHHHHHHHHHHHHCCCCEEECCCHH
T ss_conf 999999984698559997579999999---99999999999998299199889799
No 383
>cd02811 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 (IDI-2) FMN-binding domain. Two types of IDIs have been characterized at present. The long known IDI-1 is only dependent on divalent metals for activity, whereas IDI-2 requires a metal, FMN and NADPH. IDI-2 catalyzes the interconversion of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) in the mevalonate pathway.
Probab=41.85 E-value=12 Score=18.23 Aligned_cols=39 Identities=26% Similarity=0.418 Sum_probs=30.0
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC
Q ss_conf 33222211246210123221102234572131011003444
Q gi|254780432|r 183 EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG 223 (392)
Q Consensus 183 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G 223 (392)
|.+|-+ |.+ --.+||+.++++++..++++|+-||.+|+.
T Consensus 153 E~~~pe-GDr-~f~~~~~~I~~l~~~~~vPVIvKeVG~Gis 191 (326)
T cd02811 153 EAVQPE-GDR-DFRGWLERIEELVKALSVPVIVKEVGFGIS 191 (326)
T ss_pred HCCCCC-CCC-CHHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 400789-898-777899999999984799858852478999
No 384
>PRK09490 metH B12-dependent methionine synthase; Provisional
Probab=41.64 E-value=27 Score=15.81 Aligned_cols=27 Identities=26% Similarity=0.503 Sum_probs=16.1
Q ss_pred HHHHHHHHCCCCCCCCEEEE---CCCCCCCCCC
Q ss_conf 01232211022345721310---1100344445
Q gi|254780432|r 196 EEFLQQLRKICDDIDALLIF---DEVQTGYGRT 225 (392)
Q Consensus 196 ~~~l~~l~~lc~~~g~llI~---DEV~tG~GRt 225 (392)
..|++.+ .+||+||+.+|+ ||- |..+|
T Consensus 468 e~~~~~~-~l~kkYGAavV~L~~DE~--G~a~t 497 (1229)
T PRK09490 468 EKFIHHA-RLVRRYGAAVVVMAFDEQ--GQADT 497 (1229)
T ss_pred HHHHHHH-HHHHHHCCEEEEEECCCC--CCCCC
T ss_conf 8799987-999972974899840677--78878
No 385
>TIGR02902 spore_lonB ATP-dependent protease LonB; InterPro: IPR014251 This entry represents LonB, a paralog of the ATP-dependent protease La (LonA, IPR004815 from INTERPRO). LonB proteins are unassigned peptidases belonging to the MEROPS peptidase family S16 (lon protease family, clan SJ) and are found strictly, and almost universally, in endospore-forming bacteria. This protease was shown, in Bacillus subtilis, to be expressed specifically in the forespore during sporulation, under control of sigmaF . The lonB gene, despite being located immediately upstream of lonA, was shown to be monocistronic. LonB appears to be involved in the post-translation control of sigmaH, but lonB mutation did not produce an obvious sporulation defect under the conditions tested . Note that additional paralogs of LonA and LonB occur in the Clostridium lineage and these are excluded from this entry. .
Probab=41.41 E-value=14 Score=17.70 Aligned_cols=52 Identities=21% Similarity=0.458 Sum_probs=33.8
Q ss_pred CCCHHHHHHHHHCCC-----CCCCCCCCCC-CCCC-----CCCCCCHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 210026887541012-----3322223332-2221-----12462101232211022345721310110
Q gi|254780432|r 161 AKFCDLQSLKNQISN-----DTAAILIEPI-QGEG-----GVRKVPEEFLQQLRKICDDIDALLIFDEV 218 (392)
Q Consensus 161 ~~~~d~~~l~~~~~~-----~iAavi~Epv-~g~~-----G~~~~~~~~l~~l~~lc~~~g~llI~DEV 218 (392)
..|-++|+--..+++ -.=+=+-+|| ||.| |+-.| +-=+.+|.||-+|=+||+
T Consensus 122 A~FVEiDATT~RFDERGIADPLIGSVHDPIYQGAGplG~AGIPQP------K~GAVT~AHGGvLFIDEI 184 (532)
T TIGR02902 122 AAFVEIDATTARFDERGIADPLIGSVHDPIYQGAGPLGVAGIPQP------KPGAVTKAHGGVLFIDEI 184 (532)
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCEEEECCC
T ss_conf 668985051036021466665677615853337654578855758------777632025865512124
No 386
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=40.91 E-value=4.2 Score=21.09 Aligned_cols=57 Identities=16% Similarity=0.150 Sum_probs=33.4
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCEEECC
Q ss_conf 222333222211246210123221102234572131011003444455531011124-545302103
Q gi|254780432|r 179 AILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWAN-VKPDIMTIA 244 (392)
Q Consensus 179 avi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~g-i~PDi~~~g 244 (392)
.++=||+ |++-+..++++.++.++.+..||-..+....=.+......+ ++||+..+|
T Consensus 158 ~w~EeP~---------~~~d~~~~~~L~~~~~ipIa~gEs~~~~~~~~~~i~~~~~d~v~~d~~~~G 215 (265)
T cd03315 158 DYVEQPL---------PADDLEGRAALARATDTPIMADESAFTPHDAFRELALGAADAVNIKTAKTG 215 (265)
T ss_pred EEEECCC---------CCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCHHHEEECCCCCC
T ss_conf 4884789---------989999999998519999990898799999999998726134140877647
No 387
>TIGR03266 methan_mark_1 putative methanogenesis marker protein 1. Members of this protein family represent a distinct clade among the larger set of proteins that belong to families TIGR00702 and pfam02624. Proteins from this clade are found in genome sequence if and only if the species sequenced is one of the methanogens. All methanogens belong to the archaea; some but not all of those sequenced are hyperthermophiles. This protein family was detected by the method of partial phylogenetic profiling (see Haft, et al., 2006).
Probab=40.46 E-value=26 Score=15.92 Aligned_cols=12 Identities=17% Similarity=0.473 Sum_probs=7.9
Q ss_pred HHHHHHHHHCCE
Q ss_conf 999999996898
Q gi|254780432|r 342 ALLAAKFRDECL 353 (392)
Q Consensus 342 ~~~~~~l~~~Gl 353 (392)
..+.+.+.+.|+
T Consensus 326 ~~l~~~l~~~G~ 337 (376)
T TIGR03266 326 EIILEKLKEAGL 337 (376)
T ss_pred HHHHHHHHHCCC
T ss_conf 999999997699
No 388
>cd06061 PurM-like1 AIR synthase (PurM) related protein, subgroup 1 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain.
Probab=39.82 E-value=12 Score=18.17 Aligned_cols=45 Identities=9% Similarity=0.068 Sum_probs=29.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCC---C----HHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 123322223332222112462---1----01232211022345721310110
Q gi|254780432|r 174 SNDTAAILIEPIQGEGGVRKV---P----EEFLQQLRKICDDIDALLIFDEV 218 (392)
Q Consensus 174 ~~~iAavi~Epv~g~~G~~~~---~----~~~l~~l~~lc~~~g~llI~DEV 218 (392)
-.+++|.=.+|+.-...+..| + .++++++.+.|++||+.+|==++
T Consensus 68 ~sDI~amGa~P~~~l~~l~~p~~~~~~~l~~i~~Gi~~~~~~~g~~lvGGdT 119 (298)
T cd06061 68 ANDIATSGARPRWLLVTLLLPPGTDEEELKAIMREINEAAKELGVSIVGGHT 119 (298)
T ss_pred HHHHHHCCCEEHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCEECCEE
T ss_conf 9999985998288761211889999999999999999999983995644315
No 389
>PRK08176 pdxK pyridoxal kinase; Reviewed
Probab=39.72 E-value=14 Score=17.78 Aligned_cols=36 Identities=17% Similarity=0.286 Sum_probs=26.3
Q ss_pred CCCCCCCCCCCCCC-CCCCHHHHHHHHC-CCCCCCCEE
Q ss_conf 22223332222112-4621012322110-223457213
Q gi|254780432|r 178 AAILIEPIQGEGGV-RKVPEEFLQQLRK-ICDDIDALL 213 (392)
Q Consensus 178 Aavi~Epv~g~~G~-~~~~~~~l~~l~~-lc~~~g~ll 213 (392)
.-++++||+|..|- .-.+++.....|+ |+...+++.
T Consensus 120 ~~~vvDPVMGD~g~~lyv~~~~~~~~r~~Llp~AdiIT 157 (281)
T PRK08176 120 LLIMVDPVIGDIDSGIYVKPDLPEAYRQHLLPLAQGLT 157 (281)
T ss_pred CEEEECCEEECCCCCCCCCHHHHHHHHHHHHCCCCEEC
T ss_conf 76996727644999836787799999996013063973
No 390
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM; InterPro: IPR012696 This family consists of proteins from in the PhnM family. PhnM is a protein associated with phosphonate utilization in a number of bacterial species. Pseudomonas stutzeri WM88, has a related protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound), which is not contained in this entry..
Probab=39.46 E-value=16 Score=17.31 Aligned_cols=229 Identities=18% Similarity=0.189 Sum_probs=107.6
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC--CCCHHHHH---HHHHHHHHCC----CC--CCC---CCCC
Q ss_conf 764641022674357878999999999999731450687--57818999---9986520101----33--312---3565
Q gi|254780432|r 32 IPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNL--YQSTQQEI---FANHLIHSTF----AD--RVF---FTNS 97 (392)
Q Consensus 32 ~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~--~~~~~~~~---la~~L~~~~~----~~--~v~---f~~S 97 (392)
-+|||+-++ +==|=+++--++.+++. +.++ -..|.... +-++|+. +| +| .+. ...+
T Consensus 41 vefiD~~G~-------~llPGlidLHtD~~E~~--~~PRPgV~wp~~~A~~~~D~~l~~-~GITTVfdal~~~~~~~~~~ 110 (391)
T TIGR02318 41 VEFIDGEGD-------LLLPGLIDLHTDNLERH--MSPRPGVDWPIDAAVVEHDKQLAA-AGITTVFDALALGKASDTES 110 (391)
T ss_pred EEEEECCCC-------EECCCHHHHCCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHCCCCCCCCC
T ss_conf 247727887-------34774010103441010--277688725989999998899986-58135444341234211156
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCC---CCCC----CCCCHHHHHH
Q ss_conf 554035677766543200134786002343546565432123455321134799-9864---3332----2210026887
Q gi|254780432|r 98 GAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGF-GPKI---EGFD----QAKFCDLQSL 169 (392)
Q Consensus 98 GseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~-~p~~---~~~~----~~~~~d~~~l 169 (392)
|..--+.+-+++=.... +.....+..++=.|=|--.+..-. -+...+.. .|.. .-++ +-+|.+++.+
T Consensus 111 g~~~~~~~~~~idaI~~----~~~~gll~adH~lHlRcE~~~~~~-~~~~~~~~~~~~v~L~SlMDHtPGQrQ~~~~~~y 185 (391)
T TIGR02318 111 GGRRAENLRRMIDAIEE----ARDRGLLRADHRLHLRCELPNEEV-LPELEELIDDPRVDLISLMDHTPGQRQFRDLEKY 185 (391)
T ss_pred CCCCHHHHHHHHHHHHH----HHHCCCCEEEEEEEEEECCCCHHH-HHHHHHHHCCCCCEEEEEECCCCHHHCCHHHHHH
T ss_conf 65786679999999986----765687055200000000688768-9999997179970188860688701101125789
Q ss_pred HHHC--------CCCCCCCCCCC-CCCCCCCCCCC--HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 5410--------12332222333-22221124621--0123221102234572131011003444455531011124545
Q gi|254780432|r 170 KNQI--------SNDTAAILIEP-IQGEGGVRKVP--EEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKP 238 (392)
Q Consensus 170 ~~~~--------~~~iAavi~Ep-v~g~~G~~~~~--~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~P 238 (392)
.+.+ .++=+..++|- +.... .++ +.=++.|.++|+++++.|-- |.|=+|
T Consensus 186 r~~~~~k~grvlsd~~~~~~~~~r~~~~~---~~~~~~~~r~~i~ala~~~~i~lAS-----------------HDD~T~ 245 (391)
T TIGR02318 186 REYYQKKRGRVLSDDEFDEIVEERIARSA---EYADVEANRSEIAALARARGIPLAS-----------------HDDDTP 245 (391)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHC---CCCCHHHHHHHHHHHHHHCCCCEEC-----------------CCCCCH
T ss_conf 99872452674589999999999999735---8632589999999999857995324-----------------688888
Q ss_pred CEEECCCCCCC---CCCCCCCCCCCCC---CCCC--CC-CCCCCCCCCCCCCHHHHH-HHHHHHHCC
Q ss_conf 30210344444---4344321000111---2222--23-322345321111001233-455432012
Q gi|254780432|r 239 DIMTIAKGMGG---GFPIGACLATNEV---AACM--NQ-GSHGSTYGGNVLAMVLGE-KVLNIIQSD 295 (392)
Q Consensus 239 Di~~~gK~l~g---G~P~sav~~~~~i---~~~~--~~-~~~~~T~~gnpl~~aaa~-a~L~~l~~~ 295 (392)
--|--...+|- -||+..=+.++-- |..+ .| .-.|..|+||--+.-++. -.|++|-.+
T Consensus 246 e~V~e~~~~Gv~isEFPtT~EAA~~Ar~~G~~~lMGAPN~vRGgSHSGN~sA~ela~~GllDvL~SD 312 (391)
T TIGR02318 246 EHVAEAHDLGVTISEFPTTLEAAKEARSLGMQILMGAPNIVRGGSHSGNVSARELAQEGLLDVLASD 312 (391)
T ss_pred HHHHHHHHCCCEEEECHHHHHHHHHHHHCCCEEEEECCCCEECCCCCHHHHHHHHHHHCCCCEEECC
T ss_conf 8998887578267404234899999987698089608852017750268999999970873064012
No 391
>TIGR02082 metH methionine synthase; InterPro: IPR011822 Vitamin B12 dependent methionine synthase 2.1.1.13 from EC (5-methyltetrahydrofolate--homocysteine S-methyltransferase) catalyses the conversion of 5-methyltetrahydrofolate and L-homocysteine to tetrahydrofolate and L-methionine as the final step in de novo methionine biosynthesis. The enzyme requires methylcobalamin as a cofactor. In humans, defects in this enzyme are the cause of autosomal recessive inherited methylcobalamin deficiency (CBLG), which causes mental retardation, macrocytic anemia and homocystinuria. Mild deficiencies in activity may result in mild hyperhomocysteinemia, and mutations in the enzyme may be involved in tumorigenesis. Vitamin B12 dependent methionine synthase is found in prokaryotes and eukaryotes, but in prokaryotes the cofactor is cobalamin. This enzyme is a large protein composed of four structurally and functionally distinct modules: the first two modules bind homocysteine and tetrahydrofolate , the third module binds the B12 cofactor , and the C-terminal module (activation domain) binds S-adenosylmethionine. The activation domain is essential for the reductive activation of the enzyme. During the catalytic cycle, the highly reactive cob(I)alamin intermediate can be oxidised to produce an inactive cob(II)alamin enzyme; the enzyme is then reactivated via reductive methylation by the activation domain . The activation domain adopts an unusual alpha/beta fold.Recent studies suggest that this enzyme exists as an ensemble of conformations with equilibria dependent on the oxidation and methylation state of the cobalamin and on the concentrations of substrates or products .; GO: 0008705 methionine synthase activity, 0031419 cobalamin binding, 0050897 cobalt ion binding, 0009086 methionine biosynthetic process.
Probab=39.28 E-value=30 Score=15.57 Aligned_cols=30 Identities=27% Similarity=0.485 Sum_probs=17.6
Q ss_pred CCEEEECHHHHHHHC--CCCCCHHHHHHHHHH
Q ss_conf 976464102267435--787899999999999
Q gi|254780432|r 31 GIPFLDFASGIAVNS--LGHSHPELVAILKSQ 60 (392)
Q Consensus 31 G~~yiD~~~g~~~~~--lGh~~p~i~~a~~~q 60 (392)
|.+.-|+.+.+=-+| |=+.-|+|+++||+.
T Consensus 28 G~~~~d~~~~l~GnNd~L~~TkPdvi~~iHr~ 59 (1265)
T TIGR02082 28 GEEFADHARELKGNNDILNLTKPDVIATIHRA 59 (1265)
T ss_pred CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHH
T ss_conf 73126888776676003206843799999887
No 392
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=39.04 E-value=30 Score=15.55 Aligned_cols=169 Identities=11% Similarity=0.132 Sum_probs=89.6
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE--ECCCCCCC-CCCCCCCCCCCCCCCCCCCC-----------C
Q ss_conf 2234572131011003444455531011124545302--10344444-43443210001112222233-----------2
Q gi|254780432|r 205 ICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM--TIAKGMGG-GFPIGACLATNEVAACMNQG-----------S 270 (392)
Q Consensus 205 lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~--~~gK~l~g-G~P~sav~~~~~i~~~~~~~-----------~ 270 (392)
+.+..++++|+|=.-.=++| .+-+..+ |++ .--|.||- | +..|+.++++++...+. .
