HHsearch alignment for GI: 254780435 and conserved domain: COG2602

Probab=94.57  E-value=0.35  Score=26.68  Aligned_cols=204  Identities=15%  Similarity=0.111  Sum_probs=117.0

Q ss_pred             EEEEEEC-CCCEEEE-EECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf             6899997-8962977-6439983075269899999999851357777876603517877200366443451012346777
Q gi|254780435|r   30 YYTLLDT-NTGHVIA-ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA  107 (336)
Q Consensus        30 ~~i~~d~-~tG~iL~-~kn~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~~~~s~~~l~~g~~~tv~dl  107 (336)
T Consensus        31 tfvlyd~~~~~~~i~n~~~~~qr~sPaSTfKI~~sLigld---~Gvl~d~~~~v~~-----wd~~~~~f---~~W~qd~d   99 (254)
T COG2602          31 TFVLYDDKAMGYSIYNEERAKQRFSPASTFKIALSLIGLD---AGVLSDEDTPVLL-----WDGKIRWF---ESWNQDQD   99 (254)
T ss_pred             EEEEEECCCCCEEEECHHHHCCCCCCHHHHHHHHHHHHCC---CCCCCCCCCEEEE-----ECCCCCCC---HHHCCCCC
T ss_conf             4999975456324633355368668468999999974114---5731358765551-----07775634---11215588


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCC-CCCCCCCHHHHHHHHHHHHHHH-HHHH
Q ss_conf             6767774235899999764011178999999999987098353441235764-6222256999999989876312-3311
Q gi|254780435|r  108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDF-PQYM  185 (336)
Q Consensus       108 l~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~-~~~~~tTa~Dla~l~~~~~~~~-p~~~  185 (336)
T Consensus       100 l~~amk~Svvwy~q~iar~ig------~ek~~aylk~l~YGN~dis~~~~~Wl~~sLkIS~~EQv~fL~rL~~~~LPFs~  173 (254)
T COG2602         100 LTSAMKNSVVWYYQEIARAIG------REKMAAYLKQLGYGNQDISGNPGFWLESSLKISPKEQVIFLRRLAQNELPFSA  173 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHCCCCHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCH
T ss_conf             899999987889999999876------89999998875226311058998111366522779999999999746699887


Q ss_pred             CCCCEEECCCCCEEEEECCCCCCC-CCCEEEEEEECCHHHH---HEEEEEEEECCEEEEEEEECC----CCHHHHHHHHH
Q ss_conf             012302000174478601456566-8971153321241120---002345642886899998378----98667899999
Q gi|254780435|r  186 HYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASG---FNIVASAIQGDQSLIAVILGA----LDRNTRNKVSA  257 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~N~N~ll~~-~~gv~G~KTG~t~~AG---~~lv~~a~~~g~~li~Vvlg~----~~~~~r~~~~~  257 (336)
T Consensus       174 ~a~~~----v~~~m~------~~~~~~~~l~GKTG~~~~~~~~~GWfVG~v~~~~~~y~FA~nld~~~~~d~~k~~~i~~  243 (254)
T COG2602         174 KAQDL----VKAIMI------LERGPNWELHGKTGTGIVNTKNLGWFVGWVETNENKYVFATNLDIDGNEDGPKREEITE  243 (254)
T ss_pred             HHHHH----HHHHHH------HHCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHH
T ss_conf             89999----987770------13089769984044465378875059999996893799999612577775467788999


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780435|r  258 SLL  260 (336)
Q Consensus       258 ~Ll  260 (336)
T Consensus       244 ~~L  246 (254)
T COG2602         244 AIL  246 (254)
T ss_pred             HHH
T ss_conf             999