HHsearch alignment for GI: 254780434 and conserved domain: PRK13396
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional.
Probab=95.17 E-value=0.14 Score=30.48 Aligned_cols=233 Identities=18% Similarity=0.246 Sum_probs=116.8
Q ss_pred CEEEE--CCEECC--CCEEECCCCC--CCHH----HHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECC
Q ss_conf 11688--873359--9748534688--8677----988874036752410200136878998862688425554100002
Q gi|254780434|r 45 LNTKV--AGISLS--NPLGMAAGYD--KNAE----VPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLG 114 (362)
Q Consensus 45 L~~~~--~Gl~~~--nPiglAaG~d--k~~~----~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~G 114 (362)
T Consensus 85 ~~v~~~~G~v~~G~~~~~~iiAGPCsvEs~eq~~~~A~~vk~~Ga~~lRgGa--~KPRT---sP--------------ys 145 (352)
T PRK13396 85 VVVPTPNGPVTFGENHPVVVVAGPCSVENEEMIVETAKRVKAAGAKFLRGGA--YKPRT---SP--------------YA 145 (352)
T ss_pred EEEECCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEECCCC--CCCCC---CC--------------CC
T ss_conf 3995689877747997799996787568999999999999983998782650--24789---98--------------54
Q ss_pred CCCCCHHHHHHHHHHH--HHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 4777778899987641--00012100011045424678877655542067552698303336532211000023432111
Q gi|254780434|r 115 FNNAGYHTVFSRLSKI--QPTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLL 192 (362)
Q Consensus 115 l~N~G~~~~~~~l~~~--~~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l 192 (362)
T Consensus 146 FqGlG-eeGL~~L~~ak~e~GLpvvTEV~~~-----------~~ve~v~~~~DilQI--------GARn~qNf~LL---- 201 (352)
T PRK13396 146 FQGHG-ESALELLAAAREATGLGIITEVMDA-----------ADLDKIAEVADVIQV--------GARNMQNFSLL---- 201 (352)
T ss_pred CCCCC-HHHHHHHHHHHHHHCCCEEEEECCH-----------HHHHHHHHHCCEEEE--------CCHHHCCHHHH----
T ss_conf 35870-8799999999998699726886799-----------999999865888998--------92540599999----
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 12244455655312688517865057777488899999876449829998066555323457754463221135645424
Q gi|254780434|r 193 IHVMQTREEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLK 272 (362)
Q Consensus 193 ~~v~~~~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~ 272 (362)
T Consensus 202 ~~~----------g~t~kPVllKrg~~~ti~ewl~AaEyi~~~Gn~~viLcER-----Girtfe~~-----~-~RntlD- 259 (352)
T PRK13396 202 KKV----------GAQDKPVLLKRGMSATIDEWLMAAEYILAAGNPNVILCER-----GIRTFDRQ-----Y-TRNTLD- 259 (352)
T ss_pred HHH----------HCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC-----CCCCCCCC-----C-CCCCCC-
T ss_conf 998----------5469807973788899999986999999769985899948-----97756676-----5-467755-
Q ss_pred HHHHHHHHHHHCCCCEEEEEE----CCCCCH--HHHHHHHHCCCCEEEECHH-----HHCCCH-----HHHHHHHHHHHH
Q ss_conf 689999999740897489996----788999--9999999839997545278-----770697-----899999999999
Q gi|254780434|r 273 STIALAKIRQRVGPKIAIIGT----GGISST--KDALDKIMAGANLIQLYSA-----MIYEGI-----SLPKRIIQGLSD 336 (362)
Q Consensus 273 al~~i~~i~~~~~~~i~IIg~----GGI~s~--~Da~e~l~aGAs~VQi~Ta-----li~~Gp-----~~~~~I~~~L~~ 336 (362)
T Consensus 260 -l~aip~~k~~t--hlPVi~DPSH~~G~r~~V~~la~AAva~GaDGL~iEvHp~P~~AlSDg~Q~l~p~~f~~l~~~l~- 335 (352)
T PRK13396 260 -LSVIPVLRSLT--HLPIMIDPSHGTGKSEYVPSMAMAAIAAGTDSLMIEVHPNPAKALSDGPQSLTPERFDRLMQELA- 335 (352)
T ss_pred -HHHHHHHHHCC--CCCEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH-
T ss_conf -78879997489--99889789864578727999999999839988999846880115787523589999999999999-
Q ss_pred HHHHCCCCCHHHHHCCCC
Q ss_conf 999838997789616975
Q gi|254780434|r 337 FLNKENEVNFENIRGSYT 354 (362)
Q Consensus 337 ~l~~~G~~si~e~iG~~~ 354 (362)
T Consensus 336 --------~i~~~vgr~~ 345 (352)
T PRK13396 336 --------VIGKTVGRWP 345 (352)
T ss_pred --------HHHHHHCCCC
T ss_conf --------9999967898