T Consensus 158 ~p~~~~~~lV~D~SS~~~s~---~iD~~~~----d~iYagaQKnlGpaG--~tvvIir~~ll~~~~~~~P~~l~y~~~~~ 228 (355)
T cd00611 158 VPDTGGVPLVADMSSNILSR---PIDVSKF----GVIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLNYKTHAD 228 (355)
T ss_pred CCCCCCCCEEEEECCHHCCC---CCCHHHC----CEEEEECCCCCCCCC--EEEEEECHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 66778962787502054086---7677892----189987100156665--08999849997102446973200999985
Q ss_pred CCCCCCCCCC-CHHHHHHHHHHHHCCC----CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEE-EEEECCC--HH
Q ss_conf 2345321111-0012334554320122----2101121000026889999886797075504640099-9872499--89
Q gi|254780432|r 271 HGSTYGGNVL-AMVLGEKVLNIIQSDG----FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLI-GLKTVFS--PA 342 (392)
Q Consensus 271 ~~~T~~gnpl-~~aaa~a~L~~l~~~~----l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~-~ie~~~~--~~ 342 (392)
..++|+-.|+ +.-.+..+++-|++.+ +.++.+++.+.|.+-+.+-..-++. +.+..-+=.|. .+.+..+ .+
T Consensus 229 ~~s~~NTPp~f~iy~~~lv~~Wl~~~GGl~~~~~~n~~kA~~LY~~iD~s~~~y~~-~v~~~~RS~mnv~f~~~~~~l~~ 307 (355)
T cd00611 229 NNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRG-PVDKRARSRMNVPFRLGKEELEK 307 (355)
T ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECC-CCCHHHCCCCEEEEEECCHHHHH
T ss_conf 25555796279999999999998876899999999999999999999858880117-89823358775899858878899
Q ss_pred HHHHHHHHCCEEEEEC----CCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 9999999689899626----898899558986889999999999999
Q gi|254780432|r 343 LLAAKFRDECLLTAPS----SDNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 343 ~~~~~l~~~Gll~~~~----~~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
.+.+.+.++|++-... |+=++-+.| .++.++++.+++.+++
T Consensus 308 ~Fl~~a~~~Gl~~lkGhRsvGg~RaS~yn--A~~~e~V~aL~~fm~~ 352 (355)
T cd00611 308 EFLKEAEAAGMIGLKGHRSVGGIRASIYN--ALSLEGVQALADFMKE 352 (355)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCEEEEEEC--CCCHHHHHHHHHHHHH
T ss_conf 99999998788255687522352788508--9899999999999999
No 393
>pfam09940 DUF2172 Domain of unknown function (DUF2172). This domain, found in various hypothetical prokaryotic proteins, has no known function. An aminopeptidase domain is conserved within the family, but its relevance has not been established yet.
Probab=38.59 E-value=14 Score=17.68 Aligned_cols=37 Identities=24% Similarity=0.455 Sum_probs=27.3
Q ss_pred CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHH
Q ss_conf 874898501037996799764641022674357878999
Q gi|254780432|r 14 SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPE 52 (392)
Q Consensus 14 ~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~ 52 (392)
-|..|. -+.+|++|.+|++++||-.. --+.+||+.|-
T Consensus 17 VP~eW~-v~~A~i~~~~g~~i~Df~~n-nLhvv~YS~p~ 53 (384)
T pfam09940 17 VPKEWN-VRDAYIINPNGEKVVDFADN-NLHLVGYSEPV 53 (384)
T ss_pred CCCCEE-EEEEEEECCCCCEEEECCCC-CEEEEECCCCE
T ss_conf 799716-84799997999889873687-33788646576
No 394
>PRK07564 phosphoglucomutase; Validated
Probab=38.48 E-value=27 Score=15.78 Aligned_cols=24 Identities=25% Similarity=0.551 Sum_probs=15.8
Q ss_pred HHHCCCCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf 211022345721310110034444555310
Q gi|254780432|r 201 QLRKICDDIDALLIFDEVQTGYGRTGKLFA 230 (392)
Q Consensus 201 ~l~~lc~~~g~llI~DEV~tG~GRtG~~f~ 230 (392)
.+.++|++||+-++ |+.||| ||++
T Consensus 353 lld~iA~~~G~~~~--et~tGF----K~I~ 376 (544)
T PRK07564 353 MIDRVAAKLGRKLY--EVPVGF----KWFV 376 (544)
T ss_pred HHHHHHHHCCCEEE--EECCCH----HHHH
T ss_conf 99999998498279--914628----9999
No 395
>pfam00883 Peptidase_M17 Cytosol aminopeptidase family, catalytic domain. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase.
Probab=38.46 E-value=16 Score=17.24 Aligned_cols=12 Identities=25% Similarity=0.326 Sum_probs=6.7
Q ss_pred CCCCCCEEEECC
Q ss_conf 234572131011
Q gi|254780432|r 206 CDDIDALLIFDE 217 (392)
Q Consensus 206 c~~~g~llI~DE 217 (392)
.+..|-|+.+|=
T Consensus 167 TDAEGRLvLADa 178 (312)
T pfam00883 167 TDAEGRLVLADA 178 (312)
T ss_pred CCCCCEEEEHHH
T ss_conf 986501454557
No 396
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=38.29 E-value=12 Score=18.16 Aligned_cols=51 Identities=14% Similarity=0.148 Sum_probs=24.2
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC-EEEECCCC
Q ss_conf 10026887541012332222333222211246210123221102234572-13101100
Q gi|254780432|r 162 KFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDA-LLIFDEVQ 219 (392)
Q Consensus 162 ~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~-llI~DEV~ 219 (392)
..+.+..+.+...-+-+.++.+|.+- .-+|..++.+..++.|+ .-|+|+|.
T Consensus 469 ~~~~~~~l~~~~~~kralIVTD~~~~-------~~G~vd~v~~~L~~~gi~~~vFd~V~ 520 (862)
T PRK13805 469 ERGSLPYLLDEPGKKRAFIVTDRGMV-------ELGYVDKVTDVLRANGVETEVFSEVE 520 (862)
T ss_pred CCCHHHHHHHCCCCCEEEEECCHHHH-------HCCCHHHHHHHHHHCCCEEEEECCCC
T ss_conf 67829999866899779998785187-------67889999999998698399966989
No 397
>cd03321 mandelate_racemase Mandelate racemase (MR) catalyzes the Mg2+-dependent 1,1-proton transfer reaction that interconverts the enantiomers of mandelic acid. MR is the first enzyme in the bacterial pathway that converts mandelic acid to benzoic acid and allows this pathway to utilize either enantiomer of mandelate. MR belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=38.16 E-value=9.5 Score=18.80 Aligned_cols=63 Identities=19% Similarity=0.189 Sum_probs=37.8
Q ss_pred CCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCEEECCCCCCCCCCCCCCC
Q ss_conf 210123221102234572131011003444455531011124-5453021034444443443210
Q gi|254780432|r 194 VPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWAN-VKPDIMTIAKGMGGGFPIGACL 257 (392)
Q Consensus 194 ~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~g-i~PDi~~~gK~l~gG~P~sav~ 257 (392)
.+++-+..++++.++.++.+.+||...+..-.=.+...+..+ ++||+..+| |++...-++++.
T Consensus 221 ~~~~d~~~~~~l~~~~~~pI~~~E~~~~~~~~~~~i~~~a~d~~~~d~~~~G-Git~~~kia~~A 284 (355)
T cd03321 221 TLQHDYEGHARIASALRTPVQMGENWLGPEEMFKALSAGACDLVMPDLMKIG-GVTGWLRASALA 284 (355)
T ss_pred CCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEC-CHHHHHHHHHHH
T ss_conf 9988999999998548999993788899999999998499961036745207-799999999999
No 398
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=37.89 E-value=31 Score=15.43 Aligned_cols=159 Identities=16% Similarity=0.133 Sum_probs=67.1
Q ss_pred CCCCHHHHHHHHHHHHH-CCCC-CCCCCCHHHHHHHHHHHHHCCCCCC--CCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 87899999999999973-1450-6875781899999865201013331--235655540356777665432001347860
Q gi|254780432|r 47 GHSHPELVAILKSQSEK-LWHV-SNLYQSTQQEIFANHLIHSTFADRV--FFTNSGAESVECAIKTARRYHYMAGKTNKF 122 (392)
Q Consensus 47 Gh~~p~i~~a~~~q~~~-~~~~-~~~~~~~~~~~la~~L~~~~~~~~v--~f~~SGseA~e~Aiklar~~~~~~g~t~r~ 122 (392)
.|..+++.+...++... +-.+ -.+...... .-.+.+.+....+++ +.-.+|.--.|-|+|.||.-. .
T Consensus 25 kY~s~~~~~~ai~aSgaeiVTVAlRR~~~~~~-~~~~~~l~~i~~~~~~~LPNTAGc~taeEAVr~A~lAR-E------- 95 (267)
T CHL00162 25 KYRNLEEAINSIEASGCEIVTVAIRRAQNNKL-NGNSSLLDGLDWNKLWLLPNTAGCQTAEEAIRVAFLGR-E------- 95 (267)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEEEECCCCCCC-CCHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHH-H-------
T ss_conf 99999999999999699879999732557788-87467874337024178566302287999999999999-9-------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--C-------CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC----CCCCC
Q ss_conf 02343546565432123455321134799--9-------86433322210026887541012332222333----22221
Q gi|254780432|r 123 RIVTFEGAFHGRTLATISAGGKLQYLEGF--G-------PKIEGFDQAKFCDLQSLKNQISNDTAAILIEP----IQGEG 189 (392)
Q Consensus 123 ~ii~~~~~yHG~t~~a~s~s~~~~~~~~~--~-------p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Ep----v~g~~ 189 (392)
+..--|.|... +--+-+-+++.+..+- + ...++|.-.||..-|-....-=+++.|..+.| |=+.-
T Consensus 96 -l~~~~g~~~tn-wIKLEVi~D~~tLlPD~~etl~Aae~Lv~eGF~VlpY~~dD~v~akrLe~~Gc~avMPlgsPIGSg~ 173 (267)
T CHL00162 96 -LAKQLGQEDNN-FVKLEVIPDPKYLLPDPIGTLKAAEFLVRKGFTVLPYINADPVLAKQLEDIGCATVMPLGSPIGSGQ 173 (267)
T ss_pred -HHHHCCCCCCC-EEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCC
T ss_conf -85301567897-7999982798777988789999999999789999895489989999998659868863455123688
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 12462101232211022345721310110034444
Q gi|254780432|r 190 GVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 190 G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
|.. .+..++-+ ..+.++.+|+| .|.|+
T Consensus 174 Gl~--n~~~l~~i---~e~~~vPvIVD---AGiG~ 200 (267)
T CHL00162 174 GLQ--NLLNLQII---IENAKIPVIID---AGIGT 200 (267)
T ss_pred CCC--CHHHHHHH---HHCCCCCEEEE---CCCCC
T ss_conf 758--99999999---96489988996---89896
No 399
>PRK00125 pyrF orotidine 5'-phosphate decarboxylase; Reviewed
Probab=37.84 E-value=31 Score=15.43 Aligned_cols=133 Identities=20% Similarity=0.265 Sum_probs=64.9
Q ss_pred HHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC--CCCCEEECCCCCCCC-C-CCCCCCCCCC--CCC-CC--CCC
Q ss_conf 3221102234572131011003444455531011124--545302103444444-3-4432100011--122-22--233
Q gi|254780432|r 199 LQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWAN--VKPDIMTIAKGMGGG-F-PIGACLATNE--VAA-CM--NQG 269 (392)
Q Consensus 199 l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~g--i~PDi~~~gK~l~gG-~-P~sav~~~~~--i~~-~~--~~~ 269 (392)
|+++-+..++.|++.|+|==.--.|-|-+.++-.+++ ..-|-+|+.-=||-. + |+=-..-+.. +.- .. +|+
T Consensus 74 Le~~i~~~~~~~~~vI~DaKRGDIGsT~~aYA~a~f~~~~~aDAvTvnPYmG~dsl~Pfl~~a~~~~kgvFvL~~TSNpg 153 (277)
T PRK00125 74 LERTIAYLREAGVLVIADAKRGDIGSTAEAYAKAWFESPLEADAVTVSPYMGFDSLEPYLEYAEEHGKGVFVLCRTSNPG 153 (277)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCC
T ss_conf 99999999876984999634347277999999998538577886896476683300899999985598599998269987
Q ss_pred C----CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH-HHHCCHHHHHHHHHHHHCCCEEEEECCCEE
Q ss_conf 2----2345321111001233455432012221011-210000268899998867970755046400
Q gi|254780432|r 270 S----HGSTYGGNVLAMVLGEKVLNIIQSDGFLENV-INIAKILFEGLTAIKNRFPNMFLEVRGQGL 331 (392)
Q Consensus 270 ~----~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~-~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl 331 (392)
+ .-.+-.|.|+.-.++..+-+...+..-..++ --.|...-+.++++.+..|+...=+.|.|.
T Consensus 154 s~d~Q~~~~~~g~~ly~~va~~~~~~~~~~~~~~~vG~VVGAT~p~~~~~ir~~~p~~~~LiPG~GA 220 (277)
T PRK00125 154 GSDLQFLDTADGRPLYQHVADLAADLNNAYLGYGSIGLVVGATFPPELAAVRKIVGDMPLLIPGIGA 220 (277)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 7877630257996799999999998625667777448999537647789999867997598256303
No 400
>pfam06970 RepA_N Replication initiator protein A (RepA) N-terminus. This of family of predicted proteins represents the N-terminus (approximately 80 residues) of replication initiator protein A (RepA), a DNA replication initiator in plasmids. Most proteins in this family are bacterial, but archaeal and eukaryotic members are also included.
Probab=37.11 E-value=26 Score=15.91 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=21.8
Q ss_pred EECCCCEEEECHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 967997646410226743578789999999999
Q gi|254780432|r 27 FSENGIPFLDFASGIAVNSLGHSHPELVAILKS 59 (392)
Q Consensus 27 ~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~ 59 (392)
.|.||+-|+=|...--+-.||-+.+.++++.++
T Consensus 43 iD~~g~vY~ift~~el~~~L~~s~~~v~k~~kE 75 (76)
T pfam06970 43 IDEEGNVYFIFTNEELMELLNCSKQKVIKIKKE 75 (76)
T ss_pred CCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHC
T ss_conf 979999999964999999978788899999961
No 401
>PRK06264 cbiC precorrin-8X methylmutase; Validated
Probab=36.45 E-value=19 Score=16.84 Aligned_cols=56 Identities=16% Similarity=0.347 Sum_probs=36.9
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCC---CCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 2454530210344444434432100---01112222233-223453211110012334554320122
Q gi|254780432|r 234 ANVKPDIMTIAKGMGGGFPIGACLA---TNEVAACMNQG-SHGSTYGGNVLAMVLGEKVLNIIQSDG 296 (392)
Q Consensus 234 ~gi~PDi~~~gK~l~gG~P~sav~~---~~~i~~~~~~~-~~~~T~~gnpl~~aaa~a~L~~l~~~~ 296 (392)
-++.|.+++ |+|+|.|-. ++.+++.--|. ..-++-+|+|++.|+-++-|+.-+++.
T Consensus 150 g~~~PaLVI-------G~PVGFVgA~ESKe~L~~~~iP~It~~GrkGGS~vAaAivNALl~la~~~~ 209 (210)
T PRK06264 150 EGITPKLVV-------GVPVGFVKAAESKEALRTTNIPSISTIGPKGGTPVAVAIINGIIALSKNER 209 (210)
T ss_pred CCCCCCEEE-------ECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 499974688-------568666677999999986899989971698759999999999999986365
No 402
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=35.06 E-value=13 Score=17.87 Aligned_cols=51 Identities=18% Similarity=0.340 Sum_probs=29.9
Q ss_pred HHHHHHHCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECC-CCC
Q ss_conf 68875410123322223-33222211246210123221102234572131011-003
Q gi|254780432|r 166 LQSLKNQISNDTAAILI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDE-VQT 220 (392)
Q Consensus 166 ~~~l~~~~~~~iAavi~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE-V~t 220 (392)
++.+++.+...+-++-+ |--... .--.+..++++++|++|++.||++. +.-
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~----~~~~~~a~~~~~lc~~~~v~liINd~~dl 76 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSD----EEYLALAEKLRALCQKYGVPLIINDRVDL 76 (211)
T ss_pred HHHHHHHHHCCCEEEEEECCCCCH----HHHHHHHHHHHHHHHHHCCEEEECCCHHH
T ss_conf 999999996799499980289874----99999999999999981980996683999
No 403
>cd02195 SelD Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes. The N-terminal domain of SelD is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, and FGAM synthase and is thought to bind ATP.
