HHsearch alignment for GI: 254780434 and conserved domain: cd04731
>cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF). Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and plants, or peformed by a heterodimer (HisH-glutaminase and HisF-cyclase), like in bacteria.
Probab=98.51 E-value=6.3e-06 Score=59.76 Aligned_cols=176 Identities=16% Similarity=0.195 Sum_probs=99.1
Q ss_pred HHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99987641000121000110454246788776555420675526983033365322110000234321111224445565
Q gi|254780434|r 123 VFSRLSKIQPTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEE 202 (362)
Q Consensus 123 ~~~~l~~~~~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~ 202 (362)
T Consensus 62 ~i~~i~~---~~~~pi~vGGGIrs~~~~~------~~l~~GadkVvigs~~--------~~n~~~~~~~~~~~Gsq~Iv~ 124 (243)
T cd04731 62 VVERVAE---EVFIPLTVGGGIRSLEDAR------RLLRAGADKVSINSAA--------VENPELIREIAKRFGSQCVVV 124 (243)
T ss_pred HHHHHHH---HCCCCEEEEEEEEEHHHHH------HHHHCCCCEEEECCCC--------CCCCCHHHHHHHHCCCCCEEE
T ss_conf 9999998---6798689985066479999------9997799789989844--------237714357887569930999
Q ss_pred HHHC----CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 5312----688517865057777488899999876449829998066555323457754463221135645424689999
Q gi|254780434|r 203 KIKT----GKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALA 278 (362)
Q Consensus 203 ~~~~----~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~ 278 (362)
T Consensus 125 siD~k~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~G~geil~td--I~~DG-----------t~~G~d-----~~l~~ 186 (243)
T cd04731 125 SIDAKRRGDGGYEVYTHGGRKPTGLDAVEWAKEVEELGAGEILLTS--MDRDG-----------TKKGYD-----LELIR 186 (243)
T ss_pred EEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEE--ECCCC-----------CCCCCC-----HHHHH
T ss_conf 9997653789628984698441267899999999846987899987--25768-----------566579-----99999
Q ss_pred HHHHHCCCCEEEEEECCCCCHHHHHHHHH-CCCCEEEECHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99974089748999678899999999998-399975452787706978999999999999998
Q gi|254780434|r 279 KIRQRVGPKIAIIGTGGISSTKDALDKIM-AGANLIQLYSAMIYEGISLPKRIIQGLSDFLNK 340 (362)
Q Consensus 279 ~i~~~~~~~i~IIg~GGI~s~~Da~e~l~-aGAs~VQi~Tali~~Gp~~~~~I~~~L~~~l~~ 340 (362)
T Consensus 187 ~i~~~~--~~piI~sGGi~~~~di~~~l~~~~~~gv~~g~~~~~~~~~-l~----~~k~~L~~ 242 (243)
T cd04731 187 AVSSAV--NIPVIASGGAGKPEHFVEAFEEGGADAALAASIFHFGEYT-IA----ELKEYLAE 242 (243)
T ss_pred HHHHHC--CCCEEEECCCCCHHHHHHHHHHCCCEEEEEHHHHHCCCCC-HH----HHHHHHHH
T ss_conf 999868--9999998899999999999987898299882276769989-99----99999861