HHsearch alignment for GI: 254780434 and conserved domain: pfam00218
>pfam00218 IGPS Indole-3-glycerol phosphate synthase.
Probab=97.65 E-value=0.00083 Score=45.44 Aligned_cols=196 Identities=19% Similarity=0.244 Sum_probs=108.6
Q ss_pred EECCEECCCCE-E-ECCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHH
Q ss_conf 88873359974-8-534688867798887403675241020013687899886268842555410000247777788999
Q gi|254780434|r 48 KVAGISLSNPL-G-MAAGYDKNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVFS 125 (362)
Q Consensus 48 ~~~Gl~~~nPi-g-lAaG~dk~~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~~ 125 (362)
T Consensus 50 iIAEiKraSPS~G~i~~~~d-p~~iA~~Y~~~GA~aiSVLT---d-------~~~F~----------------Gs~~~L~ 102 (254)
T pfam00218 50 LIAEVKKASPSKGLIREDFD-PAEIARAYEAAGASAISVLT---E-------PKYFQ----------------GSLEYLR 102 (254)
T ss_pred EEEEEECCCCCCCCCCCCCC-HHHHHHHHHHCCCCEEEEEC---C-------CCCCC----------------CCHHHHH
T ss_conf 89877268999998689899-99999999977983799842---6-------78679----------------8799999
Q ss_pred HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87641000121000110454246788776555420675526983033365322110000234321111224445565531
Q gi|254780434|r 126 RLSKIQPTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIK 205 (362)
Q Consensus 126 ~l~~~~~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~ 205 (362)
T Consensus 103 ~vr~~-v~lPiLr--------KDFIid~yQI~ear~~GADaiLLI~~~---------L~~~~l~~l~~~a~~l------- 157 (254)
T pfam00218 103 EVREA-VSLPVLR--------KDFIIDEYQIYEARAYGADTVLLIVAV---------LSDELLEELYEYARSL------- 157 (254)
T ss_pred HHHHH-CCCCEEC--------CHHEEEHHHHHHHHHCCCCEEEHHHHC---------CCHHHHHHHHHHHHHH-------
T ss_conf 99986-4885111--------410465999999998088863144711---------9999999999999984-------
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 26885178650577774888999998764498299980665553234577544632211356454246899999997408
Q gi|254780434|r 206 TGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVG 285 (362)
Q Consensus 206 ~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~ 285 (362)
T Consensus 158 ---gl~~LvEvh---~~~E----l~~al~~~a~-iIGINN---Rn-L~t---------------f~vd~~~t~~L~~~ip 207 (254)
T pfam00218 158 ---GMEPLVEVH---NEEE----LERALALGAK-LIGVNN---RN-LKT---------------FEVDLNTTRRLAPMVP 207 (254)
T ss_pred ---CCEEEEEEC---CHHH----HHHHHHCCCC-EEEECC---CC-HHH---------------HHCCHHHHHHHHHHCC
T ss_conf ---886798868---9999----9999848997-896327---88-465---------------1005799999995589
Q ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCC-CHH
Q ss_conf 9748999678899999999998399975452787706-978
Q gi|254780434|r 286 PKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMIYE-GIS 325 (362)
Q Consensus 286 ~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~~-Gp~ 325 (362)
T Consensus 208 ~~~~~VsESGI~~~~di~~l~~~G~~~~LIGe~lm~~~dp~ 248 (254)
T pfam00218 208 EDVLLVAESGISTPEDVEKLAKHGANAFLVGESLMRAPDVR 248 (254)
T ss_pred CCCEEEECCCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHH
T ss_conf 89879983899999999999987999999896875799989