Probab=34.74 E-value=12 Score=18.20 Aligned_cols=74 Identities=23% Similarity=0.315 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCCCCCCCCCC------C----HHHHHHHHCCCCCCCCEEEECCCC-----------CCCCCCCCCCCCCC
Q ss_conf 23322223332222112462------1----012322110223457213101100-----------34444555310111
Q gi|254780432|r 175 NDTAAILIEPIQGEGGVRKV------P----EEFLQQLRKICDDIDALLIFDEVQ-----------TGYGRTGKLFAYEW 233 (392)
Q Consensus 175 ~~iAavi~Epv~g~~G~~~~------~----~~~l~~l~~lc~~~g~llI~DEV~-----------tG~GRtG~~f~~e~ 233 (392)
.|+++.=.+|+.-...+..| + .++++++++.|+++|+.+|==.+. +|....+++.. .
T Consensus 82 sDiaamGa~P~~~l~~l~lP~~~~~~~~~~l~~i~~Gi~~~~~~~gv~ivGGhT~~~~~~~i~~tv~G~~~~~~~i~--~ 159 (287)
T cd02195 82 SDIYAMGAKPLSALAIVTLPRKLPALQEEVLREILAGGKDKLREAGAVLVGGHTIEGPEPKYGLSVTGLVHPNKILR--N 159 (287)
T ss_pred HHHHHHCCCHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCEECCCCCEEEEEEEEEECCCCCEE--C
T ss_conf 46988458769999880277777511299999999999999998299577553320888668888998875776254--2
Q ss_pred CCCCC-CEEECCCCCCCC
Q ss_conf 24545-302103444444
Q gi|254780432|r 234 ANVKP-DIMTIAKGMGGG 250 (392)
Q Consensus 234 ~gi~P-Di~~~gK~l~gG 250 (392)
.+.+| |.+++.|.||.|
T Consensus 160 ~~ak~GD~IivTk~lG~g 177 (287)
T cd02195 160 SGAKPGDVLILTKPLGTG 177 (287)
T ss_pred CCCCCCCEEEEECCCCHH
T ss_conf 689999999995787589
No 404
>cd03327 MR_like_2 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 2. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.
Probab=34.32 E-value=10 Score=18.55 Aligned_cols=51 Identities=8% Similarity=0.062 Sum_probs=32.9
Q ss_pred CCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC-CCCEEECC
Q ss_conf 2101232211022345721310110034444555310111245-45302103
Q gi|254780432|r 194 VPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV-KPDIMTIA 244 (392)
Q Consensus 194 ~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi-~PDi~~~g 244 (392)
.+++=++.+++++++.++.+..||...+....-.+......++ +||+..+|
T Consensus 206 ~~~~d~~~~~~l~~~~~ipIa~gE~~~~~~~~~~~i~~~a~di~~~d~~~~G 257 (341)
T cd03327 206 LIPDDIEGYAELKKATGIPISTGEHEYTVYGFKRLLEGRAVDILQPDVNWVG 257 (341)
T ss_pred CCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCEEEECCCEEC
T ss_conf 9967899999987309998980988889999999998618897982435318
No 405
>KOG1528 consensus
Probab=33.85 E-value=36 Score=15.02 Aligned_cols=21 Identities=14% Similarity=0.006 Sum_probs=14.7
Q ss_pred CHHHHHHHHHHHHHHHHHHCC
Q ss_conf 899999999999999998529
Q gi|254780432|r 372 TAEEIHEGLERIERTAIKLSH 392 (392)
Q Consensus 372 t~~eid~~i~~l~~al~~L~~ 392 (392)
+..-.+++++.+.+++.+..+
T Consensus 331 ~~~L~~~il~av~~si~~~~~ 351 (351)
T KOG1528 331 TKKLHPKILEAVRESIEEENL 351 (351)
T ss_pred CHHHHHHHHHHHHHHHHHCCC
T ss_conf 545589999999976543059
No 406
>KOG0628 consensus
Probab=33.62 E-value=36 Score=14.99 Aligned_cols=216 Identities=16% Similarity=0.146 Sum_probs=115.8
Q ss_pred HHHHHHHCCCCCCC-----CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC-----C
Q ss_conf 68875410123322-----2233322221124621012322110223457213101100344445553101112-----4
Q gi|254780432|r 166 LQSLKNQISNDTAA-----ILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWA-----N 235 (392)
Q Consensus 166 ~~~l~~~~~~~iAa-----vi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~-----g 235 (392)
-+.|.+.+.+++|. +++-. .|..|. ..-+.+..|-.+|+++|+-|-+|--+.| ..|.++.+ |
T Consensus 219 ~~~L~~AIe~D~arGlIPf~v~at-~GTT~~--ca~D~l~elg~Vc~~~glWLHVDAAYAG-----sa~iCpE~r~l~rG 290 (511)
T KOG0628 219 GDTLRKAIEEDIARGLIPFFVCAT-LGTTSS--CAFDELEELGPVCREEGLWLHVDAAYAG-----SAFICPEFRYLMRG 290 (511)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEE-ECCCCC--CCCCCHHHHCCHHHHCCEEEEEEHHHCC-----CCCCCHHHHHHHHC
T ss_conf 799999999998679865799984-057655--5554187741035226878996345315-----43158878877502
Q ss_pred C-CCCEE--ECCCCCCCCCCCCCCCCCCC--CCCCC--CCCC--C-----CCCC--CCCCCCH----HHHHHHHHHHHCC
Q ss_conf 5-45302--10344444434432100011--12222--2332--2-----3453--2111100----1233455432012
Q gi|254780432|r 236 V-KPDIM--TIAKGMGGGFPIGACLATNE--VAACM--NQGS--H-----GSTY--GGNVLAM----VLGEKVLNIIQSD 295 (392)
Q Consensus 236 i-~PDi~--~~gK~l~gG~P~sav~~~~~--i~~~~--~~~~--~-----~~T~--~gnpl~~----aaa~a~L~~l~~~ 295 (392)
| ..|=. ...|.+---+-+|++..++. +...+ +|.. | ..-| =.=|++= .----+++.+--+
T Consensus 291 ie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve 370 (511)
T KOG0628 291 IEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVE 370 (511)
T ss_pred CHHHCCCCCCHHHEEEEEEEEECCEEECCCEEEEEEECCHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 23330335785260377653000345047604666503827644433236888210115200113267899999988688
Q ss_pred CCCCHHHHHCCHHHHHHHHHHHHCCCE-EEEECCCEEEEEEEECCC---HHHHHHHHHHCC-EEEEEC---CCCEEEECC
Q ss_conf 221011210000268899998867970-755046400999872499---899999999689-899626---898899558
Q gi|254780432|r 296 GFLENVINIAKILFEGLTAIKNRFPNM-FLEVRGQGLLIGLKTVFS---PALLAAKFRDEC-LLTAPS---SDNVVRILP 367 (392)
Q Consensus 296 ~l~~~~~~~g~~l~~~L~~l~~~~~~~-v~~vRG~Gl~~~ie~~~~---~~~~~~~l~~~G-ll~~~~---~~~~irl~P 367 (392)
+|.+++++-. .|.+.++++..+-+.+ +..-|-.||.. +-+..+ .+.+..++-..| |.+.++ +.=+|||.-
T Consensus 371 ~lq~~iR~h~-~La~~fe~lv~~d~~FE~~~~~~lgLvc-FRlk~~N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V 448 (511)
T KOG0628 371 NLQNYIREHV-RLAKEFETLVRADPRFEIVNKRILGLVC-FRLKGDNEINEALLNRLNSSGRIHLVPASLHGKFVLRFAV 448 (511)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHCCCCCEEECCCCCCEEE-EEECCCCHHHHHHHHHHHHCCCEEEEEEEECCEEEEEEEE
T ss_conf 9999999999-9999999986048741550221002157-7525874789999999973696899776314669999982
Q ss_pred C-CCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9-86889999999999999999852
Q gi|254780432|r 368 P-LTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 368 p-l~it~~eid~~i~~l~~al~~L~ 391 (392)
. -..++++++++.+.|.+...+|.
T Consensus 449 ~s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628 449 CSPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 4787857889999999999999987
No 407
>TIGR03247 glucar-dehydr glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (, GenProp0716). The E. coli enzyme has been well-characterized.
Probab=33.28 E-value=37 Score=14.96 Aligned_cols=37 Identities=5% Similarity=0.133 Sum_probs=24.1
Q ss_pred HHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2211022345721310110034444555310111245
Q gi|254780432|r 200 QQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV 236 (392)
Q Consensus 200 ~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi 236 (392)
+.+.++.++.++.+--.++.|.|--.+.-+..+.-+|
T Consensus 269 e~MAe~r~~t~iPlATNm~~t~~~~~~~ai~~~AVdI 305 (441)
T TIGR03247 269 EVMAEFRRATGLPTATNMIATDWRQMGHALQLQAVDI 305 (441)
T ss_pred HHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHCCCCE
T ss_conf 9999998538987302316505899789997088737
No 408
>KOG1270 consensus
Probab=32.28 E-value=14 Score=17.67 Aligned_cols=46 Identities=28% Similarity=0.341 Sum_probs=36.4
Q ss_pred CCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 62101232211022345721310110034444555310111-24545
Q gi|254780432|r 193 KVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEW-ANVKP 238 (392)
Q Consensus 193 ~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~-~gi~P 238 (392)
.-|.+|++.+.++.+-.|.++|.++..|+.-+.|+.|..|+ ..|.|
T Consensus 172 ~dp~~~l~~l~~~lkP~G~lfittinrt~lS~~~~i~~~E~vl~ivp 218 (282)
T KOG1270 172 KDPQEFLNCLSALLKPNGRLFITTINRTILSFAGTIFLAEIVLRIVP 218 (282)
T ss_pred HCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCHHHHHHHHCC
T ss_conf 47899999999984889825864112337776221129999886458
No 409
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).
Probab=32.11 E-value=14 Score=17.61 Aligned_cols=51 Identities=16% Similarity=0.209 Sum_probs=31.7
Q ss_pred CCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCEEECC
Q ss_conf 210123221102234572131011003444455531011124-545302103
Q gi|254780432|r 194 VPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWAN-VKPDIMTIA 244 (392)
Q Consensus 194 ~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~g-i~PDi~~~g 244 (392)
.+++=+..++++.++.++.+.+||...+....-.+......+ +.||+.-+|
T Consensus 224 ~~~~d~~~~~~l~~~~~~pI~~~Es~~~~~~~~~~i~~~a~di~~~d~~~~G 275 (357)
T cd03316 224 VPPDDLEGLARLRQATSVPIAAGENLYTRWEFRDLLEAGAVDIIQPDVTKVG 275 (357)
T ss_pred CCCCCHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 8955799999998628996881788788788888887077763762674469
No 410
>KOG0791 consensus
Probab=31.94 E-value=22 Score=16.41 Aligned_cols=11 Identities=9% Similarity=0.395 Sum_probs=7.9
Q ss_pred CCHHHHHHHHC
Q ss_conf 21012322110
Q gi|254780432|r 194 VPEEFLQQLRK 204 (392)
Q Consensus 194 ~~~~~l~~l~~ 204 (392)
-+++||+-+-+
T Consensus 177 t~~~fW~mvwq 187 (374)
T KOG0791 177 TRDDFWKMVWQ 187 (374)
T ss_pred CHHHHHHHHHH
T ss_conf 72678999887
No 411
>COG2156 KdpC K+-transporting ATPase, c chain [Inorganic ion transport and metabolism]
Probab=31.66 E-value=39 Score=14.79 Aligned_cols=20 Identities=35% Similarity=0.552 Sum_probs=14.1
Q ss_pred HHHCCCCCCHHHHHHHHHHH
Q ss_conf 74357878999999999999
Q gi|254780432|r 42 AVNSLGHSHPELVAILKSQS 61 (392)
Q Consensus 42 ~~~~lGh~~p~i~~a~~~q~ 61 (392)
+..|+|-+||++.+++++-.
T Consensus 85 ggSNl~psNp~L~~rv~~~~ 104 (190)
T COG2156 85 GGSNLGPSNPELLERVKARV 104 (190)
T ss_pred CCCCCCCCCHHHHHHHHHHH
T ss_conf 77678999999999999999
No 412
>pfam06418 CTP_synth_N CTP synthase N-terminus. This family consists of the N-terminal region of the CTP synthase protein (EC:6.3.4.2). This family is found in conjunction with pfam00117 located in the C-terminal region of the protein. CTP synthase catalyses the synthesis of CTP from UTP by amination of the pyrimidine ring at the 4-position.
Probab=31.59 E-value=39 Score=14.78 Aligned_cols=61 Identities=23% Similarity=0.403 Sum_probs=31.4
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHCCCCCC---CCEEEECCCCCCCCCCCCCC--CCC-------CCCCCCCEEE
Q ss_conf 223332222112462101232211022345---72131011003444455531--011-------1245453021
Q gi|254780432|r 180 ILIEPIQGEGGVRKVPEEFLQQLRKICDDI---DALLIFDEVQTGYGRTGKLF--AYE-------WANVKPDIMT 242 (392)
Q Consensus 180 vi~Epv~g~~G~~~~~~~~l~~l~~lc~~~---g~llI~DEV~tG~GRtG~~f--~~e-------~~gi~PDi~~ 242 (392)
+|+| |=|.-|++. +.-|++++|++..+. ++++|-=--..=.+-+|.+= -.| ..|++|||++
T Consensus 136 ~ivE-iGGTVGDIE-s~pFlEAiRQl~~~~g~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVkeLrs~GIqPDilv 208 (275)
T pfam06418 136 VIVE-IGGTVGDIE-SLPFLEAIRQFRLEVGRENVLFIHVTLVPYLKAAGELKTKPTQHSVKELRSIGIQPDILV 208 (275)
T ss_pred EEEE-CCCEEECCC-CCHHHHHHHHHHHHHCCCCEEEEEEEECCEECCCCCCCCCCHHHHHHHHHHCCCCCCEEE
T ss_conf 9997-576010010-228999999998872877569999873244368875456732888999996489987588
No 413
>cd07560 Peptidase_S41_CPP C-terminal processing peptidase; serine protease family S41. The C-terminal processing peptidase (CPP, EC 3.4.21.102) also known as tail-specific protease (tsp), the photosystem II D1 C-terminal processing protease (D1P), and other related S41 protease family members are present in this CD. CPP is synthesized as a precursor form with a carboxyl-terminal extension. It specifically recognizes a C-terminal tripeptide, Xaa-Yaa-Zaa, in which Xaa is preferably Ala or Leu, Yaa is preferably Ala or Tyr and Zaa is preferably Ala, but then cleaves at a variable distance from the C-terminus. The C-terminal carboxylate group is essential, and proteins where this group is amidated are not substrates. This family of proteases contains the PDZ domain that promotes protein-protein interactions and is important for substrate recognition. The active site consists of a serine/lysine catalytic dyad. The bacterial CCP-1 is believed to be important for the degradation of incorrectl
Probab=31.40 E-value=39 Score=14.76 Aligned_cols=143 Identities=17% Similarity=0.167 Sum_probs=68.3
Q ss_pred CCCHHHHHHHHHHHHH--CCCCCCCC--CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 5781899999865201--01333123--5655540356777665432001347860023435465654321234553211
Q gi|254780432|r 71 YQSTQQEIFANHLIHS--TFADRVFF--TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQ 146 (392)
Q Consensus 71 ~~~~~~~~la~~L~~~--~~~~~v~f--~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~ 146 (392)
|......++.+.|.+. .+.+...+ -+.+.--.+.|+++|..+ -.+..|+..++-- |... .
