HHsearch alignment for GI: 254780432 and conserved domain: pfam01276
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=98.01 E-value=0.00011 Score=51.16 Aligned_cols=284 Identities=11% Similarity=0.133 Sum_probs=131.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHH-HHCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 145068757818999998652-0101333123565554-03567776654320013478600234354656543212345
Q gi|254780432|r 64 LWHVSNLYQSTQQEIFANHLI-HSTFADRVFFTNSGAE-SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISA 141 (392)
Q Consensus 64 ~~~~~~~~~~~~~~~la~~L~-~~~~~~~v~f~~SGse-A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~ 141 (392)
T Consensus 55 ~~~lD~L~~p~g~I~eAq~~aA~~fga~~t~flvnGsT~g~~a~i~a~-------~~~Gd-~Vlv~RN-~HkSv~~al~l 125 (417)
T pfam01276 55 DVELGDLLDHSGPIKEAQKYAARVFGADKSYFVVNGTSGANKTVGMAV-------CTPGD-TVLIDRN-CHKSIHHALMM 125 (417)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH-------CCCCC-EEEEECC-CHHHHHHHHHH
T ss_conf 357778778763999999999998399936998468309999999974-------38999-8997164-18999999998
Q ss_pred CC-CCCCCCCCC-C--CCCCCC--CCCCHHHHHHHHHCCCCCC---CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE
Q ss_conf 53-211347999-8--643332--2210026887541012332---2223332222112462101232211022345721
Q gi|254780432|r 142 GG-KLQYLEGFG-P--KIEGFD--QAKFCDLQSLKNQISNDTA---AILIEPIQGEGGVRKVPEEFLQQLRKICDDIDAL 212 (392)
Q Consensus 142 s~-~~~~~~~~~-p--~~~~~~--~~~~~d~~~l~~~~~~~iA---avi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~l 212 (392)
T Consensus 126 ~g~~Pvyl~p~~~~~gi~~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~PtY--~G~~~d----i~~i~~~~h~~~~~ 199 (417)
T pfam01276 126 SGATPVYLEPTRNAYGIIGGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGTY--DGTIYN----AKEIVDTLGHLSDY 199 (417)
T ss_pred CCCEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCC--CEEEEC----HHHHHHHHHHCCCE
T ss_conf 698589953642434661588825459999999998587656850899989998--706528----99999998633987
Q ss_pred EEECCCCCCCCCCCCCCCCCC-----CCCCCC-------EEE--CCCCCCCCCCCCCCC-CCCC-CCC--CCCCC-CCCC
Q ss_conf 310110034444555310111-----245453-------021--034444443443210-0011-122--22233-2234
Q gi|254780432|r 213 LIFDEVQTGYGRTGKLFAYEW-----ANVKPD-------IMT--IAKGMGGGFPIGACL-ATNE-VAA--CMNQG-SHGS 273 (392)
Q Consensus 213 lI~DEV~tG~GRtG~~f~~e~-----~gi~PD-------i~~--~gK~l~gG~P~sav~-~~~~-i~~--~~~~~-~~~~ 273 (392)
T Consensus 200 llvDEA------hGah~~F~plp~~a~~~gad~~~~~~~~vvqS~HKtL~-altQ~s~Lh~~~~~~~~~~~~~~~l~~~q 272 (417)
T pfam01276 200 ILFDSA------WVGYEQFIPIYADASPMGGDNVNDPGIIVTQSVHKLLA-AFSQASQIHKKDSHIVNHKRFNEAFMMHT 272 (417)
T ss_pred EEEECC------CCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEHHHCCC-CCCHHHHHHHCCCCCCCHHHHHHHHHHHC
T ss_conf 999788------75202468783346656788666772279861111354-30434321216787789999999999773
Q ss_pred CCCCCCC---CHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHC------CCEEEEEC------CC---E-----
Q ss_conf 5321111---001233455432012221011210000268899998867------97075504------64---0-----
Q gi|254780432|r 274 TYGGNVL---AMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRF------PNMFLEVR------GQ---G----- 330 (392)
Q Consensus 274 T~~gnpl---~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~------~~~v~~vR------G~---G----- 330 (392)
T Consensus 273 TTSPsY~lmASLD~ar~~m~~~~G~~l~~~~i~~a~~~R~~i~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~hg~~~~~ 352 (417)
T pfam01276 273 STSPFYPIVASLDVAAAMMEGNSGRRLWQESLERAIEFRKEIKTLNDGEFFRPWNPEIVDGKECWPFHPGEKWHGFEGYD 352 (417)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCC
T ss_conf 88748999999999999975355499999999999999999986457852203671004771010247653213555555
Q ss_pred ---E-----EEEE------------EECCCHHHHHHHHHHCCEEEEECCCCEEEECCCC
Q ss_conf ---0-----9998------------7249989999999968989962689889955898
Q gi|254780432|r 331 ---L-----LIGL------------KTVFSPALLAAKFRDECLLTAPSSDNVVRILPPL 369 (392)
Q Consensus 331 ---l-----~~~i------------e~~~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl 369 (392)
T Consensus 353 ~~~~~lDptKltI~t~g~~~~g~~~~~GisG~~v~~~Lre~gI~~E~~d~~~vL~l~s~ 411 (417)
T pfam01276 353 DNQYFLDPIKLTILTPGIDETGEYEEFGVPATIVAKYLREHGIVPEKTDLNNILFLFTP 411 (417)
T ss_pred CCCCCCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHCCCEEEECCCCCEEEEECC
T ss_conf 55425778569998078687763332397799999999986988986688828999736