HHsearch alignment for GI: 254780434 and conserved domain: COG0167

>COG0167 PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism].
Probab=100.00  E-value=0  Score=606.80  Aligned_cols=300  Identities=40%  Similarity=0.643  Sum_probs=280.1

Q ss_pred             CCEEEECCEECCCCEEECCCCC-CCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHH
Q ss_conf             3116888733599748534688-867798887403675241020013687899886268842555410000247777788
Q gi|254780434|r   44 RLNTKVAGISLSNPLGMAAGYD-KNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHT  122 (362)
Q Consensus        44 ~L~~~~~Gl~~~nPiglAaG~d-k~~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~  122 (362)
T Consensus         1 ~l~~~~~Gl~f~NPl~lAaG~~~~~~~~~~~~~~~g~G~i~~ktvt~~pq~Gnp~PR~~~l~~~~~~iN~mG~~N~G~~~   80 (310)
T COG0167           1 DLSTEILGLKFPNPLGLAAGFDGKNGEELDALAALGFGAIVTKTVTPEPQEGNPKPRLFRLPEDEGLINRMGFNNPGADA   80 (310)
T ss_pred             CCCEEECCEECCCCCEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCHHHHH
T ss_conf             97403564664997767455786577899999855785699667777777899998178715753088754898652899


Q ss_pred             HHHHHHHHHHCC-CCCCEEECCCCC--HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC-CHHHHHHHHHHHHHH
Q ss_conf             999876410001-210001104542--4678877655542067552698303336532211000-023432111122444
Q gi|254780434|r  123 VFSRLSKIQPTS-PIGINLGANKDS--KDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQ-KKKNLERLLIHVMQT  198 (362)
Q Consensus       123 ~~~~l~~~~~~~-pi~vsI~~~~~s--~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~-~~~~l~~~l~~v~~~  198 (362)
T Consensus        81 ~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~~-ad~ielNiScPnt~g~~~l~~~~e~l~~l~~~vk~~  159 (310)
T COG0167          81 FLEELKLAKYEGKPIGVNIGKNKGGPSEEAWADYARLLEEAGD-ADAIELNISCPNTPGGRALGQDPELLEKLLEAVKAA  159 (310)
T ss_pred             HHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCC-CCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHC
T ss_conf             9999886400147767634887578857889999999975077-887999853899977466543999999999999863


Q ss_pred             HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC----CCCCCCCCCCCCCCCCHHHH
Q ss_conf             55655312688517865057777488899999876449829998066555323457----75446322113564542468
Q gi|254780434|r  199 REEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQC----SDNHEQDGGLSGSPLFLKST  274 (362)
Q Consensus       199 ~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~----~~~~~~~GGlSG~~i~~~al  274 (362)
T Consensus       160 ~---------~~Pv~vKl~P--~~~di~~iA~~~~~~g~Dgl~~~NT~~~~~~i~~~~~~~~~~~~~GGLSG~~ikp~al  228 (310)
T COG0167         160 T---------KVPVFVKLAP--NITDIDEIAKAAEEAGADGLIAINTTKSGMKIDLETKKPVLANETGGLSGPPLKPIAL  228 (310)
T ss_pred             C---------CCCEEEEECC--CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             5---------6865999388--8899999999999749858999700366553012345556676777757510027899


Q ss_pred             HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
Q ss_conf             99999997408974899967889999999999839997545278770697899999999999999838997789616975
Q gi|254780434|r  275 IALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMIYEGISLPKRIIQGLSDFLNKENEVNFENIRGSYT  354 (362)
Q Consensus       275 ~~i~~i~~~~~~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~~Gp~~~~~I~~~L~~~l~~~G~~si~e~iG~~~  354 (362)
T Consensus       229 ~~v~~l~~~~~~~ipIIGvGGI~s~~DA~E~i~aGA~~vQv~Tal~~~Gp~i~~~I~~~l~~~l~~~g~~si~d~~G~~~  308 (310)
T COG0167         229 RVVAELYKRLGGDIPIIGVGGIETGEDALEFILAGASAVQVGTALIYKGPGIVKEIIKGLARWLEEKGFESIQDIIGSAL  308 (310)
T ss_pred             HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCHHEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHCHHC
T ss_conf             99999998428997489846869699999999829756404112102085099999999999999819987999845330


Q ss_pred             H
Q ss_conf             2
Q gi|254780434|r  355 E  355 (362)
Q Consensus       355 ~  355 (362)
T Consensus       309 ~  309 (310)
T COG0167         309 R  309 (310)
T ss_pred             C
T ss_conf             5