T Consensus 58 F~~~t~~~~~~al~~l~~~g~~glIlDLR~NpGG~l~~av~ia~~F------l~~g~iv~~~~r~-~~~~---------~ 121 (211)
T cd07560 58 FSENTAEELKKALKELKKQGMKGLILDLRNNPGGLLDEAVEIADLF------LPGGPIVSTKGRN-GKRE---------A 121 (211)
T ss_pred ECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH------CCCCCEEEEECCC-CCEE---------E
T ss_conf 5652199999999999976996799987899981599999999986------4997299998169-9579---------9
Q ss_pred CCCCCC--CCCCCCCCCCCHH---HHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCC
Q ss_conf 347999--8643332221002---68875410123-32222333222211246210123221102234572131011003
Q gi|254780432|r 147 YLEGFG--PKIEGFDQAKFCD---LQSLKNQISND-TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQT 220 (392)
Q Consensus 147 ~~~~~~--p~~~~~~~~~~~d---~~~l~~~~~~~-iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t 220 (392)
+..... ...|-+.-+.-+. -|-+...+.|. -|-+|-|.-.|.|-+ +.+..+-+...+-+-.-+-.|
T Consensus 122 ~~~~~~~~~~~PlvVLvN~~SASASEI~agALqd~~ra~lvG~~TfGKG~v--------Q~~~~l~dg~~lklT~a~y~t 193 (211)
T cd07560 122 YASDDGGLYDGPLVVLVNGGSASASEIVAGALQDNGRAVLVGERTFGKGSV--------QTVFPLSDGSALKLTTAKYYT 193 (211)
T ss_pred EECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEE--------EEEEECCCCCEEEEEEEEEEC
T ss_conf 816898667888899985775526678999898549789960530044488--------998984999989999789999
Q ss_pred CCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 4444555310111245453021
Q gi|254780432|r 221 GYGRTGKLFAYEWANVKPDIMT 242 (392)
Q Consensus 221 G~GRtG~~f~~e~~gi~PDi~~ 242 (392)
--|| ..+..||+||+.+
T Consensus 194 P~G~-----~i~~~GI~PDi~v 210 (211)
T cd07560 194 PSGR-----SIQKKGIEPDIEV 210 (211)
T ss_pred CCCC-----CCCCCCCCCCEEC
T ss_conf 9998-----7246786888748
No 414
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=31.28 E-value=35 Score=15.08 Aligned_cols=37 Identities=16% Similarity=0.235 Sum_probs=26.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 312356555403567776654320013478600234354656543
Q gi|254780432|r 91 RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRT 135 (392)
Q Consensus 91 ~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t 135 (392)
-+++|.+|.-+..+|-.|.+. |-+.|..++||+++|+
T Consensus 61 iv~~C~~G~rS~~aa~~L~~~--------G~~~V~~L~GGi~aW~ 97 (101)
T cd01528 61 IVVLCHHGGRSMQVAQWLLRQ--------GFENVYNLQGGIDAWS 97 (101)
T ss_pred EEEECCCCHHHHHHHHHHHHC--------CCCCEEEECCHHHHHH
T ss_conf 899838981599999999985--------9977798476199875
No 415
>TIGR00224 pckA phosphoenolpyruvate carboxykinase (ATP); InterPro: IPR001272 Phosphoenolpyruvate carboxykinase (PEPCK) catalyses the first committed (rate-limiting) step in hepatic gluconeogenesis, namely the reversible decarboxylation of oxaloacetate to phosphoenolpyruvate (PEP) and carbon dioxide, using either ATP or GTP as a source of phosphate. The ATP-utilising (4.1.1.49 from EC) and GTP-utilising (4.1.1.32 from EC) enzymes form two divergent subfamilies, which have little sequence similarity but which retain conserved active site residues. ATP-utilising PEPCKs are monomers or oligomers of identical subunits found in certain bacteria, yeast, trypanosomatids, and plants, while GTP-utilising PEPCKs are mainly monomers found in animals and some bacteria . Both require divalent cations for activity, such as magnesium or manganese. One cation interacts with the enzyme at metal binding site 1 to elicit activation, while the second cation interacts at metal binding site 2 to serve as a metal-nucleotide substrate. In bacteria, fungi and plants, PEPCK is involved in the glyoxylate bypass, an alternative to the tricarboxylic acid cycle. PEPCK helps to regulate blood glucose levels. The rate of gluconeogenesis can be controlled through transcriptional regulation of the PEPCK gene by cAMP (the mediator of glucagon and catecholamines), glucocorticoids and insulin. In general, PEPCK expression is induced by glucagon, catecholamines and glucocorticoids during periods of fasting and in response to stress, but is inhibited by (glucose-induced) insulin upon feeding . With type II diabetes, this regulation system can fail, resulting in increased gluconeogenesis that in turn raises glucose levels . PEPCK consists of an N-terminal and a catalytic C-terminal domain, with the active site and metal ions located in a cleft between them. Both domains have an alpha/beta topology that is partly similar to one another , . Substrate binding causes PEPCK to undergo a conformational change, which accelerates catalysis by forcing bulk solvent molecules out of the active site . PCK uses an alpha/beta/alpha motif for nucleotide binding, this motif differing from other kinase domains. GTP-utilising PEPCK has a PEP-binding domain and two kinase motifs to bind GTP and magnesium. This entry represents ATP-utilising phosphoenolpyruvate carboxykinase enzymes.; GO: 0004612 phosphoenolpyruvate carboxykinase (ATP) activity, 0005524 ATP binding, 0006094 gluconeogenesis.
Probab=30.77 E-value=40 Score=14.69 Aligned_cols=56 Identities=16% Similarity=0.201 Sum_probs=41.1
Q ss_pred CCCCCCCHHHHHHHHHHHHH--CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 06875781899999865201--01333123565554035677766543200134786002343546
Q gi|254780432|r 67 VSNLYQSTQQEIFANHLIHS--TFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGA 130 (392)
Q Consensus 67 ~~~~~~~~~~~~la~~L~~~--~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~ 130 (392)
+...-.|+..+.|-|+-++. .|+++-.++++|+-++++-++ .|+..|+|.|+.+..
T Consensus 18 v~~v~~N~s~~~L~e~~l~~~L~G~~~gvlt~~GAv~~~tG~~--------TGRSPKDK~IV~e~~ 75 (549)
T TIGR00224 18 VKNVRYNPSAAQLYEEELKPSLEGYNKGVLTSTGAVAADTGIF--------TGRSPKDKYIVEEET 75 (549)
T ss_pred CCHHHCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCEEEECCCC--------CCCCCCCCEEECCCC
T ss_conf 1211037867887354201012320230000343122344601--------077887654667888
No 416
>cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.
Probab=29.49 E-value=42 Score=14.55 Aligned_cols=18 Identities=22% Similarity=0.366 Sum_probs=12.1
Q ss_pred HHHHHHCCCCCCCCEEEE
Q ss_conf 232211022345721310
Q gi|254780432|r 198 FLQQLRKICDDIDALLIF 215 (392)
Q Consensus 198 ~l~~l~~lc~~~g~llI~ 215 (392)
+++.+...+.++++++|+
T Consensus 170 alRklt~~l~k~~~~lIf 187 (325)
T cd00983 170 ALRKLTGSINKSNTTVIF 187 (325)
T ss_pred HHHHHHHHHCCCCCEEEE
T ss_conf 999999875337807999
No 417
>KOG1412 consensus
Probab=28.89 E-value=43 Score=14.49 Aligned_cols=189 Identities=18% Similarity=0.267 Sum_probs=98.5
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC----CCCCCC---CCCCCEEE--CCCCCCC--C-C-CCCC
Q ss_conf 1124621012322110223457213101100344445553----101112---45453021--0344444--4-3-4432
Q gi|254780432|r 189 GGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKL----FAYEWA---NVKPDIMT--IAKGMGG--G-F-PIGA 255 (392)
Q Consensus 189 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~----f~~e~~---gi~PDi~~--~gK~l~g--G-~-P~sa 255 (392)
-|+ -|.+|=|..+.+..++.+..-.+|--.-|| -+|.. ||..++ | -+=++| ++|.+|- - . -+..
T Consensus 191 TGm-DPT~EQW~qia~vik~k~lf~fFDiAYQGf-ASGD~~~DawAiR~fV~~g-~e~fv~QSFaKNfGlYneRvGnltv 267 (410)
T KOG1412 191 TGM-DPTREQWKQIADVIKSKNLFPFFDIAYQGF-ASGDLDADAWAIRYFVEQG-FELFVCQSFAKNFGLYNERVGNLTV 267 (410)
T ss_pred CCC-CCCHHHHHHHHHHHHHCCCEEEEEHHHCCC-CCCCCCCCHHHHHHHHHCC-CEEEEEHHHHHHCCCCCCCCCCEEE
T ss_conf 789-978899999999997447603542021012-4699541089999999618-7388776656431664655363699
Q ss_pred CCCCCCCCCCC-CCCC--CCCCCCCCCCC--HHHHHHHHHHHH-CCCCCCHHHHHCC-------HHHHHHHHHHHHCCCE
Q ss_conf 10001112222-2332--23453211110--012334554320-1222101121000-------0268899998867970
Q gi|254780432|r 256 CLATNEVAACM-NQGS--HGSTYGGNVLA--MVLGEKVLNIIQ-SDGFLENVINIAK-------ILFEGLTAIKNRFPNM 322 (392)
Q Consensus 256 v~~~~~i~~~~-~~~~--~~~T~~gnpl~--~aaa~a~L~~l~-~~~l~~~~~~~g~-------~l~~~L~~l~~~~~~~ 322 (392)
|+-+..+...+ .+.+ .-++++ ||.+ .....++|+-=+ ++.+.+.++.|+. .|++.|..|.- |+-
T Consensus 268 v~~n~a~i~~v~SQl~lviR~~~S-NPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~T--PGt 344 (410)
T KOG1412 268 VVNNPAVIAGVKSQLTLVIRSNWS-NPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKT--PGT 344 (410)
T ss_pred EECCHHHHHHHHHHHHHHHHHCCC-CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCC
T ss_conf 944755777788777998861267-88511458999984688889999999999999999999999999986189--985
Q ss_pred E-EEECCCEEEEEEEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 7-5504640099987249989999999968989962689889955898688999999999999999985
Q gi|254780432|r 323 F-LEVRGQGLLIGLKTVFSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 323 v-~~vRG~Gl~~~ie~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
- --++.+|++- . ...++..+.....++.++....| +|-++ -| +...++....+|+++++.+
T Consensus 345 WDHI~~QiGMFS-y-TGLtp~qV~~li~~h~vyLl~~G--RInis-GL--N~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412 345 WDHITQQIGMFS-Y-TGLTPAQVDHLIENHKVYLLSDG--RINIS-GL--NMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred HHHHHHHCCCEE-E-CCCCHHHHHHHHHHCEEEEECCC--CEEEE-CC--CCCCHHHHHHHHHHHHHHH
T ss_conf 778876505143-1-48998999999873638994388--37661-45--6545899999999999752
No 418
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional
Probab=28.51 E-value=19 Score=16.90 Aligned_cols=36 Identities=17% Similarity=0.386 Sum_probs=26.1
Q ss_pred CCCCCCCCCCCCC-CCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 3322223332222-11246210123221102234572
Q gi|254780432|r 176 DTAAILIEPIQGE-GGVRKVPEEFLQQLRKICDDIDA 211 (392)
Q Consensus 176 ~iAavi~Epv~g~-~G~~~~~~~~l~~l~~lc~~~g~ 211 (392)
++.-++++||+-. .|....+++-.+.+++|.-...+
T Consensus 326 ~~~~vVlDPVMVatSG~~Ll~~~a~~~l~~Llp~a~l 362 (738)
T PRK09517 326 RHPVVVLDPVMVATSGDRLLDADAEEALRRLLVHVDV 362 (738)
T ss_pred CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEE
T ss_conf 9985324864674675432676999999987350507
No 419
>PRK11524 putative methyltransferase; Provisional
Probab=28.44 E-value=32 Score=15.33 Aligned_cols=12 Identities=17% Similarity=0.019 Sum_probs=4.3
Q ss_pred HHCCHHHHHHHH
Q ss_conf 100002688999
Q gi|254780432|r 303 NIAKILFEGLTA 314 (392)
Q Consensus 303 ~~g~~l~~~L~~ 314 (392)
..+.+..++|.+
T Consensus 252 ~~~~~~~~~~~~ 263 (284)
T PRK11524 252 VASHYSAEELAK 263 (284)
T ss_pred HCCCCCHHHHHH
T ss_conf 353465889998
No 420
>COG0062 Uncharacterized conserved protein [Function unknown]
Probab=28.28 E-value=44 Score=14.42 Aligned_cols=65 Identities=20% Similarity=0.353 Sum_probs=43.4
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCC-CCCCCCCCCCCCCCCCCEE-ECCC
Q ss_conf 3222233322221124621012322110223457213101100344-4455531011124545302-1034
Q gi|254780432|r 177 TAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGY-GRTGKLFAYEWANVKPDIM-TIAK 245 (392)
Q Consensus 177 iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~-GRtG~~f~~e~~gi~PDi~-~~gK 245 (392)
-+.+|++-+.|.|--.++ ++=.+.+.+...+.+...++=.|-+|+ ..||.-. ..-+.+|++ ||++
T Consensus 119 ~~dvIVDalfG~G~~g~l-rep~a~~Ie~iN~~~~pivAVDiPSGl~~dtG~~~---~~av~Ad~TVTf~~ 185 (203)
T COG0062 119 SADVIVDALFGTGLSGPL-REPFASLIEAINASGKPIVAVDIPSGLDADTGEVL---GAAVKADLTVTFGA 185 (203)
T ss_pred CCCEEEEECEECCCCCCC-CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC---CCCEECCEEEEECC
T ss_conf 378999804206878888-60899999999734990699868988677777656---75410157999367
No 421
>PRK00913 leucyl aminopeptidase; Provisional
Probab=27.78 E-value=45 Score=14.36 Aligned_cols=62 Identities=21% Similarity=0.401 Sum_probs=36.9
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCE-EEECCCC---CCCCCC---C-------CCCCCCCCC---CCCCEEECCCCCC---C
Q ss_conf 12462101232211022345721-3101100---344445---5-------531011124---5453021034444---4
Q gi|254780432|r 190 GVRKVPEEFLQQLRKICDDIDAL-LIFDEVQ---TGYGRT---G-------KLFAYEWAN---VKPDIMTIAKGMG---G 249 (392)
Q Consensus 190 G~~~~~~~~l~~l~~lc~~~g~l-lI~DEV~---tG~GRt---G-------~~f~~e~~g---i~PDi~~~gK~l~---g 249 (392)
+.+..|..|-+..+++++++++- -|+||-+ .|||-. | ++--.+|.+ -.+.++.+|||++ |
T Consensus 185 ~n~~tP~~~a~~a~~~~~~~~~~v~v~~~~~l~~~gmg~~laVg~GS~~~p~li~l~y~g~~~~~~~i~lVGKGvtFDsG 264 (491)
T PRK00913 185 PNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIVLEYKGGPKDAKPIALVGKGLTFDSG 264 (491)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCEEEEECCEEEEECC
T ss_conf 70189999999999987650978999639999866997332562576899847999967899876228984350475068
Q ss_pred CC
Q ss_conf 43
Q gi|254780432|r 250 GF 251 (392)
Q Consensus 250 G~ 251 (392)
|+
T Consensus 265 G~ 266 (491)
T PRK00913 265 GI 266 (491)
T ss_pred CC
T ss_conf 74
No 422
>COG1850 RbcL Ribulose 1,5-bisphosphate carboxylase, large subunit [Carbohydrate transport and metabolism]
Probab=27.37 E-value=46 Score=14.31 Aligned_cols=18 Identities=33% Similarity=0.728 Sum_probs=7.6
Q ss_pred CCCCCCCEEECCCCCCCC
Q ss_conf 124545302103444444
Q gi|254780432|r 233 WANVKPDIMTIAKGMGGG 250 (392)
Q Consensus 233 ~~gi~PDi~~~gK~l~gG 250 (392)
|+.+.|=+-+-|-|+-.|
T Consensus 341 ~~~~~~~fPVaSgGihpg 358 (429)
T COG1850 341 WAHIKPVFPVASGGIHPG 358 (429)
T ss_pred CCCCCCCCCCCCCCCCCC
T ss_conf 345776620467785844
No 423
>PRK08286 cbiC precorrin-8X methylmutase; Validated
Probab=27.22 E-value=27 Score=15.87 Aligned_cols=53 Identities=19% Similarity=0.283 Sum_probs=35.3
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCC---CCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 454530210344444434432100---01112222233-2234532111100123345543201
Q gi|254780432|r 235 NVKPDIMTIAKGMGGGFPIGACLA---TNEVAACMNQG-SHGSTYGGNVLAMVLGEKVLNIIQS 294 (392)
Q Consensus 235 gi~PDi~~~gK~l~gG~P~sav~~---~~~i~~~~~~~-~~~~T~~gnpl~~aaa~a~L~~l~~ 294 (392)
.+.|.+++ |.|+|.|-+ ++.+.+.--|. ..-++-+|+|++.|+-++-|-++++
T Consensus 156 ~~~PaLVI-------G~PVGFV~A~ESKe~L~~~~vP~It~~GrkGGS~vAaAivNALl~~~~e 212 (213)
T PRK08286 156 QVTVDAVV-------GVPVGFVGAAESKEALTESHIPAIAALGRKGGSNVAAAIVNAILYHLRE 212 (213)
T ss_pred CCCCCEEE-------ECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99875577-------5585545719999999868999799716987499999999999998502
No 424
>PHA01747 putative ATP-dependent protease
Probab=27.13 E-value=21 Score=16.55 Aligned_cols=89 Identities=19% Similarity=0.289 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHHCCC-CCCCCE-----EEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 462101232211022-345721-----31011003444455531011124545302103444444344321000111222
Q gi|254780432|r 192 RKVPEEFLQQLRKIC-DDIDAL-----LIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGGFPIGACLATNEVAAC 265 (392)
Q Consensus 192 ~~~~~~~l~~l~~lc-~~~g~l-----lI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG~P~sav~~~~~i~~~ 265 (392)
+.-||-|-+-+.+.- ...|++ +|+||||| ++ .+ .+..=+-+++-|+.++. +.|..=.+.
