HHsearch alignment for GI: 254780434 and conserved domain: pfam00290
>pfam00290 Trp_syntA Tryptophan synthase alpha chain.
Probab=98.36 E-value=7.3e-05 Score=52.58 Aligned_cols=210 Identities=19% Similarity=0.223 Sum_probs=111.1
Q ss_pred ECCC-CCC--CHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH---HC
Q ss_conf 5346-888--67798887403675241020013687899886268842555410000247777788999876410---00
Q gi|254780434|r 60 MAAG-YDK--NAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVFSRLSKIQ---PT 133 (362)
Q Consensus 60 lAaG-~dk--~~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~~~l~~~~---~~ 133 (362)
T Consensus 15 i~aG~P~~~~~~~~i~~l~~~GaDiiEiGiPFSDP~A--DGpvIq-~A~~~AL~~G-----~~~~~~~~~~~~~r~~~~~ 86 (258)
T pfam00290 15 VTAGDPDLETTLEILEALEEAGADAIELGIPFSDPLA--DGPTIQ-RANLRALAGG-----MTLDQTLELVEEIRNKGTS 86 (258)
T ss_pred EECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC--CCHHHH-HHHHHHHHCC-----CCHHHHHHHHHHHHHCCCC
T ss_conf 7073899899999999999769999997899888766--589999-9999999869-----9699999999985512899
Q ss_pred CCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 12100011045424678877655542067552698303336532211000023432111122444556553126885178
Q gi|254780434|r 134 SPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIF 213 (362)
Q Consensus 134 ~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~ 213 (362)
T Consensus 87 ~pivlM~Y~N~i~~~G~e~F~~~~~~~G--vdGvIi----pDLP-------~eE~~~~~~~~~----------~~~l~~I 143 (258)
T pfam00290 87 VPIVLMTYYNPVLNYGIERFYAQAAEAG--VDGLII----PDLP-------PEEADPLREAAE----------KHGIDLI 143 (258)
T ss_pred CCEEEEEECHHHHHCCHHHHHHHHHHCC--CCEEEC----CCCC-------HHHHHHHHHHHH----------HCCCCEE
T ss_conf 8889985208898729999999999759--977870----7999-------889999999998----------4584358
Q ss_pred EECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 65057777488899999876449829998066555323457754463221135645424689999999740897489996
Q gi|254780434|r 214 LKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGT 293 (362)
Q Consensus 214 vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~ 293 (362)
T Consensus 144 ~lvsPtt~~~Ri~~i~~~s-----~gFiY~vs---~~Gv--------TG--~~~~~~~~~~~~i~~ik~~t--~~Pv~vG 203 (258)
T pfam00290 144 FLVAPTTSDERLKTISEAA-----SGFVYLVS---RAGV--------TG--ARNAFNAQLDELVERLKKYT--NVPVAVG 203 (258)
T ss_pred EEECCCCCHHHHHHHHHHC-----CCEEEEEE---CCCC--------CC--CCCCCCHHHHHHHHHHHHCC--CCCEEEE
T ss_conf 8845888199999999608-----98089985---3445--------67--65556388999999998606--9984899
Q ss_pred CCCCCHHHHHHHHHCCCCEEEECHHHHC
Q ss_conf 7889999999999839997545278770
Q gi|254780434|r 294 GGISSTKDALDKIMAGANLIQLYSAMIY 321 (362)
Q Consensus 294 GGI~s~~Da~e~l~aGAs~VQi~Tali~ 321 (362)
T Consensus 204 FGIs~~e~v~~~-~~~aDGvIVGSaiv~ 230 (258)
T pfam00290 204 FGISTPEHVKKI-AAGADGVIVGSAIVD 230 (258)
T ss_pred ECCCCHHHHHHH-HCCCCEEEECHHHHH
T ss_conf 457999999999-815999998499999