RPSBLAST alignment for GI: 254780434 and conserved domain: cd02940

>gnl|CDD|73382 cd02940, DHPD_FMN, Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain. DHPD catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines. DHPD contains two FAD, two FMN, and eight [4Fe-4S] clusters, arranged in two electron transfer chains that pass the dimer interface twice. Two of the Fe-S clusters show a hitherto unobserved coordination involving a glutamine residue.. Length = 299
 Score = 73.0 bits (179), Expect = 1e-13
 Identities = 68/314 (21%), Positives = 125/314 (39%), Gaps = 40/314 (12%)

Query: 45  LNTKVAGISLSNPLGMAAG-YDKNAEVPIELLKLGFGFVEIGTVTP-HPQAGNPRPRVFR 102
           L+    GI   NP G+A+     +  +     + G+G     T+        N  PR+ R
Sbjct: 2   LSVTFCGIKFPNPFGLASAPPTTSYPMIRRAFEAGWGGAVTKTLGLDKDIVTNVSPRIAR 61

Query: 103 LTKDRAIINKLGFNN---------AGYHTVFSRLSKIQPTSPI--GINLGANKDSKDFIL 151
           L        ++GFNN           +      L K  P   +   I    NK+    + 
Sbjct: 62  LRTSGR--GQIGFNNIELISEKPLEYWLKEIRELKKDFPDKILIASIMCEYNKEDWTELA 119

Query: 152 DYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVP 211
             V         A    +N S P+    R +      +  L+     R    ++    +P
Sbjct: 120 KLVEE-----AGADALELNFSCPHGMPERGMGAAVGQDPELVE-EICRW---VREAVKIP 170

Query: 212 IFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQ--------CSDNHEQDGG 263
           +  K++P++++  + +IA        +G+   NT  S  GV           +     GG
Sbjct: 171 VIAKLTPNITD--IREIARAAKEGGADGVSAINTVNSLMGVDLDGTPPAPGVEGKTTYGG 228

Query: 264 LSGS---PLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMI 320
            SG    P+ L+   A+++I +   P + I G GGI S +DA + ++ GA+++Q+ +A++
Sbjct: 229 YSGPAVKPIALR---AVSQIARAPEPGLPISGIGGIESWEDAAEFLLLGASVVQVCTAVM 285

Query: 321 YEGISLPKRIIQGL 334
            +G ++   +  GL
Sbjct: 286 NQGFTIVDDMCTGL 299