T Consensus 219 ~tEpPtya~LvyDAktn~~G~Vf~s~GlifDEIqt-wk------ds---~~~aI~s~l~TGmenc~-----WtR~agtes 283 (425)
T PHA01747 219 YTEPPTYANLVYDAKTNALGLVFLSNGLIFDEIQT-WK------DS---NMRAINSTLSTGMENCV-----WTRGAGTES 283 (425)
T ss_pred CCCCCCHHHHHHHCCCCCEEEEEECCCEEEEHHHH-CC------CC---HHHHHHHHHHHCCHHEE-----EECCCCCCC
T ss_conf 05896277776431235101577338658754443-26------64---08899999861101116-----524767776
Q ss_pred CCC---CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCH
Q ss_conf 223---32234532111100123345543201222101
Q gi|254780432|r 266 MNQ---GSHGSTYGGNVLAMVLGEKVLNIIQSDGFLEN 300 (392)
Q Consensus 266 ~~~---~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~ 300 (392)
-.+ ...---|.|||.+ -+|+.+.+++.+++
T Consensus 284 da~tI~rcIPIifaGN~~s-----~tld~y~tp~~i~~ 316 (425)
T PHA01747 284 DAATIVRCIPIIFAGNPDS-----STLDTYQTPNYIKN 316 (425)
T ss_pred CCCHHHHCEEEEECCCCCC-----EEEEEECCCCHHHH
T ss_conf 6502231202898579874-----00020038407999
No 425
>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunit; InterPro: IPR014006 Succinate:quinone oxidoreductase (1.3.5.1 from EC) refers collectively to succinate:quinone reductase (SQR, or Complex II) and quinol:fumarate reductase (QFR) . SQR is found in aerobic organisms, and catalyses the oxidation of succinate to fumarate in the citric acid cycle and donates the electrons to quinone in the membrane. QFR can be found in anaerobic cells respiring with fumarate as terminal electron acceptor. SQR and QFR are very similar in composition and structure, despite catalysing opposite reactions in vivo. They are thought to have evolved from a common ancestor, and in Escherichia coli they are capable of functionally replacing each other . Succinate:quinone oxidoreductases consist of a peripheral domain, exposed to the cytoplasm in bacteria and to the matrix in mitochondria, and a membrane-integral anchor domain that spans the membrane (Fig. 1). The peripheral part, which contains the dicarboxylate binding site, is composed of a flavoprotein subunit, with one covalently bound FAD, and an iron-sulphur protein subunit containing three iron-sulphur clusters. The membrane-integral domain functions to anchor the peripheral domain to the membrane and is required for quinone reduction and oxidation. The anchor domain shows the largest variability in composition and primary sequence, being composed either of one large subunit, or two smaller subunits, which may, or may not, contain protoheme groups. This entry represents the flavoprotein subunit found in both the SQR and QFR enzymes. This subunit contains an N-terminal domain which binds the FAD cofactor, a central catalytic domain with an unsual fold, and a C-terminal domain whose role is unclear , , . The dicarboxylate binding site is located between the FAD and catalytic domains..
Probab=27.09 E-value=47 Score=14.28 Aligned_cols=29 Identities=21% Similarity=0.306 Sum_probs=14.8
Q ss_pred CEEEECCCCC----CCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 2131011003----44445553101112454530210344
Q gi|254780432|r 211 ALLIFDEVQT----GYGRTGKLFAYEWANVKPDIMTIAKG 246 (392)
Q Consensus 211 ~llI~DEV~t----G~GRtG~~f~~e~~gi~PDi~~~gK~ 246 (392)
-|+-+=|+.| |+=|+|. +=--|++||||.
T Consensus 412 GLfAaGE~ACVSVHGANRLGs-------NSLle~vVFGr~ 444 (636)
T TIGR01812 412 GLFAAGECACVSVHGANRLGS-------NSLLELVVFGRI 444 (636)
T ss_pred CEEEEEEEEECCCCCCCCCCH-------HHHHHHHHHHHH
T ss_conf 102201022203412130605-------679999999799
No 426
>pfam02603 Hpr_kinase_N HPr Serine kinase N terminus. This family represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phospho-relay system in control of carbon catabolic repression in bacteria. This kinase in unusual in that it recognizes the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains.
Probab=26.98 E-value=27 Score=15.78 Aligned_cols=42 Identities=21% Similarity=0.377 Sum_probs=29.7
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 6887541012332222333222211246210123221102234572131011
Q gi|254780432|r 166 LQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDE 217 (392)
Q Consensus 166 ~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 217 (392)
.+.+++.+..++.|+|+-- |. .||+ .+.++|++|++.+.--.
T Consensus 71 ~~~l~~l~~~~~P~iIvt~-----~~-~~p~----~l~~~a~~~~vPll~t~ 112 (127)
T pfam02603 71 KERLEKLFSYDTPCLIVTR-----GL-EPPE----ELLEAAKKYGIPLLRSK 112 (127)
T ss_pred HHHHHHHHCCCCCEEEEEC-----CC-CCCH----HHHHHHHHHCCCEEECC
T ss_conf 9999998575998899979-----99-9999----99999999799579828
No 427
>TIGR00476 selD selenide, water dikinase; InterPro: IPR004536 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3' or 5' non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelD, known as selenophosphate synthetase, selenium donor protein, and selenide, water dikinase. SelD provides reduced selenium for the selenium transferase SelA. This protein itself contains selenocysteine in many species; any sequence scoring above the trusted cut-off but not aligning to the beginning of the HMM is likely have selenocysteine residue incorrectly interpreted as a stop codon upstream of the given sequence.; GO: 0004756 selenide water dikinase activity, 0005524 ATP binding.
Probab=26.80 E-value=40 Score=14.70 Aligned_cols=126 Identities=15% Similarity=0.236 Sum_probs=68.6
Q ss_pred CCCHHHHHHHHCCCCCCCCEE-----EECC------CCCCCCCCCCCCCCCCCCCCC-CEEECCCCCCCCCCCCCCCCCC
Q ss_conf 621012322110223457213-----1011------003444455531011124545-3021034444443443210001
Q gi|254780432|r 193 KVPEEFLQQLRKICDDIDALL-----IFDE------VQTGYGRTGKLFAYEWANVKP-DIMTIAKGMGGGFPIGACLATN 260 (392)
Q Consensus 193 ~~~~~~l~~l~~lc~~~g~ll-----I~DE------V~tG~GRtG~~f~~e~~gi~P-Di~~~gK~l~gG~P~sav~~~~ 260 (392)
..-++-+++-++.|++.++.+ |.|- +.||.+|++++. ...+.+| |++++-|.||=|. .+.-+
T Consensus 128 ~v~Rev~~G~~d~~reakt~~~GGhtil~pwp~~Gg~vtgv~~~~~~~--~~~~a~~G~~L~LTKPLGtqv----~~~~~ 201 (372)
T TIGR00476 128 EVVREVIKGFKDACREAKTALVGGHTILNPWPVFGGAVTGVCPEEEVI--TKSGAQVGDVLILTKPLGTQV----LVAVE 201 (372)
T ss_pred CHHHHHHHHHHHHHHHCCEEEECCEEECCCCCCCCCEEEEECCCCCEE--CCCCCCCCCEEEEECCCHHHH----HHHHH
T ss_conf 010687765888887689079736211276200054063102788475--258874241678517516899----99876
Q ss_pred CCCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEE
Q ss_conf 1122222---33223453211110012334554320122-2101121000026889999886797075504640099
Q gi|254780432|r 261 EVAACMN---QGSHGSTYGGNVLAMVLGEKVLNIIQSDG-FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLI 333 (392)
Q Consensus 261 ~i~~~~~---~~~~~~T~~gnpl~~aaa~a~L~~l~~~~-l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~ 333 (392)
+..+.++ .-..+-|---+.+ +-..+++.|.+-| +.-++-..++-+... .-....+||-|-|++.
T Consensus 202 ~~~~~~~~~nkik~~i~~ee~~~---~~~~A~e~M~~~Nryalkal~~A~~~~~~------~~~~A~TDvTGFGlLG 269 (372)
T TIGR00476 202 KKLDIFKDLNKIKLSILKEEREL---IINEAIENMARLNRYALKALRKAAELMNS------KDAKALTDVTGFGLLG 269 (372)
T ss_pred HCCCCHHCCCCEEEEEECCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCCEEECCCCCCHHH
T ss_conf 31120011041467860752788---99899999998889999999998876644------1871531145654568
No 428
>PRK13699 putative methylase; Provisional
Probab=26.76 E-value=39 Score=14.81 Aligned_cols=10 Identities=20% Similarity=0.388 Sum_probs=3.2
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780432|r 374 EEIHEGLERI 383 (392)
Q Consensus 374 ~eid~~i~~l 383 (392)
+=++-+.++|
T Consensus 196 ~Y~~ia~~Rl 205 (227)
T PRK13699 196 QYHRAGQQRL 205 (227)
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 429
>PRK00943 selenophosphate synthetase; Provisional
Probab=26.47 E-value=24 Score=16.12 Aligned_cols=75 Identities=25% Similarity=0.296 Sum_probs=41.8
Q ss_pred CCCCCCCCCCCCCCCCCCCC----C----HHHHHHHHCCCCCCCCEEEE-----C-C-----CCCCCCCCCCCCCCCCCC
Q ss_conf 23322223332222112462----1----01232211022345721310-----1-1-----003444455531011124
Q gi|254780432|r 175 NDTAAILIEPIQGEGGVRKV----P----EEFLQQLRKICDDIDALLIF-----D-E-----VQTGYGRTGKLFAYEWAN 235 (392)
Q Consensus 175 ~~iAavi~Epv~g~~G~~~~----~----~~~l~~l~~lc~~~g~llI~-----D-E-----V~tG~GRtG~~f~~e~~g 235 (392)
.|++|.=.+|+..-.=+..| + .+.+++.++.|+++|+.++= + | +.+|.+...+++ ...+
T Consensus 90 sDi~AmGa~P~~aL~~~~~p~~~l~~e~l~~il~g~~~~~~e~gv~ivGGHT~~~~e~~ig~~v~G~~~~~~~~--~~~~ 167 (347)
T PRK00943 90 SDVYAMGGKPIMALAILGWPINVLPPEVAREVLEGGRDVCREAGIPLAGGHSIDAPEPIFGLAVTGVVHPERVK--RNAG 167 (347)
T ss_pred HHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCEEECCCCEEEEEEEEEECCCCCC--CCCC
T ss_conf 68988389488999884302021679999999999999999859905346567546652556898677463230--2688
Q ss_pred CCC-CEEECCCCCCCCC
Q ss_conf 545-3021034444443
Q gi|254780432|r 236 VKP-DIMTIAKGMGGGF 251 (392)
Q Consensus 236 i~P-Di~~~gK~l~gG~ 251 (392)
.+| |.+++.|.||.|.
T Consensus 168 a~~GD~liLTKplGtgi 184 (347)
T PRK00943 168 AKAGDVLILTKPLGIGV 184 (347)
T ss_pred CCCCCEEEEECCCCCHH
T ss_conf 88888899825750149
No 430
>cd03325 D-galactonate_dehydratase D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactnate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway. D-galactonate dehydratase belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=26.38 E-value=18 Score=17.04 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCEEECC
Q ss_conf 6210123221102234572131011003444455531011124-545302103
Q gi|254780432|r 193 KVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWAN-VKPDIMTIA 244 (392)
Q Consensus 193 ~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~g-i~PDi~~~g 244 (392)
|.|++-++.+++++++.++.+..||...+..-.=.+......+ ++||+.-+|
T Consensus 210 P~~~~d~~~~~~l~~~~~~PIa~gE~~~~~~~~~~~i~~~a~di~~~d~~~~G 262 (352)
T cd03325 210 PVLPENVEALAEIAARTTIPIATGERLFSRWDFKELLEDGAVDIIQPDISHAG 262 (352)
T ss_pred CCCCCCHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCCCEEECCCCCCC
T ss_conf 88988999999999876999971783787677899997687766821777359
No 431
>pfam00586 AIRS AIR synthase related protein, N-terminal domain. This family includes Hydrogen expression/formation protein HypE, AIR synthases EC:6.3.3.1, FGAM synthase EC:6.3.5.3 and selenide, water dikinase EC:2.7.9.3. The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain.
Probab=26.24 E-value=20 Score=16.62 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=26.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-------HHHHHHHHCCCCCCCCEEE
Q ss_conf 1233222233322221124621-------0123221102234572131
Q gi|254780432|r 174 SNDTAAILIEPIQGEGGVRKVP-------EEFLQQLRKICDDIDALLI 214 (392)
Q Consensus 174 ~~~iAavi~Epv~g~~G~~~~~-------~~~l~~l~~lc~~~g~llI 214 (392)
-.+++|.=.+|+.....+..|+ .++++++.+.|+++|+.++
T Consensus 44 ~sDi~a~Ga~P~~~~~~l~~~~~~~~~~l~~~~~g~~~~~~~~g~~iv 91 (95)
T pfam00586 44 LSDLAAMGAKPLAFLDGLALGEGLDPEWLEEIVRGIAEAANEFGVPLV 91 (95)
T ss_pred HHHHHHCCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 861997499916507989769975236899999999999999299883
No 432
>PTZ00276 biotin/lipoate protein ligase; Provisional
Probab=26.11 E-value=48 Score=14.17 Aligned_cols=10 Identities=10% Similarity=0.119 Sum_probs=4.2
Q ss_pred CHHHHHHHHH
Q ss_conf 0356777665
Q gi|254780432|r 101 SVECAIKTAR 110 (392)
Q Consensus 101 A~e~Aiklar 110 (392)
-|+.|-++|.
T Consensus 18 TN~~ak~~a~ 27 (245)
T PTZ00276 18 TMDVARTMLA 27 (245)
T ss_pred HHHHHHHHHH
T ss_conf 9999999996
No 433
>pfam02110 HK Hydroxyethylthiazole kinase family.
Probab=25.96 E-value=49 Score=14.15 Aligned_cols=20 Identities=0% Similarity=0.257 Sum_probs=15.1
Q ss_pred HHHHHHHHCCCCCCCCEEEE
Q ss_conf 01232211022345721310
Q gi|254780432|r 196 EEFLQQLRKICDDIDALLIF 215 (392)
Q Consensus 196 ~~~l~~l~~lc~~~g~llI~ 215 (392)
.+-.+..++++++|+..+++
T Consensus 138 ~~~~~~a~~lA~~~~~vvvv 157 (246)
T pfam02110 138 TAAIRAAQRVARKYGTVVVV 157 (246)
T ss_pred HHHHHHHHHHHHHHCCEEEE
T ss_conf 78999999999981989998
No 434
>pfam00016 RuBisCO_large Ribulose bisphosphate carboxylase large chain, catalytic domain. The C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold.
