HHsearch alignment for GI: 254780432 and conserved domain: pfam00464
>pfam00464 SHMT Serine hydroxymethyltransferase.
Probab=97.93 E-value=0.0011 Score=44.59 Aligned_cols=275 Identities=17% Similarity=0.189 Sum_probs=130.1
Q ss_pred HHHHHH-HHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC--C-CC--CCCCCCCCCCCCCCCCCCC
Q ss_conf 999865-20101333123-5655540356777665432001347860023435--4-65--6543212345532113479
Q gi|254780432|r 78 IFANHL-IHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFE--G-AF--HGRTLATISAGGKLQYLEG 150 (392)
Q Consensus 78 ~la~~L-~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~--~-~y--HG~t~~a~s~s~~~~~~~~ 150 (392)
T Consensus 69 ~la~~rak~lF~a~~anVqp~SGs~An~av~~al-------l~PG-D~il~l~l~~GGHltHg~---~~~~~g~~~~~~~ 137 (380)
T pfam00464 69 TLAQDRAKELFGLDGVNVQPLSGSQANLAVYTAL-------LNPG-DRIMGLDLPHGGHLTHGY---PVNFSGKFFESMP 137 (380)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH-------HCCC-CEEEECCCCCCCCCCCCC---CCCEECCEEEEEE
T ss_conf 9999999998399763517787699999999998-------3799-989953677775456798---6562011467787
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC-CCCCCCCCCC
Q ss_conf 998643332221002688754101-23322223332222112462101232211022345721310110-0344445553
Q gi|254780432|r 151 FGPKIEGFDQAKFCDLQSLKNQIS-NDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV-QTGYGRTGKL 228 (392)
Q Consensus 151 ~~p~~~~~~~~~~~d~~~l~~~~~-~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV-~tG~GRtG~~ 228 (392)
T Consensus 138 Y~-~d~~~~~I---D~d~l~~~a~~~kPklIi~G~-----Say~r~~d-~~~~reIad~vgA~l~~D~aH~~GLIA~g~- 206 (380)
T pfam00464 138 YG-VDPDTGLI---DYDQLEKNAKLFKPKLIVAGT-----SAYSRLID-YARFREIADEVGAYLMVDMAHIAGLVAAGV- 206 (380)
T ss_pred CC-CCCCCCCC---CHHHHHHHHHHCCCCEEEECC-----CCCCCCCC-HHHHHHHHHHCCCEEEEEHHHHHHHHHCCC-
T ss_conf 43-46454866---899999999970998899874-----00436448-899999997509889986377777774243-
Q ss_pred CCCCCCCCCCCEEECC--CCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHCC---CCC
Q ss_conf 1011124545302103--4444443443210001----11222223322345321111001233-455432012---221
Q gi|254780432|r 229 FAYEWANVKPDIMTIA--KGMGGGFPIGACLATN----EVAACMNQGSHGSTYGGNVLAMVLGE-KVLNIIQSD---GFL 298 (392)
Q Consensus 229 f~~e~~gi~PDi~~~g--K~l~gG~P~sav~~~~----~i~~~~~~~~~~~T~~gnpl~~aaa~-a~L~~l~~~---~l~ 298 (392)
T Consensus 207 ~p~-Pl~-~ADvvt~tTHKTlrG--PrGGiIl~~~~~~e~~~kId~avFPg~qggp~~h~iAa~Aval~Ea~~~~f~~Ya 282 (380)
T pfam00464 207 IPS-PFP-YAHVVTTTTHKTLRG--PRGGMIFFREILYELEKKINSAVFPGLQGGPLNHVIAAKAVALKQALTPEFKVYQ 282 (380)
T ss_pred CCC-CCC-CCEEEECCCCCCCCC--CCCEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_conf 799-546-665785354566789--9851798378379999997140488766770065799999999998485299999
Q ss_pred CHHHHHCCHHHHHHHHHHHHCCCEEEEECCCE-EEEEEEEC---CCHHHHHHHHHHCCEEEEEC----------CCCEEE
Q ss_conf 01121000026889999886797075504640-09998724---99899999999689899626----------898899
Q gi|254780432|r 299 ENVINIAKILFEGLTAIKNRFPNMFLEVRGQG-LLIGLKTV---FSPALLAAKFRDECLLTAPS----------SDNVVR 364 (392)
Q Consensus 299 ~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~G-l~~~ie~~---~~~~~~~~~l~~~Gll~~~~----------~~~~ir 364 (392)
T Consensus 283 ~qVv~NAk~La~~L~~~--G~-~vv~g--gTd~H~vlvdl~~~g~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiR 357 (380)
T pfam00464 283 QQVLKNAKALAEALKER--GY-KLVSG--GTDNHLVLVDLRPKGLDGKRAEKALERANITANKNTIPGDPKSPFVTSGLR 357 (380)
T ss_pred HHHHHHHHHHHHHHHHC--CC-EECCC--CCCCCEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCE
T ss_conf 99999999999999978--88-35779--998768999776669999999999997692878885989999998888426
Q ss_pred ECCC-CC---CCHHHHHHHHHHH
Q ss_conf 5589-86---8899999999999
Q gi|254780432|r 365 ILPP-LT---ITAEEIHEGLERI 383 (392)
Q Consensus 365 l~Pp-l~---it~~eid~~i~~l 383 (392)
T Consensus 358 iGt~~~T~rG~~e~em~~ia~~I 380 (380)
T pfam00464 358 LGTPALTSRGFGEADFEEVAGYI 380 (380)
T ss_pred ECCHHHHHCCCCHHHHHHHHHHC
T ss_conf 57778983899889999999659