HHsearch alignment for GI: 254780434 and conserved domain: PRK13523
>PRK13523 NADPH dehydrogenase NamA; Provisional.
Probab=99.49 E-value=8.9e-12 Score=99.17 Aligned_cols=258 Identities=16% Similarity=0.141 Sum_probs=152.9
Q ss_pred EEEECCEECCCCEEECCC----C-CCCH-------HHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEC
Q ss_conf 168887335997485346----8-8867-------798887403675241020013687899886268842555410000
Q gi|254780434|r 46 NTKVAGISLSNPLGMAAG----Y-DKNA-------EVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKL 113 (362)
Q Consensus 46 ~~~~~Gl~~~nPiglAaG----~-dk~~-------~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~ 113 (362)
T Consensus 6 P~~ig~l~lkNRiv~aPm~~~~~~~~dG~~t~~~~~yy~~rA~GG~GlIi~e~~~V~~~-g~~~~~~------------~ 72 (337)
T PRK13523 6 PYTIKDVTLKNRIVMSPMCMYSSENKDGKVTNFHLIHYGTRAAGQVGLIIVEATAVTPE-GRISDKD------------L 72 (337)
T ss_pred CCEECCEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEECCC-CCCCCCC------------C
T ss_conf 70289999778617066688656688999999999999999768972999835886622-1479987------------5
Q ss_pred CCCC----CCHHHHHHHHHHHH----------------HCCCCCCEEECCC--------CC----HHHHHHHHHHHHHHC
Q ss_conf 2477----77788999876410----------------0012100011045--------42----467887765554206
Q gi|254780434|r 114 GFNN----AGYHTVFSRLSKIQ----------------PTSPIGINLGANK--------DS----KDFILDYVSGIRLFF 161 (362)
Q Consensus 114 Gl~N----~G~~~~~~~l~~~~----------------~~~pi~vsI~~~~--------~s----~~~~~dy~~~~~~~~ 161 (362)
T Consensus 73 ~i~~d~~i~~~~~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~aPS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~rA~ 152 (337)
T PRK13523 73 GIWDDEHIEGLHKLVTFIHDHGAKAAIQLAHAGRKAELEGDIVAPSAIPFDEKSKTPVEMTKEQIKETVLAFKQAAKRAK 152 (337)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 56627789999999999975588688750017755678998107778867889998864999999999999999999999
Q ss_pred -CCCCEEEEE---------CCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC------CHH
Q ss_conf -755269830---------3336--5322110000234321111224445565531268851786505777------748
Q gi|254780434|r 162 -TIASYFTIN---------ISSP--NTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLKISPDL------SEE 223 (362)
Q Consensus 162 -~~aD~iEiN---------iSCP--Nt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vKLsPd~------~~~ 223 (362)
T Consensus 153 ~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~YGGs~eNR~Rf~lEii~aVr~-----~~~~~v~vRis~~d~~~gG~~~~ 227 (337)
T PRK13523 153 EAGFDVIEIHGAHGYLINEFLSPLSNKRTDEYGGSPENRYRFLREIIDAVKE-----VWDGPLFVRISASDYHPDGLTVQ 227 (337)
T ss_pred HCCCCEEEEECCCCHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH-----HCCCCEEEEECCCCCCCCCCCHH
T ss_conf 8499989981354358998479232489585588889998899999999998-----65886399933655578998989
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
Q ss_conf 88999998764498299980665553234577544632211356454246899999997408974899967889999999
Q gi|254780434|r 224 ELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDAL 303 (362)
Q Consensus 224 ~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da~ 303 (362)
T Consensus 228 d~~~~~~~l~~~GvD~i~vs~G~~--~----~~~~~~~~g~--------~~~~a~~ik~~~--~ipvi~vG~i~~~~~ae 291 (337)
T PRK13523 228 DYVQYAKWMKEQGVDLIDVSSGAV--V----PARIDVYPGY--------QVPFAEHIKEHA--NIATGAVGLITTGAQAE 291 (337)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCC--C----CCCCCCCCCC--------CHHHHHHHHHHC--CCCEEEECCCCCHHHHH
T ss_conf 999999999974999899578855--4----7767778753--------348999999876--97099983869999999
Q ss_pred HHHHCC-CCEEEECHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 999839-99754527877069789999999999999
Q gi|254780434|r 304 DKIMAG-ANLIQLYSAMIYEGISLPKRIIQGLSDFL 338 (362)
Q Consensus 304 e~l~aG-As~VQi~Tali~~Gp~~~~~I~~~L~~~l 338 (362)
T Consensus 292 ~~l~~G~aD~V~~gR~~iad-Pd~p~kaa~~~~~ei 326 (337)
T PRK13523 292 EILNNNRADLIFIGRELLRN-PYFPRIAANELGFEI 326 (337)
T ss_pred HHHHCCCCCHHHHHHHHHHC-CCHHHHHHHHCCCCC
T ss_conf 99987994799989999989-109999997669999