Probab=25.60 E-value=49 Score=14.11 Aligned_cols=62 Identities=18% Similarity=0.305 Sum_probs=39.7
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCC-CCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 55531011124545302103444444-344-321000111222223322345321111001233455432
Q gi|254780432|r 225 TGKLFAYEWANVKPDIMTIAKGMGGG-FPI-GACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNII 292 (392)
Q Consensus 225 tG~~f~~e~~gi~PDi~~~gK~l~gG-~P~-sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l 292 (392)
.|.+|.+.|.+++|=+-+.|-|+..| +|- --.++ .|++-....+.| |||-+.+|+.++++.=
T Consensus 207 ~g~~f~q~w~~~k~v~PV~SgG~hpg~~p~~~~~~G-~D~il~aGGGi~-----GHP~G~aAGa~A~RqA 270 (309)
T pfam00016 207 RGLFFDQDWASLPGVMPVASGGIHAWHMPALLDILG-DDVVLQFGGGTL-----GHPDGNAAGATANRVA 270 (309)
T ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHCC-CEEEEECCCCCC-----CCCCCHHHHHHHHHHH
T ss_conf 475435654566784243479877013258998719-807997698621-----7998617889999999
No 435
>PTZ00225 60S ribosomal protein L10a; Provisional
Probab=25.57 E-value=8.8 Score=19.01 Aligned_cols=92 Identities=18% Similarity=0.283 Sum_probs=41.2
Q ss_pred HHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-C-CCCCCCCCCCCCCCCCCCCC---CCCC
Q ss_conf 22110223457213101100344445553101112454530210344444-4-34432100011122222332---2345
Q gi|254780432|r 200 QQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGG-G-FPIGACLATNEVAACMNQGS---HGST 274 (392)
Q Consensus 200 ~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~g-G-~P~sav~~~~~i~~~~~~~~---~~~T 274 (392)
+.++.+|++|+..+.-..++-=.||+ +|+.|+. | +|.- +-.++++.+.+.... ..-+
T Consensus 95 k~~kkla~~~D~fia~~~~m~~i~r~-----------------LGp~Lg~~gK~P~~-~~~~~di~~~v~~~k~tVk~r~ 156 (214)
T PTZ00225 95 KLVKKMCNQYDAFLCSESIIKTVPRL-----------------VGPHMHRMGKFPTV-CSPSESLPDKVVELRSTVKFQL 156 (214)
T ss_pred HHHHHHHHHCCEEEECHHHHHHHHHH-----------------HCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHEEEEEE
T ss_conf 78888774269899657888777776-----------------27446778998987-7875468999999862699998
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHH
Q ss_conf 32111100123345543201222101121000026889
Q gi|254780432|r 275 YGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGL 312 (392)
Q Consensus 275 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L 312 (392)
=...-+.+.++... |.++++.+|+...=+.+...|
T Consensus 157 kk~~~~~~~VG~~~---m~~e~l~eNi~a~l~~l~~~l 191 (214)
T PTZ00225 157 KKVLCLGTCVGHVE---MTEEQLRQNVVMAINFLVSLL 191 (214)
T ss_pred CCCCEEEEEEECCC---CCHHHHHHHHHHHHHHHHHHH
T ss_conf 88756888870687---998999999999999999871
No 436
>TIGR00614 recQ_fam ATP-dependent DNA helicase, RecQ family; InterPro: IPR004589 The ATP-dependent DNA helicase RecQ (3.6.1 from EC) is involved in genome maintenance . All homologues tested to date unwind paired DNA, translocating in a 3' to 5' direction and several have a preference for forked or 4-way DNA structures (e.g. Holliday junctions) or for G-quartet DNA. The yeast protein, Sgs1, is present in numerous foci that coincide with sites of de novo synthesis DNA, such as the replication fork, and protein levels peak during S-phase. A model has been proposed for Sgs1p action in the S-phase checkpoint response, both as a 'sensor' for damage during replication and a 'resolvase' for structures that arise at paused forks, such as the four-way 'chickenfoot' structure. The action of Sgs1p may serve to maintain the proper amount and integrity of ss DNA that is necessary for the binding of RPA (replication protein A, the eukaryotic ss DNA-binding protein)DNA pol complexes. Sgs1p would thus function by detecting (or resolving) aberrant DNA structures, and would thus contribute to the full activation of the DNA-dependent protein kinase, Mec1p and the effector kinase, Rad53p. Its ability to bind both the large subunit of RPA and the RecA-like protein Rad51p, place it in a unique position to resolve inappropriate fork structures that can occur when either the leading or lagging strand synthesis is stalled. Thus, RecQ helicases integrate checkpoint activation and checkpoint response. ; GO: 0008026 ATP-dependent helicase activity, 0006310 DNA recombination.
Probab=25.05 E-value=51 Score=14.04 Aligned_cols=134 Identities=17% Similarity=0.287 Sum_probs=63.7
Q ss_pred CCHHHHHHHHCCCCCCCCEEEE-CCCCCCCCCCCCCCCCCC-CCCCCCEEECCCCCCCCCC-CCCCC--------CCCCC
Q ss_conf 2101232211022345721310-110034444555310111-2454530210344444434-43210--------00111
Q gi|254780432|r 194 VPEEFLQQLRKICDDIDALLIF-DEVQTGYGRTGKLFAYEW-ANVKPDIMTIAKGMGGGFP-IGACL--------ATNEV 262 (392)
Q Consensus 194 ~~~~~l~~l~~lc~~~g~llI~-DEV~tG~GRtG~~f~~e~-~gi~PDi~~~gK~l~gG~P-~sav~--------~~~~i 262 (392)
....||+.|..+=.+.++.+|+ ||+-| . +|| -|..||.-.||. |---+| +..+. +++||
T Consensus 117 ~~~~ll~~Le~~Y~~~~~~~iAvDEAHC-i--------SqWGHDFR~~Y~~LG~-Lk~~fP~vP~~ALTATA~~~~~~Di 186 (497)
T TIGR00614 117 KSKSLLQTLEKLYERKGITLIAVDEAHC-I--------SQWGHDFRPDYKALGS-LKQKFPNVPIMALTATASPSVREDI 186 (497)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECEEE-E--------CCCCCCCCHHHHHHHH-HHHHCCCCCEEEEECCCCHHHHHHH
T ss_conf 4647899999988644966999832154-3--------5888874079999657-8885488743643405786789999
Q ss_pred CCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHC---CHHHHHHHHHHHHCCCEEEEECCC-EEEEEE
Q ss_conf 22222---33223453211110012334554320122210112100---002688999988679707550464-009998
Q gi|254780432|r 263 AACMN---QGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIA---KILFEGLTAIKNRFPNMFLEVRGQ-GLLIGL 335 (392)
Q Consensus 263 ~~~~~---~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g---~~l~~~L~~l~~~~~~~v~~vRG~-Gl~~~i 335 (392)
...+. +...... ..++||.-.+.++- +-+...|.++..+-.+--.+-+|. |-+.+.
T Consensus 187 ~~~L~l~~p~~~~~S-----------------FdRPNl~y~v~~K~~n~~~~~~dl~~f~~~~~~s~~~~~G~sGIIYC~ 249 (497)
T TIGR00614 187 LRILNLKNPQVFITS-----------------FDRPNLYYEVRRKTSNTKKILEDLLRFIVKKASSAWEFKGKSGIIYCP 249 (497)
T ss_pred HHHHCCCCCCEEEEC-----------------CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
T ss_conf 987221366246404-----------------668763034005789702589999999875203565245883027528
Q ss_pred EECCCHHHHHHHHHHCCEEE
Q ss_conf 72499899999999689899
Q gi|254780432|r 336 KTVFSPALLAAKFRDECLLT 355 (392)
Q Consensus 336 e~~~~~~~~~~~l~~~Gll~ 355 (392)
--...+.++..|+..||-+
T Consensus 250 -SR~~~e~~a~~L~~~G~~a 268 (497)
T TIGR00614 250 -SRKKSEQVAAELQKLGIAA 268 (497)
T ss_pred -CCHHHHHHHHHHHHCCCEE
T ss_conf -7234899999997558610
No 437
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=24.77 E-value=16 Score=17.40 Aligned_cols=29 Identities=21% Similarity=0.078 Sum_probs=22.7
Q ss_pred CCHHHHHHHHCCCCCCCCEEEECCCCCCC
Q ss_conf 21012322110223457213101100344
Q gi|254780432|r 194 VPEEFLQQLRKICDDIDALLIFDEVQTGY 222 (392)
Q Consensus 194 ~~~~~l~~l~~lc~~~g~llI~DEV~tG~ 222 (392)
.|++=+..+++++++.++.+.+||-..+.
T Consensus 212 ~~~~d~~~~~~l~~~~~~pIa~dEs~~~~ 240 (316)
T cd03319 212 VPAGDDDGLAYLRDKSPLPIMADESCFSA 240 (316)
T ss_pred CCCCCHHHHHHHHHHCCCCEEECCCCCCH
T ss_conf 89999999999999689999935887999
No 438
>PRK05355 phosphoserine aminotransferase; Provisional
Probab=24.66 E-value=51 Score=13.99 Aligned_cols=166 Identities=12% Similarity=0.137 Sum_probs=87.8
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCCCCCCCCCCCCCCCCC---C--------CCCCCCC
Q ss_conf 57213101100344445553101112454530210344444-4344321000111222223---3--------2234532
Q gi|254780432|r 209 IDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGG-GFPIGACLATNEVAACMNQ---G--------SHGSTYG 276 (392)
Q Consensus 209 ~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~g-G~P~sav~~~~~i~~~~~~---~--------~~~~T~~ 276 (392)
.+++||+|=.-.=++| .+-++.+|+. ...--|.||- | +..|+.|+++++.-.+ . ...++|+
T Consensus 165 ~~~pLV~DmSS~~lsr---piD~~~~d~i--YagaQKNlGpaG--vtvvIvr~~ll~~~~~~iP~~l~y~~~~~~~Sl~N 237 (360)
T PRK05355 165 GDVPLVADMSSDILSR---PIDVSKFGLI--YAGAQKNIGPAG--LTIVIVREDLLGRALPNIPSMLDYKTHADNDSMYN 237 (360)
T ss_pred CCCCEEEECCCCCCCC---CCCHHHCCEE--EEECCCCCCCCC--CEEEEEEHHHHHCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 8984799734543477---6777891579--987433578765--18999759996223668960530999986367666
Q ss_pred CCCC-CHHHHHHHHHHHHCCC----CCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC----HHHHHHH
Q ss_conf 1111-0012334554320122----21011210000268899998867970755046400999872499----8999999
Q gi|254780432|r 277 GNVL-AMVLGEKVLNIIQSDG----FLENVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS----PALLAAK 347 (392)
Q Consensus 277 gnpl-~~aaa~a~L~~l~~~~----l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~----~~~~~~~ 347 (392)
-.|+ ++-.+..+++-|++.+ ..++.+++.+.|.+-+.+- +-+...+ +..-+=.|. +.|... .+.+.+.
T Consensus 238 TPp~f~iy~~~lvl~Wl~~~GGl~~~~~~n~~KA~lLY~~iD~s-~fy~~~v-~~~~RS~mN-V~F~~~~~~l~~~Fl~~ 314 (360)
T PRK05355 238 TPPTFAIYLAGLVFKWLKEQGGVAAIEKRNQEKAALLYDAIDSS-DFYRNPV-APENRSRMN-VPFTLADEELDKKFLAE 314 (360)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCC-CHHHCCCCE-EEEECCCHHHHHHHHHH
T ss_conf 88428999999999999861769999999999899999998607-8635889-856568654-47871877789999999
Q ss_pred HHHCCEEEEE----CCCCEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9968989962----68988995589868899999999999999
Q gi|254780432|r 348 FRDECLLTAP----SSDNVVRILPPLTITAEEIHEGLERIERT 386 (392)
Q Consensus 348 l~~~Gll~~~----~~~~~irl~Ppl~it~~eid~~i~~l~~a 386 (392)
+.++|+.-.. .|+=++-+.+ .++.++++.+++-+++-
T Consensus 315 a~~~Gl~~LkGhRsvGG~RaSlYN--a~~~e~V~~L~~fm~~F 355 (360)
T PRK05355 315 AEAAGLVGLKGHRSVGGMRASIYN--AMPLEGVQALVDFMKEF 355 (360)
T ss_pred HHHCCCCCCCCCCCCCCEEEEECC--CCCHHHHHHHHHHHHHH
T ss_conf 998798666687653852788017--99999999999999999
No 439
>cd03317 NAAAR N-acylamino acid racemase (NAAAR), an octameric enzyme that catalyzes the racemization of N-acylamino acids. NAAARs act on a broad range of N-acylamino acids rather than amino acids. Enantiopure amino acids are of industrial interest as chiral building blocks for antibiotics, herbicides, and drugs. NAAAR is a member of the enolase superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=24.62 E-value=23 Score=16.24 Aligned_cols=49 Identities=8% Similarity=0.023 Sum_probs=29.1
Q ss_pred CHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC-CCCCEEEC
Q ss_conf 10123221102234572131011003444455531011124-54530210
Q gi|254780432|r 195 PEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWAN-VKPDIMTI 243 (392)
Q Consensus 195 ~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~g-i~PDi~~~ 243 (392)
+++=+..++++.++..+.+.+||..++...-=.+......+ ++||+..+
T Consensus 213 ~~~d~~~~~~l~~~~~~pIa~~E~~~~~~~~~~~i~~~a~div~~d~~~~ 262 (354)
T cd03317 213 AADDLIDHAELQKLLKTPICLDESIQSAEDARKAIELGACKIINIKPGRV 262 (354)
T ss_pred CCCCHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 72277776556415899888188868878899998769976465456536
No 440
>TIGR00095 TIGR00095 putative methyltransferase; InterPro: IPR004398 This is a family of conserved hypothetical proteins, which includes a putative methylase..
Probab=24.26 E-value=52 Score=13.95 Aligned_cols=79 Identities=22% Similarity=0.303 Sum_probs=39.8
Q ss_pred CCCHHHHHCCHHHHHHHHHHHHC--CCEEEEECCCEEEEEEEECCCHH-HHHHHHHHCCEEEEECCCCEEEECCCCCCCH
Q ss_conf 21011210000268899998867--97075504640099987249989-9999999689899626898899558986889
Q gi|254780432|r 297 FLENVINIAKILFEGLTAIKNRF--PNMFLEVRGQGLLIGLKTVFSPA-LLAAKFRDECLLTAPSSDNVVRILPPLTITA 373 (392)
Q Consensus 297 l~~~~~~~g~~l~~~L~~l~~~~--~~~v~~vRG~Gl~~~ie~~~~~~-~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~ 373 (392)
++|.-++..+.+.+.|+.+.++. +.-...+ ..+.. .....+..+. ..-+.|++=||+....
T Consensus 83 f~E~d~~~~~~l~~N~~~L~nrlk~~~~~~~~-----------~~~~~~~~~~~~~~~t-----s~~d~iylDPPf~~~~ 146 (210)
T TIGR00095 83 FVEQDKKVAQTLKENLSTLKNRLKLSGEQATV-----------LNDAERALLFLAKKQT-----SPFDIIYLDPPFNTGL 146 (210)
T ss_pred EEECCHHHHHHHHHHHHHHHHHHCCCCCEEEE-----------HHHHHHHHHHHHCCCC-----CCEEEEEECCCCCCCC
T ss_conf 87368679999999999988871585300000-----------0025666577651799-----6114787148888761
Q ss_pred HHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999999852
Q gi|254780432|r 374 EEIHEGLERIERTAIKLS 391 (392)
Q Consensus 374 ~eid~~i~~l~~al~~L~ 391 (392)
.|.+.+++.+.+++..|.
T Consensus 147 ad~~~~l~l~~~alerl~ 164 (210)
T TIGR00095 147 ADLEAILELLGEALERLN 164 (210)
T ss_pred CCHHHHHHHHHHHHHHHH
T ss_conf 037999999999999873
No 441
>cd00245 Glm_e Coenzyme B12-dependent glutamate mutase epsilon subunit-like family; contains proteins similar to Clostridium cochlearium glutamate mutase (Glm) and Streptomyces tendae Tu901 NikV. Glm catalyzes a carbon-skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate. The first step in the catalysis is a homolytic cleavage of the Co-C bond of the coenzyme B12 cofactor to generate a 5'-deoxyadenosyl radical. This radical then initiates the rearrangement reaction. C. cochlearium Glm is a sigma2epsilon2 heterotetramer. Glm plays a role in glutamate fermentation in Clostridium sp. and in members of the family Enterobacteriaceae, and in the synthesis of the lipopeptide antibiotic friulimicin in Actinoplanes friuliensis. S. tendae Tu901 glutamate mutase-like proteins NikU and NIkV participate in the synthesis of the peptidyl nucleoside antibiotic nikkomycin. NikU and NikV proteins have sequence similarity to Clostridium Glm sigma and epsilon components respectively, and may
Probab=23.99 E-value=34 Score=15.15 Aligned_cols=121 Identities=21% Similarity=0.247 Sum_probs=63.7
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCEEEECCC--CCCCCCCCCCCCCCCCCCCCCEEECCCCC-CCCCCCCCCCCCCCC-CCC
Q ss_conf 12462101232211022345721310110--03444455531011124545302103444-444344321000111-222
Q gi|254780432|r 190 GVRKVPEEFLQQLRKICDDIDALLIFDEV--QTGYGRTGKLFAYEWANVKPDIMTIAKGM-GGGFPIGACLATNEV-AAC 265 (392)
Q Consensus 190 G~~~~~~~~l~~l~~lc~~~g~llI~DEV--~tG~GRtG~~f~~e~~gi~PDi~~~gK~l-~gG~P~sav~~~~~i-~~~ 265 (392)
|...-+..=++.|+++|++|=--+=.|+| .|.| +||.|.-|-=-.-+-+| +-|-.+++..+..++ ...
