RPSBLAST alignment for GI: 254780434 and conserved domain: TIGR01036

>gnl|CDD|130108 TIGR01036, pyrD_sub2, dihydroorotate dehydrogenase, subfamily 2. The subfamilies 1 and 2 share extensive homology, particularly toward the C-terminus. This subfamily has a longer N-terminal region. Length = 335

 Score =  320 bits (823), Expect = 2e-88
 Identities = 151/332 (45%), Positives = 210/332 (63%), Gaps = 10/332 (3%)

Query: 11  RGLTHLDPEIAHHLSIVALKSGLLSFF------PVHSDPRLNTKVAGISLSNPLGMAAGY 64
           + L  LDPE AH L+   L+ G  + F         +   L   V G+   NPLG+AAG+
Sbjct: 6   KLLFLLDPESAHELTFQFLRLGTGTPFLALLRSLFGASDPLEVTVLGLKFPNPLGLAAGF 65

Query: 65  DKNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVF 124
           DK+ E    L  +GFGF+EIGTVTP PQ GNPRPR+FRL +D A+IN++GFNN G   + 
Sbjct: 66  DKDGEAIDALGAMGFGFLEIGTVTPKPQPGNPRPRLFRLIEDEALINRMGFNNHGADVLV 125

Query: 125 SRLSKIQPTSPIGINLGANKD--SKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSL 182
            RL + +   PIGIN+G NKD  S+D   DY + +R    +A Y  +N+SSPNTPGLR L
Sbjct: 126 ERLKRARYKGPIGINIGKNKDTPSEDAKEDYAACLRKLGPLADYLVVNVSSPNTPGLRDL 185

Query: 183 QKKKNLERLLIHVMQTREEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIV 242
           Q K  L  LL  V Q  E++ ++    VP+ +KI+PDL+E +L+DIA  ++   ++G+I 
Sbjct: 186 QYKAELRDLLTAVKQ--EQDGLRRVHRVPVLVKIAPDLTESDLEDIADSLVELGIDGVIA 243

Query: 243 SNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDA 302
           +NTT+SR  VQ   N ++ GGLSG PL  KST  + ++   +  ++ IIG GGISS +DA
Sbjct: 244 TNTTVSRSLVQGPKNSDETGGLSGKPLQDKSTEIIRRLYAELQGRLPIIGVGGISSAQDA 303

Query: 303 LDKIMAGANLIQLYSAMIYEGISLPKRIIQGL 334
           L+KI AGA+L+Q+YS  IY G  L K I++ +
Sbjct: 304 LEKIRAGASLLQIYSGFIYWGPPLVKEIVKEI 335