HHsearch alignment for GI: 254780435 and conserved domain: COG1680
>COG1680 AmpC Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms].
Probab=97.84 E-value=5.6e-05 Score=49.82 Aligned_cols=134 Identities=22% Similarity=0.191 Sum_probs=75.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHH---HHHCC--C--------CCCCCCC--------CH----
Q ss_conf 3998307526989999999985135777787660351787---72003--6--------6443451--------01----
Q gi|254780435|r 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN---ASEYP--P--------SNSTFKK--------GS---- 100 (336)
Q Consensus 46 n~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~---~~~~~--~--------s~~~l~~--------g~---- 100 (336)
T Consensus 84 ~~~t~f~i~S~TK~~ta~~i~~LveeG~l~lddpV~~ylP~~~~~~~~~~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~ 163 (390)
T COG1680 84 TPPTVFRIASVTKSFTATLLGKLVEEGKLDLDDPVSKYLPEGKDPATGGAPITLRDLLTHTSGLPFPEDYAYAVPKRLVQ 163 (390)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99854675101799999999999986997610448875786445455767763999955447998744443232244322
Q ss_pred -HHHHHHHHHHHHH--H--------HHHHHHHHHH---HHHC-CCHHHHHHHHHHHHHHCCCCCCEEECCCCCC------
Q ss_conf -2346777676777--4--------2358999997---6401-1178999999999987098353441235764------
Q gi|254780435|r 101 -TMTLDNALKLLIV--K--------SANDIAVAIA---ESLC-KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------ 159 (336)
Q Consensus 101 -~~tv~dll~~~li--~--------S~Ndaa~aLA---e~i~-Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~------ 159 (336)
T Consensus 164 ~~~~~~~~l~~~~~~~~~~pG~~~~Ysn~~~~lLg~ive~v~G~~~~~~~~--~~i~~PLGm~~t~~~~~~~~~~~~~~~ 241 (390)
T COG1680 164 DQEAALEYLASLPPELAPPPGTAFAYSNSNYGLLGAILERVTGKPLEELLR--ERIFEPLGMTSTGFGPPPAPQARLAAG 241 (390)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCHHHHHH--HHHHCCCCCCCCCCCCCCCHHCCCCCC
T ss_conf 068899999844444678998733452544999999999872998999999--987576788765555770021011113
Q ss_pred -------------------------CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf -------------------------6222256999999989876312
Q gi|254780435|r 160 -------------------------QHGHYTTARDMAILSWRIKTDF 181 (336)
Q Consensus 160 -------------------------~~~~~tTa~Dla~l~~~~~~~~ 181 (336)
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~t~~D~~~~~~~~l~~~ 288 (390)
T COG1680 242 LAPAVGGGGEVDDPGTFGLGSALAGAGGLFSTARDMARFGQALLNGG 288 (390)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCC
T ss_conf 46665777642566654556655565636631652778999983866