T Consensus 211 Gnl~QDiaai~aL~~l~~eyl~~~g~~D~~v~tV~--------hqwMG~FP~d~~~A~~li~~~a~~A~~~gA~kvIvKT 282 (428)
T cd00245 211 GNLTQDIAALRALRELAKEYLPKYGYKDVDIHTVF--------HQWMGGFPRDESGAFGLIGYAATIAALSGATKVIVKT 282 (428)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE--------EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 88088899999999999999986698871699998--------7404779987313577898899999871797799728
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC--CHHHHHCCHHHHHHHHHHHH
Q ss_conf 223322345321111001233455432012221--01121000026889999886
Q gi|254780432|r 266 MNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFL--ENVINIAKILFEGLTAIKNR 318 (392)
Q Consensus 266 ~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~--~~~~~~g~~l~~~L~~l~~~ 318 (392)
..+..-..|-..|--+..++..+++.+...++. +.+.+-.+.++.+-+++.++
T Consensus 283 ~~EA~gIPt~eaN~~~l~~t~~~~~~~~~q~~~~~~~~~~E~~~i~~Ev~~i~d~ 337 (428)
T cd00245 283 PDEAHGIPTIEANVAGLKATATVLNMLRGQKFPPSEAIEQEEEIIKAEVKAILDK 337 (428)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8997589988999999999999999873455678631035899999999999999
No 442
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=23.61 E-value=54 Score=13.87 Aligned_cols=150 Identities=18% Similarity=0.196 Sum_probs=67.5
Q ss_pred CCCCHHHHHHHHHHHHH-CCCCC-CCCC--CHHHHHHHHHHHHHCCCCC--CCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 87899999999999973-14506-8757--8189999986520101333--12356555403567776654320013478
Q gi|254780432|r 47 GHSHPELVAILKSQSEK-LWHVS-NLYQ--STQQEIFANHLIHSTFADR--VFFTNSGAESVECAIKTARRYHYMAGKTN 120 (392)
Q Consensus 47 Gh~~p~i~~a~~~q~~~-~~~~~-~~~~--~~~~~~la~~L~~~~~~~~--v~f~~SGseA~e~Aiklar~~~~~~g~t~ 120 (392)
.|..+++.+...++... +-.+. .... .... +.+.+....++ ++.-.+|.--.|-|+|+||.- +..+.+.
T Consensus 18 ky~s~~~~~~ai~aSgaeivTVAlRR~~~~~~~~----~~~l~~i~~~~~~~LPNTAGc~ta~EAvr~A~la-RE~~~t~ 92 (248)
T cd04728 18 KYPSPAIMKEAIEASGAEIVTVALRRVNIGDPGG----ESFLDLLDKSGYTLLPNTAGCRTAEEAVRTARLA-REALGTD 92 (248)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCC----HHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHH-HHHHCCC
T ss_conf 9999999999999968976999986305788885----2689875233866876540116799999999999-9984898
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--C-------CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC----CCC
Q ss_conf 6002343546565432123455321134799--9-------86433322210026887541012332222333----222
Q gi|254780432|r 121 KFRIVTFEGAFHGRTLATISAGGKLQYLEGF--G-------PKIEGFDQAKFCDLQSLKNQISNDTAAILIEP----IQG 187 (392)
Q Consensus 121 r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~--~-------p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Ep----v~g 187 (392)
.|-+ -+-+++.+..+- + ...++|.-.||...|-....-=+++.|..+.| |=+
T Consensus 93 ---~IKL------------EVi~D~~~LlPD~~eTl~Aae~Lv~~GF~VlpY~~~D~v~akrLe~~Gc~avMPlgsPIGS 157 (248)
T cd04728 93 ---WIKL------------EVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDAGCAAVMPLGSPIGS 157 (248)
T ss_pred ---EEEE------------EEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf ---6999------------9817976779886899999999998899897867889999999997495345204564347
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf 2112462101232211022345721310110034444
Q gi|254780432|r 188 EGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392)
Q Consensus 188 ~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392)
.-|. ..+..++-+++ +.++.+|+| .|.|+
T Consensus 158 g~Gl--~n~~~l~~i~e---~~~vPvIVD---AGiG~ 186 (248)
T cd04728 158 GQGL--LNPYNLRIIIE---RADVPVIVD---AGIGT 186 (248)
T ss_pred CCCC--CCHHHHHHHHH---HCCCCEEEE---CCCCC
T ss_conf 9887--99999999998---479988984---79997
No 443
>TIGR02089 TTC tartrate dehydrogenase; InterPro: IPR011829 Tartrate dehydrogenase catalyzes the oxidation of both meso- and (+)-tartrate as well as a D-malate . These enzymes are closely related to the 3-isopropylmalate and isohomocitrate dehydrogenases found in IPR004429 from INTERPRO and IPR011828 from INTERPRO, respectively.; GO: 0009027 tartrate dehydrogenase activity, 0051287 NAD binding.
Probab=23.48 E-value=19 Score=16.86 Aligned_cols=40 Identities=13% Similarity=0.251 Sum_probs=17.7
Q ss_pred CCCCCC------CCCCC-HHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH
Q ss_conf 234532------11110-012334554320122210112100002688999988
Q gi|254780432|r 271 HGSTYG------GNVLA-MVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKN 317 (392)
Q Consensus 271 ~~~T~~------gnpl~-~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~ 317 (392)
|||-+. +||.+ ...|.--||.+=|+++ |..+.+-+++..+
T Consensus 283 HGSAPDIaG~GIANPIg~iWtaa~MleHlGE~ea-------ga~i~~a~E~~t~ 329 (355)
T TIGR02089 283 HGSAPDIAGKGIANPIGAIWTAALMLEHLGEKEA-------GAKILDAIERVTA 329 (355)
T ss_pred CCCCHHHCCCCCCCHHHHHHHHHHHHHHCCHHHH-------HHHHHHHHHHHHH
T ss_conf 8884514057763436899999987641146899-------9999999999871
No 444
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=23.31 E-value=55 Score=13.83 Aligned_cols=48 Identities=4% Similarity=0.132 Sum_probs=31.3
Q ss_pred HHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999996898996268988995589868899999999999999998
Q gi|254780432|r 342 ALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 342 ~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
......|.++|+-+...+...=..--.|++.+++.++++..|-++|-|
T Consensus 19 ar~~~AL~~~gInv~a~~Q~~r~vnvqFVV~~~d~~~Ai~aLH~al~E 66 (66)
T cd04915 19 ARGLAALAEAGIEPIAAHQSMRNVDVQFVVDRDDYDNAIKALHAALVE 66 (66)
T ss_pred HHHHHHHHHCCCCEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHCC
T ss_conf 999999998899789886478503689998279999999999998719
No 445
>PRK04205 hypothetical protein; Provisional
Probab=23.29 E-value=24 Score=16.13 Aligned_cols=28 Identities=29% Similarity=0.708 Sum_probs=16.2
Q ss_pred HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 012322110223457213101100344445553101112454
Q gi|254780432|r 196 EEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVK 237 (392)
Q Consensus 196 ~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~ 237 (392)
..||+.+|++-++ .||||| |++++||.+
T Consensus 161 Rr~lr~vr~i~kd----------~tGFGR----~~f~YfGE~ 188 (222)
T PRK04205 161 RRVLREVRDVHRD----------LTGFGR----FVFQYFGET 188 (222)
T ss_pred HHHHHHHHHHHHH----------HCCCCE----EHHHHHCCC
T ss_conf 9999999988765----------125300----023343566
No 446
>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=23.07 E-value=25 Score=16.03 Aligned_cols=11 Identities=45% Similarity=0.902 Sum_probs=4.9
Q ss_pred CCCCCCCCCCC
Q ss_conf 03444455531
Q gi|254780432|r 219 QTGYGRTGKLF 229 (392)
Q Consensus 219 ~tG~GRtG~~f 229 (392)
-+|+||||+|-
T Consensus 226 SAGvGRTGTFI 236 (302)
T COG5599 226 SAGVGRTGTFI 236 (302)
T ss_pred CCCCCCCCEEE
T ss_conf 26777750355
No 447
>TIGR01455 glmM phosphoglucosamine mutase; InterPro: IPR006352 This family describes GlmM, phosphoglucosamine mutase, also designated MrsA and YhbF in Escherichia coli , UreC in Helicobacter pylori , and femR315 or FemD in Staphlococcus aureus . It converts glucosamine-6-phosphate to glucosamine-1-phosphate as part of the pathway toward UDP-N-acetylglucosamine for peptidoglycan and lipopolysaccharides..
Probab=22.96 E-value=55 Score=13.79 Aligned_cols=97 Identities=18% Similarity=0.253 Sum_probs=58.2
Q ss_pred CHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE--EEEEE-EECCCH---HHHHHHHHHCC-E
Q ss_conf 00123345543201222101121000026889999886797075504640--09998-724998---99999999689-8
Q gi|254780432|r 281 AMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQG--LLIGL-KTVFSP---ALLAAKFRDEC-L 353 (392)
Q Consensus 281 ~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G--l~~~i-e~~~~~---~~~~~~l~~~G-l 353 (392)
+..+|+-+|+.|++.+ .-|.+-+.+ ...+|-.-.+||-.+ -=..+ |.+.=. +...+.|-.+| |
T Consensus 345 GivsALqvl~~m~~~G---------~~LSeL~~~-~~~~PQ~L~NVrv~~r~~k~~~~e~P~v~~A~~~a~~~lg~~GRi 414 (450)
T TIGR01455 345 GIVSALQVLTIMKKSG---------SSLSELASE-LTKYPQVLVNVRVEDRVGKEAAAEAPAVKAAIEDAEAELGGKGRI 414 (450)
T ss_pred HHHHHHHHHHHHHHCC---------CCHHHHHHC-CCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf 9999999999998628---------978999518-742782078888726502474012348999999999984379808
Q ss_pred EEEECC-CCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 996268-98899558986889999999999999999
Q gi|254780432|r 354 LTAPSS-DNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 354 l~~~~~-~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
+++|+| ++.||.+-= --++++++...+.|.+++.
T Consensus 415 llRpSGTEPliRVMVE-a~d~~~v~~~~~~~a~vV~ 449 (450)
T TIGR01455 415 LLRPSGTEPLIRVMVE-AADEELVQQLADAIADVVS 449 (450)
T ss_pred EEECCCCCCCEEEEEE-CCCHHHHHHHHHHHHHHHC
T ss_conf 9707899783168864-4887999999999999843
No 448
>KOG0453 consensus
Probab=22.76 E-value=51 Score=14.01 Aligned_cols=15 Identities=20% Similarity=0.468 Sum_probs=10.0
Q ss_pred CCCCCCCCCCCCCCC
Q ss_conf 565432123455321
Q gi|254780432|r 131 FHGRTLATISAGGKL 145 (392)
Q Consensus 131 yHG~t~~a~s~s~~~ 145 (392)
|||-.+.++|.+|..
T Consensus 263 y~G~Gv~slSctgm~ 277 (778)
T KOG0453 263 YFGPGVNSLSCTGMA 277 (778)
T ss_pred EECCCCCEECCCCCE
T ss_conf 856864401224400
No 449
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=22.27 E-value=57 Score=13.70 Aligned_cols=51 Identities=10% Similarity=0.126 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHCCCCC--CCCCCCCC--CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999986520101333--12356555--403567776654320013478600234354656543
Q gi|254780432|r 76 QEIFANHLIHSTFADR--VFFTNSGA--ESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRT 135 (392)
Q Consensus 76 ~~~la~~L~~~~~~~~--v~f~~SGs--eA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t 135 (392)
..++.++..+..+.++ +++|.||. -+..+|.+|... |- ++-.+.|+|-+|.
T Consensus 50 ~~~l~~~~~~~l~~d~~iVvyC~~~~~~~s~~aA~~L~~~--------Gf-~V~~l~GG~~~W~ 104 (110)
T cd01521 50 HREICENATAKLDKEKLFVVYCDGPGCNGATKAALKLAEL--------GF-PVKEMIGGLDWWK 104 (110)
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHC--------CC-CEEECCCCHHHHH
T ss_conf 7888777897679997189997899864179999999977--------99-7488158899998
No 450
>TIGR02336 TIGR02336 conserved hypothetical protein TIGR02336; InterPro: IPR012711 The function of proteins in this family is unknown. Members are found so far only in a small number of phylogenetically diverse bacteria, including Clostridium perfringens (in the firmicutes), Bifidobacterium longum (in the actinobacteria), and Vibrio vulnificus (in the proteobacteria)..
Probab=22.24 E-value=57 Score=13.69 Aligned_cols=105 Identities=16% Similarity=0.325 Sum_probs=69.4
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC--CCC--CCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCC--CCCC
Q ss_conf 6433322210026887541012332222333--222--211246210123221102234572131011003444--4555
Q gi|254780432|r 154 KIEGFDQAKFCDLQSLKNQISNDTAAILIEP--IQG--EGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYG--RTGK 227 (392)
Q Consensus 154 ~~~~~~~~~~~d~~~l~~~~~~~iAavi~Ep--v~g--~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~G--RtG~ 227 (392)
++-.+.++.|+|+ +++-|+++|- ||+.. +.+ +||..=-.+.....||+..++=|.++=+=| -|..- +-|+
T Consensus 486 mpveVeFISFDDi--le~GId~Di~-VIIN~Gda~tAwsGGd~W~npklv~~~R~wV~~GGgf~GVge-Psa~~rf~~gr 561 (767)
T TIGR02336 486 MPVEVEFISFDDI--LEKGIDEDIK-VIINAGDADTAWSGGDVWDNPKLVEKVRKWVREGGGFVGVGE-PSAIQRFKEGR 561 (767)
T ss_pred CCEEEEEECHHHH--HHCCCCCCCC-EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCC-CCHHHHHHCCC
T ss_conf 8147887316788--7357985345-787478876423378513685487888899735981785477-10356875388
Q ss_pred CCC------C----------CCC--CCCCCEE----ECCC-----CC-CCCC--CCCCCCCCCCC
Q ss_conf 310------1----------112--4545302----1034-----44-4443--44321000111
Q gi|254780432|r 228 LFA------Y----------EWA--NVKPDIM----TIAK-----GM-GGGF--PIGACLATNEV 262 (392)
Q Consensus 228 ~f~------~----------e~~--gi~PDi~----~~gK-----~l-~gG~--P~sav~~~~~i 262 (392)
||= . ..+ .|.||=- +=+| +- ..|| |+|++-+.+.|
T Consensus 562 fFQLaDV~GvdkE~~~tls~~ky~~~~~phHfit~~i~~~PaareaWeqaGyriPlsGCGGGqsi 626 (767)
T TIGR02336 562 FFQLADVLGVDKETSLTLSRVKYPLEIEPHHFITEEIQEDPAAREAWEQAGYRIPLSGCGGGQSI 626 (767)
T ss_pred CEEEEEEEEEECCCCEECCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCC
T ss_conf 06221241000000011130103776688731030026782035678746844320246887532
No 451
>cd01125 repA Hexameric Replicative Helicase RepA. RepA is encoded by a plasmid, which is found in most Gram negative bacteria. RepA is a 5'-3' DNA helicase which can utilize ATP, GTP and CTP to a lesser extent.
Probab=22.01 E-value=58 Score=13.66 Aligned_cols=52 Identities=17% Similarity=0.386 Sum_probs=30.7
Q ss_pred HHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCC----CHHHHHHHHCCCCCCCCEEEE
Q ss_conf 0268875410-123322223332222112462----101232211022345721310
Q gi|254780432|r 164 CDLQSLKNQI-SNDTAAILIEPIQGEGGVRKV----PEEFLQQLRKICDDIDALLIF 215 (392)
Q Consensus 164 ~d~~~l~~~~-~~~iAavi~Epv~g~~G~~~~----~~~~l~~l~~lc~~~g~llI~ 215 (392)
..++.+.+.+ ..++-.||++|++...|.-.- =..|++.++.+|+++|+-+++
T Consensus 98 ~~~~~i~~~~~~~~~~LVViDpL~~~~~~dENd~~~m~~~i~~l~~ia~~tg~aVl~ 154 (239)
T cd01125 98 PEFERIIEQLLIRRIDLVVIDPLVSFHGVSENDNGAMDAVIKALRRIAAQTGAAILL 154 (239)
T ss_pred HHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 899999999745899899983817748999788999999999999999971999999
No 452
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=21.75 E-value=59 Score=13.63 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=21.7
Q ss_pred CCCCCCCCCCCCCCC-----CCCCC-CCCEEECCCC
Q ss_conf 100344445553101-----11245-4530210344
Q gi|254780432|r 217 EVQTGYGRTGKLFAY-----EWANV-KPDIMTIAKG 246 (392)
Q Consensus 217 EV~tG~GRtG~~f~~-----e~~gi-~PDi~~~gK~ 246 (392)
++.+|--|-|+|=|- ..|++ .||..+||+.
