HHsearch alignment for GI: 254780434 and conserved domain: cd04732
>cd04732 HisA HisA. Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene.
Probab=98.22 E-value=2.9e-05 Score=55.33 Aligned_cols=138 Identities=22% Similarity=0.211 Sum_probs=82.8
Q ss_pred HCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 06755269830333653221100002343211112244455655312688517865057777488899999876449829
Q gi|254780434|r 160 FFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEG 239 (362)
Q Consensus 160 ~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dG 239 (362)
T Consensus 92 ~~~Ga~kvvi~s~~--------~~~~~~~~~~~~~~G~q~iv~slD~k~~-~~~~~~~~~~~~~~~~~~i~~~~~~g~ge 162 (234)
T cd04732 92 LDLGVSRVIIGTAA--------VKNPELVKELLKEYGGERIVVGLDAKDG-KVATKGWLETSEVSLEELAKRFEELGVKA 162 (234)
T ss_pred HHCCCCEEEECCCH--------HHCHHHHHHHHHHCCCCCEEEEEEEECC-CHHCCCCCEEECCCHHHHHHHHHHCCCCE
T ss_conf 86488718971401--------1082789999998297646999997512-00016864001351699999997458646
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHH
Q ss_conf 99806655532345775446322113564542468999999974089748999678899999999998399975452787
Q gi|254780434|r 240 IIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSAM 319 (362)
Q Consensus 240 iv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Tal 319 (362)
T Consensus 163 iilt~--i~~d-----------Gt~~G~d-----~~ll~~i~~~~--~~p~i~~GGv~s~~di~~l~~~g~~gvivgsAl 222 (234)
T cd04732 163 IIYTD--ISRD-----------GTLSGPN-----FELYKELAAAT--GIPVIASGGVSSLDDIKALKELGVAGVIVGKAL 222 (234)
T ss_pred EEEEE--ECCC-----------CCCCCCC-----HHHHHHHHHHC--CCCEEEEECCCCHHHHHHHHHCCCCEEEEEHHH
T ss_conf 99876--4256-----------6535689-----99999998657--998999818999999999997799899998898
Q ss_pred HCCCHHHH
Q ss_conf 70697899
Q gi|254780434|r 320 IYEGISLP 327 (362)
Q Consensus 320 i~~Gp~~~ 327 (362)
T Consensus 223 -h~g~i~~ 229 (234)
T cd04732 223 -YEGKITL 229 (234)
T ss_pred -HCCCCCH
T ss_conf -7799898