HHsearch alignment for GI: 254780434 and conserved domain: pfam01070
>pfam01070 FMN_dh FMN-dependent dehydrogenase.
Probab=99.75 E-value=5.9e-15 Score=120.63 Aligned_cols=259 Identities=24% Similarity=0.288 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHH-HHHHHCC-CCCCCCCCEEEECCEECCCCEEECC----C-CCCCHH--HHHHHHHCCCCEEECCCCC
Q ss_conf 6788999999996-2011104-6788963116888733599748534----6-888677--9888740367524102001
Q gi|254780434|r 18 PEIAHHLSIVALK-SGLLSFF-PVHSDPRLNTKVAGISLSNPLGMAA----G-YDKNAE--VPIELLKLGFGFVEIGTVT 88 (362)
Q Consensus 18 pe~ah~~~~~~~~-~~~~~~~-~~~~~~~L~~~~~Gl~~~nPiglAa----G-~dk~~~--~~~~l~~~G~G~v~~ktit 88 (362)
T Consensus 18 ~e~t~~~N~~af~~~~l~pr~L~dv~~~d~st~~lG~~~~~Pi~iap~g~~~l~~~~ge~~lAraA~~~gi~~~ls-s~~ 96 (301)
T pfam01070 18 DEITLRRNRAAFDRIRLRPRVLRDVSDRDTSTTLLGQRLSLPFGIAPTGMQGLAHPDGELALARAAAAAGIPFVLS-TVA 96 (301)
T ss_pred CCHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEECCCCCCCCEEECCCCHHHHCCCCHHHHHHHHHHHHCCCEECC-CCC
T ss_conf 5299999999998370676445788778884357883167876787401022137645899999999835870046-876
Q ss_pred CCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 36878998862688425554100002477777889998764100012100011045424678877655542067552698
Q gi|254780434|r 89 PHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVFSRLSKIQPTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFT 168 (362)
Q Consensus 89 ~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~~~l~~~~~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iE 168 (362)
T Consensus 97 ----------------------------~~~~e~i~----~~~-~~~~~fQly~~~-d~~~~~~~i~ra~~a--g~~al~ 140 (301)
T pfam01070 97 ----------------------------STSLEEVA----AAA-GGPLWFQLYVPK-DRELTEDLLERAEAA--GYKALV 140 (301)
T ss_pred ----------------------------CCCHHHHH----HHC-CCCEEEEEEECC-CHHHHHHHHHHHHHC--CCCEEE
T ss_conf ----------------------------55527889----857-997689987458-889999999999974--999799
Q ss_pred EECCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE--CCCCCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 303336532211--00002343211112244455655312688517865--05777748889999987644982999806
Q gi|254780434|r 169 INISSPNTPGLR--SLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLK--ISPDLSEEELDDIAVEVLSHKVEGIIVSN 244 (362)
Q Consensus 169 iNiSCPNt~g~~--~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vK--LsPd~~~~~i~~ia~~a~~~g~dGiv~~N 244 (362)
T Consensus 141 ltvD~~~~-g~r~~d~r~~~----~i---------~~l~~~~~~PvivKGI~s--------~eDA~~a~~~Gv~~I~VSn 198 (301)
T pfam01070 141 LTVDTPVL-GNRERDLRNGD----DL---------AWLRDQWKGPLVLKGILS--------PEDAKRAVEAGVDGIVVSN 198 (301)
T ss_pred EECCCCCC-CCCCCCCCCHH----HH---------HHHHHHCCCCEEEECCCC--------HHHHHHHHHCCCCEEEECC
T ss_conf 97268765-77853204399----99---------999986699889982899--------9999999985999999649
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCC--
Q ss_conf 655532345775446322113564542468999999974089748999678899999999998399975452787706--
Q gi|254780434|r 245 TTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMIYE-- 322 (362)
Q Consensus 245 T~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~~-- 322 (362)
T Consensus 199 HG-G---------RqlD~-------~~~t~~~L~eI~~~v~~~~~i~~DGGIR~G~DV~KAlALGA~~V~iGRp~l~ala 261 (301)
T pfam01070 199 HG-G---------RQLDG-------APATIDALPEIVAAVGGRIPVLVDGGIRRGTDVLKALALGADAVLLGRPFLYGLA 261 (301)
T ss_pred CC-C---------CCCCC-------CCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEECHHHHHHHH
T ss_conf 98-5---------44688-------8679999999999856774899638747626899999808986655689999999
Q ss_pred --CH----HHHHHHHHHHHHHHHHCCCCCHHHHHCC
Q ss_conf --97----8999999999999998389977896169
Q gi|254780434|r 323 --GI----SLPKRIIQGLSDFLNKENEVNFENIRGS 352 (362)
Q Consensus 323 --Gp----~~~~~I~~~L~~~l~~~G~~si~e~iG~ 352 (362)
T Consensus 262 ~~G~~Gv~~~l~~l~~El~~~M~l~G~~~i~~l~~~ 297 (301)
T pfam01070 262 AGGEAGVAHALEILRDELERTMALLGCTSIADLTPS 297 (301)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHH
T ss_conf 657999999999999999999998589997895998