HHsearch alignment for GI: 254780434 and conserved domain: TIGR01361
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase; InterPro: IPR006268 These sequences are one of at least three types of phospho-2-dehydro-3-deoxyheptonate aldolase (DAHP synthase). This enzyme catalyzes the first of 7 steps in the biosynthesis of chorismate, that last common precursor of all three aromatic amino acids and of PABA, ubiquinone and menaquinone. Some members of this family, including an experimentally characterised member from Bacillus subtilis, are bifunctional, with a chorismate mutase domain N-terminal to this region. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.; GO: 0016832 aldehyde-lyase activity, 0009073 aromatic amino acid family biosynthetic process.
Probab=91.20 E-value=0.55 Score=26.45 Aligned_cols=93 Identities=16% Similarity=0.276 Sum_probs=63.9
Q ss_pred HCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECC-CCCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 00121000110454246788776555420675526983033-36532----21100002343211112244455655312
Q gi|254780434|r 132 PTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINIS-SPNTP----GLRSLQKKKNLERLLIHVMQTREEEKIKT 206 (362)
Q Consensus 132 ~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiS-CPNt~----g~~~~~~~~~l~~~l~~v~~~~~~~~~~~ 206 (362)
T Consensus 131 ~~KPVLLKRG~----~aTi~EwL~AAEYI--------l~~GsN~~ViLCERGIRTfE~~TR~TLD~saV~~------~K~ 192 (262)
T TIGR01361 131 QGKPVLLKRGM----GATIEEWLEAAEYI--------LSEGSNGNVILCERGIRTFEKSTRNTLDLSAVPL------LKK 192 (262)
T ss_pred CCCCEEEECCC----CHHHHHHHHHHHHH--------HHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH------HHH
T ss_conf 37975530772----15899999999999--------8468899548997585676300245333789999------986
Q ss_pred CCCCEEEEECCCCCCH-HHHHHHHHHHHHCCCCEEEE
Q ss_conf 6885178650577774-88899999876449829998
Q gi|254780434|r 207 GKFVPIFLKISPDLSE-EELDDIAVEVLSHKVEGIIV 242 (362)
Q Consensus 207 ~~~~Pi~vKLsPd~~~-~~i~~ia~~a~~~g~dGiv~ 242 (362)
T Consensus 193 ~tHLPi~VDPSH~~GrRdLV~plA~AA~A~GADgl~i 229 (262)
T TIGR01361 193 ETHLPIIVDPSHAAGRRDLVLPLAKAAIAAGADGLMI 229 (262)
T ss_pred CCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 0589878718798762457889999989757473689