T Consensus 116 ~~LeGa~RPGHF~GV~TVV~KLFniv~Pd~AyFGeK 151 (285)
T COG0414 116 DELEGASRPGHFRGVATVVTKLFNIVQPDRAYFGEK 151 (285)
T ss_pred CCCCCCCCCCCCCEEEEHHHHHHCCCCCCEEEECCC
T ss_conf 200579888764516567775546248883355530
No 453
>cd02812 PcrB_like PcrB_like proteins. One member of this family, a protein from Archaeoglobus fulgidus, has been characterized as a (S)-3-O-geranylgeranylglyceryl phosphate synthase (AfGGGPS). AfGGGPS catalyzes the formation of an ether linkage between sn-glycerol-1-phosphate (G1P) and geranylgeranyl diphosphate (GGPP), the committed step in archaeal lipid biosynthesis. Therefore, it has been proposed that PcrB-like proteins are either prenyltransferases or are involved in lipoteichoic acid biosynthesis although the exact function is still unknown.
Probab=21.66 E-value=59 Score=13.62 Aligned_cols=33 Identities=21% Similarity=0.387 Sum_probs=15.7
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCH----HHHHHHHHHH
Q ss_conf 99998652010133312356555403----5677766543
Q gi|254780432|r 77 EIFANHLIHSTFADRVFFTNSGAESV----ECAIKTARRY 112 (392)
Q Consensus 77 ~~la~~L~~~~~~~~v~f~~SGseA~----e~Aiklar~~ 112 (392)
.+++ +++...+.|-++ .+||..+ |..+++.++.
T Consensus 15 ~~l~-~~~~~sgtDai~--VGGS~~~~~~~~~~v~~ik~~ 51 (219)
T cd02812 15 EEIA-KLAEESGTDAIM--VGGSDGVSSTLDNVVRLIKRI 51 (219)
T ss_pred HHHH-HHHHHHCCCEEE--ECCCCCCHHHHHHHHHHHHHH
T ss_conf 9999-999976999999--937557447799999999973
No 454
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit; InterPro: IPR006275 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates , . CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate . The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain . CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites . The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein . The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP . There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia . CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains . This entry represents glutamine-dependent CPSase (6.3.5.5 from EC) from prokaryotes and eukaryotes (CPSase II). ; GO: 0004086 carbamoyl-phosphate synthase activity, 0006807 nitrogen compound metabolic process.
Probab=21.60 E-value=59 Score=13.61 Aligned_cols=20 Identities=20% Similarity=0.562 Sum_probs=14.5
Q ss_pred HHHCCCCCCCCEEEECCCCC
Q ss_conf 21102234572131011003
Q gi|254780432|r 201 QLRKICDDIDALLIFDEVQT 220 (392)
Q Consensus 201 ~l~~lc~~~g~llI~DEV~t 220 (392)
.+|++.++.|++=++=.|=|
T Consensus 524 ~vR~~R~~~gi~Pv~K~vDT 543 (1089)
T TIGR01369 524 EVRKLRKELGIIPVYKRVDT 543 (1089)
T ss_pred HHHHHHHHCCCEEEEEEEEC
T ss_conf 99999984697477877523
No 455
>KOG3040 consensus
Probab=21.42 E-value=41 Score=14.63 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=17.8
Q ss_pred CCCHHHHHHHHH---HHHHCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 789999999999---997314506875781899999865201
Q gi|254780432|r 48 HSHPELVAILKS---QSEKLWHVSNLYQSTQQEIFANHLIHS 86 (392)
Q Consensus 48 h~~p~i~~a~~~---q~~~~~~~~~~~~~~~~~~la~~L~~~ 86 (392)
..-|.-++|++. |--+.-++++. +-+....|.++|+..
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNt-tk~Sk~~l~~rL~rl 63 (262)
T KOG3040 23 AAVPGAVEALKRLRDQHVKVKFVTNT-TKESKRNLHERLQRL 63 (262)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEECC-CCHHHHHHHHHHHHH
T ss_conf 66877799999997467269997567-602689999999981
No 456
>pfam03853 YjeF_N YjeF-related protein N-terminus.
Probab=21.33 E-value=60 Score=13.57 Aligned_cols=63 Identities=22% Similarity=0.365 Sum_probs=43.6
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCC-CCCCCCCCCCCCCCCCCEE-ECC
Q ss_conf 222233322221124621012322110223457213101100344-4455531011124545302-103
Q gi|254780432|r 178 AAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGY-GRTGKLFAYEWANVKPDIM-TIA 244 (392)
Q Consensus 178 Aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~-GRtG~~f~~e~~gi~PDi~-~~g 244 (392)
+.+|++-++|.| ...+.++.+..+-+...+.+...|+=+|.||+ .-||.... .-|+||.+ ||+
T Consensus 101 ~d~iVDal~G~G-l~~~l~~~~~~~i~~iN~~~~~visiDiPSGl~~dtG~~~~---~~v~Ad~Tvtf~ 165 (170)
T pfam03853 101 ADLIIDALFGTG-LSRPLRGEYAELIEWINASKAPVLAVDIPSGLDADTGAVLG---AAVKADYTVTFG 165 (170)
T ss_pred CCEEEEEEEECC-CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC---CEEECCEEEECC
T ss_conf 628997435236-79889889999999997389967997378875677888389---707189889804
No 457
>COG5011 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.28 E-value=60 Score=13.57 Aligned_cols=42 Identities=19% Similarity=0.370 Sum_probs=28.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 31235655540356777665432001347860023435465654
Q gi|254780432|r 91 RVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGR 134 (392)
Q Consensus 91 ~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~ 134 (392)
+++|.-.|.-|--+-+-+.|...+...+++=+ |+|++|||-.
T Consensus 4 ~v~f~Kqg~m~fvShLdlmRlidR~iRRAglp--iayT~GFhP~ 45 (228)
T COG5011 4 RVWFGKQGNMAFVSHLDLMRLIDRTIRRAGLP--IAYTGGFHPH 45 (228)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC--EEECCCCCCC
T ss_conf 99974787356888889999999998864985--3543788999
No 458
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=21.05 E-value=38 Score=14.89 Aligned_cols=24 Identities=29% Similarity=0.427 Sum_probs=22.0
Q ss_pred CCHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 210123221102234572131011
Q gi|254780432|r 194 VPEEFLQQLRKICDDIDALLIFDE 217 (392)
Q Consensus 194 ~~~~~l~~l~~lc~~~g~llI~DE 217 (392)
.|++|+.++-++|++.|+-+|+|-
T Consensus 143 ~~~d~y~~li~~~~~~g~~vilD~ 166 (310)
T COG1105 143 VPPDAYAELIRILRQQGAKVILDT 166 (310)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 997999999999986598399979
No 459
>pfam06153 DUF970 Protein of unknown function (DUF970). Family of uncharacterized bacterial proteins.
Probab=20.94 E-value=61 Score=13.52 Aligned_cols=56 Identities=13% Similarity=0.227 Sum_probs=29.7
Q ss_pred EEEEEEECCCHHHHHHHHHHCCEEEE---ECC-----CCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 09998724998999999996898996---268-----988995589868899999999999999998
Q gi|254780432|r 331 LLIGLKTVFSPALLAAKFRDECLLTA---PSS-----DNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 331 l~~~ie~~~~~~~~~~~l~~~Gll~~---~~~-----~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
|+++|--..+...+...|.++|..+- ..| +|+--+ .-+.++++|+++++|++.+.+
T Consensus 3 LiiAIVqd~Da~~l~~~L~~~~~~~TkLaStGGFLr~GNtTll---iGvede~V~~vl~iIk~~c~~ 66 (109)
T pfam06153 3 LVIAIVQDQDANRLSDALTEKGFRATKLASTGGFLKAGNTTLL---IGVEDERVDDVLSIIKENCKT 66 (109)
T ss_pred EEEEEEECCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEE---EEECHHHHHHHHHHHHHHHCC
T ss_conf 8999973211799999999889549998746662226976999---984288889999999986127
No 460
>PRK09279 pyruvate phosphate dikinase; Provisional
Probab=20.86 E-value=61 Score=13.51 Aligned_cols=30 Identities=27% Similarity=0.225 Sum_probs=25.2
Q ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 889955898688999999999999999985
Q gi|254780432|r 361 NVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 361 ~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
..++++-||+-|.+|++++.++|++...++
T Consensus 700 ~~~~IMiP~v~t~~El~~~~~~i~~~~~~~ 729 (875)
T PRK09279 700 VVPEIMIPLVGTVKELKLVKAIIDAVAEEV 729 (875)
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 866999667798999999999999999999
No 461
>TIGR02085 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransferase RumB; InterPro: IPR011825 This family consists of RNA methyltransferases designated RumB, formerly YbjF. Members act on 23S rRNA U747 and the equivalent position in other proteobacterial species. This family is homologous to the other 23S rRNA methyltransferase RumA and to the tRNA methyltransferase TrmA .; GO: 0016436 rRNA (uridine) methyltransferase activity, 0016070 RNA metabolic process.
Probab=20.84 E-value=33 Score=15.28 Aligned_cols=46 Identities=20% Similarity=0.253 Sum_probs=32.1
Q ss_pred HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC---CCCCCCCCCEEECC
Q ss_conf 01232211022345721310110034444555310---11124545302103
Q gi|254780432|r 196 EEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFA---YEWANVKPDIMTIA 244 (392)
Q Consensus 196 ~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~---~e~~gi~PDi~~~g 244 (392)
...+...|++.+++.+.-+=| -.||.|--|=-.| .|.|+ ||+-..|
T Consensus 223 ~~LYATAr~WV~e~~~~~mWD-LFCGVGGFgLHCAkalqekw~--p~~~lTG 271 (386)
T TIGR02085 223 AQLYATARQWVRELPVKQMWD-LFCGVGGFGLHCAKALQEKWG--PDTQLTG 271 (386)
T ss_pred HHHHHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHCC--CCEEEEE
T ss_conf 887688999997457110320-104654127899898764158--9704431
No 462
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=20.84 E-value=61 Score=13.51 Aligned_cols=167 Identities=16% Similarity=0.145 Sum_probs=90.7
Q ss_pred CEEEECCCCCCCCCCCCCCCCCCCCC-CCCEEECC--CCCCC-CCCCCCCCCCCCCCCCCCCC------------CCCCC
Q ss_conf 21310110034444555310111245-45302103--44444-43443210001112222233------------22345
Q gi|254780432|r 211 ALLIFDEVQTGYGRTGKLFAYEWANV-KPDIMTIA--KGMGG-GFPIGACLATNEVAACMNQG------------SHGST 274 (392)
Q Consensus 211 ~llI~DEV~tG~GRtG~~f~~e~~gi-~PDi~~~g--K~l~g-G~P~sav~~~~~i~~~~~~~------------~~~~T 274 (392)
.++|+|=.-.=|+ ...|+ +=|++..| |.||+ | ++.++.|+++.+..... ..++|
T Consensus 171 ~~~v~D~SS~ils--------r~iDvsk~dviyagaQKnlGpaG--ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~ 240 (365)
T COG1932 171 GLLVADASSAILS--------RPIDVSKYDVIYAGAQKNLGPAG--LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSM 240 (365)
T ss_pred CEEEEECCCHHHC--------CCCCHHHCCEEEEEHHHCCCCCC--EEEEEECHHHHHCCCCCCCCHHHHCHHHHCCCCC
T ss_conf 6089965627755--------77775671358876211257655--3999986899701135689617643121104884
Q ss_pred CCCCCCCHH-HHHHHHHHHHCCC----CCCHHHHHCCHHHHHHHHHHHHCCCEEE-EECCCEEEE-EEEECCC--HHHHH
Q ss_conf 321111001-2334554320122----2101121000026889999886797075-504640099-9872499--89999
Q gi|254780432|r 275 YGGNVLAMV-LGEKVLNIIQSDG----FLENVINIAKILFEGLTAIKNRFPNMFL-EVRGQGLLI-GLKTVFS--PALLA 345 (392)
Q Consensus 275 ~~gnpl~~a-aa~a~L~~l~~~~----l~~~~~~~g~~l~~~L~~l~~~~~~~v~-~vRG~Gl~~-~ie~~~~--~~~~~ 345 (392)
|+-.|.-|. ...-+++-+++.+ +.+|.++..+.|.+-+++- .-+.+.+. +.| -.|. .|.++.+ ++.+.
T Consensus 241 yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~R--S~mnV~f~~~~~~ld~~fv 317 (365)
T COG1932 241 YNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANR--SRMNVTFTLVDAELDKGFV 317 (365)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHC--CCEEEEEECCCHHHHHHHH
T ss_conf 2784899999999999999974999999998899899999998727-753344552121--5326898727377779999
Q ss_pred HHHHHCCEEEE--ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99996898996--2689889955898688999999999999999985
Q gi|254780432|r 346 AKFRDECLLTA--PSSDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 346 ~~l~~~Gll~~--~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
+.+.++|+... +.....+|..-==.|+-+++..+++-++....+.
T Consensus 318 ~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 318 AEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred HHHHHCCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99997377410266477861665435778899999999999999860
No 463
>pfam02669 KdpC K+-transporting ATPase, c chain. This family consists of K+-transporting ATPase, c chain, KdpC. KdpC forms strong interactions with the KdpA subunit, serving to assemble and stabilize the Kdp complex. It has been suggested that KdpC could be one of the connecting links between the energy providing subunit KdpB and the K+-transporting subunit KdpA. The K+ transport system actively transports K+ ions via ATP hydrolysis.
Probab=20.70 E-value=61 Score=13.49 Aligned_cols=19 Identities=21% Similarity=0.424 Sum_probs=8.5
Q ss_pred HHCCCCCCHHHHHHHHHHH
Q ss_conf 4357878999999999999
Q gi|254780432|r 43 VNSLGHSHPELVAILKSQS 61 (392)
Q Consensus 43 ~~~lGh~~p~i~~a~~~q~ 61 (392)
..|+|-.||++.+.+++-+
T Consensus 84 gSNl~psnp~l~~~v~~r~ 102 (188)
T pfam02669 84 GSNLAPSNPDLLSRIAARV 102 (188)
T ss_pred CCCCCCCCHHHHHHHHHHH
T ss_conf 6577999999999999999
No 464
>PRK05935 biotin--protein ligase; Provisional
Probab=20.48 E-value=62 Score=13.46 Aligned_cols=39 Identities=18% Similarity=0.171 Sum_probs=25.0
Q ss_pred CHHHHHHHHCCCCCCC-CEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 1012322110223457-21310110034444555310111
Q gi|254780432|r 195 PEEFLQQLRKICDDID-ALLIFDEVQTGYGRTGKLFAYEW 233 (392)
Q Consensus 195 ~~~~l~~l~~lc~~~g-~llI~DEV~tG~GRtG~~f~~e~ 233 (392)
..+|++++.+.-...+ .++++|+=..|-||.|+-|-+..
T Consensus 14 TN~~ak~~~~~~~~~~~~vv~A~~QT~GRGR~gr~W~S~~ 53 (190)
T PRK05935 14 TNTTAKQGMHLWDPYALTVISTREQTAGKGKFGKSWHSSD 53 (190)
T ss_pred HHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCCEEECCC
T ss_conf 8999999997379989899998811048987998656699
No 465
>COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=20.37 E-value=62 Score=13.44 Aligned_cols=12 Identities=8% Similarity=-0.108 Sum_probs=4.4
Q ss_pred CCCHHHHHHHHH
Q ss_conf 110012334554
Q gi|254780432|r 279 VLAMVLGEKVLN 290 (392)
Q Consensus 279 pl~~aaa~a~L~ 290 (392)
|-+..+|.+..+
T Consensus 325 ~~aV~~A~~NA~ 336 (432)
T COG2265 325 PEAVEAAQENAA 336 (432)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 466
>KOG2470 consensus
Probab=20.35 E-value=62 Score=13.46 Aligned_cols=14 Identities=14% Similarity=0.335 Sum_probs=8.8
Q ss_pred CCCHHHHHHHHHHH
Q ss_conf 78999999999999
Q gi|254780432|r 48 HSHPELVAILKSQS 61 (392)
Q Consensus 48 h~~p~i~~a~~~q~ 61 (392)
|=|+.|-++.++-+
T Consensus 82 hlh~lif~~ard~l 95 (510)
T KOG2470 82 HLHSLIFDLARDHL 95 (510)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 78799999999998
No 467
>PRK09939 putative oxidoreductase; Provisional
Probab=20.07 E-value=63 Score=13.40 Aligned_cols=32 Identities=13% Similarity=0.213 Sum_probs=14.5
Q ss_pred EECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 967997646410226743578789999999999997
Q gi|254780432|r 27 FSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSE 62 (392)
Q Consensus 27 ~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~ 62 (392)
.|.+..+.|=+++ .|-|-|||++...++++.+
T Consensus 204 ~D~~~aD~I~viG----~Np~tnHPrml~~L~~a~~ 235 (759)
T PRK09939 204 EDFEKCDLVICIG----HNPGTNHPRMLTSLRALVK 235 (759)
T ss_pred HHHHHCCEEEEEC----CCCCCCCHHHHHHHHHHHH
T ss_conf 8896498899984----5857458899999999998
Done!