HHsearch alignment for GI: 254780435 and conserved domain: COG2027
>COG2027 DacB D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane].
Probab=98.33 E-value=3.9e-05 Score=50.79 Aligned_cols=143 Identities=14% Similarity=0.075 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHH-HCCC--CCCEEECCCCCCCCCCCCCHHHH
Q ss_conf 1234677767677742358999997640111------7899999999998-7098--35344123576462222569999
Q gi|254780435|r 100 STMTLDNALKLLIVKSANDIAVAIAESLCKT------EKKFVQHMNNTSK-NLGL--SATHFMNAHGVVQHGHYTTARDM 170 (336)
Q Consensus 100 ~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs------~~~Fv~~MN~~a~-~lG~--~~T~f~n~~Gl~~~~~~tTa~Dl 170 (336)
T Consensus 291 ~S~PL~~lLk~m~k~SnN~~Ae~L~~~ig~~~~~~gs~~~~~~~v~~~l~~~~GId~~~~vL~DGSGL-Sr~Nritpr~l 369 (470)
T COG2027 291 QSAPLSQLLKDMNKYSDNLMAEALFRAIGGAIKRPGSVSAAADAVRQILLQRAGIDLAGLVLADGSGL-SRDNRITPRTL 369 (470)
T ss_pred CCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC-CHHCCCCHHHH
T ss_conf 17888999999986150899999999845344787426677899999999873988566487418988-71102298999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEEECCHHHHHEEEEEEE-ECCEEEEEEEECC
Q ss_conf 999898763123311012302000174478601456566897115332124112000234564-2886899998378
Q gi|254780435|r 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI-QGDQSLIAVILGA 246 (336)
Q Consensus 171 a~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~N~N~ll~~~~gv~G~KTG~t~~AG~~lv~~a~-~~g~~li~Vvlg~ 246 (336)
T Consensus 370 ~~~Lq~~~~-~~~~~~~~dsLPIAG~~GTL~~R~~~~-~~~G~v~aKTGTL~gV-~aLaGyv~~~~g~~l~Fai~~N 443 (470)
T COG2027 370 VQLLQAAAQ-SPAAAALIDSLPIAGVDGTLRNRLRGT-GAAGKVRAKTGTLTGV-SALAGYVTTASGRKLAFAIILN 443 (470)
T ss_pred HHHHHHHHC-CCHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCCEEEEECCCCCC-HHHEEEEECCCCCEEEEEEECC
T ss_conf 999999872-971778998477377787501314467-8787178863123240-4111068768898899999658