HHsearch alignment for GI: 254780434 and conserved domain: cd00408

>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=96.30  E-value=0.071  Score=32.43  Aligned_cols=189  Identities=16%  Similarity=0.162  Sum_probs=91.4

Q ss_pred             HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHH-HHCCCCCCEEECCCCC
Q ss_conf             779888740367524102001368789988626884255541000024777778899987641-0001210001104542
Q gi|254780434|r   68 AEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVFSRLSKI-QPTSPIGINLGANKDS  146 (362)
Q Consensus        68 ~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~~~l~~~-~~~~pi~vsI~~~~~s  146 (362)
T Consensus        21 ~~~i~~l~~~Gv~gi~v~G~tGE~---------~~L------------s~~Er~~l~~~~~~~~~~~~pvi~gv~~~s--   77 (281)
T cd00408          21 RRLVEFLIEAGVDGLVVLGTTGEA---------PTL------------TDEERKEVIEAVVEAVAGRVPVIAGVGANS--   77 (281)
T ss_pred             HHHHHHHHHCCCCEEEECEECCCH---------HHC------------CHHHHHHHHHHHHHHCCCCCEEEEECCCCC--
T ss_conf             999999997699989968545243---------138------------999999999999998089850999578788--


Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC-----C
Q ss_conf             46788776555420675526983033365322110000234321111224445565531268851786505777-----7
Q gi|254780434|r  147 KDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLKISPDL-----S  221 (362)
Q Consensus       147 ~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vKLsPd~-----~  221 (362)
T Consensus        78 ~~~~~~~a~~a~~~--Gad~i~v--~pP~y~~----~~~~~i~~~~~~i~~---------~~~~pi~iYn~P~~~g~~l~  140 (281)
T cd00408          78 TREAIELARHAEEA--GADGVLV--VPPYYNK----PSQEGIVAHFKAVAD---------ASDLPVILYNIPGRTGVDLS  140 (281)
T ss_pred             HHHHHHHHHHHHHC--CCCEEEE--CCCCCCC----CCHHHHHHHHHHHHH---------CCCCCEEEEECCCCCCCCCC
T ss_conf             99999999999975--9998998--7997778----999999999999985---------55997799727753167768


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
Q ss_conf             48889999987644982999806655532345775446322113564542468999999974089748999678899999
Q gi|254780434|r  222 EEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKD  301 (362)
Q Consensus       222 ~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~D  301 (362)
T Consensus       141 ~~~l~~L~----~--~~nv~giK~---------s~---------~------d~~~~~~~~~~~~~~~~v~~-G---~d~~  186 (281)
T cd00408         141 PETIARLA----E--HPNIVGIKD---------SS---------G------DLDRLTRLIALLGPDFAVLS-G---DDDL  186 (281)
T ss_pred             HHHHHHHH----C--CCCEEEEEC---------CC---------C------CHHHHHHHHHHCCCCCEEEC-C---CHHH
T ss_conf             99999984----8--999899984---------88---------9------99999999997599705626-9---6688


Q ss_pred             HHHHHHCCCCEEEECHHHHCCCHHHHHHHHH
Q ss_conf             9999983999754527877069789999999
Q gi|254780434|r  302 ALDKIMAGANLIQLYSAMIYEGISLPKRIIQ  332 (362)
Q Consensus       302 a~e~l~aGAs~VQi~Tali~~Gp~~~~~I~~  332 (362)
T Consensus       187 ~~~~l~~G~~G~i~~~~n~~--P~~~~~l~~  215 (281)
T cd00408         187 LLPALALGADGAISGAANVA--PKLAVALYE  215 (281)
T ss_pred             HHHHHHCCCCCEEECHHHCC--HHHHHHHHH
T ss_conf             99998728981440242316--999999999