HHsearch alignment for GI: 254780434 and conserved domain: PRK07565
>PRK07565 dihydroorotate dehydrogenase 2; Reviewed.
Probab=100.00 E-value=0 Score=471.73 Aligned_cols=292 Identities=20% Similarity=0.269 Sum_probs=237.9
Q ss_pred CCEEEECCEECCCCEEECCC-CCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCE--------EEEECCCCCEEECC
Q ss_conf 31168887335997485346-8886779888740367524102001368789988626--------88425554100002
Q gi|254780434|r 44 RLNTKVAGISLSNPLGMAAG-YDKNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRV--------FRLTKDRAIINKLG 114 (362)
Q Consensus 44 ~L~~~~~Gl~~~nPiglAaG-~dk~~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~--------~r~~~~~~iiN~~G 114 (362)
T Consensus 2 DLst~~~Gl~lkNPii~aSg~~~~~~~~~~~~~~~G~GavV~Ksi~~e-~i~~~~~~~~~~~~~~~~~~~~~~g~~n~~g 80 (333)
T PRK07565 2 DLSTTYLGLSLRNPLVASASPLTESLDNVKRLEDAGAGAVVLKSLFEE-QIRHEAAELARHLTQGTESYAEALDYFPEPA 80 (333)
T ss_pred CCCEEECCEECCCCCEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 663888999669988866605799999999999859619996877610-1457777778888889867533345314234
Q ss_pred CCCCCHHHHHHHHHHHHH--CCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC-CCCCCCHHHHHHH
Q ss_conf 477777889998764100--0121000110454246788776555420675526983033365322-1100002343211
Q gi|254780434|r 115 FNNAGYHTVFSRLSKIQP--TSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPG-LRSLQKKKNLERL 191 (362)
Q Consensus 115 l~N~G~~~~~~~l~~~~~--~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g-~~~~~~~~~l~~~ 191 (362)
T Consensus 81 ~~n~g~e~~l~~i~~~k~~~~~pvIaSi~g~--s~ee~~~~a~~~e~~--gadaiElNis~~~~~~~~~~~~~~~~~~~i 156 (333)
T PRK07565 81 YFRGGPEEYLELIRRAKEAVDIPVIASLNGS--SAGGWVDYARQIEEA--GADALELNIYYLPTDPDISGAEVEQRYLDI 156 (333)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEECCCC--CHHHHHHHHHHHHHC--CCCEEEEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 5686899999999987750598459874779--989999999999764--998899976677988654446507889999
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf 112244455655312688517865057777488899999876449829998066555323457754463-2211356454
Q gi|254780434|r 192 LIHVMQTREEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQ-DGGLSGSPLF 270 (362)
Q Consensus 192 l~~v~~~~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~-~GGlSG~~i~ 270 (362)
T Consensus 157 v~~V---------~~~~~~Pv~vKLsPn~t--di~~iA~aa~~~Gadgv~~iNT~~~~-~Id~e~~~~~~~~~lSgp~~~ 224 (333)
T PRK07565 157 LRAV---------KSAVSIPVAVKLSPYFS--NLANMAKRLDAAGADGLVLFNRFYQP-DIDLETLEVVPGLVLSTPAEL 224 (333)
T ss_pred HHHH---------HHHCCCCEEEECCCCCC--HHHHHHHHHHHCCCCEEEEECCCCCC-CCCCCCCEEECCCCCCCCCCC
T ss_conf 9999---------86468856873599821--09999999997499889984366656-331554437368666774312
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 24689999999740897489996788999999999983999754527877069789999999999999983899778961
Q gi|254780434|r 271 LKSTIALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMIYEGISLPKRIIQGLSDFLNKENEVNFENIR 350 (362)
Q Consensus 271 ~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~~Gp~~~~~I~~~L~~~l~~~G~~si~e~i 350 (362)
T Consensus 225 ~~alr~v~~v~~~~--~ipIiG~GGI~sg~DaiE~ilAGAsaVQv~Ta~~~~G~~v~~~i~~eL~~~m~~~G~~si~e~~ 302 (333)
T PRK07565 225 RLPLRWIAILSGRV--GADLAATTGVHDAEDVIKMLLAGADVVMIASALLRHGPDYIGTILAGLEDWMERHGYESLSQFR 302 (333)
T ss_pred CHHHHHHHHHHCCC--CCCEEEECCCCCHHHHHHHHHCCCCHHEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHC
T ss_conf 07889999996046--9898888895989999999980988633622366537279999999999999983999899961
Q ss_pred CCCC
Q ss_conf 6975
Q gi|254780434|r 351 GSYT 354 (362)
Q Consensus 351 G~~~ 354 (362)
T Consensus 303 G~l~ 306 (333)
T PRK07565 303 GSMS 306 (333)
T ss_pred CCCC
T ss_conf 7236