HHsearch alignment for GI: 254780434 and conserved domain: PRK11750
>PRK11750 gltB glutamate synthase subunit alpha; Provisional.
Probab=98.10 E-value=5.9e-05 Score=53.19 Aligned_cols=182 Identities=18% Similarity=0.223 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 78877655542067552698303336532211000023432111122444556553126885178650577774888999
Q gi|254780434|r 149 FILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLKISPDLSEEELDDI 228 (362)
Q Consensus 149 ~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~i 228 (362)
T Consensus 950 KV~~~IA~~R~stPGV~L----ISPPPHH---DIYSIEDLaQLI~DLK~~N--------p~ArVsVKLV---s~~GVGTI 1011 (1483)
T PRK11750 950 KVNPLIAKLRYSVPGVTL----ISPPPHH---DIYSIEDLAQLIFDLKQVN--------PKALVSVKLV---SEPGVGTI 1011 (1483)
T ss_pred CCCHHHHHHCCCCCCCCC----CCCCCCC---CCCCHHHHHHHHHHHHHCC--------CCCEEEEEEC---CCCCCCEE
T ss_conf 457999987079999780----4899966---5212778999999986358--------7754567740---23674311
Q ss_pred HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
Q ss_conf 99876449829998066555323457754463221135645-42468999999974089748999678899999999998
Q gi|254780434|r 229 AVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPL-FLKSTIALAKIRQRVGPKIAIIGTGGISSTKDALDKIM 307 (362)
Q Consensus 229 a~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i-~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da~e~l~ 307 (362)
T Consensus 1012 AaGVAKA~AD~I~ISG~dGG---TGAsp~tSik--haGlPwElGlaEthq~L~~n~LR~rV~l~~DGglkTGrDVviaal 1086 (1483)
T PRK11750 1012 ATGVAKAYADLITISGYDGG---TGASPLTSVK--YAGSPWELGLAETHQALVANGLRHKIRLQVDGGLKTGLDVIKAAI 1086 (1483)
T ss_pred ECCHHHCCCCEEEECCCCCC---CCCCCHHHHC--CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 20112047888998168898---7767323420--388865443899999999737546389996698561689999987
Q ss_pred CCCCEEEECHHHH-------------------------------CCC-H----HHHHHHHHHHHHHHHHCCCCCHHHHHC
Q ss_conf 3999754527877-------------------------------069-7----899999999999999838997789616
Q gi|254780434|r 308 AGANLIQLYSAMI-------------------------------YEG-I----SLPKRIIQGLSDFLNKENEVNFENIRG 351 (362)
Q Consensus 308 aGAs~VQi~Tali-------------------------------~~G-p----~~~~~I~~~L~~~l~~~G~~si~e~iG 351 (362)
T Consensus 1087 LGAeefgfgT~~Lia~GCiM~R~CHlntCpvGIATQ~~~Lr~~~f~G~pe~vvn~f~~vAeevReilA~LG~rsl~e~iG 1166 (1483)
T PRK11750 1087 LGAESFGFGTAPMVALGCKYLRICHLNNCATGVATQDEKLRKNHYHGLPEMVMNYFEFIAEETREWMAQLGVRSLEDLIG 1166 (1483)
T ss_pred HCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHC
T ss_conf 26055434427899844088786425889874015898888634289889999999999999999999968415999848
Q ss_pred CC
Q ss_conf 97
Q gi|254780434|r 352 SY 353 (362)
Q Consensus 352 ~~ 353 (362)
T Consensus 1167 r~ 1168 (1483)
T PRK11750 1167 RT 1168 (1483)
T ss_pred CC
T ss_conf 63