>cd02911 arch_FMN Archeal FMN-binding domain. This family of archaeal proteins are part of the NAD(P)H-dependent flavin oxidoreductase (oxidored) FMN-binding family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN. The specific function of this group is unknown.

Probab=99.47 E-value=3.1e-12 Score=102.27 Aligned_cols=215 Identities=16% Similarity=0.263 Sum_probs=129.1 Q ss_pred CEEEC--CCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEE--CC-CCCCCHHHHHHHHHHHH Q ss_conf 74853--468886779888740367524102001368789988626884255541000--02-47777788999876410 Q gi|254780434|r 57 PLGMA--AGYDKNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINK--LG-FNNAGYHTVFSRLSKIQ 131 (362) Q Consensus 57 PiglA--aG~dk~~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~--~G-l~N~G~~~~~~~l~~~~ 131 (362) T Consensus 1 PvvLAPMAGVT-D~p-Frr~~~~~~g~~~~gg~~~~~~~---------~~~~~~~~~~~~ke~~~~~~~~~~~~~~~~~~ 69 (233) T cd02911 1 PVALASMAGIT-DGD-FCRKRADHAGLVFLGGYNLDERT---------IEAARKLVKRGRKEFLPDDPLEFIEGEIKALK 69 (233) T ss_pred CEEEECCCCCC-CHH-HHHHHHHHCCCEEEECCCCHHHH---------HHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHC T ss_conf 94885789995-899-99999983795797212201899---------99999999717232123451013367887622 Q ss_pred -HCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC------CCCCCCCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf -00121000110454246788776555420675526983033365------32211000023432111122444556553 Q gi|254780434|r 132 -PTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPN------TPGLRSLQKKKNLERLLIHVMQTREEEKI 204 (362) Q Consensus 132 -~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPN------t~g~~~~~~~~~l~~~l~~v~~~~~~~~~ 204 (362) T Consensus 70 ~~~~pv~vQi~g~~--~e---~~~~Aa~~~~~~~d~IDiN~GCP~~kV~~~g~GsaLl~dp~~~~~iv~avk~------- 137 (233) T cd02911 70 DSNVLVGVNVRSSS--LE---PLLNAAALVAKNAAILEINAHCRQPEMVEAGAGEALLKDPERLSEFIKALKE------- 137 (233) T ss_pred CCCCCEEEEEECCC--HH---HHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCHHHHCCCHHHHHHHHHHHHH------- T ss_conf 46897189930699--99---9999999974369999997999928983797537773898999999999985------- Q ss_pred HCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC Q ss_conf 12688517865057777488899999876449829998066555323457754463221135645424689999999740 Q gi|254780434|r 205 KTGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRV 284 (362) Q Consensus 205 ~~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~ 284 (362) T Consensus 138 ---~~~PVtvKiR~G~d~-~~~~~a~~~e~aG~~~l~v~-~-------------~~~~---~~----ad~~~I~~~---- 188 (233) T cd02911 138 ---TGVPVSVKIRAGVDV-DDEELARLIEKAGADIIHVD-A-------------MDPG---NH----ADLKKIRDI---- 188 (233) T ss_pred ---HCCCEEEEEECCCCC-CHHHHHHHHHHHCCCEEEEE-C-------------CCCC---CH----HHHHHHHHH---- T ss_conf ---389842798569998-88999999998396079943-2-------------0778---50----899999986---- Q ss_pred CCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCCC Q ss_conf 897489996788999999999983999754527877069 Q gi|254780434|r 285 GPKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMIYEG 323 (362) Q Consensus 285 ~~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~~G 323 (362) T Consensus 189 ~~~i~VigNGDI~s~eda~~~~~~G~DgVMIgRgAL~n~ 227 (233) T cd02911 189 STELFIIGNNSVTTIESAKEMFSYGADMVSVARASLPEN 227 (233) T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCEEEECHHHCCCC T ss_conf 379879980896999999999985999999738755685

HHsearch alignment for GI: 254780434 and conserved domain: cd02911