HHsearch alignment for GI: 254780434 and conserved domain: COG0167
>COG0167 PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism].
Probab=100.00 E-value=0 Score=606.80 Aligned_cols=300 Identities=40% Similarity=0.643 Sum_probs=280.1
Q ss_pred CCEEEECCEECCCCEEECCCCC-CCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHH
Q ss_conf 3116888733599748534688-867798887403675241020013687899886268842555410000247777788
Q gi|254780434|r 44 RLNTKVAGISLSNPLGMAAGYD-KNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHT 122 (362)
Q Consensus 44 ~L~~~~~Gl~~~nPiglAaG~d-k~~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~ 122 (362)
T Consensus 1 ~l~~~~~Gl~f~NPl~lAaG~~~~~~~~~~~~~~~g~G~i~~ktvt~~pq~Gnp~PR~~~l~~~~~~iN~mG~~N~G~~~ 80 (310)
T COG0167 1 DLSTEILGLKFPNPLGLAAGFDGKNGEELDALAALGFGAIVTKTVTPEPQEGNPKPRLFRLPEDEGLINRMGFNNPGADA 80 (310)
T ss_pred CCCEEECCEECCCCCEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCHHHHH
T ss_conf 97403564664997767455786577899999855785699667777777899998178715753088754898652899
Q ss_pred HHHHHHHHHHCC-CCCCEEECCCCC--HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC-CHHHHHHHHHHHHHH
Q ss_conf 999876410001-210001104542--4678877655542067552698303336532211000-023432111122444
Q gi|254780434|r 123 VFSRLSKIQPTS-PIGINLGANKDS--KDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQ-KKKNLERLLIHVMQT 198 (362)
Q Consensus 123 ~~~~l~~~~~~~-pi~vsI~~~~~s--~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~-~~~~l~~~l~~v~~~ 198 (362)
T Consensus 81 ~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~-ad~ielNiScPnt~g~~~l~~~~e~l~~l~~~vk~~ 159 (310)
T COG0167 81 FLEELKLAKYEGKPIGVNIGKNKGGPSEEAWADYARLLEEAGD-ADAIELNISCPNTPGGRALGQDPELLEKLLEAVKAA 159 (310)
T ss_pred HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCC-CCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHC
T ss_conf 9999886400147767634887578857889999999975077-887999853899977466543999999999999863
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC----CCCCCCCCCCCCCCCCHHHH
Q ss_conf 55655312688517865057777488899999876449829998066555323457----75446322113564542468
Q gi|254780434|r 199 REEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQC----SDNHEQDGGLSGSPLFLKST 274 (362)
Q Consensus 199 ~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~----~~~~~~~GGlSG~~i~~~al 274 (362)
T Consensus 160 ~---------~~Pv~vKl~P--~~~di~~iA~~~~~~g~Dgl~~~NT~~~~~~i~~~~~~~~~~~~~GGLSG~~ikp~al 228 (310)
T COG0167 160 T---------KVPVFVKLAP--NITDIDEIAKAAEEAGADGLIAINTTKSGMKIDLETKKPVLANETGGLSGPPLKPIAL 228 (310)
T ss_pred C---------CCCEEEEECC--CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 5---------6865999388--8899999999999749858999700366553012345556676777757510027899
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
Q ss_conf 99999997408974899967889999999999839997545278770697899999999999999838997789616975
Q gi|254780434|r 275 IALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMIYEGISLPKRIIQGLSDFLNKENEVNFENIRGSYT 354 (362)
Q Consensus 275 ~~i~~i~~~~~~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~~Gp~~~~~I~~~L~~~l~~~G~~si~e~iG~~~ 354 (362)
T Consensus 229 ~~v~~l~~~~~~~ipIIGvGGI~s~~DA~E~i~aGA~~vQv~Tal~~~Gp~i~~~I~~~l~~~l~~~g~~si~d~~G~~~ 308 (310)
T COG0167 229 RVVAELYKRLGGDIPIIGVGGIETGEDALEFILAGASAVQVGTALIYKGPGIVKEIIKGLARWLEEKGFESIQDIIGSAL 308 (310)
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCHHEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHCHHC
T ss_conf 99999998428997489846869699999999829756404112102085099999999999999819987999845330
Q ss_pred H
Q ss_conf 2
Q gi|254780434|r 355 E 355 (362)
Q Consensus 355 ~ 355 (362)
T Consensus 309 ~ 309 (310)
T COG0167 309 R 309 (310)
T ss_pred C
T ss_conf 5