HHsearch alignment for GI: 254780434 and conserved domain: KOG2333

Probab=98.98  E-value=2.9e-08  Score=75.52  Aligned_cols=202  Identities=15%  Similarity=0.197  Sum_probs=122.3

Q ss_pred             HHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC-----CCCCC-CCCCHHHHHHHHHHHHHHHH
Q ss_conf             7641000121000110454246788776555420675526983033365-----32211-00002343211112244455
Q gi|254780434|r  127 LSKIQPTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPN-----TPGLR-SLQKKKNLERLLIHVMQTRE  200 (362)
Q Consensus       127 l~~~~~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPN-----t~g~~-~~~~~~~l~~~l~~v~~~~~  200 (362)
T Consensus       313 lkRH~sEdiFGVQlag~~p--dt~~kaaq~i~e~~~-VDFIDlN~GCPIDlvy~qG~GsALl~rp~rl~~~l~~m~~v--  387 (614)
T KOG2333         313 LKRHQSEDIFGVQLAGSKP--DTAAKAAQVIAETCD-VDFIDLNMGCPIDLVYRQGGGSALLNRPARLIRILRAMNAV--  387 (614)
T ss_pred             HHHCCCCCCEEEEECCCCH--HHHHHHHHHHHHHCC-EEEEECCCCCCHHEEECCCCCCHHHCCCHHHHHHHHHHHHH--
T ss_conf             6405766532367426886--889999999986166-00463268997110220677505423818999999999876--


Q ss_pred             HHHHHCCCCCEEEEECCCCC--CHHHHHHHHHHHH-HCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             65531268851786505777--7488899999876-44982999806655532345775446322113564542468999
Q gi|254780434|r  201 EEKIKTGKFVPIFLKISPDL--SEEELDDIAVEVL-SHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIAL  277 (362)
Q Consensus       201 ~~~~~~~~~~Pi~vKLsPd~--~~~~i~~ia~~a~-~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i  277 (362)
T Consensus       388 ------s~~iPiTVKiRTG~keg~~~a~~Li~~i~newg~savTlHG----RSRqQ---R------YT----K~AnWdYi  444 (614)
T KOG2333         388 ------SGDIPITVKIRTGTKEGHPVAHELIPRIVNEWGASAVTLHG----RSRQQ---R------YT----KSANWDYI  444 (614)
T ss_pred             ------CCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECC----CHHHH---H------HH----CCCCHHHH
T ss_conf             ------05787489984044367613889999986424753377527----20655---3------10----23682789


Q ss_pred             HHHHHHCCCCEEEEEECCCCCHHHHHHHHHCC--CCEEEECHHHHCCCHHHHHHHHHHHHHHH--HHCCCCCHHHHHCCC
Q ss_conf             99997408974899967889999999999839--99754527877069789999999999999--983899778961697
Q gi|254780434|r  278 AKIRQRVGPKIAIIGTGGISSTKDALDKIMAG--ANLIQLYSAMIYEGISLPKRIIQGLSDFL--NKENEVNFENIRGSY  353 (362)
Q Consensus       278 ~~i~~~~~~~i~IIg~GGI~s~~Da~e~l~aG--As~VQi~Tali~~Gp~~~~~I~~~L~~~l--~~~G~~si~e~iG~~  353 (362)
T Consensus       445 ~e~a~~ak~~l~liGNGDi~S~eDw~~~~~~~p~v~svMIaRGALIK-PWIFtEIkeqq-~wD~sSteRldiL~df~nyG  522 (614)
T KOG2333         445 EECADKAKSALPLIGNGDILSWEDWYERLNQNPNVDSVMIARGALIK-PWIFTEIKEQQ-HWDISSTERLDILKDFCNYG  522 (614)
T ss_pred             HHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCC-CHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHH
T ss_conf             99997445675267657506489998875359975447861453013-25766566653-27865058999999998622


Q ss_pred             CHHHH
Q ss_conf             52664
Q gi|254780434|r  354 TEYWA  358 (362)
Q Consensus       354 ~~~~~  358 (362)
T Consensus       523 LeHWG  527 (614)
T KOG2333         523 LEHWG  527 (614)
T ss_pred             HHHCC
T ss_conf             33107