RPSBLAST alignment for GI: 254780434 and conserved domain: TIGR01037
>gnl|CDD|130109 TIGR01037, pyrD_sub1_fam, dihydroorotate dehydrogenase (subfamily 1) family protein. This family includes subfamily 1 dihydroorotate dehydrogenases while excluding the closely related subfamily 2 (TIGR01036). This family also includes a number of uncharacterized proteins and a domain of dihydropyrimidine dehydrogenase. The uncharacterized proteins might all be dihydroorotate dehydrogenase. Length = 300
Score = 82.1 bits (203), Expect = 2e-16
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 40/322 (12%)
Query: 45 LNTKVAGISLSNPLGMAAG-YDKNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRL 103
L ++ GI NPL +A+G E + + G G V ++ P+ G P +
Sbjct: 1 LEVELFGIRFKNPLILASGIMGSGVESLRRIDRSGAGAVVTKSIGLEPRPGYRNPTIVET 60
Query: 104 TKDRAIINKLGFNNAGYHTVFSRLSKI--QPTSPIGINLGANKDSKDFILDYVSGIRLFF 161
++N +G N G L + + +P+ ++ ++F + +
Sbjct: 61 PC--GMLNAIGLQNPGVEAFLEELKPVREEFPTPLIASV-YGSSVEEFA-EVAEKLEKAP 116
Query: 162 TIASYFTINISSPN--TPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLKISPD 219
+ +N+S P+ G+ Q + ++ + +K VP+F K+SP+
Sbjct: 117 PYVDAYELNLSCPHVKGGGIAIGQDPELSADVV---------KAVKDKTDVPVFAKLSPN 167
Query: 220 LSEEELDDIAVEVLSHKVEGIIVSNTTL-------SRKGVQCSDNHEQDGGLSG---SPL 269
+++ + +IA +G+ + NT + K + + + GGLSG P+
Sbjct: 168 VTD--ITEIAKAAEEAGADGLTLINTLRGMKIDIKTGKPILAN----KTGGLSGPAIKPI 221
Query: 270 FLKSTIALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMIYEGISLPKR 329
L+ + K+ I IIG GGI+S +DAL+ +MAGA+ +Q+ +A+ Y G K+
Sbjct: 222 ALRMVYDVYKMVD-----IPIIGVGGITSFEDALEFLMAGASAVQVGTAVYYRG-FAFKK 275
Query: 330 IIQGLSDFLNKENEVNFENIRG 351
II+GL FL E + E + G
Sbjct: 276 IIEGLIAFLKAEGFTSIEELIG 297