HHsearch alignment for GI: 254780435 and conserved domain: PRK09506
>PRK09506 mrcB penicillin-binding protein 1b; Reviewed.
Probab=97.83 E-value=0.0025 Score=39.74 Aligned_cols=228 Identities=17% Similarity=0.103 Sum_probs=115.9
Q ss_pred EEEEEECCCCEEEEEEC------------CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCE-----EEECH-HHHHCCC
Q ss_conf 68999978962977643------------998307526989999999985135777787660-----35178-7720036
Q gi|254780435|r 30 YYTLLDTNTGHVIAENY------------PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP-----ITISK-NASEYPP 91 (336)
Q Consensus 30 ~~i~~d~~tG~iL~~kn------------~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~-----v~vs~-~~~~~~~ 91 (336)
T Consensus 471 A~VviD~~TG~V~AmVGG~d~~~sgfNRA~~A~RQ~GSt~KPfvY~aAL~~~--~~~~~~T~l~D~Pi~~~~~~G~~W~P 548 (839)
T PRK09506 471 AMVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQP--DKYRLNTWIADAPISLRQPNGQVWSP 548 (839)
T ss_pred EEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCC--CCCCCCCEECCCCEEEECCCCCCCCC
T ss_conf 7999978998599997488877667613454677997651189999998667--99777645245354864689874388
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCC-CCCCCCCCCCHHHH
Q ss_conf 64434510123467776767774235899999764011178999999999987098353441235-76462222569999
Q gi|254780435|r 92 SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH-GVVQHGHYTTARDM 170 (336)
Q Consensus 92 s~~~l~~g~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~-Gl~~~~~~tTa~Dl 170 (336)
T Consensus 549 ~Nyd~~~~G~VtLr~----ALa~S~N~paVrL~~~vG------l~~v~~~~~~lGi~~~~~-~~~pSlaLGa~evSplem 617 (839)
T PRK09506 549 QNDDRRYSGRVMLVD----ALTRSMNVPTVNLGMALG------LPAVTDTWIKLGVPKDQL-NPVPAMLLGALNLTPIEV 617 (839)
T ss_pred CCCCCCCCCHHHHHH----HHHHCCCHHHHHHHHHHC------HHHHHHHHHHCCCCCCCC-CCCCCEEECCCCCCHHHH
T ss_conf 648998657121999----998583899999999879------899999999869986668-888673107788889999
Q ss_pred HHHHHHHHHHHHHHHCCCCEEECCC-CCEEEEE----------------------------CCCCC-CCCCC-EEEEEEE
Q ss_conf 9998987631233110123020001-7447860----------------------------14565-66897-1153321
Q gi|254780435|r 171 AILSWRIKTDFPQYMHYFQIKGLEI-KGKKYPN----------------------------TNWAV-GTFLG-ADGMKTG 219 (336)
Q Consensus 171 a~l~~~~~~~~p~~~~~~~~~~~~~-~~~~~~N----------------------------~N~ll-~~~~g-v~G~KTG 219 (336)
T Consensus 618 A~AYatfAN-~G~~~~p~~I~~V~d~~G~vl~~~~p~~~rvis~~~A~l~~~~L~~Vv~~GTgr~l~~~~p~~~vAGKTG 696 (839)
T PRK09506 618 AQAFQTIAS-GGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTG 696 (839)
T ss_pred HHHHHHHHC-CCEECCCEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEECC
T ss_conf 999999975-9877388899999989999883069986503799999999999999865255244662489985147888
Q ss_pred CCHHHHHEEEEEEEECCEEEEEEEECCCCHHH-H---HHHHHHHHHHHHHHCCCCCCC
Q ss_conf 24112000234564288689999837898667-8---999999999998514532023
Q gi|254780435|r 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNT-R---NKVSASLLSMGFYNKTDRKKI 273 (336)
Q Consensus 220 ~t~~AG~~lv~~a~~~g~~li~Vvlg~~~~~~-r---~~~~~~Ll~~~f~~f~~~~~~ 273 (336)
T Consensus 697 TTnd~rD--aWFvG~T~~~v~~VWvG~DdN~p~~ltG~sgAl~iw~~~m~~~~~~~l~ 752 (839)
T PRK09506 697 TTNNNVD--TWFAGIDGSEVTITWVGRDNNQPTKLYGASGAMTIYQRYLANQTPTPLN 752 (839)
T ss_pred CCCCCEE--EEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 8799821--6998536995999998256899878864132799999999736997766