HHsearch alignment for GI: 254780435 and conserved domain: pfam00905

>pfam00905 Transpeptidase Penicillin binding protein transpeptidase domain. The active site serine is conserved in all members of this family.
Probab=98.71  E-value=3e-06  Score=57.53  Aligned_cols=136  Identities=18%  Similarity=0.099  Sum_probs=85.4

Q ss_pred             EEEEEECCCCEEEEEECC-----------------CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCC
Q ss_conf             689999789629776439-----------------983075269899999999851357777876603517877200366
Q gi|254780435|r   30 YYTLLDTNTGHVIAENYP-----------------DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS   92 (336)
Q Consensus        30 ~~i~~d~~tG~iL~~kn~-----------------~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~~~~s   92 (336)
T Consensus         2 a~Vv~d~~TG~IlAm~~~p~~~~~~~~~~~~n~a~~~~~~PGStfKp~~~aaaLe---~g~~~~~~~~~~~~~~~-~~~~   77 (296)
T pfam00905         2 SAVVLDPKTGEVLAMAGKPSYDPNRDKEPLRNRAVQDVYEPGSTFKIFTALAALD---NGILKPEETFDDWPGLP-VGGY   77 (296)
T ss_pred             EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCC-CCCC
T ss_conf             5999989999299998689889787664222187668658848999999999998---79988761114776434-7993


Q ss_pred             CC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC-EEECC---CCC-CC----
Q ss_conf             44---34510123467776767774235899999764011178999999999987098353-44123---576-46----
Q gi|254780435|r   93 NS---TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT-HFMNA---HGV-VQ----  160 (336)
Q Consensus        93 ~~---~l~~g~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T-~f~n~---~Gl-~~----  160 (336)
T Consensus        78 ~~~n~~~~~~G~~tl~~----al~~S~N~~~~~l~~~lg------~~~~~~~~~~~G~g~~~~~~~~~e~~g~~~~~~~~  147 (296)
T pfam00905        78 TIKDWNQDGSGTITLRE----ALEYSSNWYFQQLALKLG------KDKLRDYLKKFGYGNKTGIGLPGESAGILPPRYRG  147 (296)
T ss_pred             CEECCCCCCCCCCCHHH----HHHHCCCHHHHHHHHHCC------CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             22468999887554999----998509677899999708------47899999971888776888864435667775543


Q ss_pred             ---------CCCCCCHHHHHHHHHHHHH
Q ss_conf             ---------2222569999999898763
Q gi|254780435|r  161 ---------HGHYTTARDMAILSWRIKT  179 (336)
Q Consensus       161 ---------~~~~tTa~Dla~l~~~~~~  179 (336)
T Consensus       148 ~~~~~~~G~G~~~vTplq~a~aya~iAN  175 (296)
T pfam00905       148 DGATTAWGQGSLTITPLQQAQAYATIAN  175 (296)
T ss_pred             CHHHEEEECCCCCCCHHHHHHHHHHHHC
T ss_conf             1010101067662269999999999871