HHsearch alignment for GI: 254780434 and conserved domain: CHL00200
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional.
Probab=98.49 E-value=4.8e-05 Score=53.78 Aligned_cols=210 Identities=23% Similarity=0.211 Sum_probs=110.4
Q ss_pred ECCC-CCC--CHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHH--CC
Q ss_conf 5346-888--677988874036752410200136878998862688425554100002477777889998764100--01
Q gi|254780434|r 60 MAAG-YDK--NAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVFSRLSKIQP--TS 134 (362)
Q Consensus 60 lAaG-~dk--~~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~~~l~~~~~--~~ 134 (362)
T Consensus 21 ~taG~P~~e~s~~~~~~l~~~GaDiiElGiPfSDP~AD--GpvIq-~A~~~AL~~G~-----~~~~~~~~v~~~r~~~~~ 92 (263)
T CHL00200 21 ITAGDPDIVITKKALKILDKKGADIIELGIPYSDPLAD--GPIIQ-EASNRALKQGI-----NLNKILSILSEVNGEIKA 92 (263)
T ss_pred ECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC--CHHHH-HHHHHHHHCCC-----CHHHHHHHHHHHHHCCCC
T ss_conf 70738987899999999997699999978988886665--89999-99999997798-----777899999998606799
Q ss_pred CCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 21000110454246788776555420675526983033365322110000234321111224445565531268851786
Q gi|254780434|r 135 PIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFL 214 (362)
Q Consensus 135 pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~v 214 (362)
T Consensus 93 PivlMtY~N~i~~yG~e~F~~~~~~~G--vdGlIi----pDLP-------~eE~~~~~~~~~----------~~gl~~I~ 149 (263)
T CHL00200 93 PIVIFTYYNPVLHYGINKFIKKISQAG--VKGLII----PDLP-------YEESDYLISVCN----------LYNIELIL 149 (263)
T ss_pred CEEEEEEHHHHHHCCHHHHHHHHHHCC--CCEEEC----CCCC-------HHHHHHHHHHHH----------HCCCCEEE
T ss_conf 889986206888738899999999849--986874----7999-------788899999998----------55862166
Q ss_pred ECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 50577774888999998764498299980665553234577544632211356454246899999997408974899967
Q gi|254780434|r 215 KISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTG 294 (362)
Q Consensus 215 KLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~G 294 (362)
T Consensus 150 lvaPtt~~~Ri~~i~~~a-----~GFiY~vs---~~GvTG~~----------~~~~~~l~~~i~~ik~~t--~~Pv-~vG 208 (263)
T CHL00200 150 LIAPTSSKSRIQKIARAA-----PGCIYLVS---TTGVTGLK----------TELDKKLKKLIETIKKMT--NKPI-ILG 208 (263)
T ss_pred EECCCCCHHHHHHHHHHC-----CCCEEEEE---CCCCCCCC----------CCCHHHHHHHHHHHHHHC--CCCE-EEE
T ss_conf 647899699999999728-----98089853---36556875----------445187999999999736--9984-873
Q ss_pred -CCCCHHHHHHHHHCCCCEEEECHHHHC
Q ss_conf -889999999999839997545278770
Q gi|254780434|r 295 -GISSTKDALDKIMAGANLIQLYSAMIY 321 (362)
Q Consensus 295 -GI~s~~Da~e~l~aGAs~VQi~Tali~ 321 (362)
T Consensus 209 FGIs~~e~v~~~~~~~aDGvIVGSaiV~ 236 (263)
T CHL00200 209 FGISTSEQIKQIKGWNINGIVIGSACVQ 236 (263)
T ss_pred CCCCCHHHHHHHHHCCCCEEEECHHHHH
T ss_conf 5879999999997459999998789999