RPSBLAST alignment for GI: 254780432 and conserved domain: TIGR03246
>gnl|CDD|132290 TIGR03246, arg_catab_astC, succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason. Length = 397
Score = 386 bits (993), Expect = e-108
Identities = 175/392 (44%), Positives = 241/392 (61%), Gaps = 17/392 (4%)
Query: 4 NDFLFNTYDQSDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEK 63
+ + Y + +G+G+ ++ + G ++DFA GIAVN+LGH+HPELV L Q++K
Sbjct: 7 DQVMVPNYAPAPFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADK 66
Query: 64 LWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFR 123
LWH+ N Y + A L+ +TFAD+VFF NSGAE+ E A+K ARRY +K
Sbjct: 67 LWHIGNGYTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSE 126
Query: 124 IVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIE 183
IV F+ +FHGRTL T+S GG+ +Y +GF P G A + DL + K IS+ T A+++E
Sbjct: 127 IVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKTCAVIVE 186
Query: 184 PIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTI 243
PIQGEGGV FL+ LR++CD +ALLIFDEVQTG GRTG+L+AY V PDI+T
Sbjct: 187 PIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTS 246
Query: 244 AKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVIN 303
AK +GGGFPIGA L T E+AA + G+HG+TYGGN LA + KVL+++ + L V
Sbjct: 247 AKALGGGFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQ 306
Query: 304 IAKILFEGLTAIKNRFPNMFLEVRGQGLLIGL----------KTVFSPALLAAKFRDECL 353
+ +GL I R+ N+F E+RG+GLLIG K + A +E +
Sbjct: 307 RHDLFVDGLEKINARY-NVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAA------EEGV 359
Query: 354 LTAPSSDNVVRILPPLTITAEEIHEGLERIER 385
+ + NVVR P L I+ ++I EGL R ER
Sbjct: 360 IALIAGPNVVRFAPSLVISDDDIDEGLARFER 391