HHsearch alignment for GI: 254780434 and conserved domain: cd00564
>cd00564 TMP_TenI Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.
Probab=95.38 E-value=0.22 Score=29.18 Aligned_cols=91 Identities=18% Similarity=0.242 Sum_probs=59.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCEEE
Q ss_conf 7865057777488899999876449829998066555323457754463221135645-424689999999740897489
Q gi|254780434|r 212 IFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPL-FLKSTIALAKIRQRVGPKIAI 290 (362)
Q Consensus 212 i~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i-~~~al~~i~~i~~~~~~~i~I 290 (362)
T Consensus 96 ~iiG~S~----h~~~e-~~~a~~~g~DYi~~gpv------f~T~tK---------~~~~~~~g~~~l~~~~~~~--~~Pv 153 (196)
T cd00564 96 LIIGVST----HSLEE-ALRAEELGADYVGFGPV------FPTPTK---------PGAGPPLGLELLREIAELV--EIPV 153 (196)
T ss_pred CEEEECC----CCHHH-HHHHHHHCCCEEEECCC------CCCCCC---------CCCCCCCCHHHHHHHHHHC--CCCE
T ss_conf 7588247----88999-99988709993886465------578988---------8877877889999999867--9998
Q ss_pred EEECCCCCHHHHHHHHHCCCCEEEECHHHHCC-CHH
Q ss_conf 99678899999999998399975452787706-978
Q gi|254780434|r 291 IGTGGISSTKDALDKIMAGANLIQLYSAMIYE-GIS 325 (362)
Q Consensus 291 Ig~GGI~s~~Da~e~l~aGAs~VQi~Tali~~-Gp~ 325 (362)
T Consensus 154 ~AiGGI-~~~ni~~~~~~G~~giAv~s~i~~~~dp~ 188 (196)
T cd00564 154 VAIGGI-TPENAAEVLAAGADGVAVISAITGADDPA 188 (196)
T ss_pred EEECCC-CHHHHHHHHHCCCCEEEEHHHHHCCCCHH
T ss_conf 998589-99999999980999999729977799999